View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5174-Insertion-5 (Length: 167)

Name: NF5174-Insertion-5
Description: NF5174
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5174-Insertion-5
NF5174-Insertion-5
[»] chr5 (24 HSPs)
chr5 (8-167)||(27911077-27911236)
chr5 (8-167)||(658663-658822)
chr5 (8-167)||(25806106-25806265)
chr5 (11-167)||(10750343-10750499)
chr5 (11-167)||(15356327-15356483)
chr5 (11-167)||(23665691-23665847)
chr5 (15-167)||(31543378-31543530)
chr5 (11-167)||(34478897-34479053)
chr5 (11-167)||(6745713-6745869)
chr5 (11-167)||(18467329-18467485)
chr5 (8-167)||(20043630-20043788)
chr5 (11-167)||(29720952-29721108)
chr5 (11-164)||(9788656-9788809)
chr5 (11-167)||(26171344-26171500)
chr5 (11-167)||(40380693-40380849)
chr5 (8-78)||(18510889-18510959)
chr5 (11-167)||(16545014-16545173)
chr5 (11-167)||(534336-534492)
chr5 (11-102)||(16407977-16408068)
chr5 (11-167)||(42427866-42428022)
chr5 (92-146)||(18510957-18511011)
chr5 (34-151)||(13694599-13694715)
chr5 (34-93)||(33790769-33790828)
chr5 (11-93)||(27449253-27449335)
[»] chr7 (26 HSPs)
chr7 (8-167)||(28486219-28486378)
chr7 (8-167)||(7471456-7471615)
chr7 (11-167)||(38394640-38394796)
chr7 (11-167)||(36104-36260)
chr7 (11-167)||(7351129-7351285)
chr7 (11-167)||(1048767-1048923)
chr7 (11-167)||(44725229-44725385)
chr7 (11-167)||(22135457-22135613)
chr7 (11-167)||(40550484-40550640)
chr7 (8-167)||(4295416-4295575)
chr7 (8-167)||(21678713-21678872)
chr7 (11-167)||(7093939-7094095)
chr7 (11-167)||(13289977-13290133)
chr7 (11-167)||(24749241-24749397)
chr7 (11-167)||(31159180-31159322)
chr7 (11-167)||(18391606-18391762)
chr7 (11-167)||(24816848-24816997)
chr7 (11-167)||(6593968-6594124)
chr7 (11-167)||(47675572-47675728)
chr7 (8-86)||(20298050-20298128)
chr7 (11-167)||(6570564-6570720)
chr7 (11-154)||(26213387-26213530)
chr7 (11-153)||(48489996-48490138)
chr7 (11-167)||(6047138-6047294)
chr7 (11-93)||(16884358-16884440)
chr7 (11-93)||(24261897-24261979)
[»] chr1 (26 HSPs)
chr1 (8-167)||(6996229-6996388)
chr1 (11-167)||(51750682-51750838)
chr1 (8-167)||(31736951-31737110)
chr1 (15-167)||(16226813-16226965)
chr1 (8-167)||(50078269-50078428)
chr1 (11-167)||(28203177-28203333)
chr1 (11-145)||(28841089-28841223)
chr1 (11-167)||(20300776-20300932)
chr1 (11-167)||(51758179-51758335)
chr1 (11-167)||(27338611-27338767)
chr1 (15-167)||(47178007-47178159)
chr1 (11-167)||(25250759-25250915)
chr1 (8-167)||(28997730-28997889)
chr1 (8-167)||(29003446-29003605)
chr1 (8-161)||(16429599-16429752)
chr1 (11-167)||(8348543-8348699)
chr1 (8-167)||(31657781-31657940)
chr1 (11-167)||(3805616-3805772)
chr1 (57-167)||(31424546-31424656)
chr1 (11-167)||(13127213-13127369)
chr1 (11-167)||(3157240-3157396)
chr1 (11-145)||(28222856-28222990)
chr1 (11-167)||(50168785-50168940)
chr1 (11-167)||(16456294-16456451)
chr1 (11-93)||(41397670-41397752)
chr1 (68-151)||(13784799-13784882)
[»] chr4 (28 HSPs)
chr4 (8-167)||(22802212-22802371)
chr4 (11-167)||(22134095-22134251)
chr4 (15-167)||(16933630-16933782)
chr4 (11-167)||(22782215-22782371)
chr4 (8-167)||(14788908-14789067)
chr4 (8-167)||(36920973-36921132)
chr4 (8-167)||(36378983-36379142)
chr4 (8-165)||(18536979-18537136)
chr4 (15-167)||(11008050-11008202)
chr4 (15-167)||(22046197-22046349)
chr4 (8-164)||(47563457-47563613)
chr4 (8-167)||(16454002-16454161)
chr4 (11-167)||(12395338-12395493)
chr4 (11-167)||(12400300-12400455)
chr4 (15-167)||(9175954-9176109)
chr4 (11-167)||(5136669-5136825)
chr4 (11-150)||(3578172-3578311)
chr4 (11-104)||(12402574-12402667)
chr4 (11-167)||(7123285-7123441)
chr4 (11-167)||(8393996-8394151)
chr4 (11-167)||(52094797-52094953)
chr4 (13-167)||(5872392-5872546)
chr4 (11-167)||(12743363-12743519)
chr4 (11-154)||(10113570-10113713)
chr4 (50-150)||(26558303-26558403)
chr4 (13-151)||(5207100-5207238)
chr4 (110-144)||(5350501-5350535)
chr4 (11-93)||(9224978-9225060)
[»] chr3 (42 HSPs)
chr3 (7-167)||(3315306-3315466)
chr3 (8-167)||(53917149-53917308)
chr3 (11-167)||(456531-456687)
chr3 (11-167)||(6065271-6065427)
chr3 (11-167)||(43226701-43226857)
chr3 (8-167)||(42990923-42991082)
chr3 (15-167)||(5192274-5192426)
chr3 (11-167)||(5898033-5898189)
chr3 (11-167)||(10957801-10957957)
chr3 (15-167)||(11168725-11168877)
chr3 (11-167)||(18098649-18098804)
chr3 (11-167)||(23634070-23634225)
chr3 (11-165)||(28101486-28101640)
chr3 (11-167)||(1619952-1620108)
chr3 (8-167)||(43422943-43423102)
chr3 (11-131)||(4309988-4310108)
chr3 (11-167)||(23199573-23199729)
chr3 (11-167)||(37407266-37407422)
chr3 (8-167)||(27421262-27421421)
chr3 (11-167)||(10209778-10209934)
chr3 (34-167)||(6717090-6717223)
chr3 (11-167)||(4600154-4600310)
chr3 (11-167)||(53597850-53598006)
chr3 (11-153)||(22834443-22834585)
chr3 (11-167)||(5259757-5259913)
chr3 (11-167)||(10059044-10059200)
chr3 (13-167)||(9635560-9635714)
chr3 (11-153)||(25634514-25634657)
chr3 (11-167)||(10056822-10056978)
chr3 (11-167)||(10061266-10061422)
chr3 (11-167)||(10063488-10063644)
chr3 (11-167)||(10065710-10065866)
chr3 (11-129)||(7769218-7769335)
chr3 (11-167)||(23409766-23409922)
chr3 (34-167)||(7762848-7762981)
chr3 (11-167)||(29811446-29811602)
chr3 (8-167)||(15830673-15830831)
chr3 (11-82)||(32891752-32891823)
chr3 (11-93)||(8516525-8516607)
chr3 (11-93)||(32479771-32479853)
chr3 (108-165)||(31116339-31116396)
chr3 (112-167)||(1312598-1312653)
[»] scaffold0004 (1 HSPs)
scaffold0004 (8-167)||(80511-80670)
[»] chr2 (9 HSPs)
chr2 (11-167)||(36560619-36560775)
chr2 (8-167)||(6263629-6263788)
chr2 (11-167)||(21520172-21520328)
chr2 (11-167)||(35217448-35217604)
chr2 (16-167)||(19503819-19503970)
chr2 (15-167)||(22405412-22405564)
chr2 (11-164)||(34574636-34574789)
chr2 (107-167)||(16549103-16549163)
chr2 (34-93)||(19348731-19348790)
[»] chr8 (15 HSPs)
chr8 (15-167)||(27827685-27827837)
chr8 (11-167)||(18811408-18811564)
chr8 (15-167)||(43080302-43080454)
chr8 (8-167)||(41383353-41383512)
chr8 (11-167)||(15069267-15069423)
chr8 (11-167)||(31577771-31577927)
chr8 (8-167)||(21481196-21481355)
chr8 (11-167)||(34255941-34256097)
chr8 (11-153)||(5591476-5591618)
chr8 (11-93)||(17848300-17848382)
chr8 (11-165)||(4732237-4732391)
chr8 (11-93)||(10684838-10684920)
chr8 (68-167)||(17848189-17848288)
chr8 (34-93)||(35744844-35744903)
chr8 (116-167)||(13985406-13985457)
[»] scaffold1674 (1 HSPs)
scaffold1674 (8-167)||(927-1086)
[»] scaffold0005 (1 HSPs)
scaffold0005 (8-167)||(50663-50822)
[»] scaffold1899 (1 HSPs)
scaffold1899 (15-167)||(269-421)
[»] scaffold0140 (1 HSPs)
scaffold0140 (11-167)||(22771-22927)
[»] chr6 (21 HSPs)
chr6 (15-167)||(26932045-26932197)
chr6 (11-167)||(33309534-33309690)
chr6 (15-167)||(26067877-26068029)
chr6 (8-167)||(17012708-17012867)
chr6 (8-167)||(26944169-26944328)
chr6 (8-136)||(3395072-3395200)
chr6 (8-167)||(3631418-3631577)
chr6 (8-112)||(15534077-15534181)
chr6 (11-167)||(25462943-25463099)
chr6 (11-167)||(5408504-5408660)
chr6 (11-167)||(5412829-5412985)
chr6 (11-151)||(12936727-12936867)
chr6 (16-167)||(12157896-12158047)
chr6 (11-165)||(16553255-16553409)
chr6 (11-165)||(16629811-16629965)
chr6 (11-167)||(34165461-34165617)
chr6 (71-167)||(11137216-11137312)
chr6 (68-151)||(12911093-12911176)
chr6 (34-131)||(30443974-30444071)
chr6 (11-130)||(16651550-16651669)
chr6 (11-53)||(12911051-12911093)
[»] scaffold0025 (1 HSPs)
scaffold0025 (11-167)||(72995-73151)
[»] scaffold0011 (1 HSPs)
scaffold0011 (11-167)||(34195-34351)
[»] scaffold0133 (1 HSPs)
scaffold0133 (8-167)||(26365-26524)
[»] scaffold0016 (1 HSPs)
scaffold0016 (11-167)||(115180-115336)
[»] scaffold0127 (1 HSPs)
scaffold0127 (97-167)||(12439-12509)
[»] scaffold0197 (1 HSPs)
scaffold0197 (11-93)||(14883-14965)
[»] scaffold0355 (1 HSPs)
scaffold0355 (7-86)||(458-537)
[»] scaffold0028 (1 HSPs)
scaffold0028 (11-93)||(149529-149611)


Alignment Details
Target: chr5 (Bit Score: 132; Significance: 7e-69; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 132; E-Value: 7e-69
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 27911236 - 27911077
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||| ||    
T  27911236 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcagttgattcctttgcta 27911137  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||    
T  27911136 cttctctcaaaactttatctccgaggcacaagacaatggcactcctggccttgtccacca 27911077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 658822 - 658663
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||| ||    
T  658822 taaagttgttgctttaggacttgccgatgagccaaagactttgtcatatacaaatattcgaactttgaccacatcgatgtcgcggttggttcctttgcta 658723  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||    
T  658722 cttctctcaaaactttatccccgaggcacaagacaatggcactcctgaccttgtccacca 658663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 25806265 - 25806106
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||||||| ||| |     
T  25806265 taaagttgttgctttaggactttccaatgagccaaagactttgtaatatacaaatattcgaactttgaccacatcgatgctgcggttgtttccattgctg 25806166  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||| ||||||||| |||||||||| |||||||||||||||||| |||||||||||    
T  25806165 cttctctcgaaactttatacccgaggcacaagacaatggcactcctggccttgtccacca 25806106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 109; E-Value: 4e-55
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 10750499 - 10750343
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| |||||||  |||||    
T  10750499 agttgttgctttaggaattgccgatgagccaaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttcctactt 10750400  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||||||| ||||||  |||||||||| |||||||||||    
T  10750399 ctctcaaaactttatccccgaggcacaagacaacagcactcctggccttgtccacca 10750343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 109; E-Value: 4e-55
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 15356327 - 15356483
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||| |||| ||||||| ||| |||||||||||||||| |||||||| |||||    
T  15356327 agttgttgctttaggaattgccgatgagccaaagactttgtcatatacaaagattccaactttgcccatatcgatgccgcggttgcttcctttgctactt 15356426  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||||||| |||||| |||||||| || |||||||||||    
T  15356427 ctctcaaaactttatccccgaggcacaagacaacggcactccgggccttgtccacca 15356483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 109; E-Value: 4e-55
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 23665847 - 23665691
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||| |||| ||||||| ||| |||||||||||||||| |||||||| |||||    
T  23665847 agttgttgctttaggaattgccgatgagccaaagactttgtcatatacaaagattccaactttgcccatatcgatgccgcggttgcttcctttgctactt 23665748  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||||||| |||||| |||||||| || |||||||||||    
T  23665747 ctctcaaaactttatccccgaggcacaagacaacggcactccgggccttgtccacca 23665691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 109; E-Value: 4e-55
Query Start/End: Original strand, 15 - 167
Target Start/End: Complemental strand, 31543530 - 31543378
Alignment:
Q  15 gttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttacttctct 114  Q
    |||||||||||| || ||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||| |||||||| |||||||||    
T  31543530 gttgctttaggaattgccgatgagccaaagactttgtcatatacaaagattctaactttgcccacatcgatgtcgcggttgcttcctttgctacttctct 31543431  T
Q  115 caaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||| |||||| ||||||||||| |||||||||||    
T  31543430 caaaactttatccccgaggcacaagacaacggcactcctggccttgtccacca 31543378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 109; E-Value: 4e-55
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 34478897 - 34479053
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| ||  |||||||||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||| |||||||| |||||    
T  34478897 agttgttgctttaggaattgtcgatgagccaaagactttgtcatatacaaagattccaactttgcccacatcgatgtcgcggttgcttcctttgctactt 34478996  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||    
T  34478997 ctctcaaaactttatccccgaggcacaagacaacggcactcctggccttgtccacca 34479053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 6745869 - 6745713
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||| |||  ||||||| |||||| ||||||||||||  |||||||| |||||    
T  6745869 agttgttgctttaggaattgccgatgagccaaagactttgtcatatacaaagattacaactttgcccacattgatgccgcggttcgttcctttgctactt 6745770  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||| ||||    
T  6745769 ctctcaaaactttatccccgaggcacaagacaatggcactcctggccttgtctacca 6745713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 18467485 - 18467329
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||| |||| ||||||| ||| ||||||| |||||||  |||||||| |||||    
T  18467485 agttgttgctttaggaattgccgatgagccaaagactttgtcatatacaaagattccaactttgcccatatcgatgtcgcggttcgttcctttgctactt 18467386  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||| ||||| ||| |||||||||||||||||| |||||||||||    
T  18467385 ctctcaaaactttatctccgagacacaagacaatggcactcctggccttgtccacca 18467329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 92; E-Value: 5e-45
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 20043788 - 20043630
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| |  |||| |||||| | ||    
T  20043788 taaagttgttgctttaggaattgccgatgagccaaagactttgtcatatacaaatattcgaactttgactacatcgatgctg-agttggttccttcgcta 20043690  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | ||||||||| ||||||||||||||||| | |||||||||||| ||| |||||||||||    
T  20043689 catctctcaaatctttatccccgaggcacaaaacaatggcactcttggccttgtccacca 20043630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 85; E-Value: 8e-41
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 29721108 - 29720952
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| || || ||||||||||||||| |||||||||||  |||| |||||||||||||||||||||||||||| |||||| |  || |    
T  29721108 agttgttgcttaaggaattgcctatgagccaaagacttggtcatatacaacgattccaactttgaccacatcgatgccgcggttggttccttcgcgacat 29721009  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | ||||||||||| |||||||||||| |||||||||||||||| | |||||||||||    
T  29721008 ccctcaaaactttgtccccgaggcacaagacaatggcactcctagccttgtccacca 29720952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 11 - 164
Target Start/End: Original strand, 9788656 - 9788809
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| || || ||||||||||||||| |||||||||||  |||| ||||||||||| |||||||||||||||| |||||| |  || |    
T  9788656 agttgttgcttaaggaattgcctatgagccaaagacttggtcatatacaacgattccaactttgaccatatcgatgccgcggttggttccttcgcgacat 9788755  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtcca 164  Q
    | ||||||||||| |||||||||||| |||||||||||||||| | ||||||||    
T  9788756 ccctcaaaactttgtccccgaggcacaagacaatggcactcctagccttgtcca 9788809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 3e-31
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 26171500 - 26171344
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| || || ||||||||||||||| |||||||||||  |||| ||||||||||| ||||||||| |||||| |||||| |  || |    
T  26171500 agttgttgcttaaggaattgcctatgagccaaagacttggtcatatacaacgattccaactttgaccatatcgatgccacggttggttccttcgcgacat 26171401  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | || |||||||| ||| |||||||| |||||||||||||||| | |||||||||||    
T  26171400 cccttaaaactttgtcctcgaggcacaagacaatggcactcctagccttgtccacca 26171344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 7e-29
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 40380849 - 40380693
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| ||  | ||||||||| ||||| |||||||||||  |||| ||||| ||||| |||||||||||||||| |||||| |  || |    
T  40380849 agttgttgcttaaggaattgtctatgagccaacgacttggtcatatacaacgattccaacttagaccatatcgatgccgcggttggttccttcgcgacat 40380750  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | ||||||||||| |||||||||||| |||||||||| ||||| | |||||||||||    
T  40380749 ccctcaaaactttgtccccgaggcacaagacaatggcgctcctcgccttgtccacca 40380693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 8 - 78
Target Start/End: Original strand, 18510889 - 18510959
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgacca 78  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||    
T  18510889 taaagttgttgctttaggacttgccgataagccaaagactttgtcatatacaaatattcgaactttgacca 18510959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 16545173 - 16545014
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagacttt---gtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    ||||||||||| |||| || || ||||||||| |||||    |||||||||||  |||| ||||| ||||| |||||||||||||||| |||||| |  |    
T  16545173 agttgttgcttaaggaattgcctatgagccaacgacttgttggtcatatacaacgattccaacttagaccatatcgatgccgcggttggttccttcgcga 16545074  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | || ||||||||||| |||||||||||| |||||||||| ||||| | |||||||||||    
T  16545073 catccctcaaaactttgtccccgaggcacaagacaatggcgctcctcgccttgtccacca 16545014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 534492 - 534336
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| || || || | |||||||||| |||||||||||  | || ||||||||||||||| | ||||| || | |||||| |  || |    
T  534492 agttgttgcttaaggaattgcctatcaaccaaagacttggtcatatacaatgactccaactttgaccacatcaacgccgccgtaggttccttcgggacat 534393  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | ||||||||||| || ||||||||| |||||||||||||||| | |||||||||||    
T  534392 ccctcaaaactttgtcaccgaggcacaagacaatggcactcctagccttgtccacca 534336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 11 - 102
Target Start/End: Complemental strand, 16408068 - 16407977
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctt 102  Q
    ||||||||||| |||| || || ||||||||||||||| |||||||||||  |||| |||||||| || |||||| ||||||||| ||||||    
T  16408068 agttgttgcttaaggaattgcctatgagccaaagacttggtcatatacaacgattccaactttgatcatatcgattccgcggttggttcctt 16407977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 42427866 - 42428022
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| || || ||||||||||||||| |||||||||||  | |  |||||||||||||||    | ||||| | |||||| |  || |    
T  42427866 agttgttgcttaaggaattgcctatgagccaaagacttggtcatatacaatgactacaactttgaccacatcacctctgcggtaggttccttcgcgacat 42427965  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | ||||||||||| || || |||||| |||||||| |||| || | |||||||||||    
T  42427966 ccctcaaaactttgtcaccaaggcacaagacaatgacacttctagccttgtccacca 42428022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 92 - 146
Target Start/End: Complemental strand, 18511011 - 18510957
Alignment:
Q  92 gttgtttcctttgttacttctctcaaaactttatccccgaggcacgagacaatgg 146  Q
    |||| |||||||| ||||| |||| |||||||||||||||||||| |||||||||    
T  18511011 gttggttcctttgctacttatctcgaaactttatccccgaggcacaagacaatgg 18510957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000002
Query Start/End: Original strand, 34 - 151
Target Start/End: Original strand, 13694599 - 13694715
Alignment:
Q  34 atgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttacttctctcaaaactttatccccgagg 133  Q
    |||||||||||| || |||||||||||  | || || |||||||||||| ||  |||||| | |||||| || |  || |||||||||||||||||||||    
T  13694599 atgagccaaagatttggtcatatacaacgactccaaatttgaccacatcaatatcgcggtaggttccttcgtgatatc-ctcaaaactttatccccgagg 13694697  T
Q  134 cacgagacaatggcactc 151  Q
    ||| ||| ||| ||||||    
T  13694698 cacaagaaaatagcactc 13694715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 33790769 - 33790828
Alignment:
Q  34 atgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggt 93  Q
    |||||||||||| || |||||||||||  | || ||||||| ||||||||||||||||||    
T  33790769 atgagccaaagatttcgtcatatacaatgactccaactttgcccacatcgatgccgcggt 33790828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 27449253 - 27449335
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggt 93  Q
    ||||||||||| | || || || |||||| ||||| ||||||||||||||  | || ||||| | ||||||||||||||||||    
T  27449253 agttgttgcttcaagagttgcctatgagctaaagattttgtcatatacaatgactccaacttcgcccacatcgatgccgcggt 27449335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 128; Significance: 2e-66; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 28486378 - 28486219
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| |     
T  28486378 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttgtttccgttgctg 28486279  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||| |||||||||||||||| |||||||||| ||||||| |||||||||||    
T  28486278 cttctctcaaaattttatccccgaggcacaagacaatggctctcctggccttgtccacca 28486219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 124; E-Value: 4e-64
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 7471456 - 7471615
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||    
T  7471456 taaagttgttgctttaggacttgccgatgagccaaagactttgtcatatacaaagattccaactttgaccacatcgatgccgcggttgtatcctttgtta 7471555  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||| ||||||||| |||||||||| |||||||||| ||||||| |||||||||||    
T  7471556 cttctctcgaaactttattcccgaggcacaagacaatggccctcctggccttgtccacca 7471615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 38394796 - 38394640
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| |||||||| |||||    
T  38394796 agttgttgctttaggaattgccgatgagccaaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttgctactt 38394697  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  38394696 ctctcaaaactttatccccgaggcacaagacaatggcactcctggccttgtccacca 38394640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 36260 - 36104
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || ||||||||| ||||||||||||||||||||| |||| ||||||| |||||||||||||||||| | |||||||| |||||    
T  36260 agttgttgctttaggaattgccgatgagctaaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggtagcttcctttgctactt 36161  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  36160 ctctcaaaactttatccccgaggcacaagacaatggcactcctggccttgtccacca 36104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 7351129 - 7351285
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| |||||||| |||||    
T  7351129 agttgttgctttaggaattgccgatgagccaaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttgctactt 7351228  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    || ||||||||||||||||||||||| |||||| ||||||||||| |||||||||||    
T  7351229 ctttcaaaactttatccccgaggcacaagacaacggcactcctggccttgtccacca 7351285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 109; E-Value: 4e-55
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 1048767 - 1048923
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || |||||| |||||||||||||||||||||||| |||| ||||||| ||| |||||||||||||||| |||||||| |||||    
T  1048767 agttgttgctttaggaattgccgatgcgccaaagactttgtcatatacaaagattccaactttgcccatatcgatgccgcggttgcttcctttgctactt 1048866  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||||||| |||||||||||||||||  |||||||||||    
T  1048867 ctctcaaaactttatccccgaggcacaagacaatggcactcctgaccttgtccacca 1048923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 109; E-Value: 4e-55
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 44725385 - 44725229
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||| |||||||| || ||||||||||||||||||||||||||||||| |||| ||||||| ||| |||||||||||||||| |||||||| |||||    
T  44725385 agttgttactttaggaattgccgatgagccaaagactttgtcatatacaaagattccaactttgcccaaatcgatgccgcggttggttcctttgctactt 44725286  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||||||| |||||||||||||||||  |||||||||||    
T  44725285 ctctcaaaactttatccccgaggcacaagacaatggcactcctgaccttgtccacca 44725229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 22135613 - 22135457
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||| |||| ||||||| ||| || ||||||||||||| |||||||| |||||    
T  22135613 agttgttgctttaggaattgccgatgagccaaagactttgtcatatacaaagattccaactttgcccatattgatgccgcggttgcttcctttgctactt 22135514  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||||||| |||||| |||||||| || |||||||||||    
T  22135513 ctctcaaaactttatccccgaggcacaagacaacggcactccgggccttgtccacca 22135457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 40550640 - 40550484
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||| |||| ||||||| ||| || ||||||||||||| |||||||| |||||    
T  40550640 agttgttgctttaggaattgccgatgagccaaagactttgtcatatacaaagattccaactttgcccatattgatgccgcggttgcttcctttgctactt 40550541  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||||||| |||||| |||||||| || |||||||||||    
T  40550540 ctctcaaaactttatccccgaggcacaagacaacggcactccgggccttgtccacca 40550484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 104; E-Value: 4e-52
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 4295416 - 4295575
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||||||  ||||||||||||||||||| | |||||||||     
T  4295416 taaagttgttgctttaggacttgccgatgagccaaagactttgtcatatacaaagattccaacttttcccacatcgatgccgcggttttatcctttgttg 4295515  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||| ||||||||| || ||||||| |||||||| ||||||||| |||||||||||    
T  4295516 cttctctcgaaactttattcctgaggcacaagacaatgacactcctggccttgtccacca 4295575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 100; E-Value: 9e-50
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 21678872 - 21678713
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    |||||||||||||||||||  | ||||||||||||||||||||| | ||||||| |||| ||||||||||||||||||| |||||||| ||| || ||||    
T  21678872 taaagttgttgctttaggaactgccgatgagccaaagactttgtaaaatacaaagattcgaactttgaccacatcgatgtcgcggttggttctttcgtta 21678773  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||| |||||||||| |||||||||||||| ||| |||||||||||    
T  21678772 cttctctcaaaactttattcccgaggcacaagacaatggcactcttggccttgtccacca 21678713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 7093939 - 7094095
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| ||  |||||||||||||||||||||||||||||| | || ||||||| ||||||||||| |||||||| |||||||| |||||    
T  7093939 agttgttgctttaggaattgtcgatgagccaaagactttgtcatatacaaagactccaactttgcccacatcgatgtcgcggttgcttcctttgctactt 7094038  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    ||||||||||||||||||| |||||  |||||||| ||||||||  |||||||||||    
T  7094039 ctctcaaaactttatccccaaggcataagacaatgacactcctgaccttgtccacca 7094095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 13289977 - 13290133
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||  | || ||||||||||||||| ||| | |||||| |||||||| ||| |    
T  13289977 agttgttgctttaggaattaccgatgagccaaagactttgtcatatacaatgactccaactttgaccacatcaatgtcccggttggttcctttgctacat 13290076  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||| ||||||| |||||||| |||| |||| |||||||||||    
T  13290077 ctctcaaaactttatccctgaggcacaagacaatgacacttctggccttgtccacca 13290133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 24749397 - 24749241
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||| ||||||||||| || ||||| ||||||||||||||||||||||||| |||  ||||||| |||||||||||||  ||||| ||| |||| |||||    
T  24749397 agttattgctttaggaattgccgatcagccaaagactttgtcatatacaaagatttcaactttgcccacatcgatgccatggttggttcttttgctactt 24749298  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||||||| |||||||||||||  ||| |||||||||||    
T  24749297 ctctcaaaactttatccccgaggcacaagacaatggcacttttggccttgtccacca 24749241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 5e-36
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 31159180 - 31159322
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||             ||| |||||||||||||||||||| |||||||| |||||    
T  31159180 agttgttgctttaggaattgccgatgagccaaagactttgtcatatac-------------ttgcccacatcgatgccgcggttgcttcctttgctactt 31159266  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    ||||||||||||||||||||| |||| |||||||||||||||||| |||||||||||    
T  31159267 ctctcaaaactttatccccga-gcacaagacaatggcactcctggccttgtccacca 31159322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 18391606 - 18391762
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| || || ||||||||| ||||| |||||||||||  |||| ||||| ||||| |||||||||||||||| |||||| |  || |    
T  18391606 agttgttgcttaaggaattgcctatgagccaacgacttggtcatatacaacgattccaacttagaccatatcgatgccgcggttggttccttcgcgacat 18391705  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | |||||||||||||||||||||||| |||||||||| ||||| | |||||||||||    
T  18391706 ccctcaaaactttatccccgaggcacaagacaatggcgctcctcgccttgtccacca 18391762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 7e-32
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 24816848 - 24816997
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| ||   |||||||||||||||||||||      || |||| |||||||||| |||||||| |||||||| |||||| |||||||    
T  24816848 agttgttgctttaggaattgtagatgagccaaagactttgtca------aaaattccaactttgaccgcatcgatgtcgcggttggttccttcgttactt 24816941  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    ||||| |||||||||||||||||||  |||||||| ||||||||| |||||||||||    
T  24816942 ctctc-aaactttatccccgaggcataagacaatgacactcctggccttgtccacca 24816997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 69; E-Value: 3e-31
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 6593968 - 6594124
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| || || ||||||||| ||||| |||||||||||  |||| ||||| ||||| |||||||||||||||| |||||| |  || |    
T  6593968 agttgttgcttaaggaattgcctatgagccaacgacttggtcatatacaacgattccaacttagaccatatcgatgccgcggttggttccttcgcgacat 6594067  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | ||||||||||| |||||||||||| |||||||||| ||||| | |||||||||||    
T  6594068 ccctcaaaactttgtccccgaggcacaagacaatggcgctccttgccttgtccacca 6594124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 69; E-Value: 3e-31
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 47675572 - 47675728
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| || || |||||||||||| || |||||||||||  | |||||||||||||||||||| |||||||| | ||||||||  || |    
T  47675572 agttgttgcttaaggaattgcctatgagccaaagatttggtcatatacaatgactcaaactttgaccacatcgacgccgcggtaggttcctttgcgacat 47675671  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | ||||||||||| || ||||||||| | |||||||||||||| | |||||||||||    
T  47675672 ccctcaaaactttgtcaccgaggcacaatacaatggcactcctagccttgtccacca 47675728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 7e-23
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 20298128 - 20298050
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatg 86  Q
    ||||||||||||||||||||||  |||||||||||||||||||||||||||||| ||||  |||||| |||||||||||    
T  20298128 taaagttgttgctttaggacttgtcgatgagccaaagactttgtcatatacaaagattccgactttgcccacatcgatg 20298050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 6570720 - 6570564
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| || || |||||||||||| || |||||||||||  | |  ||||||||||||||||| ||| |  | | |||||| |  || |    
T  6570720 agttgttgcttaaggaattgcctatgagccaaagatttggtcatatacaatgactgcaactttgaccacatcgacgccacaataggttccttcgcgacat 6570621  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | ||||||| |||||||||||||||| |||||||| ||||||| | |||||||||||    
T  6570620 ccctcaaaattttatccccgaggcacaagacaatgacactcctagccttgtccacca 6570564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 154
Target Start/End: Complemental strand, 26213530 - 26213387
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || |  |||||||||||| || ||| |||||||  | || || ||||||||||| ||| || || ||| |||||| | ||| |    
T  26213530 agttgttgctttaggaattgcaaatgagccaaagatttggtcctatacaatgactccaaatttgaccacattgattccacgattggttccttcgctacat 26213431  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctg 154  Q
    ||||||||| |||||||||| |||||  ||||||||||||||||    
T  26213430 ctctcaaaaatttatccccgtggcacatgacaatggcactcctg 26213387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 4e-18
Query Start/End: Original strand, 11 - 153
Target Start/End: Complemental strand, 48490138 - 48489996
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| || || |||||||||||| ||||| ||||||||  | || ||||||||||||||||| ||||| || | |||||| |  || |    
T  48490138 agttgttgcttaaggaattgcctatgagccaaagattttgtaatatacaatgactccaactttgaccacatcgacgccgcagtaggttccttcgcgacat 48490039  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcct 153  Q
    | ||||| ||||| || ||||||||| |||||||| |||||||    
T  48490038 ccctcaatactttgtcaccgaggcacaagacaatgacactcct 48489996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000004
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 6047294 - 6047138
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || |  |||||||||||| ||  ||||||||||  | || || ||||| | ||| ||||||||| ||| |||||| |  || |    
T  6047294 agttgttgctttaggaattgcgtatgagccaaagatttgttcatatacaacgactccaaatttgatcgcattgatgccgcgattggttccttcgcaacat 6047195  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||| ||||  ||||||| ||| ||| ||||||||||||| || | |||||||||||    
T  6047194 ctctaaaaaaattatccctgagacacaagacaatggcacttctagccttgtccacca 6047138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 16884358 - 16884440
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggt 93  Q
    ||||||||||| | || || || |||||||||||| || |||||||||||  | || ||||||| ||||||||||||||||||    
T  16884358 agttgttgcttcaagagttgcctatgagccaaagatttcgtcatatacaatgactccaactttgcccacatcgatgccgcggt 16884440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 24261979 - 24261897
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggt 93  Q
    ||||||||||| | || || || |||||||||||| || |||||||||||  | || ||||||| ||||||||||||||||||    
T  24261979 agttgttgcttcaagagttgcctatgagccaaagatttcgtcatatacaatgactccaactttgcccacatcgatgccgcggt 24261897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 128; Significance: 2e-66; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 128; E-Value: 2e-66
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 6996388 - 6996229
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||  ||||||||||    
T  6996388 taaagttgttgctttaggacttgccgatgagccaaagactttgtcatatacaaatattcgaactttgaccacatcgatgtcgcggttggatcctttgtta 6996289  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||    
T  6996288 cttctctcaaaactttatccccgaggtacaagacaatggcactcctggccttgtccacca 6996229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 51750838 - 51750682
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| |||||||| |||||    
T  51750838 agttgttgctttaggaattgccgatgagccaaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttgctactt 51750739  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  51750738 ctctcaaaactttatccccgaggcacaagacaatggcactcctggccttgtccacca 51750682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 31736951 - 31737110
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||| |     
T  31736951 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcggttcgttcctttgctg 31737050  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||| ||||||||| |||||||||| |||||||||||||| ||| |||||||||||    
T  31737051 cttctctcgaaactttatacccgaggcacaagacaatggcactcttggccttgtccacca 31737110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 15 - 167
Target Start/End: Complemental strand, 16226965 - 16226813
Alignment:
Q  15 gttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttacttctct 114  Q
    |||||||||||| || ||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| ||||||||||||||||||    
T  16226965 gttgctttaggaattgccgatgagccaaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttgttacttctct 16226866  T
Q  115 caaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
     ||||||||||||||||||||| |||||| ||||||||||| |||||||||||    
T  16226865 taaaactttatccccgaggcacaagacaacggcactcctggccttgtccacca 16226813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 112; E-Value: 6e-57
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 50078269 - 50078428
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    |||||||||||||||||||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| | ||    
T  50078269 taaagttgttgctttaggacttgccgatgagcccaagattttgtcatatacaaatattcaaactttgaccacattgatgccgcagttgtttccttcgcta 50078368  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||| ||||||||| |||||||||| |||||||||||||| ||| |||||||||||    
T  50078369 cttctctcgaaactttattcccgaggcacaagacaatggcactcttggccttgtccacca 50078428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 28203177 - 28203333
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| ||  ||||||| ||||||||||||| |||||||| |||| ||||||| |||||||||||||||||||| |||||||| |||||    
T  28203177 agttgttgctttaggaattgtcgatgagtcaaagactttgtcttatacaaagattccaactttgcccacatcgatgccgcggttggttcctttgctactt 28203276  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||||||| |||||||||||||||||| ||| |||||||    
T  28203277 ctctcaaaactttatccccgaggcacaagacaatggcactcctggacttatccacca 28203333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 103; E-Value: 1e-51
Query Start/End: Original strand, 11 - 145
Target Start/End: Complemental strand, 28841223 - 28841089
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| |||||||| |||||    
T  28841223 agttgttgctttaggaattgccgatgagccaaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttgctactt 28841124  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatg 145  Q
    |||||||||||||||||||||||||| ||||||||    
T  28841123 ctctcaaaactttatccccgaggcacaagacaatg 28841089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 20300932 - 20300776
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| ||  |||||||||||||||||||||||||||||| |||| ||||||| ||| ||||||||| |||||  |||||||| |||||    
T  20300932 agttgttgctttaggaattgacgatgagccaaagactttgtcatatacaaagattccaactttgcccatatcgatgccacggtttgttcctttgctactt 20300833  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||    
T  20300832 ctctcaaaactttatctccgaggcacaagacaatggcactcctggccttgtccacca 20300776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 51758335 - 51758179
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| ||  ||||||||||||||||||||| |||||||| |||| || |||| ||||||||||| |||||||| |||||||| |||||    
T  51758335 agttgttgctttaggaattgtcgatgagccaaagactttgtcgtatacaaagattccaattttgcccacatcgatgtcgcggttgcttcctttgctactt 51758236  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    ||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||    
T  51758235 ctctcaaaattttatccccgaggcacaagacaatggcactcctggccttgtccacca 51758179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 97; E-Value: 6e-48
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 27338611 - 27338767
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || || ||||| |||||||||||||||||||||| |||| ||||||| |||||||||||||||| ||  |||||||| |||||    
T  27338611 agttgttgctttaggaattgccaatgagtcaaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcgattcattcctttgctactt 27338710  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    ||||||||| ||||||||| |||||| |||||||||||||||||| |||||||||||    
T  27338711 ctctcaaaaatttatccccaaggcacaagacaatggcactcctggccttgtccacca 27338767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 97; E-Value: 6e-48
Query Start/End: Original strand, 15 - 167
Target Start/End: Complemental strand, 47178159 - 47178007
Alignment:
Q  15 gttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttacttctct 114  Q
    |||| ||||||| || |||||||||||| |||||||||||||||||| |||| ||||||| |||||||||||||||| ||| |||||||| |||||||||    
T  47178159 gttgttttaggaattgccgatgagccaatgactttgtcatatacaaagattccaactttgcccacatcgatgccgcgattgcttcctttgctacttctct 47178060  T
Q  115 caaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
     ||||||||||||||||||||| |||||| ||||||||||| |||||||||||    
T  47178059 taaaactttatccccgaggcacaagacaacggcactcctggccttgtccacca 47178007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 25250759 - 25250915
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || |||| ||||||||||||||| ||||||||||||||  |||||| ||||||||||| |||||||||||||||||| |||||    
T  25250759 agttgttgctttaggaattaccgaagagccaaagactttgccatatacaaatatttgaactttaaccacatcgataccgcggttgtttcctttgctactt 25250858  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    ||||||||||||||| |  ||||||| ||||||||||||| |||| |||| ||||||    
T  25250859 ctctcaaaactttattcttgaggcacaagacaatggcacttctggccttgcccacca 25250915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 92; E-Value: 5e-45
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 28997730 - 28997889
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    |||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||  |||||||||||||| |||| || |||||| ||||||| ||    
T  28997730 taaagttgttgctttaggacttgccgatgagtcaaagattttgtcatatacaaatatttgaactttgaccacattgatgtcgtggttgtatcctttgcta 28997829  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||| ||||||||| || ||||||| ||| |||||||||||||  |||||||||||    
T  28997830 cttctctcgaaactttattcctgaggcacaagataatggcactcctgaccttgtccacca 28997889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 92; E-Value: 5e-45
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 29003446 - 29003605
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    |||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||  |||||||||||||| |||| || |||||| ||||||| ||    
T  29003446 taaagttgttgctttaggacttgccgatgagtcaaagattttgtcatatacaaatatttgaactttgaccacattgatgtcgtggttgtatcctttgcta 29003545  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||| ||||||||| || ||||||| ||| |||||||||||||  |||||||||||    
T  29003546 cttctctcgaaactttattcctgaggcacaagataatggcactcctgaccttgtccacca 29003605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 78; E-Value: 1e-36
Query Start/End: Original strand, 8 - 161
Target Start/End: Complemental strand, 16429752 - 16429599
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    |||||||||| |||||||| |||| ||||||||||||||||||||||||||||| | |  |||||| |||||||||| |||||||| | |||||| | ||    
T  16429752 taaagttgttactttaggaatttctgatgagccaaagactttgtcatatacaaacacttgaactttaaccacatcgacgccgcggtagattccttcgcta 16429653  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgt 161  Q
     |||||||||||| || | |||||||||| |||||||||||||||||| |||||    
T  16429652 tttctctcaaaacattgttcccgaggcacaagacaatggcactcctggccttgt 16429599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 69; E-Value: 3e-31
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 8348543 - 8348699
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| ||  |||||  ||||||||||||||||||||||| | || ||||||||||||||||| ||| |||||| || ||| | |||||    
T  8348543 agttgttgctttaggaattgtcgatgtcccaaagactttgtcatatacaaagactctaactttgaccacatcgacgccacggttggtttcttcgctactt 8348642  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    || ||||||||||||||| ||||||  |||||||| ||||| ||| |||||| ||||    
T  8348643 ctttcaaaactttatccctgaggcataagacaatgacactcatggccttgtctacca 8348699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 31657940 - 31657781
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    |||||||||||||| |||| ||||| || ||||||||| || |||||||||||  | || ||||||||||||||||| |||||||||| ||||||    |    
T  31657940 taaagttgttgcttaaggaatttcctataagccaaagatttggtcatatacaatgactccaactttgaccacatcgacgccgcggttggttccttcacga 31657841  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | || ||||||||||| || ||||||||| |||||||||||||||| | |||||||||||    
T  31657840 catccctcaaaactttgtcaccgaggcacaagacaatggcactcctagccttgtccacca 31657781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 65; E-Value: 7e-29
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 3805616 - 3805772
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || || |||||||||||| || |||||| ||||  | || ||| ||||||||||||||| |||||||| |||||| | ||  |    
T  3805616 agttgttgctttaggaattgccaatgagccaaagatttggtcataaacaacaactctaacgttgaccacatcgatgtcgcggttggttccttcgctatat 3805715  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||| ||| |||||||| |||| ||||  ||||||||||    
T  3805716 ctctcaaaactttatccccgagacacaagacaatgacacttctggcattgtccacca 3805772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 57 - 167
Target Start/End: Original strand, 31424546 - 31424656
Alignment:
Q  57 acaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttacttctctcaaaactttatccccgaggcacgagacaatggcactcctggt 156  Q
    ||||| |||| ||||||| ||||||| ||| || ||||| |||||||| ||||||||||||||||| ||||||||||||| |||||||||||||||||      
T  31424546 acaaagattccaactttgcccacatctatgtcgtggttggttcctttgctacttctctcaaaacttcatccccgaggcacaagacaatggcactcctgac 31424645  T
Q  157 cttgtccacca 167  Q
    |||||||||||    
T  31424646 cttgtccacca 31424656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 13127213 - 13127369
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||| ||||| || ||  |||||||||||||| ||||||||||||||| | || ||||||||  ||||||||| |||||||  || ||| | ||| |    
T  13127213 agttgtttctttaagaattgtcgatgagccaaagaatttgtcatatacaaagactccaactttgaagacatcgatgtcgcggttagttacttcgctacat 13127312  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    ||||||||| |||||||| ||||||| ||| ||||||||||||||  ||||||||||    
T  13127313 ctctcaaaattttatcccagaggcacaagaaaatggcactcctggctttgtccacca 13127369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 3157396 - 3157240
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| ||  | ||||||||||||||| |||||||| ||  | || ||||||||||||||||| |||||||| | |||||| |  || |    
T  3157396 agttgttgcttaaggaattgtctatgagccaaagacttggtcatatagaatgactccaactttgaccacatcgacgccgcggtaggttccttcgcgacat 3157297  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | |||||||||||  | ||||||||| |||||||||||||||| | |||||||||||    
T  3157296 ccctcaaaactttgccaccgaggcacaagacaatggcactcctagccttgtccacca 3157240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 145
Target Start/End: Original strand, 28222856 - 28222990
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| || || |||||||||||| || |||||||||||  |  | |||||||||||||||||||| ||||||| |||||| |  || |    
T  28222856 agttgttgcttaaggaattgcctatgagccaaagatttggtcatatacaatgacaccaactttgaccacatcgatgctgcggttggttccttcgcgacat 28222955  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatg 145  Q
    | ||||||||||| || ||||||||| ||||||||    
T  28222956 ccctcaaaactttgtcaccgaggcacaagacaatg 28222990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 50168785 - 50168940
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| || || |||||||||| |||| |||||||||||  | || ||||||||||| ||||| | || ||||| |||||| |  || |    
T  50168785 agttgttgcttaaggaattgcctatgagccaaaaacttggtcatatacaag-actccaactttgaccatatcgacgtcgtggttggttccttcgcgacat 50168883  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | ||||||||||| || | ||||||| |||||||||||||||| | |||||||||||    
T  50168884 ccctcaaaactttgtcactgaggcacaagacaatggcactcctagccttgtccacca 50168940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000004
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 16456451 - 16456294
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || || ||||||||||| ||| |||||||||||  | || |||||||| |||||| | ||||| |||| |||||| |  || |    
T  16456451 agttgttgctttaggatttgcctatgagccaaagtcttggtcatatacaatgactccaactttgatcacatcaacgccgcagttggttccttcgcgacat 16456352  T
Q  111 ctctcaaaactttatccccgaggcac-gagacaatggcactcctggtcttgtccacca 167  Q
    | ||||||| ||| || |||||||||  | |||||| ||||||| | |||||||||||    
T  16456351 ccctcaaaaatttgtcaccgaggcacaaacacaatgacactcctagccttgtccacca 16456294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 41397670 - 41397752
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggt 93  Q
    ||||||||||| | || || || |||||||||||| || |||||||||||  | || ||||| | ||||||||||||||||||    
T  41397670 agttgttgcttcaagagttgcctatgagccaaagatttcgtcatatacaatgactccaacttcgcccacatcgatgccgcggt 41397752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 68 - 151
Target Start/End: Original strand, 13784799 - 13784882
Alignment:
Q  68 aactttgaccacatcgatgccgcggttgtttcctttgttacttctctcaaaactttatccccgaggcacgagacaatggcactc 151  Q
    |||||||||||||||||||  ||||| | |||||| |  || || ||||||| |||||| | ||||||| |||||||| |||||    
T  13784799 aactttgaccacatcgatgttgcggtaggttccttcgcgacatccctcaaaattttatctctgaggcacaagacaatgccactc 13784882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 124; Significance: 4e-64; HSPs: 28)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 4e-64
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 22802212 - 22802371
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||||||||||||||     
T  22802212 taaagttgttgctttaggacttgccgatgagccaaagactttgtcatatacaaatattcgaactttgaccacattgatgtcgcggttgtttcctttgttg 22802311  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    ||||||||||| |||||| |||||||||| |||||||||||||||||| |||||||||||    
T  22802312 cttctctcaaatctttattcccgaggcacaagacaatggcactcctggccttgtccacca 22802371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 7e-60
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 22134095 - 22134251
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || ||||||||||||||||||||||||||| ||| |||| ||||||| |||||||||||||||||||| |||||||| |||||    
T  22134095 agttgttgctttaggaattgccgatgagccaaagactttgtcatataaaaagattccaactttgcccacatcgatgccgcggttgcttcctttgctactt 22134194  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  22134195 ctctcaaaactttatccccgaggcacaagacaatggcactcctggccttgtccacca 22134251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 15 - 167
Target Start/End: Original strand, 16933630 - 16933782
Alignment:
Q  15 gttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttacttctct 114  Q
    |||| ||||||| || ||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| |||||||| |||||||||    
T  16933630 gttgttttaggaattgccgatgagccaaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttgctacttctct 16933729  T
Q  115 caaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  16933730 caaaactttatccccgaggcacaagacaatggcactcctggccttgtccacca 16933782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 22782215 - 22782371
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| ||  |||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| |||||||| |||||    
T  22782215 agttgttgctttaggaattgtcgatgagccaaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttgctactt 22782314  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||    
T  22782315 ctctcaaaactttatccccgaggcacaagacaacggcactcctggccttgtccacca 22782371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 112; E-Value: 6e-57
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 14788908 - 14789067
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| || || |||| ||    
T  14788908 taaagttgttgctttaggacttgccgatgagccaaagactttgtcatatacaaatattcgatctttgaccacatcgatgccgcggtagtatcttttgcta 14789007  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    ||||||||||||||||||||||||||  | |||||||||||||| ||| |||||||||||    
T  14789008 cttctctcaaaactttatccccgaggagcaagacaatggcactcatggccttgtccacca 14789067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 112; E-Value: 6e-57
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 36920973 - 36921132
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    |||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||| |     
T  36920973 taaagttgttgctttaagacttgccaatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcgattggatcctttgctg 36921072  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||||||| || ||||| |||||||||||| |||||||||||    
T  36921073 cttctctcaaaactttatccccgaggtacaagacagtggcactcctggccttgtccacca 36921132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 36379142 - 36378983
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||| |||||| | ||    
T  36379142 taaagttgttgctttaggacttgccgatgagccaaagactttgtcatatacaaatattcgaactttgactacatcgatgccacggttggttccttcgcta 36379043  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    ||||||||||| |||||| |||||||||| |||||||| ||||||||  |||||||||||    
T  36379042 cttctctcaaatctttattcccgaggcacaagacaatgacactcctgaccttgtccacca 36378983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 102; E-Value: 6e-51
Query Start/End: Original strand, 8 - 165
Target Start/End: Original strand, 18536979 - 18537136
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||| |||||| | ||    
T  18536979 taaagttgttgctttaggaattgccgatgagccaaagactttgtcatatacaaatatacgaactttgaccacatcgatgccgcgattggttccttcgcta 18537078  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccac 165  Q
    | ||||| |||||||||| |||||||||| |||||||||||||| ||| |||||||||    
T  18537079 catctcttaaaactttattcccgaggcacaagacaatggcactcttggccttgtccac 18537136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 15 - 167
Target Start/End: Original strand, 11008050 - 11008202
Alignment:
Q  15 gttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttacttctct 114  Q
    |||||||||||| || ||||||||||||||||||||||||||||||| |||| | ||||  |||||||||||||||||||| |||||||| |||||||||    
T  11008050 gttgctttaggaattgccgatgagccaaagactttgtcatatacaaagattccatcttttcccacatcgatgccgcggttgcttcctttgctacttctct 11008149  T
Q  115 caaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||| ||||||||| |||||| ||||||||||| |||||||||||    
T  11008150 caaaactttatctccgaggcacaagacaacggcactcctggccttgtccacca 11008202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 97; E-Value: 6e-48
Query Start/End: Original strand, 15 - 167
Target Start/End: Original strand, 22046197 - 22046349
Alignment:
Q  15 gttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttacttctct 114  Q
    |||||||||||| || ||||||||||||||||||||||||||||||| |||| || |||| |||||||||||||| ||||| || ||||| |||||||||    
T  22046197 gttgctttaggaattgccgatgagccaaagactttgtcatatacaaagattccaaatttgcccacatcgatgccgaggttgcttactttgctacttctct 22046296  T
Q  115 caaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    ||||||||||||| |||||||| |||||||||||| ||||| |||||||||||    
T  22046297 caaaactttatcctcgaggcacaagacaatggcacacctggccttgtccacca 22046349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 97; E-Value: 6e-48
Query Start/End: Original strand, 8 - 164
Target Start/End: Complemental strand, 47563613 - 47563457
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    ||||||||||||||||||| ||  ||||||||||| |||||||||||||||||| |||| ||||||  ||||||||||| ||||||||| ||||||| ||    
T  47563613 taaagttgttgctttaggaattgtcgatgagccaacgactttgtcatatacaaagattccaacttttcccacatcgatgtcgcggttgtatcctttgcta 47563514  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtcca 164  Q
    ||||||||||||||||||||||||||||| |||||||| ||||| ||| ||||||||    
T  47563513 cttctctcaaaactttatccccgaggcacaagacaatgtcactcttggccttgtcca 47563457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 92; E-Value: 5e-45
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 16454161 - 16454002
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    ||||||||||||||||||||||  ||||||||||||| ||||||| |||||||||||||||| |||||||||||||||| ||||||||| | ||||| ||    
T  16454161 taaagttgttgctttaggacttgtcgatgagccaaagtctttgtcgtatacaaatattcaaaatttgaccacatcgatgtcgcggttgtatactttgcta 16454062  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||| ||||||||| |  ||||||| ||||| ||||| |||||| |||||||||||    
T  16454061 cttctctcgaaactttattcatgaggcacaagacattggcaatcctggccttgtccacca 16454002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 12395338 - 12395493
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || ||||||||||||||||||| ||| ||||||| |||| ||||||| ||||||||||| | ||||||  ||||||| |||||    
T  12395338 agttgttgctttaggaattgccgatgagccaaagactttttca-atacaaagattccaactttgcccacatcgatgtcacggttggctcctttgctactt 12395436  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    ||||||||| |||||||||||||||| ||||||||||||| |||| |||||||||||    
T  12395437 ctctcaaaattttatccccgaggcacaagacaatggcacttctggccttgtccacca 12395493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 12400300 - 12400455
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || ||||||||||||||||||| ||| ||||||| |||| ||||||| ||||||||||| | ||||||  ||||||| |||||    
T  12400300 agttgttgctttaggaattgccgatgagccaaagactttttca-atacaaagattccaactttgcccacatcgatgtcacggttggctcctttgctactt 12400398  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    ||||||||| |||||||||||||||| ||||||||||||| |||| |||||||||||    
T  12400399 ctctcaaaattttatccccgaggcacaagacaatggcacttctggccttgtccacca 12400455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 82; E-Value: 5e-39
Query Start/End: Original strand, 15 - 167
Target Start/End: Original strand, 9175954 - 9176109
Alignment:
Q  15 gttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttacttctct 114  Q
    |||||||||||| || ||||| ||||||||||||||||||||||||| ||||  |||||  ||||||||||| || ||||| |||||||| |||||||||    
T  9175954 gttgctttaggaattgccgatcagccaaagactttgtcatatacaaagattcccacttttcccacatcgatgtcgtggttgcttcctttgctacttctct 9176053  T
Q  115 caaaactttatccccgaggcacgagacaatggcactcctgg---tcttgtccacca 167  Q
    |||||||||||| ||||||||| |||||| |||||||||||   ||||||||||||    
T  9176054 caaaactttatctccgaggcacaagacaacggcactcctggccttcttgtccacca 9176109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 5136825 - 5136669
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| || || ||||||||| ||||| |||||||||||  |||| ||||| ||||| |||||||||||||||| |||||| |  || |    
T  5136825 agttgttgcttaaggaattgcctatgagccaacgacttggtcatatacaacgattccaacttagaccatatcgatgccgcggttggttccttcgcgacat 5136726  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | ||||||||||| |||||||||||| |||||||||||||||| | |||||||||||    
T  5136725 ccctcaaaactttgtccccgaggcacaagacaatggcactcctcgccttgtccacca 5136669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 11 - 150
Target Start/End: Original strand, 3578172 - 3578311
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||  | ||  |||||| ||||||||||||||||||| ||| | || ||||||||||||||||||| |||||||| ||||||   ||| |    
T  3578172 agttgttgctttaaaagttggcgatgatccaaagactttgtcatatataaagactccaactttgaccacatcgatgtcgcggttggttccttcactacat 3578271  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcact 150  Q
    |||||||||||||||| | ||||||| |||||||||||||    
T  3578272 ctctcaaaactttatctctgaggcacaagacaatggcact 3578311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 11 - 104
Target Start/End: Original strand, 12402574 - 12402667
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttg 104  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||| | |||||| ||||||||    
T  12402574 agttgttgctttaggaattgccgatgagccaaagactttgtcatatacaaagattccaactttgcccacatcgatgtcacggttggttcctttg 12402667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 7123441 - 7123285
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| ||  | ||||||||| ||||| |||||||||||  |||| ||||| ||||| |||||||||||| ||| |||||| |  || |    
T  7123441 agttgttgcttaaggaattgtctatgagccaacgacttggtcatatacaacgattccaacttagaccatatcgatgccgcgtttggttccttcgcgacat 7123342  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | ||||||||||| |||||||||||| |||||||||| ||||| | |||||||||||    
T  7123341 ccctcaaaactttgtccccgaggcacaagacaatggcgctcctcgccttgtccacca 7123285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 8394151 - 8393996
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| ||  | ||||||||| ||||| |||||||||||  |||| ||||| ||||| |||||||||||||||| |||||| |  || |    
T  8394151 agttgttgcttgaggaattgtctatgagccaacgacttggtcatatacaacgattccaacttagaccatatcgatgccgcggttggttccttcgcgacat 8394052  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | ||||||| |||||||||||||||| |||||||||| ||||| | |||||||||||    
T  8394051 ccctcaaaa-tttatccccgaggcacaagacaatggcgctcctcgccttgtccacca 8393996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 52094797 - 52094953
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| || || ||||||||||||||| |||||||||||  | || |||||||||||||||||||||||||| | |||||| || |  |    
T  52094797 agttgttgcttaaggaattgcctatgagccaaagacttggtcatatacaatgactccaactttgaccacatcgatgccgcggtaggttccttcgtgaaat 52094896  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | ||||||||||| || |||| |||| |||||||| ||||| | | |||||||||||    
T  52094897 ccctcaaaactttgtcaccgaagcacaagacaatgacactcatagccttgtccacca 52094953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 13 - 167
Target Start/End: Complemental strand, 5872546 - 5872392
Alignment:
Q  13 ttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttacttct 112  Q
    ||||||||| |||| || || ||||||||||||||| ||||||| |||  | || ||||||||||||||||| | |||||||| |||||| |  || ||     
T  5872546 ttgttgcttaaggaattgcctatgagccaaagacttggtcatatgcaacgactccaactttgaccacatcgacggcgcggttggttccttcgcgacctcc 5872447  T
Q  113 ctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    ||||||||||| || ||||||||| |||||||||||||| | | |||||||||||    
T  5872446 ctcaaaactttgtcaccgaggcacaagacaatggcactcatagccttgtccacca 5872392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 12743363 - 12743519
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||| ||| |||| || || || |||||||||||| |||||||||||  |||  ||||||||||||||||| |||||||| | ||||||    || |    
T  12743363 agttgtttcttaaggaattgcctataagccaaagacttggtcatatacaatgatttcaactttgaccacatcgacgccgcggtaggttccttcacgacat 12743462  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | ||||||||||| || |||||||||  |||||||||||| || | |||||||||||    
T  12743463 ccctcaaaactttgtcaccgaggcacacgacaatggcacttctagccttgtccacca 12743519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 11 - 154
Target Start/End: Complemental strand, 10113713 - 10113570
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||| ||||||| || ||  |||||||||||||| |||||||||||  | || ||||||||||||||||||   ||||  | |||||| || || |    
T  10113713 agttgttgatttaggaattgcctgtgagccaaagacttagtcatatacaatgactccaactttgaccacatcgatattgcggaaggttccttcgtgacat 10113614  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctg 154  Q
    |||| |||||||||| || ||||||| |||||| ||||||||||    
T  10113613 ctctgaaaactttattcctgaggcacaagacaacggcactcctg 10113570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 150
Target Start/End: Complemental strand, 26558403 - 26558303
Alignment:
Q  50 gtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttacttctctcaaaactttatccccgaggcacgagacaatggcac 149  Q
    |||||||||||  | || ||||||||||| ||| |||||||||||| ||||||||  || || || |||||||||||| |||||||| |||||||| |||    
T  26558403 gtcatatacaacgactccaactttgaccatatccatgccgcggttggttcctttgcgacatcccttaaaactttatcctcgaggcacaagacaatgtcac 26558304  T
Q  150 t 150  Q
    |    
T  26558303 t 26558303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 13 - 151
Target Start/End: Original strand, 5207100 - 5207238
Alignment:
Q  13 ttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttacttct 112  Q
    |||||| ||||||| ||  | |||||||||||||||||||||||||||| | || ||||||| |||   |||||  |||||   ||||||    || ||     
T  5207100 ttgttgatttaggatttgtctatgagccaaagactttgtcatatacaaagactccaactttgcccatgccgatgttgcggtacgttccttcacaacatcc 5207199  T
Q  113 ctcaaaactttatccccgaggcacgagacaatggcactc 151  Q
    ||||| |||||||||||||||||| | ||||| ||||||    
T  5207200 ctcaacactttatccccgaggcacaatacaatagcactc 5207238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 144
Target Start/End: Complemental strand, 5350535 - 5350501
Alignment:
Q  110 tctctcaaaactttatccccgaggcacgagacaat 144  Q
    ||||||||||||||||||||||||||| |||||||    
T  5350535 tctctcaaaactttatccccgaggcacaagacaat 5350501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 9225060 - 9224978
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggt 93  Q
    ||||||||||| | || || || |||||||||||| || |||||||||||  | || ||||| | ||||||||||||||||||    
T  9225060 agttgttgcttcaagagttgcctatgagccaaagatttcgtcatatacaatgactccaacttcgcccacatcgatgccgcggt 9224978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 121; Significance: 3e-62; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 7 - 167
Target Start/End: Complemental strand, 3315466 - 3315306
Alignment:
Q  7 ataaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtt 106  Q
    |||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||  |||||||||| |||||||| |||||||| |    
T  3315466 ataaagttgttgctttaggaattgccgatgagccaaagactttgtcatatacaaatattccaactttgcacacatcgatgtcgcggttggttcctttgct 3315367  T
Q  107 acttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  3315366 acttctctcaaaactttatccccgaggcacaagacaatggcactcctggccttgtccacca 3315306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 53917149 - 53917308
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||     
T  53917149 taaagttgttgctttaggacttgccgatgagccaaagactttgtcatatacaaatattcgaactttgaccacatcgatgccgcagttgtttcctttgttg 53917248  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||| ||| ||||| |||||||||| |||||||| ||||||||| |||||||||||    
T  53917249 cttctctcgaaaatttatacccgaggcacaagacaatgacactcctggccttgtccacca 53917308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 109; E-Value: 4e-55
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 456687 - 456531
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||| |||||||| |||||    
T  456687 agttgttgctttaggaattgccgatgagccaaagactttgtcatatacaaagattccaactttgcccacatcgatgtcgcggttgcttcctttgctactt 456588  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||| ||||||||| |||||| ||||||||||| |||||||||||    
T  456587 ctctcaaaactttatctccgaggcacaagacaacggcactcctggccttgtccacca 456531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 109; E-Value: 4e-55
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 6065271 - 6065427
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || |||||||||||||||||||||| |||||||| |||| ||||||| |||||||||||||||||||| |||||||| |||||    
T  6065271 agttgttgctttaggaattgccgatgagccaaagactttgtcgtatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttgctactt 6065370  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    ||||||||||||||||| |||||||| |||||| ||||||||||| |||||||||||    
T  6065371 ctctcaaaactttatcctcgaggcacaagacaacggcactcctgggcttgtccacca 6065427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 109; E-Value: 4e-55
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 43226857 - 43226701
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||  |||||||| |||||    
T  43226857 agttgttgctttaggaattgccgatgagccaaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttcgttcctttgctactt 43226758  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||| ||||||||| |||||||||||||||| | |||||||||||    
T  43226757 ctctcaaaactttatctccgaggcacaagacaatggcactcctcgccttgtccacca 43226701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 104; E-Value: 4e-52
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 42991082 - 42990923
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||| ||||||| ||||||||||| |||||||  |||||||| ||    
T  42991082 taaagttgttgctttaggacttgccgatgagccaaagactttgtcatatataaagattccaactttgcccacatcgatgtcgcggttcgttcctttgcta 42990983  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    ||| ||||||||||||||| ||||||||| |||||||| ||||||||| |||||||||||    
T  42990982 cttttctcaaaactttatctccgaggcacaagacaatgacactcctggccttgtccacca 42990923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 15 - 167
Target Start/End: Complemental strand, 5192426 - 5192274
Alignment:
Q  15 gttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttacttctct 114  Q
    |||||||||||| || | ||||||||||||||||||||||||||||| |||| ||||||| ||||||||||| ||| |||| |||||||| |||||||||    
T  5192426 gttgctttaggaattgctgatgagccaaagactttgtcatatacaaagattccaactttgcccacatcgatgtcgcagttgcttcctttgctacttctct 5192327  T
Q  115 caaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||| |||||||||||||| ||| |||||||||||    
T  5192326 caaaactttatccccgaggcacaagacaatggcactcttggccttgtccacca 5192274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 5898189 - 5898033
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||||| || || ||||||||||||||||||||||||||||||| |||| ||||||| ||| ||||||| |||||||  |||||||| |||||    
T  5898189 agttgttgctttaagaattgccgatgagccaaagactttgtcatatacaaagattccaactttgcccatatcgatgtcgcggttcgttcctttgctactt 5898090  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    || ||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  5898089 ctatcaaaactttatccccgaggcacaagacaatggcactcctggccttgtccacca 5898033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 10957801 - 10957957
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||| |||| ||||||| ||| ||||||||| |||||| |||||||| |||||    
T  10957801 agttgttgctttaggaattgccgatgagccaaagactttgtcatatacaaagattccaactttgcccaaatcgatgccacggttggttcctttgctactt 10957900  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    ||||||||||||||||| |||||||| ||||||||| |||||||| |||||| ||||    
T  10957901 ctctcaaaactttatcctcgaggcacaagacaatggaactcctggccttgtctacca 10957957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 15 - 167
Target Start/End: Complemental strand, 11168877 - 11168725
Alignment:
Q  15 gttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttacttctct 114  Q
    |||||||||||| || ||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||| ||||||| ||||| || ||||| |||    
T  11168877 gttgctttaggaattgccgatgagccaaagactttgtcatatacaaagattccaactttgcccacatcgatgctgcggttgcttcctctgctacttatct 11168778  T
Q  115 caaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||| |||||||||||||||| | |||||||||||    
T  11168777 caaaactttatccccgaggcacaagacaatggcactcctagccttgtccacca 11168725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 97; E-Value: 6e-48
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 18098649 - 18098804
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || || |||||||||||||||||||||||||||| |||| | ||||| |||||| ||||||||||||| |||||||| |||||    
T  18098649 agttgttgctttaggaattgcctatgagccaaagactttgtcatatacaaagattccatctttgcccacattgatgccgcggttggttcctttgctactt 18098748  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    ||||||||||||||| |||||||| | |||||||||||||||||| |||||||||||    
T  18098749 ctctcaaaactttat-cccgaggcgcaagacaatggcactcctggccttgtccacca 18098804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 93; E-Value: 1e-45
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 23634225 - 23634070
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||| | || ||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||  ||| ||| |||||| | |||||    
T  23634225 agttgttgctttagaaattgccgatgagccaaagactttgtcatatacaaagattccaactttgacctcatcgatgatgcg-ttggttccttcgctactt 23634127  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||    
T  23634126 ctctcaaaactttatccctgaggcacaagacaatggcactcctggtattgtccacca 23634070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 2e-44
Query Start/End: Original strand, 11 - 165
Target Start/End: Original strand, 28101486 - 28101640
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||| |||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||| ||| |||| |||||    
T  28101486 agttgttactttaggaattaccgatgagccaaagactttgtcatatacaaatattcgaactttgaccacattgatgtcgcggttggttcttttgctactt 28101585  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccac 165  Q
    || || ||||||||| |||||||||| ||| ||||| |||||||| |||||||||    
T  28101586 ctatcgaaactttattcccgaggcacaagagaatggaactcctggccttgtccac 28101640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 89; E-Value: 3e-43
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 1619952 - 1620108
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || || ||||||||||||||||||||||| |||| | || ||||||||||||||||||||||| |||  | |||| | ||| |    
T  1619952 agttgttgctttaggaattaccaatgagccaaagactttgtcatatgcaaagactccaactttgaccacatcgatgccgcagtttgtaccttcgctacat 1620051  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    || ||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  1620052 ctatcaaaactttatccccgaggcacaagacaatggcactcctggccttgtccacca 1620108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 43422943 - 43423102
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    ||||||||||| ||| |||||| ||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||||  |||||| ||    
T  43422943 taaagttgttgatttgggacttgccgatgagccaaagactttgtcatatacaaagattccaactttgcccacatcgatgtcgcggttgtaacctttgcta 43423042  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||| ||| |||||  |||||||| |||| |||| |||| ||||||    
T  43423043 cttctctcaaaactttattcccaaggcataagacaatgacacttctggccttgcccacca 43423102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 77; E-Value: 5e-36
Query Start/End: Original strand, 11 - 131
Target Start/End: Original strand, 4309988 - 4310108
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||| |||  ||||||| ||| || ||||||||||||  |||||||| |||||    
T  4309988 agttgttgctttaggaattgccgatgagccaaagactttgtcatatacaaagatttcaactttgcccatattgatgccgcggttcgttcctttgctactt 4310087  T
Q  111 ctctcaaaactttatccccga 131  Q
    |||||||||||||||||||||    
T  4310088 ctctcaaaactttatccccga 4310108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 77; E-Value: 5e-36
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 23199573 - 23199729
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| || || ||||||||||||||| |||||||||||  |||| ||||||||||| ||||||| |||||||| |||||| |  || |    
T  23199573 agttgttgcttaaggaattgcctatgagccaaagacttggtcatatacaacgattccaactttgaccatatcgatgtcgcggttggttccttcgcaacat 23199672  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | ||||||||||| |||||||||||| |||||||||||||||| | |||||||||||    
T  23199673 ccctcaaaactttgtccccgaggcacaagacaatggcactcctagccttgtccacca 23199729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 77; E-Value: 5e-36
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 37407422 - 37407266
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| || || ||||||||||||||| |||||||||||  | || |||||||||||||| ||||||||||||| |||||| |  || |    
T  37407422 agttgttgcttaaggaattgcctatgagccaaagacttggtcatatacaacgactccaactttgaccacattgatgccgcggttggttccttcgcgacat 37407323  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | ||||||||||| |||||||||||| |||||||||||||||| | |||||||||||    
T  37407322 ccctcaaaactttgtccccgaggcacaagacaatggcactcctagccttgtccacca 37407266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 76; E-Value: 2e-35
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 27421421 - 27421262
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    ||||||||||| ||||||| || ||||||||||||||| |||||||   ||||  | || ||||||||||||||| ||| |||||||| |||||| ||||    
T  27421421 taaagttgttgttttaggaattgccgatgagccaaagattttgtcaataacaacgactccaactttgaccacatcaatgtcgcggttggttccttcgtta 27421322  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | |||||||||||||||||||| |||||| |||||||| ||||||||| ||| |||||||    
T  27421321 catctctcaaaactttatccccaaggcacaagacaatgacactcctggccttttccacca 27421262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 10209934 - 10209778
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| || || ||||||||| ||||| |||||||||||  |||| ||||| ||||| |||||||||||||||| |||||| |  || |    
T  10209934 agttgttgcttaaggaattgcctatgagccaacgacttggtcatatacaatgattccaacttagaccatatcgatgccgcggttggttccttcgcgacat 10209835  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | |||||||||||||||||||||||| |||||||||| ||||| | |||||||||||    
T  10209834 ccctcaaaactttatccccgaggcacaagacaatggcgctcctcgccttgtccacca 10209778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 70; E-Value: 7e-32
Query Start/End: Original strand, 34 - 167
Target Start/End: Complemental strand, 6717223 - 6717090
Alignment:
Q  34 atgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttacttctctcaaaactttatccccgagg 133  Q
    ||||||||| ||||| |||||||||||  |||| ||||| ||||| |||||||||||||||| |||||| |  || || |||||||||||||||||||||    
T  6717223 atgagccaacgacttggtcatatacaacgattccaacttagaccatatcgatgccgcggttggttccttcgcgacatccctcaaaactttatccccgagg 6717124  T
Q  134 cacgagacaatggcactcctggtcttgtccacca 167  Q
    ||| |||||||||||||||| | |||||||||||    
T  6717123 cacaagacaatggcactcctcgccttgtccacca 6717090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 69; E-Value: 3e-31
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 4600154 - 4600310
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| || || ||||||||| ||||| |||||||||||  |||| ||||| ||||| |||||||||||||||| |||||| |  || |    
T  4600154 agttgttgcttaaggaattgcctatgagccaacgacttggtcatatacaacgattccaacttagaccatatcgatgccgcggttggttccttcgcgacat 4600253  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | ||||||||||| |||||||||||| |||||||||| ||||| | |||||||||||    
T  4600254 ccctcaaaactttgtccccgaggcacaagacaatggcgctcctcgccttgtccacca 4600310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 69; E-Value: 3e-31
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 53598006 - 53597850
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||| ||||||||| | || ||||||||  ||||||||||||||||||||| | |  || ||||||||||||||||||||||||| ||||||   ||| |    
T  53598006 agttcttgctttagaaattgccgatgaggtaaagactttgtcatatacaaagacttcaattttgaccacatcgatgccgcggttgattccttatctacat 53597907  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    ||||||||||||||||  ||| |||| |||||||||||||||||  |||||||||||    
T  53597906 ctctcaaaactttatcatcgaagcacaagacaatggcactcctgaccttgtccacca 53597850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 67; E-Value: 5e-30
Query Start/End: Original strand, 11 - 153
Target Start/End: Original strand, 22834443 - 22834585
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| || || |||||||||||||||  ||||||||||  | || ||||||||||||||||| |||||||||| |||||| |  || |    
T  22834443 agttgttgcttaaggaattgcctatgagccaaagacttgatcatatacaatgactccaactttgaccacatcgacgccgcggttggttccttcgcgacat 22834542  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcct 153  Q
    | |||||||||||||| ||||||||| ||||||||||||||||    
T  22834543 ccctcaaaactttatcaccgaggcacaagacaatggcactcct 22834585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 65; E-Value: 7e-29
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 5259757 - 5259913
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| || || ||||||||||||||| |||||||||||  | || |||||||||||||| ||||||||||||| |||||| |  || |    
T  5259757 agttgttgcttaaggaattgcctatgagccaaagacttggtcatatacaacgactccaactttgaccacatagatgccgcggttggttccttcgcgacat 5259856  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | || |||||||| ||| |||||||| |||||||||||||||| | | |||||||||    
T  5259857 cccttaaaactttttcctcgaggcacaagacaatggcactcctagccatgtccacca 5259913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 65; E-Value: 7e-29
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 10059200 - 10059044
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| || || ||||||||| ||||| |||||||||||  |||| ||||| ||||| ||||||||||| |||| |||||| |  || |    
T  10059200 agttgttgcttaaggaattgcctatgagccaacgacttggtcatatacaacgattccaacttagaccatatcgatgccgcagttggttccttcgcgacat 10059101  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | ||||||||||| ||||||||||||  ||||||||||||||| | |||||||||||    
T  10059100 ccctcaaaactttgtccccgaggcacaggacaatggcactcctcgccttgtccacca 10059044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 13 - 167
Target Start/End: Original strand, 9635560 - 9635714
Alignment:
Q  13 ttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttacttct 112  Q
    ||||||||| |||| || || ||||||||||||||| |||||||||||    || |||||||||||| | ||||||||||||| |||||| |  || ||     
T  9635560 ttgttgcttaaggaattgcctatgagccaaagacttggtcatatacaacggctccaactttgaccacgtagatgccgcggttggttccttcgcgacatcc 9635659  T
Q  113 ctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    ||||||||||| |||||||||||  |||||||||||||||| | |||||||||||    
T  9635660 ctcaaaactttgtccccgaggcataagacaatggcactcctagccttgtccacca 9635714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 62; E-Value: 4e-27
Query Start/End: Original strand, 11 - 153
Target Start/End: Complemental strand, 25634657 - 25634514
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgt--ttcctttgttac 108  Q
    |||||| ||||||||| || | |||||| |||||||||||||||||| ||| | || |||||||||||| |||||||| || || |  |||||| | |||    
T  25634657 agttgtggctttaggaattgctgatgagtcaaagactttgtcatatataaagactctaactttgaccac-tcgatgccacgattttagttccttcgctac 25634559  T
Q  109 ttctctcaaaactttatccccgaggcacgagacaatggcactcct 153  Q
    |||||||||||||||||||||||||||| |||||||| |||||||    
T  25634558 ttctctcaaaactttatccccgaggcacaagacaatgacactcct 25634514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 10056978 - 10056822
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| || || ||||||||| ||||| |||||||||||  |||| ||||| ||||| ||||||||||| |||| |||||| |  || |    
T  10056978 agttgttgcttaaggaattgcctatgagccaacgacttggtcatatacaacgattccaacttagaccatatcgatgccgcagttggttccttcgcgacat 10056879  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | ||||||||||| ||||||||||||  ||||||||| ||||| | |||||||||||    
T  10056878 ccctcaaaactttgtccccgaggcacaggacaatggcgctcctcgccttgtccacca 10056822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 10061422 - 10061266
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| || || ||||||||| ||||| |||||||||||  |||| ||||| ||||| ||||||||||| |||| |||||| |  || |    
T  10061422 agttgttgcttaaggaattgcctatgagccaacgacttggtcatatacaacgattccaacttagaccatatcgatgccgcagttggttccttcgcgacat 10061323  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | ||||||||||| ||||||||||||  ||||||||| ||||| | |||||||||||    
T  10061322 ccctcaaaactttgtccccgaggcacaggacaatggcgctcctcgccttgtccacca 10061266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 10063644 - 10063488
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| || || ||||||||| ||||| |||||||||||  |||| ||||| ||||| ||||||||||| |||| |||||| |  || |    
T  10063644 agttgttgcttaaggaattgcctatgagccaacgacttggtcatatacaacgattccaacttagaccatatcgatgccgcagttggttccttcgcgacat 10063545  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | ||||||||||| ||||||||||||  ||||||||| ||||| | |||||||||||    
T  10063544 ccctcaaaactttgtccccgaggcacaggacaatggcgctcctcgccttgtccacca 10063488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 10065866 - 10065710
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| || || ||||||||| ||||| |||||||||||  |||| ||||| ||||| ||||||||||| |||| |||||| |  || |    
T  10065866 agttgttgcttaaggaattgcctatgagccaacgacttggtcatatacaacgattccaacttagaccatatcgatgccgcagttggttccttcgcgacat 10065767  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | ||||||||||| ||||||||||||  ||||||||| ||||| | |||||||||||    
T  10065766 ccctcaaaactttgtccccgaggcacaggacaatggcgctcctcgccttgtccacca 10065710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 55; E-Value: 7e-23
Query Start/End: Original strand, 11 - 129
Target Start/End: Complemental strand, 7769335 - 7769218
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||| |||||||| || ||||||||||||||||||||||||||||||| | || ||||||||||||||||||| |||  ||| |||||||  ||| |    
T  7769335 agttgtttctttaggaattgccgatgagccaaagactttgtcatatacaaagactccaactttgaccacatcgatgtcgcaattggttccttttctacat 7769236  T
Q  111 ctctcaaaactttatcccc 129  Q
    ||||  |||||||||||||    
T  7769235 ctct-gaaactttatcccc 7769218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 23409766 - 23409922
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| || || |||||||||||| || |||||||||||  | ||||| |||||||| ||||| |||||||| | |||||| |  || |    
T  23409766 agttgttgcttaaggagttgcctatgagccaaagatttggtcatatacaatgactcaaaatttgaccatatcgacgccgcggtaggttccttcgcgacat 23409865  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | ||||||||||| ||||||||| || |||||||| ||||||| |  ||||||||||    
T  23409866 ccctcaaaactttgtccccgaggtacaagacaatgtcactcctagcattgtccacca 23409922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 50; E-Value: 6e-20
Query Start/End: Original strand, 34 - 167
Target Start/End: Complemental strand, 7762981 - 7762848
Alignment:
Q  34 atgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttacttctctcaaaactttatccccgagg 133  Q
    ||||||||||||||| |||||||| ||  | || |||||||||||||||||| ||||||||  |||||| |  || || || |||||||| || ||||||    
T  7762981 atgagccaaagacttggtcatatataatgactccaactttgaccacatcgattccgcggttagttccttcgcgacatcccttaaaactttgtcaccgagg 7762882  T
Q  134 cacgagacaatggcactcctggtcttgtccacca 167  Q
    ||| |||||||||||||| | | |||||||||||    
T  7762881 cacaagacaatggcactcttagccttgtccacca 7762848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 29811602 - 29811446
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| || |  ||||||||||||| | || ||||||||  | || |||||||||||||| || || ||||| | |||||| |  || |    
T  29811602 agttgttgcttaaggaattgcttatgagccaaagacctggttatatacaatgactccaactttgaccacatggacgctgcggtaggttccttagcgacat 29811503  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | ||||||||||| || ||||||||| |||||||||||||||| | |||||||||||    
T  29811502 ccctcaaaactttgtcaccgaggcacaagacaatggcactcctagccttgtccacca 29811446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 15830673 - 15830831
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    ||||||| ||||||||||| || || |||| ||| |||||| |||||||||||  | || |||||||||||| |||||| || ||| | |||||| |  |    
T  15830673 taaagttcttgctttaggaattgcctatgaaccatagacttagtcatatacaataactccaactttgaccacctcgatgtcgtggtaggttccttcgcga 15830772  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | || || ||||||||||||  ||||||| |||||||| |||| || |  ||||||||||    
T  15830773 catc-ctgaaaactttatccttgaggcacaagacaatgacacttctagctttgtccacca 15830831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 82
Target Start/End: Complemental strand, 32891823 - 32891752
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatc 82  Q
    ||||||||||| |||| || || |||||||||||| || |||||||||||  | || |||||||||||||||    
T  32891823 agttgttgcttaaggaattgcctatgagccaaagatttggtcatatacaatgactccaactttgaccacatc 32891752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 8516525 - 8516607
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggt 93  Q
    ||||||||||| | || || || |||||||||||| || |||||||| ||  | || ||||||| ||||||||||||||||||    
T  8516525 agttgttgcttcaagagttgcctatgagccaaagatttcgtcatatataatgactctaactttgcccacatcgatgccgcggt 8516607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 93
Target Start/End: Original strand, 32479771 - 32479853
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggt 93  Q
    ||||||||||| | || || || |||||||||||| || |||||||||||  | || ||||||| |||||||||||| |||||    
T  32479771 agttgttgcttcaagagttgcctatgagccaaagatttcgtcatatacaatgactccaactttgcccacatcgatgctgcggt 32479853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 31116396 - 31116339
Alignment:
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccac 165  Q
    ||||||||||||||||||| | ||||||| |||||| | ||||||| | |||||||||    
T  31116396 cttctctcaaaactttatctctgaggcacaagacaaggacactcctagccttgtccac 31116339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 112 - 167
Target Start/End: Original strand, 1312598 - 1312653
Alignment:
Q  112 tctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    ||||||||||||  ||| ||||||| |||||||| ||||||||  |||||||||||    
T  1312598 tctcaaaactttgcccctgaggcacaagacaatgacactcctgaccttgtccacca 1312653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 120; Significance: 1e-61; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 120; E-Value: 1e-61
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 80670 - 80511
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||    
T  80670 taaagttgttgctttaggactttccgttgagccaaagactttgtcatatacaaatattcgaactttgaccacatcgatggcgcggttgtttcctttgcta 80571  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||| ||||||||| |||||||||| |||||||| ||||| ||| |||||||||||    
T  80570 cttctctctaaactttattcccgaggcacaagacaatgacactcatggccttgtccacca 80511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 117; Significance: 7e-60; HSPs: 9)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 117; E-Value: 7e-60
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 36560619 - 36560775
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||| |||| ||||||| ||| |||||||||||||||| |||||||| |||||    
T  36560619 agttgttgctttaggaattgccgatgagccaaagactttgtcatatacaaagattccaactttgcccatatcgatgccgcggttgcttcctttgctactt 36560718  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  36560719 ctctcaaaactttatccccgaggcacaagacaatggcactcctggccttgtccacca 36560775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 6263629 - 6263788
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||| |||     
T  6263629 taaagttgttgctttaggacttgccgatgagccaaagactttgtcatatacaaatatctgaactttgaccacatcgatgccgcggttgtttccttcgttg 6263728  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||| ||||||||| |||||||||| |||||||||||||||| | |||||||||||    
T  6263729 cttctctcgaaactttattcccgaggcacaagacaatggcactcctagccttgtccacca 6263788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 21520172 - 21520328
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||| ||||||| |||||||| |||||    
T  21520172 agttgttgctttaggaattgccgatgagccaaagactttgtcatatacaaagattccaactttggccacatcgatgctgcggttggttcctttgctactt 21520271  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    ||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||    
T  21520272 ctctcaaaaatttatccccgaggcacaagacaatggcactcctggccttgtccacca 21520328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 35217448 - 35217604
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || ||||||||||||||||||||||||||| ||| |||| ||||||| |||||||||||||||||||| |||||||| |||||    
T  35217448 agttgttgctttaggaattgccgatgagccaaagactttgtcatatataaagattccaactttgcccacatcgatgccgcggttgcttcctttgctactt 35217547  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||    
T  35217548 ctctcaaaactttatccccgaggcacaagacaacggcactcctggccttgtccacca 35217604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 112; E-Value: 6e-57
Query Start/End: Original strand, 16 - 167
Target Start/End: Original strand, 19503819 - 19503970
Alignment:
Q  16 ttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttacttctctc 115  Q
    ||||||||||| || |||||||| |||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| |||||||| ||||||||||    
T  19503819 ttgctttaggaattgccgatgaggcaaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttgctacttctctc 19503918  T
Q  116 aaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  19503919 aaaactttatccccgaggcacaagacaatggcactcctggccttgtccacca 19503970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 97; E-Value: 6e-48
Query Start/End: Original strand, 15 - 167
Target Start/End: Original strand, 22405412 - 22405564
Alignment:
Q  15 gttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttacttctct 114  Q
    |||||||||||| || | ||| ||||||||||||||||||||||||| |||| ||||||| ||||||||||| |||||||| |||||| | |||||||||    
T  22405412 gttgctttaggaattgctgataagccaaagactttgtcatatacaaagattccaactttgcccacatcgatgtcgcggttggttccttcgctacttctct 22405511  T
Q  115 caaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||| |||||||||||||||| | |||||||||||    
T  22405512 caaaactttatccccgaggcacaagacaatggcactcctagccttgtccacca 22405564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 5e-39
Query Start/End: Original strand, 11 - 164
Target Start/End: Original strand, 34574636 - 34574789
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||| || ||| || || ||||||||||| |||||||||||||||| | || |||||||||||||||||||||||||||| |||||||| ||| |    
T  34574636 agttgttgcatttggaattgcctatgagccaaaggctttgtcatatacaaagactccaactttgaccacatcgatgccgcggttggttcctttgctacat 34574735  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtcca 164  Q
    |||| |||| ||||||||||||| || |||||||||| || |||||||||||||    
T  34574736 ctctaaaaaatttatccccgaggaacaagacaatggcgcttctggtcttgtcca 34574789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 167
Target Start/End: Complemental strand, 16549163 - 16549103
Alignment:
Q  107 acttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||| ||||||||||||||||||||| ||| ||||||||  |||  |||||||| ||||||    
T  16549163 acttatctcaaaactttatccccgagacacaagacaatgcaacttttggtcttgcccacca 16549103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 19348731 - 19348790
Alignment:
Q  34 atgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggt 93  Q
    |||||||||||| || |||||||||||  | || ||||||| ||||||||||| ||||||    
T  19348731 atgagccaaagatttcgtcatatacaatgactccaactttgcccacatcgatgtcgcggt 19348790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 2e-57; HSPs: 15)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 15 - 167
Target Start/End: Complemental strand, 27827837 - 27827685
Alignment:
Q  15 gttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttacttctct 114  Q
    |||||||||||| || ||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| |||||||| |||||||||    
T  27827837 gttgctttaggaattgccgatgagccaaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttgctacttctct 27827738  T
Q  115 caaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||| |||||||||||||||| | |||||||||||    
T  27827737 caaaactttatccccgaggcacaagacaatggcactcctagccttgtccacca 27827685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 109; E-Value: 4e-55
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 18811564 - 18811408
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||| |||| | ||||| |||||||||||||||||||| |||||||| |||||    
T  18811564 agttgttgctttaggaattgccgatgagccaaagactttgtcatatacaaagattccatctttgcccacatcgatgccgcggttgcttcctttgctactt 18811465  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||||||| |||||||| |||||| || |||||||||||    
T  18811464 ctctcaaaactttatccccgaggcacaagacaatgacactccaggccttgtccacca 18811408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 109; E-Value: 4e-55
Query Start/End: Original strand, 15 - 167
Target Start/End: Complemental strand, 43080454 - 43080302
Alignment:
Q  15 gttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttacttctct 114  Q
    |||| ||||||| || ||||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| |||||||| |||||||||    
T  43080454 gttgttttaggaattgccgatgagccaaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttgctacttctct 43080355  T
Q  115 caaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||| ||||||||| |||||||||||||||||| |||||||||||    
T  43080354 caaaactttatctccgaggcacaagacaatggcactcctggccttgtccacca 43080302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 41383512 - 41383353
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    |||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||     
T  41383512 taaagttgttgctttaggacttgccgatgagtcaaagactttgtcatatacaaatatttgaactttgaccacatcgatgtcgcggttgtttcctttgttg 41383413  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    ||||||||||| |||| | || ||||||| |||||||| ||||||||| |||||||||||    
T  41383412 cttctctcaaatcttttttcctgaggcacaagacaatgacactcctggccttgtccacca 41383353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 15069423 - 15069267
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||| |||| ||| |||| |||||    
T  15069423 agttgttgctttaggaattgccgatgagccaaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcagttggttcatttgctactt 15069324  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    || |||||||||||||||||||| || |||||||||||||||||| |||||||||||    
T  15069323 ctttcaaaactttatccccgaggaacaagacaatggcactcctggccttgtccacca 15069267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 85; E-Value: 8e-41
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 31577771 - 31577927
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || |||| |||||||||||||||||||||||| | | || ||||||||||||||||||| |||  ||| |||||| | ||| |    
T  31577771 agttgttgctttaggaattgccgaagagccaaagactttgtcatatacacagactccaactttgaccacatcgatgacgcaattggttccttcgctacct 31577870  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||||||| |||||||| |||| |||| |||||||||||    
T  31577871 ctctcaaaactttatccccgaggcacaagacaatgacacttctggccttgtccacca 31577927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 3e-40
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 21481355 - 21481196
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    |||| ||||| |||||||| ||  ||||||||||||||||||||||||||||||||||| |||||||||||||| |||| |||||||| ||| || | ||    
T  21481355 taaaattgtttctttaggaattggcgatgagccaaagactttgtcatatacaaatattcgaactttgaccacattgatgtcgcggttggttcattcgcta 21481256  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||| |||||| ||||||||| | |||||||||||| ||| |||| ||||||    
T  21481255 cttctctcaaaaatttatctccgaggcacaaaacaatggcactcttggccttgcccacca 21481196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 69; E-Value: 3e-31
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 34255941 - 34256097
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| || || ||||||||||||||| |||||||||||  | || |||||||||||||||||||  ||||||| |||||| |  || |    
T  34255941 agttgttgcttaaggaattgcctatgagccaaagacttggtcatatacaacgactccaactttgaccacatcgatgttgcggttggttccttcgcgacat 34256040  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | ||||||||||| |||||||||||| |||||||||||||| | | |||||||||||    
T  34256041 ccctcaaaactttgtccccgaggcacaagacaatggcactcatagccttgtccacca 34256097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 5e-30
Query Start/End: Original strand, 11 - 153
Target Start/End: Complemental strand, 5591618 - 5591476
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| || || |||||||||||||||  ||||||||||  | || ||||||||||||||||| |||||||||| |||||| |  || |    
T  5591618 agttgttgcttaaggaattgcctatgagccaaagacttgatcatatacaatgactccaactttgaccacatcgacgccgcggttggttccttcgcgacat 5591519  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcct 153  Q
    | |||||||||||||| ||||||||| ||||||||||||||||    
T  5591518 ccctcaaaactttatcaccgaggcacaagacaatggcactcct 5591476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 7e-23
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 17848382 - 17848300
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggt 93  Q
    |||||||||||||||| ||||||||||||||||||  |||||||||||||| | || |||||||||||||||||| |||||||    
T  17848382 agttgttgctttaggaatttccgatgagccaaagagattgtcatatacaaagactccaactttgaccacatcgattccgcggt 17848300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 11 - 165
Target Start/End: Complemental strand, 4732391 - 4732237
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| || || ||||||||||||||| |||||||||||    || ||||||||||||||||| ||| |||| | |||||| |  || |    
T  4732391 agttgttgcttaaggaattgcctatgagccaaagacttggtcatatacaatgtctccaactttgaccacatcgacgccacggtaggttccttcgcgacat 4732292  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccac 165  Q
    | ||||||||||| || |||||||||  ||||||| ||||||| | |||||||||    
T  4732291 ccctcaaaactttgtcaccgaggcacatgacaatgacactcctagccttgtccac 4732237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 10684920 - 10684838
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggt 93  Q
    ||||||||||| | || || || |||||||||||| || |||||||||||  | || ||||||| ||||||||||||||||||    
T  10684920 agttgttgcttcaagagttgcctatgagccaaagatttcgtcatatacaatgactccaactttgcccacatcgatgccgcggt 10684838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 167
Target Start/End: Complemental strand, 17848288 - 17848189
Alignment:
Q  68 aactttgaccacatcgatgccgcggttgtttcctttgttacttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||| ||||| ||| |||||| | ||  |  || |||||||||||| |||||||  ||||||||||| || ||| |||| ||||||    
T  17848288 aactttgaccacatcgattccgcgattggttccttcgctaaatgacttaaaactttatcctcgaggcaaaagacaatggcattcttgggcttgcccacca 17848189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 34 - 93
Target Start/End: Original strand, 35744844 - 35744903
Alignment:
Q  34 atgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggt 93  Q
    |||||||||||| || |||||||||||  | || ||||||| ||||||||||||||||||    
T  35744844 atgagccaaagatttcgtcatatacaatgactccaactttgcccacatcgatgccgcggt 35744903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 28; E-Value: 0.0000009
Query Start/End: Original strand, 116 - 167
Target Start/End: Original strand, 13985406 - 13985457
Alignment:
Q  116 aaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||| |||||||||||||||| |||||||| ||||| | | |||||||||||    
T  13985406 aaaaatttatccccgaggcacaagacaatgacactcttagccttgtccacca 13985457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1674 (Bit Score: 112; Significance: 6e-57; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 112; E-Value: 6e-57
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 927 - 1086
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||| ||||||||||||||||| |     
T  927 taaagttgttgctttaggactttccgataagccaaagactttgtcatatacaaaaattcaaaatttgaccacatcgatgacgcggttgtttcctttgctg 1026  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||| ||||||||| |||||||||  |||||||||||||||||| |||||| ||||    
T  1027 cttctctcgaaactttatacccgaggcaaaagacaatggcactcctggccttgtcgacca 1086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 112; Significance: 6e-57; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 112; E-Value: 6e-57
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 50822 - 50663
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| || || |||| ||    
T  50822 taaagttgttgctttaggacttgccgatgagccaaagactttgtcatatacaaatattcgatctttgaccacatcgatgccgcggtagtatcttttgcta 50723  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    ||||||||||||||||||||||||||  | |||||||||||||| ||| |||||||||||    
T  50722 cttctctcaaaactttatccccgaggagcaagacaatggcactcatggccttgtccacca 50663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1899 (Bit Score: 109; Significance: 4e-55; HSPs: 1)
Name: scaffold1899
Description:

Target: scaffold1899; HSP #1
Raw Score: 109; E-Value: 4e-55
Query Start/End: Original strand, 15 - 167
Target Start/End: Complemental strand, 421 - 269
Alignment:
Q  15 gttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttacttctct 114  Q
    |||||||||||| || |||||||||||||| |||||||||||||||| |||| ||||||| ||||||||||||| |||||| |||||||| |||||||||    
T  421 gttgctttaggaattgccgatgagccaaaggctttgtcatatacaaagattccaactttgcccacatcgatgccacggttgcttcctttgctacttctct 322  T
Q  115 caaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||    
T  321 caaaactttatccccgaggcacaagacaatggcactcctggccttgtccacca 269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 109; Significance: 4e-55; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 109; E-Value: 4e-55
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 22927 - 22771
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||| |||| ||||||| ||| |||||||||||||||| |||||||| |||||    
T  22927 agttgttgctttaggaattgccgatgagccaaagactttgtcatatacaaagattccaactttgcccatatcgatgccgcggttgcttcctttgctactt 22828  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||||||| |||||| |||||||| || |||||||||||    
T  22827 ctctcaaaactttatccccgaggcacaagacaacggcactccgggccttgtccacca 22771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 105; Significance: 1e-52; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 15 - 167
Target Start/End: Original strand, 26932045 - 26932197
Alignment:
Q  15 gttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttacttctct 114  Q
    |||||||||||| || ||||||||||||||||||||||||||||||| |||  ||||||| ||||| |||||||||||||| |||||||| |||||||||    
T  26932045 gttgctttaggaattgccgatgagccaaagactttgtcatatacaaagatttcaactttgcccacaacgatgccgcggttgcttcctttgctacttctct 26932144  T
Q  115 caaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||| |||||| ||||||||||| |||||||||||    
T  26932145 caaaactttatccccgaggcacaagacaacggcactcctggccttgtccacca 26932197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 33309690 - 33309534
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||| |||| ||||||| ||| |||||||| ||||||| |||||||| |||||    
T  33309690 agttgttgctttaggaattgccgatgagccaaagactttgtcatatacaaagattccaactttgcccatatcgatgctgcggttgcttcctttgctactt 33309591  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||||||| |||||| | ||||||||| |||||||||||    
T  33309590 ctctcaaaactttatccccgaggcacaagacaacgacactcctggccttgtccacca 33309534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 2e-50
Query Start/End: Original strand, 15 - 167
Target Start/End: Original strand, 26067877 - 26068029
Alignment:
Q  15 gttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttacttctct 114  Q
    |||||||||||| || | ||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||| |||||||| ||||||| |    
T  26067877 gttgctttaggaattgctgatgagccaaagactttgtcatatacaaagattccaactttgcccacatcgatgccgcggttgcttcctttgctacttctat 26067976  T
Q  115 caaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||| |||||| | ||||||||| |||||||||||    
T  26067977 caaaactttatccccgaggcacaagacaacgacactcctggccttgtccacca 26068029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 17012867 - 17012708
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    ||||||||||||||| ||| || ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||| |||| |||||||| ||    
T  17012867 taaagttgttgcttttggaattgccgatgagccaaagactttatcatatacaaatattcgaactttgaccacatcgatgtcgcagttggttcctttgcta 17012768  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||| |||||||||| || | |||||||| ||||||| ||| || ||| |||||||||||    
T  17012767 cttccctcaaaacttaattctcgaggcacaagacaatagcaatcatggccttgtccacca 17012708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 8 - 167
Target Start/End: Complemental strand, 26944328 - 26944169
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    ||||||||| ||||||||| ||  |||| |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||| | ||    
T  26944328 taaagttgtcgctttaggaattgtcgataagccaaagactttgtcatatacaaatattcgaactttgaccacatcgatggcgcggttggttccttcgcta 26944229  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
      ||||||||||||||||  ||||||||| ||||||||| ||||| || |||||||||||    
T  26944228 tatctctcaaaactttatttccgaggcacaagacaatggtactccgggccttgtccacca 26944169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 85; E-Value: 8e-41
Query Start/End: Original strand, 8 - 136
Target Start/End: Complemental strand, 3395200 - 3395072
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    ||||||||||||||||||| || || |||||||||||||||||||||||||||| |||| |||||||  ||||||||||| ||||||| ||||||||  |    
T  3395200 taaagttgttgctttaggaattgccaatgagccaaagactttgtcatatacaaagattccaactttgcacacatcgatgcggcggttggttcctttgcca 3395101  T
Q  108 cttctctcaaaactttatccccgaggcac 136  Q
    |||||||||||||||||||||||||||||    
T  3395100 cttctctcaaaactttatccccgaggcac 3395072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 3e-40
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 3631418 - 3631577
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    ||||||| ||||||||||| ||   |||||| ||||||||||||||||||||||  ||| ||||||| |||||||||||| ||||| | |||||| | ||    
T  3631418 taaagttattgctttaggaattgttgatgagtcaaagactttgtcatatacaaagcttccaactttggccacatcgatgctgcggtggattccttcgcta 3631517  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    ||| ||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||    
T  3631518 cttttctcaaaactttatccccgaggcacaagacaatgacactcctggccttgtccacca 3631577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 8 - 112
Target Start/End: Original strand, 15534077 - 15534181
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||| ||    
T  15534077 taaagttgttgctttaggacttgccaatgagccaaagactttgtcatatacaaatattcgaactttgaccacatcgatgtcgcggttggttcctttgcta 15534176  T
Q  108 cttct 112  Q
    |||||    
T  15534177 cttct 15534181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 81; E-Value: 2e-38
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 25462943 - 25463099
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || |||||||||| |||||||||||||||||||| | |  |||||| || |||||||||||||| ||| ||| || | ||| |    
T  25462943 agttgttgctttaggaattgccgatgagcctaagactttgtcatatacaaagactataactttaactacatcgatgccgcgtttggttctttcgctacat 25463042  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||||||||||||| |||||||||||||| ||| |||||| ||||    
T  25463043 ctctcaaaactttatccccgaggcacaagacaatggcactcttggccttgtctacca 25463099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 77; E-Value: 5e-36
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 5408504 - 5408660
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| || || |||||||||||||||||||||||||||  | || ||||||||||||||||||| |||||||  |||||| |  || |    
T  5408504 agttgttgcttaaggaattgcctatgagccaaagactttgtcatatacaacgactccaactttgaccacatcgatgtcgcggttagttccttcgcgacat 5408603  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | ||||||||||| |||||||||||| |||||||||||||||| | |||||||||||    
T  5408604 ccctcaaaactttgtccccgaggcacaagacaatggcactcctagccttgtccacca 5408660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 77; E-Value: 5e-36
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 5412829 - 5412985
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| || || |||||||||||||||||||||||||||  | || ||||||||||||||||||| |||||||  |||||| |  || |    
T  5412829 agttgttgcttaaggaattgcctatgagccaaagactttgtcatatacaacgactccaactttgaccacatcgatgtcgcggttagttccttcgcgacat 5412928  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | ||||||||||| |||||||||||| |||||||||||||||| | |||||||||||    
T  5412929 ccctcaaaactttgtccccgaggcacaagacaatggcactcctagccttgtccacca 5412985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 73; E-Value: 1e-33
Query Start/End: Original strand, 11 - 151
Target Start/End: Original strand, 12936727 - 12936867
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || || |||||||||||| ||||||||||||||| | || ||||||||||||||||||| |||||||| ||| || | ||| |    
T  12936727 agttgttgctttaggaattgccaatgagccaaagattttgtcatatacaaagactccaactttgaccacatcgatggcgcggttggttctttcgctacat 12936826  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactc 151  Q
    ||||||||||||||||||  |||||| |||||||| |||||    
T  12936827 ctctcaaaactttatccctaaggcacaagacaatgacactc 12936867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 16 - 167
Target Start/End: Complemental strand, 12158047 - 12157896
Alignment:
Q  16 ttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttacttctctc 115  Q
    ||||||||||| || || |||||||||||||||||||||||||||  | || ||||||||||||||||||| |||| ||| |||||| |  || || | |    
T  12158047 ttgctttaggaattgccaatgagccaaagactttgtcatatacaatgactccaactttgaccacatcgatgtcgcgtttggttccttagcgacatccccc 12157948  T
Q  116 aaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||| |||||||||||  |||||||| ||||||| | |||||||||||    
T  12157947 aaaactttttccccgaggcataagacaatgtcactcctagccttgtccacca 12157896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 11 - 165
Target Start/End: Complemental strand, 16553409 - 16553255
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| ||  | ||||||||| ||||| |||||||||||  |||| ||||| ||||| |||||||||||||||| |||||| |  || |    
T  16553409 agttgttgcttaaggaattgtctatgagccaacgacttggtcatatacaacgattccaacttagaccatatcgatgccgcggttggttccttcgcgacat 16553310  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccac 165  Q
    | ||||||||||| |||||||||||| |||||||||| ||||| | |||||||||    
T  16553309 ccctcaaaactttgtccccgaggcacaagacaatggcgctcctcgccttgtccac 16553255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 11 - 165
Target Start/End: Complemental strand, 16629965 - 16629811
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| ||  | ||||||||| ||||| |||||||||||  |||| ||||| ||||| |||||||||||||||| |||||| |  || |    
T  16629965 agttgttgcttaaggaattgtctatgagccaacgacttggtcatatacaacgattccaacttagaccatatcgatgccgcggttggttccttcgcgacat 16629866  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccac 165  Q
    | ||||||||||| |||||||||||| |||||||||| ||||| | |||||||||    
T  16629865 ccctcaaaactttgtccccgaggcacaagacaatggcgctcctcgccttgtccac 16629811  T

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Target: chr6; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 34165617 - 34165461
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| || || ||||||||| ||||| |||||||||||  |||| ||||| ||||| ||||||||||| |||| |||||| |  || |    
T  34165617 agttgttgcttaaggaattgcctatgagccaacgacttggtcatatacaacgattccaacttagaccatatcgatgccgcagttggttccttcgcgacat 34165518  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | ||||||||||| ||||||||||||  ||||||||| ||||| | |||||||||||    
T  34165517 ccctcaaaactttgtccccgaggcacaggacaatggcgctcctcgccttgtccacca 34165461  T

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Target: chr6; HSP #17
Raw Score: 57; E-Value: 4e-24
Query Start/End: Original strand, 71 - 167
Target Start/End: Complemental strand, 11137312 - 11137216
Alignment:
Q  71 tttgaccacatcgatgccgcggttgtttcctttgttacttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    ||||||||||  ||||| || ||||||||||||| ||| ||||||||||||||||||| ||||||| |||||||||||||||| | |||||||||||    
T  11137312 tttgaccacacagatgcagcagttgtttcctttgctacatctctcaaaactttatccctgaggcacaagacaatggcactcctagccttgtccacca 11137216  T

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Target: chr6; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 68 - 151
Target Start/End: Original strand, 12911093 - 12911176
Alignment:
Q  68 aactttgaccacatcgatgccgcggttgtttcctttgttacttctctcaaaactttatccccgaggcacgagacaatggcactc 151  Q
    ||||||||||||||||||| |||||||| ||| || | ||| ||||||||||||||||||| ||||||| |||||||| |||||    
T  12911093 aactttgaccacatcgatggcgcggttggttctttcgctacatctctcaaaactttatccctgaggcacaagacaatgacactc 12911176  T

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Target: chr6; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 131
Target Start/End: Complemental strand, 30444071 - 30443974
Alignment:
Q  34 atgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttacttctctcaaaactttatccccga 131  Q
    ||||||||||||||| |||||||||||  | || |||||||||||||||||||||| ||||| |||||| | ||  |||||||||| ||| |||||||    
T  30444071 atgagccaaagacttggtcatatacaacgactccaactttgaccacatcgatgccgtggttggttccttcgctatatctctcaaaattttgtccccga 30443974  T

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Target: chr6; HSP #20
Raw Score: 44; E-Value: 2e-16
Query Start/End: Original strand, 11 - 130
Target Start/End: Complemental strand, 16651669 - 16651550
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| ||  | ||||||||| ||||| |||||||||||  |||| ||||| ||||| |||||||||||||||| |||||| |  || |    
T  16651669 agttgttgcttaaggaattgtctatgagccaacgacttggtcatatacaacgattccaacttagaccatatcgatgccgcggttggttccttcgcgacat 16651570  T
Q  111 ctctcaaaactttatccccg 130  Q
    | ||||||||||| ||||||    
T  16651569 ccctcaaaactttgtccccg 16651550  T

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Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 12911051 - 12911093
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtca 53  Q
    |||||||||||||||| || || ||||||||||||||||||||    
T  12911051 agttgttgctttaggaattcccaatgagccaaagactttgtca 12911093  T

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Target: scaffold0025 (Bit Score: 97; Significance: 6e-48; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 97; E-Value: 6e-48
Query Start/End: Original strand, 11 - 167
Target Start/End: Original strand, 72995 - 73151
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || |||||||| |||||| ||||||||||||||| |||| ||||||| |||||| |||||||| |||  |||||||| |||||    
T  72995 agttgttgctttaggaattgccgatgagtcaaagattttgtcatatacaaagattccaactttgcccacatagatgccgcagttcgttcctttgctactt 73094  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||||||||||| ||||||||| |||||||||||||||||| |||||||||||    
T  73095 ctctcaaaactttatctccgaggcacaagacaatggcactcctggccttgtccacca 73151  T

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Target: scaffold0011 (Bit Score: 97; Significance: 6e-48; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 97; E-Value: 6e-48
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 34351 - 34195
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||  ||||||||||||| |||||    
T  34351 agttgttgctttaggaattgccgatgagccaaagactttgtcatatacaaagattccaactttgcccacatcgatgccgttgttgtttcctttgctactt 34252  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||| ||||||||||| ||||||||| ||||| || ||||||| | |||||||||||    
T  34251 ctcttaaaactttatctccgaggcacaagacattgtcactccttgccttgtccacca 34195  T

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Target: scaffold0133 (Bit Score: 88; Significance: 1e-42; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 88; E-Value: 1e-42
Query Start/End: Original strand, 8 - 167
Target Start/End: Original strand, 26365 - 26524
Alignment:
Q  8 taaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgtta 107  Q
    ||||||||||||||| ||| || ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||| ||| |||| |||||||| ||    
T  26365 taaagttgttgcttttggaattgccgatgagccaaagactttatcatatacaaatattcgaactttgaccacatcgatgtcgcagttggttcctttgcta 26464  T
Q  108 cttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||| |||||||||| || | |||||||| ||||||| ||| || ||| |||||||||||    
T  26465 cttccctcaaaacttaattctcgaggcacaagacaatagcaatcatggccttgtccacca 26524  T

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Target: scaffold0016 (Bit Score: 65; Significance: 7e-29; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 65; E-Value: 7e-29
Query Start/End: Original strand, 11 - 167
Target Start/End: Complemental strand, 115336 - 115180
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggttgtttcctttgttactt 110  Q
    ||||||||||| |||| ||  | ||||||||||||||| |||||||||||  | |  |||||||||||| ||||||||||||||| |||||| |  || |    
T  115336 agttgttgcttaaggaattgtctatgagccaaagacttggtcatatacaatgactacaactttgaccacgtcgatgccgcggttggttccttcgcgacat 115237  T
Q  111 ctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    | ||||||||||| || ||||||||| |||||||||||||||| | |||||||||||    
T  115236 cgctcaaaactttgtcaccgaggcacaagacaatggcactcctagccttgtccacca 115180  T

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Target: scaffold0127 (Bit Score: 55; Significance: 7e-23; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 55; E-Value: 7e-23
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 12439 - 12509
Alignment:
Q  97 ttcctttgttacttctctcaaaactttatccccgaggcacgagacaatggcactcctggtcttgtccacca 167  Q
    |||||||| ||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||||    
T  12439 ttcctttgctacttctctcaaaactttatccccgaggcacaagacaacggcactcctggccttgtccacca 12509  T

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Target: scaffold0197 (Bit Score: 35; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 35; E-Value: 0.00000000006
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 14965 - 14883
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggt 93  Q
    ||||||||||| | || || || |||||||||||| || |||||||||||  | || ||||||| ||||||||||||||||||    
T  14965 agttgttgcttcaagagttgcctatgagccaaagatttcgtcatatacaatgactccaactttgcccacatcgatgccgcggt 14883  T

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Target: scaffold0355 (Bit Score: 32; Significance: 0.000000003; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 32; E-Value: 0.000000003
Query Start/End: Original strand, 7 - 86
Target Start/End: Complemental strand, 537 - 458
Alignment:
Q  7 ataaagttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatg 86  Q
    ||||||||||||||| | || || || |||||||||||| || |||||||||||  | || ||||||| |||||||||||    
T  537 ataaagttgttgcttcaagagttgcctatgagccaaagatttcgtcatatacaatgactccaactttgcccacatcgatg 458  T

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Target: scaffold0028 (Bit Score: 31; Significance: 0.00000001; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 31; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 93
Target Start/End: Complemental strand, 149611 - 149529
Alignment:
Q  11 agttgttgctttaggactttccgatgagccaaagactttgtcatatacaaatattcaaactttgaccacatcgatgccgcggt 93  Q
    ||||||||||| | || || || |||||||||||| || |||||||||||  | || ||||||| |||||| |||||||||||    
T  149611 agttgttgcttcaagagttgcctatgagccaaagatttcgtcatatacaatgactccaactttgcccacattgatgccgcggt 149529  T

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