View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5176-Insertion-15 (Length: 223)
Name: NF5176-Insertion-15
Description: NF5176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5176-Insertion-15 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 29 - 223
Target Start/End: Original strand, 31729666 - 31729860
Alignment:
| Q |
29 |
atataatcttatgaatgttattaacgattatatagggaagattaggggagtggttagaattagctgtgaagagaatttcacagaaatttgtactgcaaaa |
128 |
Q |
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| T |
31729666 |
atataatcttatgaatgttattaacgattatatagggaagattaggggagtggttagaattagctgtgaagagaatttcacagaaatttgtactgcaaaa |
31729765 |
T |
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| Q |
129 |
cttattgcatatgttcaaagcactgaaatcttgtaaagttgttgtattcagagacatggaaaaatggtagtttatgactacatggccgaccatag |
223 |
Q |
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| T |
31729766 |
cttattgcatatgttgaaagcactggaatcttgtaaagttgttgtattcagagacatggaaaaatggtagtttatgaatacatggccgaccatag |
31729860 |
T |
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