View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5175_high_3 (Length: 429)

Name: NF5175_high_3
Description: NF5175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5175_high_3
NF5175_high_3
[»] chr1 (30 HSPs)
chr1 (6-291)||(42848379-42848664)
chr1 (326-415)||(42848686-42848775)
chr1 (325-386)||(5190727-5190788)
chr1 (326-386)||(7180561-7180621)
chr1 (326-390)||(12048071-12048135)
chr1 (325-386)||(21265719-21265780)
chr1 (325-382)||(48638599-48638656)
chr1 (326-390)||(13773227-13773291)
chr1 (326-393)||(6213477-6213544)
chr1 (326-385)||(12650331-12650390)
chr1 (330-393)||(17058760-17058822)
chr1 (326-384)||(28564292-28564350)
chr1 (327-381)||(35605571-35605625)
chr1 (326-395)||(1151813-1151882)
chr1 (325-386)||(1570138-1570199)
chr1 (325-386)||(6438010-6438071)
chr1 (325-386)||(12502200-12502261)
chr1 (325-386)||(15819547-15819608)
chr1 (325-386)||(32589435-32589496)
chr1 (325-386)||(32594314-32594375)
chr1 (325-386)||(40519489-40519550)
chr1 (325-386)||(42490356-42490417)
chr1 (325-386)||(46965803-46965864)
chr1 (326-386)||(8984453-8984513)
chr1 (326-386)||(12374461-12374521)
chr1 (326-386)||(16526124-16526184)
chr1 (326-386)||(19063280-19063340)
chr1 (326-386)||(39346926-39346986)
chr1 (326-386)||(40375262-40375322)
chr1 (327-395)||(50746765-50746833)
[»] chr6 (19 HSPs)
chr6 (326-386)||(29284329-29284389)
chr6 (326-384)||(216271-216329)
chr6 (325-386)||(8297690-8297751)
chr6 (325-386)||(28222925-28222986)
chr6 (325-385)||(2816954-2817014)
chr6 (325-393)||(9888471-9888539)
chr6 (325-384)||(33646900-33646959)
chr6 (325-383)||(15449509-15449567)
chr6 (325-385)||(978082-978140)
chr6 (325-382)||(7177362-7177419)
chr6 (329-386)||(10934662-10934719)
chr6 (325-386)||(13116570-13116631)
chr6 (325-386)||(19618672-19618733)
chr6 (325-386)||(19953774-19953835)
chr6 (326-395)||(27218938-27219007)
chr6 (325-386)||(28148679-28148740)
chr6 (327-383)||(9372149-9372205)
chr6 (326-386)||(10517262-10517322)
chr6 (326-386)||(32611501-32611561)
[»] chr4 (34 HSPs)
chr4 (326-415)||(27743662-27743752)
chr4 (325-386)||(30057285-30057346)
chr4 (326-390)||(54029612-54029676)
chr4 (326-390)||(56087901-56087965)
chr4 (325-386)||(2222602-2222663)
chr4 (325-386)||(3036001-3036062)
chr4 (325-386)||(3847744-3847805)
chr4 (325-386)||(8965157-8965218)
chr4 (325-386)||(36132292-36132353)
chr4 (325-390)||(40994049-40994114)
chr4 (326-386)||(626929-626989)
chr4 (326-386)||(42231575-42231635)
chr4 (326-385)||(46562707-46562766)
chr4 (325-395)||(53634197-53634267)
chr4 (329-386)||(1457968-1458025)
chr4 (325-386)||(10141046-10141107)
chr4 (325-386)||(18360556-18360617)
chr4 (352-393)||(22788647-22788688)
chr4 (325-382)||(25235743-25235800)
chr4 (325-386)||(34353842-34353903)
chr4 (325-386)||(36602312-36602373)
chr4 (326-383)||(39023241-39023298)
chr4 (325-386)||(43147330-43147391)
chr4 (325-386)||(43596958-43597019)
chr4 (325-386)||(46774976-46775037)
chr4 (325-386)||(48615418-48615479)
chr4 (325-386)||(48950847-48950908)
chr4 (325-386)||(49901545-49901606)
chr4 (326-386)||(5304957-5305017)
chr4 (326-386)||(10402504-10402564)
chr4 (326-386)||(12581975-12582035)
chr4 (343-383)||(37318100-37318140)
chr4 (326-382)||(40051689-40051745)
chr4 (327-390)||(56088593-56088657)
[»] chr8 (33 HSPs)
chr8 (325-386)||(43085169-43085230)
chr8 (325-393)||(10568141-10568209)
chr8 (326-384)||(42801596-42801654)
chr8 (325-386)||(11875949-11876010)
chr8 (325-386)||(11890956-11891017)
chr8 (325-390)||(17698581-17698646)
chr8 (325-390)||(27077043-27077108)
chr8 (325-386)||(34413125-34413186)
chr8 (326-386)||(94458-94518)
chr8 (326-382)||(8034359-8034415)
chr8 (326-386)||(17027828-17027888)
chr8 (326-386)||(17558264-17558324)
chr8 (326-390)||(29170824-29170888)
chr8 (327-390)||(32719556-32719619)
chr8 (344-390)||(33604143-33604189)
chr8 (325-395)||(43186907-43186977)
chr8 (325-395)||(44340291-44340361)
chr8 (325-386)||(2787027-2787088)
chr8 (325-386)||(5328513-5328574)
chr8 (326-395)||(7763886-7763955)
chr8 (325-386)||(10736820-10736881)
chr8 (326-395)||(11900390-11900459)
chr8 (325-386)||(21548443-21548504)
chr8 (325-386)||(28909528-28909589)
chr8 (325-386)||(29716923-29716984)
chr8 (329-386)||(37290985-37291042)
chr8 (325-386)||(37717426-37717487)
chr8 (325-386)||(38219514-38219575)
chr8 (326-386)||(11787214-11787274)
chr8 (326-386)||(17072510-17072570)
chr8 (326-386)||(17575701-17575761)
chr8 (326-386)||(29514689-29514749)
chr8 (326-390)||(32258066-32258130)
[»] chr3 (29 HSPs)
chr3 (326-382)||(51155039-51155095)
chr3 (325-382)||(32429814-32429871)
chr3 (325-386)||(39719998-39720059)
chr3 (325-386)||(41936353-41936414)
chr3 (325-386)||(53432683-53432744)
chr3 (325-393)||(2522982-2523050)
chr3 (326-386)||(34102558-34102618)
chr3 (326-393)||(2007030-2007097)
chr3 (352-395)||(25279032-25279075)
chr3 (326-384)||(10349465-10349523)
chr3 (329-383)||(11436570-11436624)
chr3 (352-390)||(31587006-31587044)
chr3 (325-386)||(4139063-4139124)
chr3 (325-382)||(4860228-4860285)
chr3 (325-382)||(4880236-4880293)
chr3 (325-386)||(15975354-15975415)
chr3 (325-386)||(18194401-18194462)
chr3 (325-386)||(30555173-30555234)
chr3 (325-386)||(33706673-33706734)
chr3 (325-386)||(37488406-37488467)
chr3 (325-386)||(37800557-37800618)
chr3 (325-386)||(40933777-40933838)
chr3 (325-386)||(50496760-50496821)
chr3 (326-383)||(50675689-50675746)
chr3 (325-386)||(53163657-53163718)
chr3 (325-385)||(7270019-7270079)
chr3 (325-385)||(10482799-10482859)
chr3 (326-390)||(11206049-11206113)
chr3 (326-386)||(42108129-42108189)
[»] chr2 (24 HSPs)
chr2 (326-390)||(18073802-18073866)
chr2 (344-390)||(1232251-1232297)
chr2 (325-386)||(5613017-5613078)
chr2 (325-386)||(33228879-33228940)
chr2 (325-386)||(36182705-36182766)
chr2 (326-386)||(13773463-13773523)
chr2 (326-384)||(1844882-1844940)
chr2 (325-383)||(38400380-38400438)
chr2 (325-386)||(1260247-1260308)
chr2 (325-386)||(1309072-1309133)
chr2 (325-386)||(6331624-6331685)
chr2 (325-390)||(18278363-18278428)
chr2 (325-390)||(18694844-18694909)
chr2 (325-386)||(20296481-20296542)
chr2 (325-386)||(40535395-40535456)
chr2 (325-386)||(41509579-41509640)
chr2 (326-390)||(5112798-5112862)
chr2 (326-390)||(17034794-17034858)
chr2 (326-390)||(17089302-17089366)
chr2 (326-382)||(27913417-27913473)
chr2 (326-386)||(28153089-28153149)
chr2 (326-386)||(28194695-28194755)
chr2 (352-384)||(33222127-33222159)
chr2 (326-386)||(44857181-44857241)
[»] scaffold0088 (1 HSPs)
scaffold0088 (325-386)||(10772-10833)
[»] scaffold0085 (1 HSPs)
scaffold0085 (325-386)||(27876-27937)
[»] scaffold0038 (1 HSPs)
scaffold0038 (325-386)||(23423-23484)
[»] chr7 (24 HSPs)
chr7 (325-386)||(3766874-3766935)
chr7 (325-386)||(9877213-9877274)
chr7 (325-386)||(10244835-10244896)
chr7 (325-386)||(23102504-23102565)
chr7 (325-386)||(32074341-32074402)
chr7 (326-386)||(26122093-26122153)
chr7 (327-386)||(1563687-1563746)
chr7 (325-383)||(43119378-43119436)
chr7 (325-386)||(3062837-3062898)
chr7 (336-393)||(27678967-27679024)
chr7 (325-386)||(29617468-29617529)
chr7 (325-386)||(35950191-35950252)
chr7 (325-390)||(42443748-42443813)
chr7 (325-386)||(44616665-44616726)
chr7 (325-390)||(47999839-47999904)
chr7 (325-385)||(12615815-12615875)
chr7 (326-386)||(28805363-28805423)
chr7 (326-386)||(31026282-31026342)
chr7 (326-386)||(32619413-32619473)
chr7 (326-386)||(34267498-34267558)
chr7 (326-386)||(40705897-40705957)
chr7 (326-390)||(43633037-43633101)
chr7 (325-385)||(45640038-45640098)
chr7 (326-386)||(45669720-45669780)
[»] scaffold0025 (1 HSPs)
scaffold0025 (326-390)||(65734-65798)
[»] chr5 (19 HSPs)
chr5 (325-385)||(6558865-6558925)
chr5 (326-390)||(36124458-36124522)
chr5 (326-393)||(13799371-13799438)
chr5 (325-383)||(21918118-21918176)
chr5 (325-386)||(4745822-4745883)
chr5 (325-386)||(8968812-8968873)
chr5 (325-386)||(11795556-11795617)
chr5 (325-386)||(12463819-12463880)
chr5 (326-379)||(24133026-24133079)
chr5 (325-386)||(25400313-25400374)
chr5 (326-383)||(29691423-29691480)
chr5 (326-395)||(32706376-32706445)
chr5 (326-386)||(9835096-9835156)
chr5 (325-393)||(17064805-17064872)
chr5 (326-386)||(21749325-21749385)
chr5 (326-386)||(29154905-29154965)
chr5 (326-390)||(34824409-34824473)
chr5 (325-385)||(41156392-41156452)
chr5 (326-390)||(43580937-43581001)
[»] scaffold0128 (1 HSPs)
scaffold0128 (325-386)||(17683-17744)
[»] scaffold0117 (1 HSPs)
scaffold0117 (325-386)||(18425-18486)
[»] scaffold0690 (1 HSPs)
scaffold0690 (326-386)||(3729-3789)
[»] scaffold0028 (1 HSPs)
scaffold0028 (325-393)||(112164-112232)


Alignment Details
Target: chr1 (Bit Score: 270; Significance: 1e-151; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 6 - 291
Target Start/End: Original strand, 42848379 - 42848664
Alignment:
Q  6 aggagcagagaaccacggcagattatgtacaaagtacaaaccgaaaaaattaggcaaagaaccacggcagattatgtacatagtacaacctgaaaaaatt 105  Q
    ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42848379 aggagcaaagaaccacggcagattatgtacgaagtacaaaccgaaaaaattaggcaaagaaccacggcagattatgtacatagtacaacctgaaaaaatt 42848478  T
Q  106 agactaaagttaaatatgtaccatcttatcattgttgcttatgatttgagcaaatgcaaatcaaagatattgtacatcctaatttccgatgcctgagtag 205  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  42848479 agactaaagttaaatatgtaccatcttatcattgttgcttatgatttgagcaaatgcaaatcaaagatattgtaaatcctaatttccgatgcccgagtag 42848578  T
Q  206 tttagtacttatgtaccatcgaattatgtttacacacgaaaaaagattaagcaaaaatttagatgaagaatttaattaatatacac 291  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42848579 tttagtacttatgtaccatcgaattatgtttacacacgaaaaaagattaagcaaaaatttagatgaagaatttaattaatatacac 42848664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 326 - 415
Target Start/End: Original strand, 42848686 - 42848775
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattcaaatctgcatataatatgcaatatc 415  Q
    ||||||||| |||||  |||||||| ||||| |||||||  ||||||||||||||||||||  |||||||||||||||||||||||||||    
T  42848686 gtcaagtagtctagtggttagaactcacacaatttaattgcggagaagtggggtgtccggggatcaaatctgcatataatatgcaatatc 42848775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 5190727 - 5190788
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   ||||||||||||| | ||||| |||||||||||||||||||||    
T  5190727 ggtcaagtagcctagtggctagaacttacacaatataattgtggagaagtggggtgtccggg 5190788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 7180561 - 7180621
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||| | |||| || ||||| ||||||| |||||||||||||||||||||    
T  7180561 gtcaagtagcctagtgactagagctcacacaatttaattgtggagaagtggggtgtccggg 7180621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 326 - 390
Target Start/End: Original strand, 12048071 - 12048135
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattc 390  Q
    |||||||||||||||   |||| || ||||| ||||||| |||||||||||||||||||||||||    
T  12048071 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccgggattc 12048135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 21265780 - 21265719
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| |||||||||||||||||||||    
T  21265780 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggg 21265719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 382
Target Start/End: Complemental strand, 48638656 - 48638599
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtc 382  Q
    ||||||||||||||||   |||| || ||||||||||||| |||||||||||||||||    
T  48638656 ggtcaagtagcctagtggctagagctcacacagtttaattgtggagaagtggggtgtc 48638599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 390
Target Start/End: Complemental strand, 13773291 - 13773227
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattc 390  Q
    |||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||||||    
T  13773291 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccgggattc 13773227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 393
Target Start/End: Complemental strand, 6213544 - 6213477
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattcaaa 393  Q
    ||||||||| |||||   ||||||| ||||| ||||||| || ||||||||||| |||||||||||||    
T  6213544 gtcaagtagtctagtggctagaactcacacaatttaattgtgaagaagtggggtatccgggattcaaa 6213477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 385
Target Start/End: Original strand, 12650331 - 12650390
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgg 385  Q
    |||||||||||||||   |||| || ||||| ||||||| ||||||||||||||||||||    
T  12650331 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccgg 12650390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 393
Target Start/End: Complemental strand, 17058822 - 17058760
Alignment:
Q  330 agtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattcaaa 393  Q
    |||||||||||  ||||| || ||||| || |||| ||||||||||||||||||||||||||||    
T  17058822 agtagcctagtggttagagctcacacaatt-aattgtggagaagtggggtgtccgggattcaaa 17058760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 384
Target Start/End: Original strand, 28564292 - 28564350
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccg 384  Q
    |||||||||||||||   |||| || ||||| ||||||| |||||||||||||||||||    
T  28564292 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccg 28564350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 327 - 381
Target Start/End: Original strand, 35605571 - 35605625
Alignment:
Q  327 tcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgt 381  Q
    |||||||||||||||  |||| || ||||| ||||||| ||||||||||||||||    
T  35605571 tcaagtagcctagtagctagagctcacacaatttaattgtggagaagtggggtgt 35605625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 395
Target Start/End: Complemental strand, 1151882 - 1151813
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattcaaatc 395  Q
    ||||||||||||||| | |||| || ||||| ||||||| || |||||||| ||||||||| ||| ||||    
T  1151882 gtcaagtagcctagtgactagagctcacacaatttaattgtgaagaagtggagtgtccggggttcgaatc 1151813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 1570138 - 1570199
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  1570138 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 1570199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 6438010 - 6438071
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  6438010 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 6438071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 12502200 - 12502261
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  12502200 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 12502261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 15819547 - 15819608
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  15819547 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 15819608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 32589435 - 32589496
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||  ||||| || ||||| ||||||| ||||||||||| ||| |||||    
T  32589435 ggtcaagtagcctagtggttagagctcacacaatttaattgtggagaagtggagtgaccggg 32589496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 32594375 - 32594314
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  32594375 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 32594314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 40519489 - 40519550
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  40519489 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 40519550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 42490356 - 42490417
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||| |||||||||||  |||||  | ||||| ||||||| |||||||||||||||||||||    
T  42490356 ggtcgagtagcctagtggttagagttcacacaatttaattgtggagaagtggggtgtccggg 42490417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 46965864 - 46965803
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  46965864 ggtcaagtagcctagtggctagagctcacacaatttaattatggagaagtggagtgtccggg 46965803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 8984453 - 8984513
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  8984453 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 8984513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 12374461 - 12374521
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||||| |||| | |||| || ||||| ||||||| || ||||||||||||||||||    
T  12374461 gtcaagtagcatagtgactagagctcacacaatttaattgtgaagaagtggggtgtccggg 12374521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 16526124 - 16526184
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||||||||||  ||||| || ||||| ||||||| ||||||||||| |||| ||||    
T  16526124 gtcaagtagcctagtggttagagctcacacaatttaattgtggagaagtggagtgtacggg 16526184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 19063280 - 19063340
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||||  ||||| ||||| || ||||| || |||| |||||||||||||||||||||    
T  19063280 gtcaagtagtttagtagttagagctcacacaattaaattgtggagaagtggggtgtccggg 19063340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 39346926 - 39346986
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||| |||||||||   ||||||| ||||| ||||||| ||||||||||| |||||||||    
T  39346926 gtcaaatagcctagtggctagaactcacacaatttaattgtggagaagtggagtgtccggg 39346986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 40375262 - 40375322
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||||||||||  ||||| || ||||| ||||||| ||||||||| | |||||||||    
T  40375262 gtcaagtagcctagtggttagagctcacacaatttaattgtggagaagtagagtgtccggg 40375322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 395
Target Start/End: Complemental strand, 50746833 - 50746765
Alignment:
Q  327 tcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattcaaatc 395  Q
    |||||||| |||||  ||||| ||  |||| ||||||| ||||||||||||||||||||| ||| ||||    
T  50746833 tcaagtagtctagtggttagagctcgcacaatttaattgtggagaagtggggtgtccggggttcgaatc 50746765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 29284389 - 29284329
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||||||||||   ||||||||||||| ||||||| |||||||||||||||||||||    
T  29284389 gtcaagtagcctagtggctagaacttacacaatttaattgtggagaagtggggtgtccggg 29284329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 384
Target Start/End: Complemental strand, 216329 - 216271
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccg 384  Q
    |||||||||||||||  ||||| || ||||| ||||||| |||||||||||||||||||    
T  216329 gtcaagtagcctagtggttagagctcacacaatttaattgtggagaagtggggtgtccg 216271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 8297751 - 8297690
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||| |||||||  ||||| || ||||| ||||||| |||||||||||||||||||||    
T  8297751 ggtcaagtggcctagtggttagagctcacacaatttaattgtggagaagtggggtgtccggg 8297690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 28222986 - 28222925
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||  ||||| || ||||| ||||||| ||||||||||| |||||||||    
T  28222986 ggtcaagtagcctagtggttagagctcacacaatttaattatggagaagtggagtgtccggg 28222925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 385
Target Start/End: Complemental strand, 2817014 - 2816954
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgg 385  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||||||||||||    
T  2817014 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccgg 2816954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 393
Target Start/End: Original strand, 9888471 - 9888539
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattcaaa 393  Q
    ||||||||||||||||  ||||| || ||| | ||||||| ||||||||||| ||||||||| ||||||    
T  9888471 ggtcaagtagcctagtggttagagctcacataatttaattgtggagaagtggagtgtccggggttcaaa 9888539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 325 - 384
Target Start/End: Complemental strand, 33646959 - 33646900
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccg 384  Q
    ||||||||||||||||   |||| || ||||| ||||||| |||||||||||||||||||    
T  33646959 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccg 33646900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 383
Target Start/End: Original strand, 15449509 - 15449567
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtcc 383  Q
    ||||||||||||||||| ||||| || ||||| ||| ||| ||||||||||| ||||||    
T  15449509 ggtcaagtagcctagtagttagagctcacacaatttcattgtggagaagtggagtgtcc 15449567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 385
Target Start/End: Original strand, 978082 - 978140
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgg 385  Q
    ||||||||||| ||||  ||||||||  |||| ||||||| ||||||||||||||||||||    
T  978082 ggtcaagtagcttagtggttagaact--cacaatttaattgtggagaagtggggtgtccgg 978140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 382
Target Start/End: Complemental strand, 7177419 - 7177362
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtc 382  Q
    ||||||||||||||||   |||| || |||| |||||||| |||||||||||||||||    
T  7177419 ggtcaagtagcctagtggctagagctcacactgtttaattgtggagaagtggggtgtc 7177362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 386
Target Start/End: Complemental strand, 10934719 - 10934662
Alignment:
Q  329 aagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||   ||||||| ||||| ||||||| ||||||||||| |||||||||    
T  10934719 aagtagcctagtggctagaactcacacaatttaattgtggagaagtggagtgtccggg 10934662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 13116570 - 13116631
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| |||||||| ||||||||||||    
T  13116570 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagaggggtgtccggg 13116631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 19618672 - 19618733
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||  || || || | ||| ||||||| |||||||||||||||||||||    
T  19618672 ggtcaagtagcctagtggttcgagctcatacaatttaattgtggagaagtggggtgtccggg 19618733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 19953774 - 19953835
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  19953774 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 19953835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 395
Target Start/End: Complemental strand, 27219007 - 27218938
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattcaaatc 395  Q
    |||||||||||||||   |||| || ||||| ||||||| ||||||||||| ||||||||| ||| ||||    
T  27219007 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaatc 27218938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 28148679 - 28148740
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  28148679 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 28148740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 383
Target Start/End: Original strand, 9372149 - 9372205
Alignment:
Q  327 tcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtcc 383  Q
    |||||||||||||||  ||||||| ||||| || |||| ||||||||||| ||||||    
T  9372149 tcaagtagcctagtagctagaactcacacaattaaattgtggagaagtggagtgtcc 9372205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 10517322 - 10517262
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  10517322 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 10517262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 32611501 - 32611561
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  32611501 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 32611561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 326 - 415
Target Start/End: Original strand, 27743662 - 27743752
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattc-aaatctgcatataatatgcaatatc 415  Q
    ||||||||| |||||| |||||| | ||||| ||||||| ||||||||| ||||||||||| ||| |   |||||||||||||||||||||    
T  27743662 gtcaagtagtctagtagttagaaatcacacaatttaattgtggagaagtagggtgtccggggttcgacccctgcatataatatgcaatatc 27743752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 30057346 - 30057285
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||  ||||| || ||||| ||||||| |||||||||||||||||||||    
T  30057346 ggtcaagtagcctagtggttagagctcacacaatttaattgtggagaagtggggtgtccggg 30057285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 326 - 390
Target Start/End: Complemental strand, 54029676 - 54029612
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattc 390  Q
    ||||||||||||||| | |||| || ||||| ||||||| ||||||||||| |||||||||||||    
T  54029676 gtcaagtagcctagtgactagagctcacacaatttaattgtggagaagtggagtgtccgggattc 54029612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 326 - 390
Target Start/End: Original strand, 56087901 - 56087965
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattc 390  Q
    ||||||||| |||||   ||||||| ||||| ||||||| |||||||||||||||||||||||||    
T  56087901 gtcaagtagtctagtggctagaactcacacaatttaattgtggagaagtggggtgtccgggattc 56087965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 2222663 - 2222602
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| |||||||||||||||||||||    
T  2222663 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggg 2222602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 3036001 - 3036062
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| |||||||||||||||||||||    
T  3036001 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggg 3036062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 3847805 - 3847744
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   ||||||| ||||| ||||||| ||||||||||| |||||||||    
T  3847805 ggtcaagtagcctagtggctagaactcacacaatttaattgtggagaagtggagtgtccggg 3847744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 8965218 - 8965157
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||  ||||| || ||||| ||||||| | |||||||||||||||||||    
T  8965218 ggtcaagtagcctagtggttagagctcacacaatttaattgtagagaagtggggtgtccggg 8965157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 36132353 - 36132292
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||  ||||| || ||||| ||||||| ||||||||||| |||||||||    
T  36132353 ggtcaagtagcctagtggttagacctcacacaatttaattgtggagaagtggagtgtccggg 36132292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 390
Target Start/End: Original strand, 40994049 - 40994114
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattc 390  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||||||    
T  40994049 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccgggattc 40994114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 626929 - 626989
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||||||||||  ||||| || ||||| ||||||| ||||||||||| |||||||||    
T  626929 gtcaagtagcctagtggttagagctcacacaatttaattgtggagaagtggagtgtccggg 626989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 42231635 - 42231575
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||| | |||| || ||||| ||||||| ||||||||||| |||||||||    
T  42231635 gtcaagtagcctagtgactagagctcacacaatttaattgtggagaagtggagtgtccggg 42231575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 385
Target Start/End: Complemental strand, 46562766 - 46562707
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgg 385  Q
    ||||||||| ||||| |||||| |||||| | ||||| | ||||||||||||||||||||    
T  46562766 gtcaagtagtctagtgattagagcttacatattttaaatatggagaagtggggtgtccgg 46562707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 395
Target Start/End: Original strand, 53634197 - 53634267
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattcaaatc 395  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| ||||||||| ||| ||||    
T  53634197 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaatc 53634267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 386
Target Start/End: Original strand, 1457968 - 1458025
Alignment:
Q  329 aagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||  ||||| || ||||| ||||||| ||||||||||| |||||||||    
T  1457968 aagtagcctagtggttagagctcacacaatttaattgtggagaagtggagtgtccggg 1458025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 10141107 - 10141046
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  10141107 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 10141046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 18360617 - 18360556
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||||| | |||  |||||||| ||||| ||||||| ||||||||||| |||||||||    
T  18360617 ggtcaagtagtccagtggttagaactcacacaatttaattgtggagaagtggagtgtccggg 18360556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 352 - 393
Target Start/End: Original strand, 22788647 - 22788688
Alignment:
Q  352 acacagtttaattttggagaagtggggtgtccgggattcaaa 393  Q
    ||||| || |||| ||||||||||||||||||||||||||||    
T  22788647 acacaattaaattgtggagaagtggggtgtccgggattcaaa 22788688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 382
Target Start/End: Original strand, 25235743 - 25235800
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtc 382  Q
    |||||||||||||||||  ||||||| ||||| || |||| ||||||||||| |||||    
T  25235743 ggtcaagtagcctagtagctagaactcacacaattaaattgtggagaagtggagtgtc 25235800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 34353903 - 34353842
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||  ||| | || ||| | ||||||| |||||||||||||||||||||    
T  34353903 ggtcaagtagcctagtggttacagctcacataatttaattgtggagaagtggggtgtccggg 34353842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 36602312 - 36602373
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||||| | |||  |||||||| ||||| ||||||| ||||||||||| |||||||||    
T  36602312 ggtcaagtagtccagtggttagaactcacacaatttaattgtggagaagtggagtgtccggg 36602373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 383
Target Start/End: Complemental strand, 39023298 - 39023241
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtcc 383  Q
    |||||||||||||||   ||||||||||||| || |||| ||||||||||| ||||||    
T  39023298 gtcaagtagcctagtggctagaacttacacaattaaattgtggagaagtggagtgtcc 39023241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 43147330 - 43147391
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  43147330 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 43147391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 43597019 - 43596958
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  43597019 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 43596958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 46774976 - 46775037
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  46774976 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 46775037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 48615418 - 48615479
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||||||||||| | |||| || ||||| ||||||| ||||||||||| || ||||||    
T  48615418 ggtcaagtagcctagtgactagagctcacacaatttaattgtggagaagtggagtatccggg 48615479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 48950908 - 48950847
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  48950908 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 48950847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 49901606 - 49901545
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| |||||||| ||||||||||||    
T  49901606 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagcggggtgtccggg 49901545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 5304957 - 5305017
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  5304957 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 5305017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 10402564 - 10402504
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||||||||||   |||| || ||||| ||||||| |||||||||| ||||||||||    
T  10402564 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtgaggtgtccggg 10402504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 12581975 - 12582035
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  12581975 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 12582035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 343 - 383
Target Start/End: Original strand, 37318100 - 37318140
Alignment:
Q  343 ttagaacttacacagtttaattttggagaagtggggtgtcc 383  Q
    |||||||| ||||| ||||||| ||||||||||||||||||    
T  37318100 ttagaactcacacaatttaattgtggagaagtggggtgtcc 37318140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 382
Target Start/End: Complemental strand, 40051745 - 40051689
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtc 382  Q
    |||||||||||||||   |||| || ||||| ||||||| |||||||||||||||||    
T  40051745 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtc 40051689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 327 - 390
Target Start/End: Complemental strand, 56088657 - 56088593
Alignment:
Q  327 tcaagtagcctagtaattagaacttacacagtttaattttggagaagtgggg-tgtccgggattc 390  Q
    |||||||| ||||||  ||||||| ||||| ||||||| ||||||| ||||| ||||||||||||    
T  56088657 tcaagtagtctagtagctagaactcacacaatttaattgtggagaaatgggggtgtccgggattc 56088593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000003; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 43085169 - 43085230
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||  ||||| |||||||| ||||||| ||||||||||| |||||||||    
T  43085169 ggtcaagtagcctagtggttagagcttacacaatttaattgtggagaagtggagtgtccggg 43085230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 325 - 393
Target Start/End: Complemental strand, 10568209 - 10568141
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattcaaa 393  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||||||||||||| ||||||    
T  10568209 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggggttcaaa 10568141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 384
Target Start/End: Original strand, 42801596 - 42801654
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccg 384  Q
    ||||||||| |||||  |||||||| ||||| ||||||| |||||||||||||||||||    
T  42801596 gtcaagtagtctagtggttagaactcacacaatttaattatggagaagtggggtgtccg 42801654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 11876010 - 11875949
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||  ||||| || ||||| ||||||| ||||||||||| |||||||||    
T  11876010 ggtcaagtagcctagtggttagagctcacacaatttaattgtggagaagtggagtgtccggg 11875949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 11891017 - 11890956
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||  ||||| || ||||| ||||||| ||||||||||| |||||||||    
T  11891017 ggtcaagtagcctagtggttagagctcacacaatttaattgtggagaagtggagtgtccggg 11890956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 390
Target Start/End: Complemental strand, 17698646 - 17698581
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattc 390  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||||||    
T  17698646 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccgggattc 17698581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 390
Target Start/End: Original strand, 27077043 - 27077108
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattc 390  Q
    |||||||||||||| |  || || || ||||| ||||||| |||||||||||||||||||||||||    
T  27077043 ggtcaagtagcctaatggttcgagctcacacaatttaattgtggagaagtggggtgtccgggattc 27077108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 34413186 - 34413125
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||  ||||| || ||||| ||||||| ||||||||||| |||||||||    
T  34413186 ggtcaagtagcctagtggttagagctcacacaatttaattgtggagaagtggagtgtccggg 34413125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 94458 - 94518
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||||||||||  ||||| || ||||| ||||||| ||||||||||| |||||||||    
T  94458 gtcaagtagcctagtggttagagctcacacaatttaattgtggagaagtggagtgtccggg 94518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 382
Target Start/End: Original strand, 8034359 - 8034415
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtc 382  Q
    |||||||||||||||   ||||||| ||||| ||||||| |||||||||||||||||    
T  8034359 gtcaagtagcctagtggctagaactcacacaatttaattgtggagaagtggggtgtc 8034415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 17027828 - 17027888
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||||||||||   |||| || ||||| ||||||| |||||||||||||||||||||    
T  17027828 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggg 17027888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 17558264 - 17558324
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||||||||||   |||| || ||||| ||||||| |||||||||||||||||||||    
T  17558264 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggg 17558324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 390
Target Start/End: Complemental strand, 29170888 - 29170824
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattc 390  Q
    ||||||||| |||||   ||||||| ||||| ||||||| |||||||||||||| ||||||||||    
T  29170888 gtcaagtagtctagtggctagaactcacacaatttaattgtggagaagtggggtatccgggattc 29170824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 390
Target Start/End: Original strand, 32719556 - 32719619
Alignment:
Q  327 tcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattc 390  Q
    ||||||||||||||  ||||| || ||||| ||||||| |||| |||||| |||||||||||||    
T  32719556 tcaagtagcctagtggttagagctcacacaatttaattgtggaaaagtggagtgtccgggattc 32719619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 344 - 390
Target Start/End: Original strand, 33604143 - 33604189
Alignment:
Q  344 tagaacttacacagtttaattttggagaagtggggtgtccgggattc 390  Q
    ||||||| ||||| ||||||| ||||||||||| |||||||||||||    
T  33604143 tagaactcacacaatttaattgtggagaagtggagtgtccgggattc 33604189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 395
Target Start/End: Complemental strand, 43186977 - 43186907
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattcaaatc 395  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| ||||||||| ||| ||||    
T  43186977 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaatc 43186907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 395
Target Start/End: Original strand, 44340291 - 44340361
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattcaaatc 395  Q
    |||||||||||||||| | || | || ||||| ||||||| ||||||||||| ||||||||| ||| ||||    
T  44340291 ggtcaagtagcctagtgactatagctcacacaatttaattgtggagaagtggagtgtccggggttcgaatc 44340361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 2787027 - 2787088
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  2787027 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 2787088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 5328513 - 5328574
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| |||||||||| ||||||||||    
T  5328513 ggtcaagtagcctagtggctagagctcacacattttaattgtggagaagtgaggtgtccggg 5328574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 395
Target Start/End: Original strand, 7763886 - 7763955
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattcaaatc 395  Q
    |||||||||| ||||   |||| || ||||| ||||||| ||||||||||||||||||||  ||||||||    
T  7763886 gtcaagtagcttagtggctagagctcacacaatttaattgtggagaagtggggtgtccggagttcaaatc 7763955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 10736820 - 10736881
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  10736820 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 10736881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 395
Target Start/End: Original strand, 11900390 - 11900459
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattcaaatc 395  Q
    ||||||||||||||| | |||||   ||||| ||||||| |||||| ||||| |||||||||||| ||||    
T  11900390 gtcaagtagcctagtgactagaatgcacacaatttaattgtggagaggtgggatgtccgggattcgaatc 11900459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 21548443 - 21548504
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| |||||||||||||||| ||||    
T  21548443 ggtcaagtagcctagtggctagagctcacacattttaattgtggagaagtggggtgttcggg 21548504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 28909589 - 28909528
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  28909589 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 28909528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 29716984 - 29716923
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||| ||  ||||| || ||||| ||||||| ||||||||||| |||||||||    
T  29716984 ggtcaagtagcctcgtggttagagctcacacaatttaattgtggagaagtggagtgtccggg 29716923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 329 - 386
Target Start/End: Complemental strand, 37291042 - 37290985
Alignment:
Q  329 aagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||   |||| || ||||| ||||||| |||||||||||||||||||||    
T  37291042 aagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggg 37290985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 37717487 - 37717426
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  37717487 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 37717426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 38219514 - 38219575
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  38219514 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 38219575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 11787274 - 11787214
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||||||||||  ||||| || ||| | ||||||| ||||||||||| |||||||||    
T  11787274 gtcaagtagcctagtggttagagctcacataatttaattgtggagaagtggagtgtccggg 11787214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 17072510 - 17072570
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||||||||||   |||| || ||||| ||||||| |||||||||||||||| ||||    
T  17072510 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgttcggg 17072570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 17575761 - 17575701
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||||||||||   |||| || ||||| ||||||| |||||||||||||||| ||||    
T  17575761 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgttcggg 17575701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 29514749 - 29514689
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  29514749 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 29514689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 390
Target Start/End: Complemental strand, 32258130 - 32258066
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattc 390  Q
    |||||||||  ||||  ||||| || ||||| ||||||| |||||||||||||||||| ||||||    
T  32258130 gtcaagtagtttagtggttagagctcacacaatttaattgtggagaagtggggtgtccaggattc 32258066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000001; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 326 - 382
Target Start/End: Original strand, 51155039 - 51155095
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtc 382  Q
    |||||||||||||||| ||||| || ||||| ||||||| |||||||||||||||||    
T  51155039 gtcaagtagcctagtagttagagctcacacaatttaattgtggagaagtggggtgtc 51155095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 382
Target Start/End: Complemental strand, 32429871 - 32429814
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtc 382  Q
    ||||||||||||||||  ||||| || ||||| ||||||| |||||||||||||||||    
T  32429871 ggtcaagtagcctagtggttagagctcacacaatttaattgtggagaagtggggtgtc 32429814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 39720059 - 39719998
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| |||||||||||||||||||||    
T  39720059 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggg 39719998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 41936353 - 41936414
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| |||||||||||||||||||||    
T  41936353 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggg 41936414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 53432683 - 53432744
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| |||||||||||||||||||||    
T  53432683 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggg 53432744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 393
Target Start/End: Complemental strand, 2523050 - 2522982
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattcaaa 393  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| ||||||||| ||||||    
T  2523050 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggggttcaaa 2522982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 34102558 - 34102618
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||| ||||||   |||| || ||||||||||||| |||||||||||||||||||||    
T  34102558 gtcaagtaacctagtggctagagctcacacagtttaattgtggagaagtggggtgtccggg 34102618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 393
Target Start/End: Original strand, 2007030 - 2007097
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattcaaa 393  Q
    |||||||||||||||   |||| || ||||| ||||||| ||||||||||| ||||||||| ||||||    
T  2007030 gtcaagtagcctagtggatagagctcacacaatttaattgtggagaagtggagtgtccggggttcaaa 2007097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 352 - 395
Target Start/End: Original strand, 25279032 - 25279075
Alignment:
Q  352 acacagtttaattttggagaagtggggtgtccgggattcaaatc 395  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||||    
T  25279032 acacaatttaattgtggagaagtggggtgtccggggttcaaatc 25279075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 384
Target Start/End: Complemental strand, 10349523 - 10349465
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccg 384  Q
    |||||||||||||||  ||||| || ||||| ||||||| ||||||||||| |||||||    
T  10349523 gtcaagtagcctagtggttagagctcacacaatttaattgtggagaagtggagtgtccg 10349465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 329 - 383
Target Start/End: Complemental strand, 11436624 - 11436570
Alignment:
Q  329 aagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtcc 383  Q
    ||||| ||||||  |||||||| ||||| ||||||| ||||||||||||||||||    
T  11436624 aagtaacctagtggttagaactcacacaatttaattgtggagaagtggggtgtcc 11436570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 352 - 390
Target Start/End: Complemental strand, 31587044 - 31587006
Alignment:
Q  352 acacagtttaattttggagaagtggggtgtccgggattc 390  Q
    ||||| ||||||| |||||||||||||||||||||||||    
T  31587044 acacaatttaattgtggagaagtggggtgtccgggattc 31587006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 4139124 - 4139063
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  4139124 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 4139063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 382
Target Start/End: Complemental strand, 4860285 - 4860228
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtc 382  Q
    |||||||||| |||||  ||||| || ||||| ||||||| |||||||||||||||||    
T  4860285 ggtcaagtagtctagtggttagagctcacacaatttaattgtggagaagtggggtgtc 4860228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 382
Target Start/End: Complemental strand, 4880293 - 4880236
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtc 382  Q
    |||||||||| |||||  ||||| || ||||| ||||||| |||||||||||||||||    
T  4880293 ggtcaagtagtctagtggttagagctcacacaatttaattgtggagaagtggggtgtc 4880236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 15975354 - 15975415
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||  ||||| || ||||| ||||||| ||||||||||| |||| ||||    
T  15975354 ggtcaagtagcctagtggttagagctcacacaatttaattatggagaagtggagtgttcggg 15975415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 18194462 - 18194401
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  18194462 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 18194401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 30555173 - 30555234
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  30555173 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 30555234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 33706673 - 33706734
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  33706673 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 33706734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 37488406 - 37488467
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  37488406 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 37488467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 37800557 - 37800618
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  37800557 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 37800618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 40933777 - 40933838
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  40933777 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 40933838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 50496760 - 50496821
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  50496760 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 50496821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 383
Target Start/End: Original strand, 50675689 - 50675746
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtcc 383  Q
    |||||||||||||||   |||| || ||||| ||||||| ||||||||||||||||||    
T  50675689 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtcc 50675746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 53163718 - 53163657
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| |||||||  ||||||||||||||||||||    
T  53163718 ggtcaagtagcctagtggctagagctcacacaatttaattgcggagaagtggggtgtccggg 53163657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 385
Target Start/End: Complemental strand, 7270079 - 7270019
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgg 385  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| ||||||||    
T  7270079 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccgg 7270019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 385
Target Start/End: Original strand, 10482799 - 10482859
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgg 385  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| ||||||||    
T  10482799 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccgg 10482859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 390
Target Start/End: Complemental strand, 11206113 - 11206049
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattc 390  Q
    |||||||||||||||   |||| || ||||| ||||| | |||||||||||||| ||||||||||    
T  11206113 gtcaagtagcctagtggctagagctcacacaatttaactgtggagaagtggggtatccgggattc 11206049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 42108129 - 42108189
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||| |||||||||  | |||||| ||||| ||||||| ||||||||||||| |||||||    
T  42108129 gtcaaatagcctagtggtaagaactcacacaatttaattgtggagaagtggggcgtccggg 42108189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 326 - 390
Target Start/End: Complemental strand, 18073866 - 18073802
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattc 390  Q
    ||||| ||||||||| | ||||||| ||||| ||||||| ||||||||||| |||||||||||||    
T  18073866 gtcaaatagcctagtgactagaactcacacaatttaattgtggagaagtggagtgtccgggattc 18073802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 344 - 390
Target Start/End: Complemental strand, 1232297 - 1232251
Alignment:
Q  344 tagaacttacacagtttaattttggagaagtggggtgtccgggattc 390  Q
    ||||||||||||| ||||||| ||||||||||| |||||||||||||    
T  1232297 tagaacttacacaatttaattatggagaagtggagtgtccgggattc 1232251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 5613078 - 5613017
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||  ||||| || ||||| || |||| |||||||||||||||||||||    
T  5613078 ggtcaagtagcctagtggttagagctcacacaattaaattgtggagaagtggggtgtccggg 5613017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 33228879 - 33228940
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| |||||||||||||||||||||    
T  33228879 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggg 33228940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 36182766 - 36182705
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||  ||||| || ||||| ||||||| ||||||||||| |||||||||    
T  36182766 ggtcaagtagcctagtggttagagctcacacaatttaattgtggagaagtggagtgtccggg 36182705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 13773523 - 13773463
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||||||||||  ||||| || ||||| ||||||| ||||||||||| |||||||||    
T  13773523 gtcaagtagcctagtggttagagctcacacaatttaattgtggagaagtggagtgtccggg 13773463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 384
Target Start/End: Complemental strand, 1844940 - 1844882
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccg 384  Q
    |||||||||||||||   |||| || ||||| ||||||| |||||||||||||||||||    
T  1844940 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccg 1844882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 383
Target Start/End: Complemental strand, 38400438 - 38400380
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtcc 383  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||||||||||    
T  38400438 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtcc 38400380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 1260308 - 1260247
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| |||||||| ||||||||||||    
T  1260308 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagcggggtgtccggg 1260247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 1309072 - 1309133
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  1309072 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 1309133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 6331685 - 6331624
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  6331685 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 6331624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 390
Target Start/End: Original strand, 18278363 - 18278428
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattc 390  Q
    |||||| |||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||||||    
T  18278363 ggtcaaatagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccgggattc 18278428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 390
Target Start/End: Complemental strand, 18694909 - 18694844
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattc 390  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| ||||| |||||||    
T  18694909 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtctgggattc 18694844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 20296542 - 20296481
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  20296542 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 20296481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 40535395 - 40535456
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  40535395 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 40535456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 41509640 - 41509579
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  41509640 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 41509579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 390
Target Start/End: Original strand, 5112798 - 5112862
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattc 390  Q
    |||||||||||||||  ||||| || ||||| ||||||| |||||||||||| | ||| ||||||    
T  5112798 gtcaagtagcctagtggttagagctcacacaatttaattgtggagaagtgggatatccaggattc 5112862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 390
Target Start/End: Complemental strand, 17034858 - 17034794
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattc 390  Q
    |||||||||||||||   |||| || ||| | ||||||| ||||||||||| |||||||||||||    
T  17034858 gtcaagtagcctagtggctagagctcacataatttaattgtggagaagtggagtgtccgggattc 17034794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 390
Target Start/End: Complemental strand, 17089366 - 17089302
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattc 390  Q
    |||||||||||||||   |||| || ||| | ||||||| ||||||||||| |||||||||||||    
T  17089366 gtcaagtagcctagtggctagagctcacataatttaattgtggagaagtggagtgtccgggattc 17089302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 382
Target Start/End: Original strand, 27913417 - 27913473
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtc 382  Q
    |||||||||||||||  ||||| |||||||| || |||| ||||||||||| |||||    
T  27913417 gtcaagtagcctagtggttagagcttacacaattaaattgtggagaagtggagtgtc 27913473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 28153089 - 28153149
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||| |||||   |||| || ||||| ||||||| |||||||||||||||||||||    
T  28153089 gtcaagtagtctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggg 28153149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 28194755 - 28194695
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||| |||||||||   |||| || ||||| ||||||| |||||||||||||||||||||    
T  28194755 gtcaaatagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggg 28194695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 384
Target Start/End: Original strand, 33222127 - 33222159
Alignment:
Q  352 acacagtttaattttggagaagtggggtgtccg 384  Q
    ||||||||||||| |||||||||||||||||||    
T  33222127 acacagtttaattgtggagaagtggggtgtccg 33222159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 44857181 - 44857241
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||||||||||   |||| |||||||| || |||| ||||||||||| |||||||||    
T  44857181 gtcaagtagcctagtggctagagcttacacaattaaattatggagaagtggagtgtccggg 44857241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 10772 - 10833
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| |||||||||||||||||||||    
T  10772 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggg 10833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 27876 - 27937
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   ||||||| ||||| ||||||| ||||||||||| |||||||||    
T  27876 ggtcaagtagcctagtggctagaactcacacaatttaattgtggagaagtggagtgtccggg 27937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 23484 - 23423
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||  ||||| || ||||| ||||||| ||||||||||| |||||||||    
T  23484 ggtcaagtagcctagtggttagagctcacacaatttaattatggagaagtggagtgtccggg 23423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 34; Significance: 0.0000000006; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 3766935 - 3766874
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||  ||||| || ||||| ||||||| ||||||||||| |||||||||    
T  3766935 ggtcaagtagcctagtggttagagctcacacaatttaattgtggagaagtggagtgtccggg 3766874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 9877213 - 9877274
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||| ||||||||   ||||||| ||||| ||||||| |||||||||||||||||||||    
T  9877213 ggtcaaggagcctagtggctagaactcacacaatttaattgtggagaagtggggtgtccggg 9877274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 10244835 - 10244896
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| |||||||||||||||||||||    
T  10244835 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtccggg 10244896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 23102504 - 23102565
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||| ||||||||||   ||||||| ||||| ||||||| |||||||||||||||||||||    
T  23102504 ggtcaggtagcctagtggctagaactcacacaatttaattgtggagaagtggggtgtccggg 23102565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 32074341 - 32074402
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||||||||||||  |||| || ||||| ||||||| ||||||||||| |||||||||    
T  32074341 ggtcaagtagcctagtagctagagctcacacaatttaattgtggagaagtggagtgtccggg 32074402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 26122153 - 26122093
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||| || ||||| || ||||| ||||||| ||||||||||| |||||||||    
T  26122153 gtcaagtagcctactagttagagctcacacaatttaattgtggagaagtggagtgtccggg 26122093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 386
Target Start/End: Original strand, 1563687 - 1563746
Alignment:
Q  327 tcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||  ||||| || ||||| ||||||| | |||||||||||||||||||    
T  1563687 tcaagtagcctagtggttagagctcacacaatttaattgtagagaagtggggtgtccggg 1563746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 383
Target Start/End: Original strand, 43119378 - 43119436
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtcc 383  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||||||||||    
T  43119378 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtcc 43119436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 3062898 - 3062837
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  3062898 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 3062837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 336 - 393
Target Start/End: Original strand, 27678967 - 27679024
Alignment:
Q  336 ctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattcaaa 393  Q
    ||||| ||||||||| ||| | ||||||| |||||||||| |||||||||||| ||||    
T  27678967 ctagtgattagaactcacataatttaattgtggagaagtgcggtgtccgggatacaaa 27679024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 29617529 - 29617468
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  29617529 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 29617468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 35950252 - 35950191
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  35950252 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 35950191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 390
Target Start/End: Complemental strand, 42443813 - 42443748
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattc 390  Q
    ||||||||||||||||   |||| || |||||  |||||| ||||||||||| |||||||||||||    
T  42443813 ggtcaagtagcctagtggctagagctcacacaacttaattgtggagaagtggagtgtccgggattc 42443748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 44616726 - 44616665
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||||| |||||  ||||| || ||||| ||||||| ||||||||||| |||||||||    
T  44616726 ggtcaagtagtctagtggttagagctcacacaatttaattgtggagaagtggagtgtccggg 44616665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 390
Target Start/End: Complemental strand, 47999904 - 47999839
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattc 390  Q
    |||||||||||||| |   |||| || ||||| ||||||| ||||||||||| |||||||||||||    
T  47999904 ggtcaagtagcctaatggctagagctcacacaatttaattatggagaagtggagtgtccgggattc 47999839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 385
Target Start/End: Complemental strand, 12615875 - 12615815
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgg 385  Q
    |||||||||| |||||  ||||| || ||||| ||||||| |||||||| |||||||||||    
T  12615875 ggtcaagtagtctagtggttagagctcacacaatttaattgtggagaagcggggtgtccgg 12615815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 28805423 - 28805363
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||| |||||  ||||| || || || ||||||| |||||||||||||||||||||    
T  28805423 gtcaagtagtctagtggttagagctcactcaatttaattgtggagaagtggggtgtccggg 28805363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 31026342 - 31026282
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  31026342 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 31026282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 32619473 - 32619413
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  32619473 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 32619413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 34267498 - 34267558
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||| | |||| || ||||| ||||||| ||||||||||  |||||||||    
T  34267498 gtcaagtagcctagtgactagagctcacacaatttaattgtggagaagtgaagtgtccggg 34267558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 40705957 - 40705897
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||| ||| |||| || ||||| ||||||| ||| ||||||| |||||||||    
T  40705957 gtcaagtagcctaataactagagctcacacaatttaattgtggcgaagtggagtgtccggg 40705897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 390
Target Start/End: Original strand, 43633037 - 43633101
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattc 390  Q
    |||||| ||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||||||    
T  43633037 gtcaagcagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccgggattc 43633101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 385
Target Start/End: Original strand, 45640038 - 45640098
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgg 385  Q
    |||||||||||||||| | |||| || ||||| ||||||| | ||||||||| ||||||||    
T  45640038 ggtcaagtagcctagtgactagagctcacacaatttaattatagagaagtggagtgtccgg 45640098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 45669720 - 45669780
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||  |||| || ||||| ||||||| ||||||| ||| |||||||||    
T  45669720 gtcaagtagcctagtagatagagctcacacaatttaattgtggagaaatggagtgtccggg 45669780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 390
Target Start/End: Original strand, 65734 - 65798
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattc 390  Q
    ||||||||||||||| |||||| || ||||| || |||| || |||||||| |||||||||||||    
T  65734 gtcaagtagcctagtgattagagctcacacaattaaattgtgaagaagtggagtgtccgggattc 65798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 385
Target Start/End: Complemental strand, 6558925 - 6558865
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgg 385  Q
    |||||||||||||||| | |||| || ||||| ||||||| ||||||||| ||||||||||    
T  6558925 ggtcaagtagcctagtgactagagctcacacaatttaattgtggagaagtagggtgtccgg 6558865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 390
Target Start/End: Complemental strand, 36124522 - 36124458
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattc 390  Q
    ||||||||| |||||  ||||| || |||||||| |||| ||||||||||| |||||||||||||    
T  36124522 gtcaagtagtctagtggttagagctcacacagttaaattgtggagaagtggagtgtccgggattc 36124458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 326 - 393
Target Start/End: Original strand, 13799371 - 13799438
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattcaaa 393  Q
    ||||||||||||||||  ||||||| ||||| ||||||| ||||||| |||| ||||| || ||||||    
T  13799371 gtcaagtagcctagtagctagaactcacacaatttaattgtggagaaatgggatgtccagggttcaaa 13799438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 325 - 383
Target Start/End: Complemental strand, 21918176 - 21918118
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtcc 383  Q
    |||||||||||||||| | |||| || ||||| ||||||| ||||||||||| ||||||    
T  21918176 ggtcaagtagcctagtgactagagctcacacaatttaattgtggagaagtggagtgtcc 21918118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 4745822 - 4745883
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  4745822 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 4745883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 8968873 - 8968812
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  8968873 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 8968812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 11795617 - 11795556
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  11795617 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 11795556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 12463880 - 12463819
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  12463880 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 12463819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 379
Target Start/End: Complemental strand, 24133079 - 24133026
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggt 379  Q
    ||||||||||||||| | |||| || ||||| ||||||| ||||||||||||||    
T  24133079 gtcaagtagcctagtgactagagctcacacaatttaattgtggagaagtggggt 24133026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 25400313 - 25400374
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  25400313 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 25400374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 383
Target Start/End: Complemental strand, 29691480 - 29691423
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtcc 383  Q
    |||||||||||||||   |||| || ||||| ||||||| ||||||||||||||||||    
T  29691480 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggggtgtcc 29691423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 326 - 395
Target Start/End: Complemental strand, 32706445 - 32706376
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattcaaatc 395  Q
    ||||||||||||| | | |||| || ||||| ||||||| ||||||||||| ||||||||| ||| ||||    
T  32706445 gtcaagtagcctaatgactagagctcacacaatttaattgtggagaagtggagtgtccggggttcgaatc 32706376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 9835156 - 9835096
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  9835156 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 9835096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 393
Target Start/End: Original strand, 17064805 - 17064872
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattcaaa 393  Q
    ||||||||||||||||   ||||||| ||||| || ||| | |||||||||||||||||||| ||||||    
T  17064805 ggtcaagtagcctagtggctagaactcacacaattaaatgt-ggagaagtggggtgtccggggttcaaa 17064872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 21749325 - 21749385
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  21749325 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 21749385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 29154965 - 29154905
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||||| ||||   ||||||| ||||| ||||||| ||||||||||| |||||||||    
T  29154965 gtcaagtagcgtagtggctagaactcacacaatttaattgtggagaagtggagtgtccggg 29154905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 390
Target Start/End: Original strand, 34824409 - 34824473
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattc 390  Q
    |||||||||| |||| | |||| || |||||||| |||| ||||||||||| ||||||| |||||    
T  34824409 gtcaagtagcttagtgactagagctcacacagttaaattatggagaagtggagtgtccgagattc 34824473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 385
Target Start/End: Complemental strand, 41156452 - 41156392
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgg 385  Q
    |||||||||||||||| | |||| || ||||  ||||||| ||||||||||| ||||||||    
T  41156452 ggtcaagtagcctagtgactagagctcacacgatttaattgtggagaagtggagtgtccgg 41156392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 390
Target Start/End: Complemental strand, 43581001 - 43580937
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattc 390  Q
    ||||||||| |||||   |||| || ||||| ||||||| ||||||||||| |||||||||||||    
T  43581001 gtcaagtagtctagtggctagagctcacacaatttaattgtggagaagtggagtgtccgggattc 43580937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Complemental strand, 17744 - 17683
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  17744 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 17683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 386
Target Start/End: Original strand, 18425 - 18486
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||||||||| |   |||| || ||||| ||||||| |||||||||||||||||||||    
T  18425 ggtcaagtagcctaatggctagagctcacacaatttaattgtggagaagtggggtgtccggg 18486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 3789 - 3729
Alignment:
Q  326 gtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccggg 386  Q
    |||||||||||||||   |||| || ||||| ||||||| ||||||||||| |||||||||    
T  3789 gtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtgtccggg 3729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 325 - 393
Target Start/End: Complemental strand, 112232 - 112164
Alignment:
Q  325 ggtcaagtagcctagtaattagaacttacacagtttaattttggagaagtggggtgtccgggattcaaa 393  Q
    ||||||||||||||||   |||| || ||||| ||||||| ||||||||||| || |||| ||||||||    
T  112232 ggtcaagtagcctagtggctagagctcacacaatttaattgtggagaagtggagtatccgagattcaaa 112164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University