View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5175-Insertion-5 (Length: 776)

Name: NF5175-Insertion-5
Description: NF5175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5175-Insertion-5
NF5175-Insertion-5
[»] chr5 (5 HSPs)
chr5 (270-776)||(36488778-36489295)
chr5 (12-204)||(36489361-36489556)
chr5 (336-379)||(29858620-29858663)
chr5 (323-379)||(17065244-17065300)
chr5 (336-378)||(19935968-19936010)
[»] chr4 (3 HSPs)
chr4 (281-379)||(13336945-13337043)
chr4 (271-379)||(44453065-44453173)
chr4 (280-379)||(41068851-41068950)
[»] chr7 (7 HSPs)
chr7 (271-379)||(4407394-4407502)
chr7 (312-379)||(3997145-3997212)
chr7 (271-379)||(4463415-4463523)
chr7 (323-379)||(11842792-11842848)
chr7 (323-379)||(15468240-15468296)
chr7 (271-379)||(28937333-28937442)
chr7 (468-544)||(31911407-31911483)
[»] chr1 (2 HSPs)
chr1 (271-379)||(3833411-3833519)
chr1 (271-379)||(31893099-31893206)
[»] chr2 (4 HSPs)
chr2 (270-379)||(28948855-28948964)
chr2 (336-379)||(5252073-5252116)
chr2 (280-377)||(24360852-24360949)
chr2 (295-379)||(21565867-21565952)
[»] chr6 (3 HSPs)
chr6 (336-379)||(23402045-23402088)
chr6 (347-379)||(15561988-15562020)
chr6 (323-379)||(15828246-15828302)
[»] chr8 (4 HSPs)
chr8 (311-379)||(19742067-19742135)
chr8 (281-379)||(24527763-24527861)
chr8 (308-375)||(16290878-16290946)
chr8 (311-379)||(24184735-24184804)
[»] scaffold0356 (1 HSPs)
scaffold0356 (280-379)||(13719-13818)
[»] chr3 (1 HSPs)
chr3 (271-378)||(2899914-2900021)
[»] scaffold0114 (1 HSPs)
scaffold0114 (281-379)||(10831-10929)


Alignment Details
Target: chr5 (Bit Score: 324; Significance: 0; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 270 - 776
Target Start/End: Complemental strand, 36489295 - 36488778
Alignment:
Q  270 attaataaatatttagagtttgatgggcaaaggacgatggtttcccgggatgtcaacctaattagaatgtcggtgttgcctcctgatgtttgtctttctc 369  Q
    |||||||||| ||||||||||   || || |||||| |||||| || |||||||||||||||| | | ||||||||| ||||||||||||||||||||||    
T  36489295 attaataaatttttagagtttagcggacagaggacggtggttttccaggatgtcaacctaattgggacgtcggtgttacctcctgatgtttgtctttctc 36489196  T
Q  370 cctgcttagcnnnnnnntaataatattgttgaagggagggttatgttatat----ctactgtatgtaccaatttcttagctacatacaaatttagtacac 465  Q
     |||||||||        || |||||||| |||||||||||||||||||||    ||||||||||||||||||| |||||||||||||||||||||||||    
T  36489195 actgcttagcaaaaaaaaaagaatattgtcgaagggagggttatgttatatatatctactgtatgtaccaattttttagctacatacaaatttagtacac 36489096  T
Q  466 ctattgatacaaactctagaagttggaatactaaccttctttggaatttatttagtgagatagatgtacatgaaattctcaacattccgtgaactaatct 565  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  36489095 ctattgatacaaactctagaagtttgaatactaaccttctttggaatttatttagtgagatagatgtacatgaagttctcaacattccgtgaactaatct 36488996  T
Q  566 tgcaagaaaggatgcaataatgtgaagattcgtcaag-aaaggtctatatttagtcaaaggtggttattgagtttgtgttgacattatcataaataggga 664  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  36488995 tgcaagaaaggatgcaataatatgaagattcgtcaagaaaaggtctatatttagtcaaaagtgcttattgagtttgtgttgacattatcataaataggga 36488896  T
Q  665 tg----attagaaactgggaagagattggaacaagatggggtcactt--catccctccaaaggttaaaccttttatatggcctcttggtgttaggggaaa 758  Q
    ||    ||||||||| || ||||||||||||||||||| ||||||||  ||||||||| |||||||||| |||||| ||||||||||||||||||||| |    
T  36488895 tgattaattagaaacgggaaagagattggaacaagatgtggtcacttcccatccctccgaaggttaaacattttatgtggcctcttggtgttaggggata 36488796  T
Q  759 acagtttttgttagggtt 776  Q
    ||||||||||||||||||    
T  36488795 acagtttttgttagggtt 36488778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 174; E-Value: 3e-93
Query Start/End: Original strand, 12 - 204
Target Start/End: Complemental strand, 36489556 - 36489361
Alignment:
Q  12 ctatcccttcttattgtattagtgtatttctattacatcattcctttgcagaaaagat---tgaaaaaatgttacactcttttcaaagctatatacctgt 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||| |||||||||||||||||||||||||||||    
T  36489556 ctatcccttcttattgtattagtgtatttctattacatcattcctttgcagaaaagatgattgaaaaaatattacactcttttcaaagctatatacctgt 36489457  T
Q  109 ttaatagggattttttgggagtgtcttttaggacataatcctatctttgtttgacgtagaatttggtcttctcaacaatgtcaacataatcctata 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  36489456 ttaatagggattttttgggagtgtcttttaggacataatcctatctttgtttgatgtagaatttggtcttctcaacaatgtcaacataatcctata 36489361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 336 - 379
Target Start/End: Original strand, 29858620 - 29858663
Alignment:
Q  336 atgtcggtgttgcctcctgatgtttgtctttctccctgcttagc 379  Q
    |||||||||| |||||||||||| ||||||||||||||||||||    
T  29858620 atgtcggtgtggcctcctgatgtctgtctttctccctgcttagc 29858663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 17065300 - 17065244
Alignment:
Q  323 caacctaattagaatgtcggtgttgcctcctgatgtttgtctttctccctgcttagc 379  Q
    ||||||| || | |||| ||||| |||||||||||| ||||||||||||||||||||    
T  17065300 caacctagttgggatgttggtgtggcctcctgatgtctgtctttctccctgcttagc 17065244  T

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Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 336 - 378
Target Start/End: Complemental strand, 19936010 - 19935968
Alignment:
Q  336 atgtcggtgttgcctcctgatgtttgtctttctccctgcttag 378  Q
    ||||||||||||||||||||||| |||||  ||||||||||||    
T  19936010 atgtcggtgttgcctcctgatgtctgtctcactccctgcttag 19935968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 2e-17; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 281 - 379
Target Start/End: Original strand, 13336945 - 13337043
Alignment:
Q  281 tttagagtttgatgggcaaaggacgatggtttcccgggatgtcaacctaattagaatgtcggtgttgcctcctgatgtttgtctttctccctgcttagc 379  Q
    |||||||||| | ||||| ||||||  || |||||||| |||||| ||| || | |||||||||| |||||||||||| ||||||||||||||||||||    
T  13336945 tttagagtttaacgggcataggacggaggcttcccggggtgtcaatctagttgggatgtcggtgtggcctcctgatgtctgtctttctccctgcttagc 13337043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 271 - 379
Target Start/End: Complemental strand, 44453173 - 44453065
Alignment:
Q  271 ttaataaatatttagagtttgatgggcaaaggacgatggtttcccgggatgtcaacctaattagaatgtcggtgttgcctcctgatgtttgtctttctcc 370  Q
    ||||||||  |||||||||||| ||| | ||||||  || |||||||| || ||||||| || | |||||| ||| |||||||||||| |||||||||||    
T  44453173 ttaataaaattttagagtttgacgggtataggacggaggcttcccggggtgccaacctagttgggatgtcgatgtggcctcctgatgtctgtctttctcc 44453074  T
Q  371 ctgcttagc 379  Q
    |||||||||    
T  44453073 ctgcttagc 44453065  T

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Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 280 - 379
Target Start/End: Original strand, 41068851 - 41068950
Alignment:
Q  280 atttagagtttgatgggcaaaggacgatggtttcccgggatgtcaacctaattagaatgtcggtgttgcctcctgatgtttgtctttctccctgcttagc 379  Q
    ||||||||||||   |||| ||||||  || ||||||||||| ||||| | || | |||||||||||||||| |||||  ||||| ||||||||||||||    
T  41068851 atttagagtttggcaggcataggacggaggcttcccgggatgccaacccagttgggatgtcggtgttgcctcatgatgcctgtctctctccctgcttagc 41068950  T

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Target: chr7 (Bit Score: 45; Significance: 3e-16; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 271 - 379
Target Start/End: Complemental strand, 4407502 - 4407394
Alignment:
Q  271 ttaataaatatttagagtttgatgggcaaaggacgatggtttcccgggatgtcaacctaattagaatgtcggtgttgcctcctgatgtttgtctttctcc 370  Q
    ||||||||  |||||||||||| ||||| ||||||  || || | ||| || ||||||| || | |||||||||| |||||||||||| |||||||||||    
T  4407502 ttaataaaattttagagtttgacgggcataggacggaggctttctggggtgccaacctagttgggatgtcggtgtggcctcctgatgtctgtctttctcc 4407403  T
Q  371 ctgcttagc 379  Q
    |||||||||    
T  4407402 ctgcttagc 4407394  T

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Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 312 - 379
Target Start/End: Complemental strand, 3997212 - 3997145
Alignment:
Q  312 tcccgggatgtcaacctaattagaatgtcggtgttgcctcctgatgtttgtctttctccctgcttagc 379  Q
    |||||||||| ||||||| || | ||||||||||||||||||||||| ||||| |||| |||||||||    
T  3997212 tcccgggatgccaacctagttgggatgtcggtgttgcctcctgatgtctgtctgtctctctgcttagc 3997145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 271 - 379
Target Start/End: Complemental strand, 4463523 - 4463415
Alignment:
Q  271 ttaataaatatttagagtttgatgggcaaaggacgatggtttcccgggatgtcaacctaattagaatgtcggtgttgcctcctgatgtttgtctttctcc 370  Q
    ||||||||  |||||||||||  ||||| |||| |  || |||| ||| || ||||||| || | ||||| |||| |||||||||||| |||||||||||    
T  4463523 ttaataaaattttagagtttggcgggcataggatggaggcttcctggggtgccaacctagttgggatgtcagtgtggcctcctgatgtctgtctttctcc 4463424  T
Q  371 ctgcttagc 379  Q
    |||||||||    
T  4463423 ctgcttagc 4463415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 11842792 - 11842848
Alignment:
Q  323 caacctaattagaatgtcggtgttgcctcctgatgtttgtctttctccctgcttagc 379  Q
    ||||||| || | ||||||||||||| ||||||||||||||| ||||||||||||||    
T  11842792 caacctagttgggatgtcggtgttgcttcctgatgtttgtctgtctccctgcttagc 11842848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 323 - 379
Target Start/End: Complemental strand, 15468296 - 15468240
Alignment:
Q  323 caacctaattagaatgtcggtgttgcctcctgatgtttgtctttctccctgcttagc 379  Q
    ||||||| || | |||||||||| |||||||||||| ||||||||||||||||||||    
T  15468296 caacctagttgggatgtcggtgtggcctcctgatgtctgtctttctccctgcttagc 15468240  T

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Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 271 - 379
Target Start/End: Original strand, 28937333 - 28937442
Alignment:
Q  271 ttaataaatatttagagtttgatgggcaaaggacgatggtttcccgggatgtcaacctaattagaatgtcggtgttgcct-cctgatgtttgtctttctc 369  Q
    ||||||||  |||||||||||| ||||| |||| |  || || |||||||| ||||||| || | |||||||||| |||| |||||||| ||||||| ||    
T  28937333 ttaataaaattttagagtttgacgggcataggatggaggctttccgggatgccaacctagttgggatgtcggtgtggcctccctgatgtctgtctttttc 28937432  T
Q  370 cctgcttagc 379  Q
    | ||||||||    
T  28937433 cttgcttagc 28937442  T

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Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 468 - 544
Target Start/End: Complemental strand, 31911483 - 31911407
Alignment:
Q  468 attgatacaaactctagaagttggaatactaaccttctttggaatttatttagtgagatagatgtacatgaaattct 544  Q
    ||||||||||||||||||| || ||||||||||||| ||   ||| |||||| ||||| ||||| | ||||||||||    
T  31911483 attgatacaaactctagaaattagaatactaaccttattcataatatatttaatgagagagatgcaaatgaaattct 31911407  T

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Target: chr1 (Bit Score: 45; Significance: 3e-16; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 271 - 379
Target Start/End: Complemental strand, 3833519 - 3833411
Alignment:
Q  271 ttaataaatatttagagtttgatgggcaaaggacgatggtttcccgggatgtcaacctaattagaatgtcggtgttgcctcctgatgtttgtctttctcc 370  Q
    ||||||||  ||||||||| || ||||| ||||||  || |||||||| || ||||||| || | |||||||||| |||||||||||| |||||||||||    
T  3833519 ttaataaaattttagagttagacgggcataggacggaggcttcccggggtgccaacctagttgggatgtcggtgtagcctcctgatgtctgtctttctcc 3833420  T
Q  371 ctgcttagc 379  Q
     ||||||||    
T  3833419 atgcttagc 3833411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 271 - 379
Target Start/End: Original strand, 31893099 - 31893206
Alignment:
Q  271 ttaataaatatttagagtttgatgggcaaaggacgatggtttcccgggatgtcaacctaattagaatgtcggtgttgcctcctgatgtttgtctttctcc 370  Q
    ||||||||  |||||||||||| ||||| |||| |  || ||| ||||||| ||||||| || | |||||||||| |||||||||||| |||||| ||||    
T  31893099 ttaataaaattttagagtttgacgggcataggatggaggcttctcgggatgccaacctagttgggatgtcggtgt-gcctcctgatgtctgtcttcctcc 31893197  T
Q  371 ctgcttagc 379  Q
    |||||||||    
T  31893198 ctgcttagc 31893206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 270 - 379
Target Start/End: Original strand, 28948855 - 28948964
Alignment:
Q  270 attaataaatatttagagtttgatgggcaaaggacgatggtttcccgggatgtcaacctaattagaatgtcggtgttgcctcctgatgtttgtctttctc 369  Q
    |||||||||| |||||||||||   |||| ||||||  ||||||||||| || |||| || || | |||||||||||| |||||||||| |||  |||||    
T  28948855 attaataaatttttagagtttggcaggcagaggacggaggtttcccggggtgccaacatagttgggatgtcggtgttgtctcctgatgtctgttattctc 28948954  T
Q  370 cctgcttagc 379  Q
    ||||||||||    
T  28948955 cctgcttagc 28948964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 336 - 379
Target Start/End: Complemental strand, 5252116 - 5252073
Alignment:
Q  336 atgtcggtgttgcctcctgatgtttgtctttctccctgcttagc 379  Q
    |||||||||| |||||||||||| ||||||||||||||||||||    
T  5252116 atgtcggtgtggcctcctgatgtctgtctttctccctgcttagc 5252073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 377
Target Start/End: Complemental strand, 24360949 - 24360852
Alignment:
Q  280 atttagagtttgatgggcaaaggacgatggtttcccgggatgtcaacctaattagaatgtcggtgttgcctcctgatgtttgtctttctccctgctta 377  Q
    ||||||||||||   |||| ||||| | || ||||||||||| |||||||  | | ||||||||||||  ||||||||| ||||||||||| ||||||    
T  24360949 atttagagtttggcaggcataggacaaaggcttcccgggatgccaacctagctgggatgtcggtgttgtttcctgatgtctgtctttctccttgctta 24360852  T

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Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 295 - 379
Target Start/End: Original strand, 21565867 - 21565952
Alignment:
Q  295 ggcaaaggacgatggtttcccgggatgtcaacctaattagaatgtcggtgttgcctcctgatgtttgt-ctttctccctgcttagc 379  Q
    |||| ||||||  ||||| |||||||| ||||||| || ||||||| ||||| |||| |||||||||| ||| |||| ||||||||    
T  21565867 ggcataggacggaggttttccgggatgccaacctagttggaatgtcagtgtttcctcatgatgtttgtccttactccatgcttagc 21565952  T

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Target: chr6 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 3)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 336 - 379
Target Start/End: Original strand, 23402045 - 23402088
Alignment:
Q  336 atgtcggtgttgcctcctgatgtttgtctttctccctgcttagc 379  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  23402045 atgtcggtgtggcctcctgatgtttgtctttctccctgcttagc 23402088  T

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Target: chr6; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 347 - 379
Target Start/End: Complemental strand, 15562020 - 15561988
Alignment:
Q  347 gcctcctgatgtttgtctttctccctgcttagc 379  Q
    |||||||||||||||||||||||||||||||||    
T  15562020 gcctcctgatgtttgtctttctccctgcttagc 15561988  T

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Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 323 - 379
Target Start/End: Original strand, 15828246 - 15828302
Alignment:
Q  323 caacctaattagaatgtcggtgttgcctcctgatgtttgtctttctccctgcttagc 379  Q
    ||||||| || | |||||||||||| |||||||||| ||||| ||||||||||||||    
T  15828246 caacctagttgggatgtcggtgttgtctcctgatgtctgtctctctccctgcttagc 15828302  T

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Target: chr8 (Bit Score: 37; Significance: 0.00000000002; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 311 - 379
Target Start/End: Original strand, 19742067 - 19742135
Alignment:
Q  311 ttcccgggatgtcaacctaattagaatgtcggtgttgcctcctgatgtttgtctttctccctgcttagc 379  Q
    |||||||| || ||||||| || | |||||||||||| |||||||||| ||||| ||||||||||||||    
T  19742067 ttcccggggtgccaacctagttgggatgtcggtgttgtctcctgatgtctgtctctctccctgcttagc 19742135  T

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Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 281 - 379
Target Start/End: Complemental strand, 24527861 - 24527763
Alignment:
Q  281 tttagagtttgatgggcaaaggacgatggtttcccgggatgtcaacctaattagaatgtcggtgttgcctcctgatgtttgtctttctccctgcttagc 379  Q
    ||||||||||||  |||| |||| |  || |||||||| |||||| |||||| | |||||||||||| | |||||||| | ||| ||||||||||||||    
T  24527861 tttagagtttgacaggcataggatggaggcttcccggggtgtcaatctaattgggatgtcggtgttgtcccctgatgtctttctctctccctgcttagc 24527763  T

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Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 308 - 375
Target Start/End: Original strand, 16290878 - 16290946
Alignment:
Q  308 ggtttcccgggatgtcaacctaattagaatgtcggtgttgcctcctgatgtttgt-ctttctccctgct 375  Q
    ||||||||||| || ||||||| || | |||||||||||||||| |||||||||| |||||||| ||||    
T  16290878 ggtttcccggggtgccaacctagttgggatgtcggtgttgcctcttgatgtttgtcctttctccttgct 16290946  T

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Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 311 - 379
Target Start/End: Complemental strand, 24184804 - 24184735
Alignment:
Q  311 ttcccgggatgtcaacctaattagaatgtcggtgttgcctcctgatgtttgt-ctttctccctgcttagc 379  Q
    ||||||||||| ||||||| || | ||||||||||| |||| |||||||||| || |||||||| |||||    
T  24184804 ttcccgggatgccaacctagttgggatgtcggtgttccctcttgatgtttgtcctctctccctgtttagc 24184735  T

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Target: scaffold0356 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0356
Description:

Target: scaffold0356; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 280 - 379
Target Start/End: Original strand, 13719 - 13818
Alignment:
Q  280 atttagagtttgatgggcaaaggacgatggtttcccgggatgtcaacctaattagaatgtcggtgttgcctcctgatgtttgtctttctccctgcttagc 379  Q
    ||||||||||||||||||| ||||||   |||||||||| || ||||||| || | ||||||| ||||  ||||||||| ||||| |||||  |||||||    
T  13719 atttagagtttgatgggcataggacggaagtttcccggggtgccaacctagttgggatgtcggcgttgtttcctgatgtctgtctctctcctcgcttagc 13818  T

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Target: chr3 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 271 - 378
Target Start/End: Original strand, 2899914 - 2900021
Alignment:
Q  271 ttaataaatatttagagtttgatgggcaaaggacgatggtttcccgggatgtcaacctaattagaatgtcggtgttgcctcctgatgtttgtctttctcc 370  Q
    ||||||||  ||||||||| |||||||| ||||||  || || || || || ||||||| || | ||||| |||| |||||||||||| ||||||||||     
T  2899914 ttaataaaattttagagttagatgggcataggacggaggctttccagggtgccaacctagttgggatgtcagtgtagcctcctgatgtctgtctttctct 2900013  T
Q  371 ctgcttag 378  Q
    ||||||||    
T  2900014 ctgcttag 2900021  T

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Target: scaffold0114 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 281 - 379
Target Start/End: Original strand, 10831 - 10929
Alignment:
Q  281 tttagagtttgatgggcaaaggacgatggtttcccgggatgtcaacctaattagaatgtcggtgttgcctcctgatgtttgtctttctccctgcttagc 379  Q
    ||||||||||| |||||| ||||||  |  ||||||||||| |||| || ||   |||||||||| |||||||||||| | |||||||| |||||||||    
T  10831 tttagagtttggtgggcataggacggagacttcccgggatgccaacatagttgagatgtcggtgtggcctcctgatgtgtatctttctcactgcttagc 10929  T

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