View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5175_low_21 (Length: 239)

Name: NF5175_low_21
Description: NF5175
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5175_low_21
NF5175_low_21
[»] chr1 (9 HSPs)
chr1 (1-222)||(3300140-3300361)
chr1 (1-222)||(43044406-43044627)
chr1 (1-222)||(43067364-43067585)
chr1 (1-222)||(43083250-43083471)
chr1 (1-221)||(43077242-43077462)
chr1 (1-205)||(45984363-45984567)
chr1 (1-219)||(38138516-38138734)
chr1 (1-206)||(7891621-7891826)
chr1 (5-136)||(50911851-50911982)
[»] chr4 (2 HSPs)
chr4 (1-222)||(4230871-4231092)
chr4 (101-146)||(19965284-19965329)
[»] chr6 (2 HSPs)
chr6 (1-222)||(7520375-7520596)
chr6 (1-222)||(7529912-7530133)
[»] chr8 (3 HSPs)
chr8 (1-219)||(4619095-4619313)
chr8 (86-222)||(4296931-4297067)
chr8 (86-211)||(4788124-4788249)
[»] chr5 (1 HSPs)
chr5 (5-216)||(16348557-16348768)
[»] chr2 (3 HSPs)
chr2 (13-216)||(33860252-33860455)
chr2 (81-136)||(34690326-34690381)
chr2 (81-136)||(34712738-34712793)


Alignment Details
Target: chr1 (Bit Score: 218; Significance: 1e-120; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 3300140 - 3300361
Alignment:
Q  1 tcttaataataccagcatcaccgttcttcaagaatttgggctccttctcaatctcctttccagaacgcctgtcaatcttagtaacaagctcagcaaattt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3300140 tcttaataataccagcatcaccgttcttcaagaatttgggctccttctcaatctcctttccagaacgcctgtcaatcttagtaacaagctcagcaaattt 3300239  T
Q  101 gacagcaatgtgggaggtgtggcagtcaagaacaggggcatagccatttccaatctggccagggtgattcatgatgatcacttgagatgtaaagttagca 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3300240 gacagcaatgtgggaggtgtggcagtcaagaacaggggcatagccatttccaatctggccagggtgattcataatgatcacttgagatgtaaagttagca 3300339  T
Q  201 gcctccttggcagggtcatcct 222  Q
    ||||||||||||||||||||||    
T  3300340 gcctccttggcagggtcatcct 3300361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 43044406 - 43044627
Alignment:
Q  1 tcttaataataccagcatcaccgttcttcaagaatttgggctccttctcaatctcctttccagaacgcctgtcaatcttagtaacaagctcagcaaattt 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||    
T  43044406 tcttaataataccagcatcgccattcttcaagaatttgggctccttctcaatctccttaccagaacgcctatcaatcttagtaacaagctcagcaaactt 43044505  T
Q  101 gacagcaatgtgggaggtgtggcagtcaagaacaggggcatagccatttccaatctggccagggtgattcatgatgatcacttgagatgtaaagttagca 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43044506 gacagcaatgtgggaggtgtggcagtcaagaacaggggcatagccatttccaatctggccagggtgattcattatgatcacttgagatgtaaagttagca 43044605  T
Q  201 gcctccttggcagggtcatcct 222  Q
    ||||||||||| ||||||||||    
T  43044606 gcctccttggctgggtcatcct 43044627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 43067585 - 43067364
Alignment:
Q  1 tcttaataataccagcatcaccgttcttcaagaatttgggctccttctcaatctcctttccagaacgcctgtcaatcttagtaacaagctcagcaaattt 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||    
T  43067585 tcttaataataccagcatcgccattcttcaagaatttgggctccttctcaatctccttaccagaacgcctatcaatcttagtaacaagctcagcaaactt 43067486  T
Q  101 gacagcaatgtgggaggtgtggcagtcaagaacaggggcatagccatttccaatctggccagggtgattcatgatgatcacttgagatgtaaagttagca 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43067485 gacagcaatgtgggaggtgtggcagtcaagaacaggggcatagccatttccaatctggccagggtgattcattatgatcacttgagatgtaaagttagca 43067386  T
Q  201 gcctccttggcagggtcatcct 222  Q
    ||||||||||| ||||||||||    
T  43067385 gcctccttggctgggtcatcct 43067364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 43083250 - 43083471
Alignment:
Q  1 tcttaataataccagcatcaccgttcttcaagaatttgggctccttctcaatctcctttccagaacgcctgtcaatcttagtaacaagctcagcaaattt 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||    
T  43083250 tcttaataataccagcatcgccattcttcaagaatttgggctccttctcaatctccttaccagaacgcctatcaatcttagtaacaagctcagcaaactt 43083349  T
Q  101 gacagcaatgtgggaggtgtggcagtcaagaacaggggcatagccatttccaatctggccagggtgattcatgatgatcacttgagatgtaaagttagca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43083350 gacagcaatgtgggaggtgtggcagtcaagaacaggggcatagccatttccaatctggccagggtgattcatgatgatcacttgagatgtaaagttagca 43083449  T
Q  201 gcctccttggcagggtcatcct 222  Q
    || |||||||| ||||||||||    
T  43083450 gcttccttggctgggtcatcct 43083471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 43077462 - 43077242
Alignment:
Q  1 tcttaataataccagcatcaccgttcttcaagaatttgggctccttctcaatctcctttccagaacgcctgtcaatcttagtaacaagctcagcaaattt 100  Q
    |||||||||||||||||||||| ||| ||| ||||||||||| | |||||||| || | ||||||||||| |||||||| |||||||||||| |||| ||    
T  43077462 tcttaataataccagcatcaccattcatcaggaatttgggcttcgtctcaatcaccataccagaacgcctatcaatcttggtaacaagctcatcaaactt 43077363  T
Q  101 gacagcaatgtgggaggtgtggcagtcaagaacaggggcatagccatttccaatctggccagggtgattcatgatgatcacttgagatgtaaagttagca 200  Q
    ||||  ||||||| |||||||||||| ||||||||| |||||||||||| |||||| ||||||||||||||||| ||  ||||||||||||||||||||     
T  43077362 gacaagaatgtggaaggtgtggcagtgaagaacaggtgcatagccattttcaatcttgccagggtgattcatgacgacgacttgagatgtaaagttagcg 43077263  T
Q  201 gcctccttggcagggtcatcc 221  Q
    ||||||||||| |||||||||    
T  43077262 gcctccttggctgggtcatcc 43077242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 45984567 - 45984363
Alignment:
Q  1 tcttaataataccagcatcaccgttcttcaagaatttgggctccttctcaatctcctttccagaacgcctgtcaatcttagtaacaagctcagcaaattt 100  Q
    ||||||||||||||| ||||||  || |||| |||||||||||| ||||||| ||||  ||||||| |||||||| ||| | || |||||||||||| ||    
T  45984567 tcttaataataccagtatcaccactcatcaaaaatttgggctccctctcaatttcctcaccagaacacctgtcaaccttggaaataagctcagcaaactt 45984468  T
Q  101 gacagcaatgtgggaggtgtggcagtcaagaacaggggcatagccatttccaatctggccagggtgattcatgatgatcacttgagatgtaaagttagca 200  Q
    |||||||||||||||||||||||||||||||||||| |  |||||||||| ||||||||||||||||||| | ||||| ||  |||||||||||| |||     
T  45984467 gacagcaatgtgggaggtgtggcagtcaagaacaggtgtgtagccatttcgaatctggccagggtgattcgtaatgataacaagagatgtaaagtgagcg 45984368  T
Q  201 gcctc 205  Q
    |||||    
T  45984367 gcctc 45984363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 38138734 - 38138516
Alignment:
Q  1 tcttaataataccagcatcaccgttcttcaagaatttgggctccttctcaatctcctttccagaacgcctgtcaatcttagtaacaagctcagcaaattt 100  Q
    |||||| || |||||||||||| |||||||||||||||||||||||||| || |||   ||||||  |||||||| ||| |||||||||| |||||| ||    
T  38138734 tcttaacaacaccagcatcaccattcttcaagaatttgggctccttctcgatttccaaaccagaaaacctgtcaaacttggtaacaagcttagcaaactt 38138635  T
Q  101 gacagcaatgtgggaggtgtggcagtcaagaacaggggcatagccatttccaatctggccagggtgattcatgatgatcacttgagatgtaaagttagca 200  Q
    ||||| || |||||||||||||||||| |||| ||| | ||||||||||  |||| ||||||  |||||| ||||||| ||  | |||||||| ||||||    
T  38138634 gacaggaacgtgggaggtgtggcagtccagaataggtgtatagccattttgaatccggccagtttgattcgtgatgataacacgggatgtaaatttagca 38138535  T
Q  201 gcctccttggcagggtcat 219  Q
    |||||| |||| |||||||    
T  38138534 gcctccgtggctgggtcat 38138516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 206
Target Start/End: Complemental strand, 7891826 - 7891621
Alignment:
Q  1 tcttaataataccagcatcaccgttcttcaagaatttgggctccttctcaatctcctttccagaacgcctgtcaatcttagtaacaagctcagcaaattt 100  Q
    ||||||||||||||||||| || ||||||||||||||||||||||||||||  ||      || |  |||||||| |||  |||||||||  ||||| ||    
T  7891826 tcttaataataccagcatcgccattcttcaagaatttgggctccttctcaaattcaacattagtattcctgtcaaacttgctaacaagcttggcaaactt 7891727  T
Q  101 gacagcaatgtgggaggtgtggcagtcaagaacaggggcatagccatttccaatctggccagggtgattcatgatgatcacttgagatgtaaagttagca 200  Q
    ||||||||||||||||||||||||||| |||| ||| | ||||||||||| |||||||||||| ||||||| |||||| || ||||||||||| | ||||    
T  7891726 gacagcaatgtgggaggtgtggcagtcgagaataggtgtatagccatttctaatctggccaggatgattcaagatgataacatgagatgtaaattcagca 7891627  T
Q  201 gcctcc 206  Q
    ||||||    
T  7891626 gcctcc 7891621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 50911851 - 50911982
Alignment:
Q  5 aataataccagcatcaccgttcttcaagaatttgggctccttctcaatctcctttccagaacgcctgtcaatcttagtaacaagctcagcaaatttgaca 104  Q
    ||||| |||||| ||||| ||||||||||||||||||||||||||||| |||     | || ||||  || |||| |||||||||| |||||| ||||||    
T  50911851 aataacaccagcgtcaccattcttcaagaatttgggctccttctcaatttccacaaaataatgcctaacattcttggtaacaagcttagcaaacttgaca 50911950  T
Q  105 gcaatgtgggaggtgtggcagtcaagaacagg 136  Q
    ||||||| ||| |||||||| | |||||||||    
T  50911951 gcaatgttggacgtgtggcaatgaagaacagg 50911982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 170; Significance: 2e-91; HSPs: 2)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 4230871 - 4231092
Alignment:
Q  1 tcttaataataccagcatcaccgttcttcaagaatttgggctccttctcaatctcctttccagaacgcctgtcaatcttagtaacaagctcagcaaattt 100  Q
    ||||||||||||||||||| || ||||||| |||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||    
T  4230871 tcttaataataccagcatctccattcttcaggaatttaggctccttctcgatctccttaccagaacgcctgtcaatcttagtaacaagctcagcaaactt 4230970  T
Q  101 gacagcaatgtgggaggtgtggcagtcaagaacaggggcatagccatttccaatctggccagggtgattcatgatgatcacttgagatgtaaagttagca 200  Q
    ||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||    
T  4230971 gactgcaatgtgggaggtgtggcagtcaagaacaggggcataaccatttccaatctggccagggtgattcatgataatcacctgagatgtgaagttagca 4231070  T
Q  201 gcctccttggcagggtcatcct 222  Q
    ||||||||||| ||||||||||    
T  4231071 gcctccttggctgggtcatcct 4231092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 101 - 146
Target Start/End: Complemental strand, 19965329 - 19965284
Alignment:
Q  101 gacagcaatgtgggaggtgtggcagtcaagaacaggggcatagcca 146  Q
    |||||||||||||||||||||||||||||||||||| | |||||||    
T  19965329 gacagcaatgtgggaggtgtggcagtcaagaacaggtgtatagcca 19965284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 126; Significance: 4e-65; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 7520596 - 7520375
Alignment:
Q  1 tcttaataataccagcatcaccgttcttcaagaatttgggctccttctcaatctcctttccagaacgcctgtcaatcttagtaacaagctcagcaaattt 100  Q
    ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||| |||||||| |||||||| ||    
T  7520596 tcttaatgataccagcatcaccgttcttcaagaacttgggctccttctcaatctccttaccagatcgcctgtcaatcttggtaacaagttcagcaaactt 7520497  T
Q  101 gacagcaatgtgggaggtgtggcagtcaagaacaggggcatagccatttccaatctggccagggtgattcatgatgatcacttgagatgtaaagttagca 200  Q
     ||||||||||| ||||||||||| || || || || ||||| |||||||||||||| |||||||| ||||||||||| ||||| || || ||||| |||    
T  7520496 cacagcaatgtgagaggtgtggcaatcgagcactggtgcatatccatttccaatctgtccagggtggttcatgatgatgacttgggaagtgaagttggca 7520397  T
Q  201 gcctccttggcagggtcatcct 222  Q
    || ||||| |||||||||||||    
T  7520396 gcttcctttgcagggtcatcct 7520375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 7530133 - 7529912
Alignment:
Q  1 tcttaataataccagcatcaccgttcttcaagaatttgggctccttctcaatctcctttccagaacgcctgtcaatcttagtaacaagctcagcaaattt 100  Q
    ||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||| |||||||| |||||||| ||    
T  7530133 tcttaatgataccagcatcaccattcttcaagaacttgggctccttctcaatctccttaccagatcgcctgtcaatcttggtaacaagttcagcaaactt 7530034  T
Q  101 gacagcaatgtgggaggtgtggcagtcaagaacaggggcatagccatttccaatctggccagggtgattcatgatgatcacttgagatgtaaagttagca 200  Q
     ||||||||||| ||||||||||| || || || || ||||| |||||||||||||| |||||||| ||||||||||| ||||| || || ||||| |||    
T  7530033 cacagcaatgtgagaggtgtggcaatcgagcactggtgcatatccatttccaatctgtccagggtggttcatgatgatgacttgggaagtgaagttggca 7529934  T
Q  201 gcctccttggcagggtcatcct 222  Q
    || ||||| |||||||||||||    
T  7529933 gcttcctttgcagggtcatcct 7529912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 99; Significance: 5e-49; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 4619095 - 4619313
Alignment:
Q  1 tcttaataataccagcatcaccgttcttcaagaatttgggctccttctcaatctcctttccagaacgcctgtcaatcttagtaacaagctcagcaaattt 100  Q
    |||||||||| ||||||||||| ||||||| |||||||||||| ||||||||  |||| ||||||| |||||||||||| |  | ||||| | |||| ||    
T  4619095 tcttaataatgccagcatcaccattcttcaggaatttgggctcattctcaattaccttaccagaacacctgtcaatcttggctagaagcttatcaaactt 4619194  T
Q  101 gacagcaatgtgggaggtgtggcagtcaagaacaggggcatagccatttccaatctggccagggtgattcatgatgat--cacttgagatgtaaagttag 198  Q
    ||||||| |||||||||||||||| | ||||||||| | ||||||||||||||||||||||||||||||| |||||||  ||| |||||||  ||||||     
T  4619195 gacagcagtgtgggaggtgtggcaatgaagaacaggtgtatagccatttccaatctggccagggtgattcctgatgataacacatgagatg--aagttat 4619292  T
Q  199 cagcctccttggcagggtcat 219  Q
    | ||||||||||| |||||||    
T  4619293 ctgcctccttggctgggtcat 4619313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 86 - 222
Target Start/End: Original strand, 4296931 - 4297067
Alignment:
Q  86 aagctcagcaaatttgacagcaatgtgggaggtgtggcagtcaagaacaggggcatagccatttccaatctggccagggtgattcatgatgatcacttga 185  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||| ||| | |||||| | | ||||||||| |||||||||  ||||||| || |||    
T  4296931 aagctcagcaaatttgacaggaatgtgggaggtgtggcagtgaagaataggtgtatagccttcttcaatctggctagggtgatttgtgatgataacatga 4297030  T
Q  186 gatgtaaagttagcagcctccttggcagggtcatcct 222  Q
    |||||||||| ||   |||||||||| ||||||||||    
T  4297031 gatgtaaagtgagtgacctccttggctgggtcatcct 4297067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 86 - 211
Target Start/End: Complemental strand, 4788249 - 4788124
Alignment:
Q  86 aagctcagcaaatttgacagcaatgtgggaggtgtggcagtcaagaacaggggcatagccatttccaatctggccagggtgattcatgatgatcacttga 185  Q
    ||||||| |||||| ||||||||| |||||||||||||||| ||||| ||| | |||||| ||| ||||||| |||||||||||  ||||||| || |||    
T  4788249 aagctcatcaaattcgacagcaatttgggaggtgtggcagtgaagaataggcgtatagcctttttcaatctgtccagggtgatttgtgatgataacatga 4788150  T
Q  186 gatgtaaagttagcagcctccttggc 211  Q
    |||||||||| | | |||||||||||    
T  4788149 gatgtaaagtaatcggcctccttggc 4788124  T

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Target: chr5 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 216
Target Start/End: Original strand, 16348557 - 16348768
Alignment:
Q  5 aataataccagcatcaccgttcttcaagaatttgggctccttctcaatctcctttccagaacgcctgtcaatcttagtaacaagctcagcaaatttgaca 104  Q
    |||||| ||| ||||||| |||||||||||||||||||||||| ||||   ||| ||||||  |||||| | ||| | || ||||| |||||| ||||||    
T  16348557 aataatgccaccatcacctttcttcaagaatttgggctccttcacaattatcttgccagaaaacctgtctaccttggcaagaagcttagcaaacttgaca 16348656  T
Q  105 gcaatgtgggaggtgtggcagtcaagaacaggggcatagccatttccaatctggccagggtgattcatgatgatcacttgagatgtaaagttagcagcct 204  Q
    ||||||| |||||||||||||| ||||||||| | ||| || ||| |||| ||||||||||||||| ||||||| ||||||||||||||||||   ||||    
T  16348657 gcaatgtaggaggtgtggcagttaagaacaggtgtataacccttttcaatttggccagggtgattcgtgatgataacttgagatgtaaagttaatggcct 16348756  T
Q  205 ccttggcagggt 216  Q
    ||||||| ||||    
T  16348757 ccttggctgggt 16348768  T

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Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 216
Target Start/End: Original strand, 33860252 - 33860455
Alignment:
Q  13 cagcatcaccgttcttcaagaatttgggctccttctcaatctcctttccagaacgcctgtcaatcttagtaacaagctcagcaaatttgacagcaatgtg 112  Q
    ||||||||||  ||||||||||||  |||||||||||||| ||||| ||| ||  || ||||| ||| | || ||||||| ||||  ||||||||| |||    
T  33860252 cagcatcaccactcttcaagaattcaggctccttctcaatttccttaccataaaaccagtcaaccttggcaataagctcaacaaacatgacagcaacgtg 33860351  T
Q  113 ggaggtgtggcagtcaagaacaggggcatagccatttccaatctggccagggtgattcatgatgatcacttgagatgtaaagttagcagcctccttggca 212  Q
    |||||||||||||||||||| ||| | | |||| |||| |||| ||||||||| |||  ||||||| |||||||||||||||| ||| || ||| ||||     
T  33860352 ggaggtgtggcagtcaagaataggtgtaaagccttttctaatcaggccagggtcatttgtgatgataacttgagatgtaaagtgagcggcttccgtggct 33860451  T
Q  213 gggt 216  Q
    ||||    
T  33860452 gggt 33860455  T

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Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 34690326 - 34690381
Alignment:
Q  81 gtaacaagctcagcaaatttgacagcaatgtgggaggtgtggcagtcaagaacagg 136  Q
    |||||||||| |||||| ||||||||| ||||||||| |||||||||||| |||||    
T  34690326 gtaacaagcttagcaaacttgacagcagtgtgggaggcgtggcagtcaaggacagg 34690381  T

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Target: chr2; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 81 - 136
Target Start/End: Original strand, 34712738 - 34712793
Alignment:
Q  81 gtaacaagctcagcaaatttgacagcaatgtgggaggtgtggcagtcaagaacagg 136  Q
    |||||||||| |||||| ||||||||| ||||||||| |||||||||||| |||||    
T  34712738 gtaacaagcttagcaaacttgacagcagtgtgggaggcgtggcagtcaaggacagg 34712793  T

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