View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5176-Insertion-4 (Length: 882)
Name: NF5176-Insertion-4
Description: NF5176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5176-Insertion-4 |
 | |
|
| [»] chr8 (20 HSPs) |
| |
|
Alignment Details
Target: chr8 (Bit Score: 807; Significance: 0; HSPs: 20)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 807; E-Value: 0
Query Start/End: Original strand, 7 - 882
Target Start/End: Complemental strand, 6363431 - 6362557
Alignment:
| Q |
7 |
agaacaggtaaatctttacccaattcaacaactttactctnnnnnnntaattcaacagtgctaaattttattttgtggaacaggctatccagaataataa |
106 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6363431 |
agaacaggtaaatctctacccaattcaacaactttactctaaaaaaataattcaacagtgctaaattttattttgtggaacaggctatccagaataataa |
6363332 |
T |
|
| Q |
107 |
attgttcatactggatcaccacgacccactctttccatatttgaggaaaataaatgcaaccgagactaaggcctatgctactagaaccattcttttcttg |
206 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6363331 |
attgttcatactggatcaccacgacccactctttccatatttgaggaaaataaatgcaaccgagactaaggcctatgctactagaaccattcttttcttg |
6363232 |
T |
|
| Q |
207 |
caagatgatggaactttgaagccattggccattgaactaagcaggccacaccctcaaggtgatagttttggtcctgttagcaatgtttacttgcccgcaa |
306 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |
|
|
| T |
6363231 |
caagatgatggaactttgaagccattggccattgaactaagtaggccacaccctcaaggtgatagttttggtcctgttagcaaagtttacttgcctgcaa |
6363132 |
T |
|
| Q |
307 |
gtgaaggtgttgaagcttcaatttggctccttgccaaggcttacgtaattgtaaatgattcatgttatcaccaacttgttagccattggtatgaatttcg |
406 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6363131 |
gtgaaggtgttgaagcttcaatttggctccttgccaaggcttacgtaattgtaaatgattcatgttatcaccaacttgttagccattggtatgaatttcg |
6363032 |
T |
|
| Q |
407 |
tttatgatatttaaacaatcaaataaattttatacatctatgggtaatttgatgaaaatttatctacaatttgtgacaggttgaacactcatgctgtagt |
506 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
6363031 |
tttatgatatttaaacaatcaaataaattttatacatctatgagtaatttgatgaaaatttatctacaatgtgtgacaggttgaacactcatgctgtagt |
6362932 |
T |
|
| Q |
507 |
tgagccattcgtcatagcaacaaataggcatctaagtgtggttcaccctattcataaacttctgcttccacattatcgtgacacgatgaacataaatgca |
606 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6362931 |
tgagccattcgtcatagcaacaaataggcatctaagtgtggttcaccctattcataaacttctgcttccacattatcgtgacacgatgaacataaatgca |
6362832 |
T |
|
| Q |
607 |
ctagcacgaaatgtgttggtcaatgccgagggtattatcgagtcaactttcttgtggggaaagtatgctttggaaatgtcttctgtcgtttacaaggatt |
706 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6362831 |
ctagcacgaaatgtgttggtcaatgccgagggtattatcgagtcaactttcttgtggggaaagtatgctttggaaatgtcttctgtcgtttacaaggatt |
6362732 |
T |
|
| Q |
707 |
gggttttcactgagcaaggcctacctaatgatctaatcaaaaggtaaccttgcaaaacattacatcttgactcagtccattttttaaaaagatattgatc |
806 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
6362731 |
gggttttcactgagcaaggcctacctaatgatctaatcaaaaggtaaccttacaaaacattacatcttgactcagtccgttttttaaaaagatattgatc |
6362632 |
T |
|
| Q |
807 |
tcaaatataataccacacggtttcagttcaatggtaaatgtttgactttggagccatgttatagagctagtagaga |
882 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
6362631 |
tcaagtataataccacacggtttcagttcaatggtaaatgtttgactttgtagccatg-tatagagctagtagaga |
6362557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 387; E-Value: 0
Query Start/End: Original strand, 66 - 757
Target Start/End: Complemental strand, 6352433 - 6351748
Alignment:
| Q |
66 |
gctaaattttattttgtggaacaggctatccagaataataaattgttcatactggatcaccacgacccactctttccatatttgaggaaaataaatgcaa |
165 |
Q |
| |
|
||||||||||||||||| |||||||||||| | |||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6352433 |
gctaaattttattttgtcatacaggctatccaagacaatagattgtacatacttgatcaccacgacccactctttccatatttgaggaaaataaatgcaa |
6352334 |
T |
|
| Q |
166 |
ccgagactaaggcctatgctactagaaccattcttttcttgcaagatgatggaactttgaagccattggccattgaactaagcaggccacaccctcaagg |
265 |
Q |
| |
|
||||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
6352333 |
ccgagacaaaggcctatgctaccagaaccatacttttcttgcaagatgatggaactttgaagccactggccattgaactaagcaggccacaccctcaagg |
6352234 |
T |
|
| Q |
266 |
tgatagttttggtcctgttagcaatgtttacttgcccgcaagtgaaggtgttgaagcttcaatttggctccttgccaaggcttacgtaattgtaaatgat |
365 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
6352233 |
tgatagttttggtcctgttagcaatgtttacttgcccgcaagtgaaggtgttgaagcttcaatttggctccttgccaaggcttttgttgttgtaaatgac |
6352134 |
T |
|
| Q |
366 |
tcatgttatcaccaacttgttagccattggtatgaatttcgtttatgatatttaaacaatcaaataaattttatacatctatgggtaatttgatgaaaat |
465 |
Q |
| |
|
|| || ||||| |||||||| |||||||||||||||| || || || | | || ||||||||| | | || | ||||||| ||| || ||||| |
|
|
| T |
6352133 |
tcctgctatcatcaacttgtcagccattggtatgaatctcattaatcacgtatacacaatcaaacataattaacctatctatgattaa-ttcatgaa--- |
6352038 |
T |
|
| Q |
466 |
ttatctacaatttgtgacaggttgaacactcatgctgtagttgagccattcgtcatagcaacaaataggcatctaagtgtggttcaccctattcataaac |
565 |
Q |
| |
|
|||| || || ||||||||||||||||| || ||||| |||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||| |
|
|
| T |
6352037 |
-tatcgac-atgtgtgacaggttgaacacccacgctgttgttgagccattcatcatagcaacaaacaggcatcttagtgtggttcaccctattcataaac |
6351940 |
T |
|
| Q |
566 |
ttctgcttccacattatcgtgacacgatgaacataaatgcactagcacgaaatgtgttggtcaatgccgagggtattatcgagtcaactttcttgtgggg |
665 |
Q |
| |
|
|| | ||||| || || |||||||| ||||||||||||||||| ||||||||||| ||||||||||| ||||||||||| || ||||| ||||||||||| |
|
|
| T |
6351939 |
ttttacttcctcactaccgtgacacaatgaacataaatgcacttgcacgaaatgtcttggtcaatgcagagggtattatagaatcaaccttcttgtgggg |
6351840 |
T |
|
| Q |
666 |
aaagtatgctttggaaatgtcttctgtcgtttacaaggattgggttttcactgagcaaggcctacctaatgatctaatcaaaaggtaacctt |
757 |
Q |
| |
|
||| |||||||||||||||||| |||| ||||||||||||||| ||||| ||||||||| |||||||| |||||||||||||||||||||| |
|
|
| T |
6351839 |
aaattatgctttggaaatgtctgctgttgtttacaaggattggaatttcattgagcaaggactacctaacgatctaatcaaaaggtaacctt |
6351748 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 375; E-Value: 0
Query Start/End: Original strand, 66 - 807
Target Start/End: Complemental strand, 7459268 - 7458520
Alignment:
| Q |
66 |
gctaaattttattttgtggaacaggctatccagaataataaattgttcatactggatcaccacgacccactctttccatatttgaggaaaataaatgcaa |
165 |
Q |
| |
|
||||||||||||||||| |||||||||||| || |||||||||| |||||| ||||||||||| | ||| ||||||||||||||| ||||||||||| |
|
|
| T |
7459268 |
gctaaattttattttgtcatacaggctatccaaaacaataaattgtacatacttgatcaccacgatctactaattccatatttgaggagaataaatgcaa |
7459169 |
T |
|
| Q |
166 |
ccgagactaaggcctatgctactagaaccattcttttcttgcaagatgatggaactttgaagccattggccattgaactaagcaggccacaccctcaagg |
265 |
Q |
| |
|
| ||||| ||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
7459168 |
ctgagacaaagtcctatgcaactagaaccattcttttcttgcaaaatgatggaactttgaagccattggccattgaactaagtaggccacaccctcaagg |
7459069 |
T |
|
| Q |
266 |
tgatagttttggtcctgttagcaatgtttacttgcccgcaagtgaaggtgttgaagcttcaatttggctccttgccaaggcttacgtaattgtaaatgat |
365 |
Q |
| |
|
||||||||| ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||| |
|
|
| T |
7459068 |
tgatagtttaggtcctgttagtaatgtttacttgcctgcaagtgaaggtgttgaagcttcaatttggctccttgccaaggcttatgtcgttgtaaatgac |
7458969 |
T |
|
| Q |
366 |
tcatgttatcaccaacttgttagccattggtatgaatttcgtttatga----tatttaaacaatcaaa---taaattttatacatctatgggtaatttga |
458 |
Q |
| |
|
||||| || ||||||||||| ||||||||||||||||||| || || | ||| || ||||||||| ||||||| || ||||| | ||||||| | |
|
|
| T |
7458968 |
tcatgctaccaccaacttgtcagccattggtatgaatttcattaatcagtattatatatacaatcaaattctaaatttgatctatctaagcgtaatttca |
7458869 |
T |
|
| Q |
459 |
tgaaaatttatctacaatttgtgacaggttgaacactcatgctgtagttgagccattcgtcatagcaacaaataggcatctaagtgtggttcaccctatt |
558 |
Q |
| |
|
| | || ||||| |||| ||||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
7458868 |
tatatatgtatct-caatgtgtgacaggttgaacactcatgccgttgttgagccattcatcatagcaacaaataggcatcttagtgtggttcaccctatt |
7458770 |
T |
|
| Q |
559 |
cataaacttctgcttccacattatcgtgacacgatgaacataaatgcactagcacgaaatgtgttggtcaatgccgagggtattatcgagtcaactttct |
658 |
Q |
| |
|
||||||||| | |||||||| || |||||||| |||||||||||| | || ||||||| | | ||||||||||| | |||| |||| || | |||||||| |
|
|
| T |
7458769 |
cataaacttttacttccacactaccgtgacacaatgaacataaattccctcgcacgaactatcttggtcaatgcagggggtgttatggaattaactttct |
7458670 |
T |
|
| Q |
659 |
tgtggggaaagtatgctttggaaatgtcttctgtcgtttacaaggattgggttttcactgagcaaggcctacctaatgatctaatcaaaaggtaaccttg |
758 |
Q |
| |
|
|||||||| | |||||| | ||||||||| |||| ||||||||||||||| |||||| |||||||| || |||||||||||||||||||||||||||| |
|
|
| T |
7458669 |
tgtggggagattatgctgttgaaatgtctgctgttgtttacaaggattggaatttcaccgagcaaggacttcctaatgatctaatcaaaaggtaacctta |
7458570 |
T |
|
| Q |
759 |
caaaacattacatcttgactcagtcca-ttttttaaaaagatattgatct |
807 |
Q |
| |
|
|||||| ||||||||| || ||||| |||||||||||||||||||||| |
|
|
| T |
7458569 |
caaaaccgtacatcttgggtcggtccatttttttaaaaagatattgatct |
7458520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 310; E-Value: 1e-174
Query Start/End: Original strand, 212 - 807
Target Start/End: Complemental strand, 7471520 - 7470922
Alignment:
| Q |
212 |
tgatggaactttgaagccattggccattgaactaagcaggccacaccctcaaggtgatagttttggtcctgttagcaatgtttacttgcccgcaagtgaa |
311 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
7471520 |
tgatggaactttgaagccattggccattgaactaagtaggccacaccctcaaggtgatagttttggtcctgttagtaatgtttacttgcccgcaagtgaa |
7471421 |
T |
|
| Q |
312 |
ggtgttgaagcttcaatttggctccttgccaaggcttacgtaattgtaaatgattcatgttatcaccaacttgttagccattggtatgaatttcgtttat |
411 |
Q |
| |
|
|| || |||||||||||||||||||||||||||||||| || |||||||||| ||||| |||||||||||||| ||||||||||||||||||| || || |
|
|
| T |
7471420 |
ggcgtggaagcttcaatttggctccttgccaaggcttatgttgttgtaaatgactcatgctatcaccaacttgtcagccattggtatgaatttcattaat |
7471321 |
T |
|
| Q |
412 |
gatatttaaacaatcaaa---taaattttatacatctatgggtaatttgatgaaaatttatctacaatttgtgacaggttgaacactcatgctgtagttg |
508 |
Q |
| |
|
| |||| ||||||||| ||||||| || ||||||| ||||||| ||||| || ||||| |||| |||||||||||||||||||| || || |||| |
|
|
| T |
7471320 |
caggtttatacaatcaaacactaaatttgatctatctatgagtaatttcatgaacatatatct-caatgtgtgacaggttgaacactcacgccgttgttg |
7471222 |
T |
|
| Q |
509 |
agccattcgtcatagcaacaaataggcatctaagtgtggttcaccctattcataaacttctgcttccacattatcgtgacacgatgaacataaatgcact |
608 |
Q |
| |
|
|||||||| |||||||||||||||||||||| ||||||||||||| ||||||||||||| | |||||||| || ||||||| |||||| ||||| | || |
|
|
| T |
7471221 |
agccattcatcatagcaacaaataggcatcttagtgtggttcaccatattcataaacttttacttccacactactgtgacacaatgaacttaaattccct |
7471122 |
T |
|
| Q |
609 |
agcacgaaatgtgttggtcaatgccgagggtattatcgagtcaactttcttgtggggaaagtatgctttggaaatgtcttctgtcgtttacaaggattgg |
708 |
Q |
| |
|
||||||| | | ||||||||||| | |||| |||| || | |||||||||||||||| | |||||| | ||||||||| |||| ||||||||||||||| |
|
|
| T |
7471121 |
cgcacgaactatcttggtcaatgcagggggtgttatggaattaactttcttgtggggagattatgctgtcgaaatgtctgctgttgtttacaaggattgg |
7471022 |
T |
|
| Q |
709 |
gttttcactgagcaaggcctacctaatgatctaatcaaaaggtaaccttgcaaaacattacatcttgactcagtcca-ttttttaaaaagatattgatct |
807 |
Q |
| |
|
||||||||||||||| || |||||||||||||||||||||||||||| |||||| ||||||||| || ||||| |||||||||||||||||||||| |
|
|
| T |
7471021 |
aatttcactgagcaaggacttcctaatgatctaatcaaaaggtaaccttacaaaaccgtacatcttgggtcggtccatttttttaaaaagatattgatct |
7470922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 225; E-Value: 1e-123
Query Start/End: Original strand, 113 - 768
Target Start/End: Complemental strand, 6332033 - 6331378
Alignment:
| Q |
113 |
catactggatcaccacgacccactctttccatatttgaggaaaataaatgcaaccgagactaaggcctatgctactagaaccattcttttcttgcaagat |
212 |
Q |
| |
|
|||||| |||||||| |||||| | ||||||||||||||||||||||| |||| || || ||||| |||||||| |||||| | ||||||| ||| || |
|
|
| T |
6332033 |
catacttgatcaccatgacccaatatttccatatttgaggaaaataaactcaactgatacaaaggcatatgctacgagaaccttcattttcttacaaaat |
6331934 |
T |
|
| Q |
213 |
gatggaactttgaagccattggccattgaactaagcaggccacaccctcaaggtgatagttttggtcctgttagcaatgtttacttgcccgcaagtgaag |
312 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||| | |||||| ||||||| ||||||| |||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
6331933 |
gatggaactttgaagccattggccattgagctaagtaagccacatcctcaagaagatagttatggtcctgttagtaatgtttacttgcctgcaagtgaag |
6331834 |
T |
|
| Q |
313 |
gtgttgaagcttcaatttggctccttgccaaggcttacgtaattgtaaatgattcatgttatcaccaacttgttagccattggtatgaatttcgtttatg |
412 |
Q |
| |
|
||||||||||||| |||||||| |||||||| |||||||| |||||||||| || |||| ||| |||||||| ||||| ||||| ||||| ||| ||| |
|
|
| T |
6331833 |
gtgttgaagcttctatttggctacttgccaaagcttacgttgttgtaaatgactcctgttttcatcaacttgtcagccactggtacgaattatgttgatg |
6331734 |
T |
|
| Q |
413 |
a-tatttaaacaatcaaa-----taaattttatacatctatgggtaatttgatgaaaatttatctacaatttgtgacaggttgaacactcatgctgtagt |
506 |
Q |
| |
|
| | ||| | ||||||| | ||||| || ||||||| |||| || || || ||||||| || ||| |||||||||||||||||||||| || |
|
|
| T |
6331733 |
agtttttctagaatcaaacgtatttaatttcatcaatctatgagtaa-ttcattaa----tatctac-atgtgtaacaggttgaacactcatgctgttgt |
6331640 |
T |
|
| Q |
507 |
tgagccattcgtcatagcaacaaataggcatctaagtgtggttcaccctattcataaacttctgcttccacattatcgtgacacgatgaacataaatgca |
606 |
Q |
| |
|
|||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||| |||||||| |||||| |
|
|
| T |
6331639 |
tgagccattcatcatagcaacaaataggcatcttagtgtggttcaccctattcacaaacttctacttccacattatcgtgacacaatgaacattaatgca |
6331540 |
T |
|
| Q |
607 |
ctagcacgaaatgtgttggtcaatgccgagggtattatcgagtcaactttcttgtggggaaagtatgctttggaaatgtcttctgtcgtttacaaggatt |
706 |
Q |
| |
|
|| ||| | ||||| ||||| ||||| ||||||||||| || || || |||||| |||| ||| |||| ||| ||||| || | | || ||||||| |
|
|
| T |
6331539 |
cttgcaaggaatgtcttggttaatgcagagggtattatagaatcgacattcttgatgggacgttattctttagaattgtctgctctattatataaggatt |
6331440 |
T |
|
| Q |
707 |
gggttttcactgagcaaggcctacctaatgatctaatcaaaaggtaaccttgcaaaacatta |
768 |
Q |
| |
|
||||||||| ||||| || || ||||||||| || | ||||||||||||| ||||| |||| |
|
|
| T |
6331439 |
gggttttcatagagcacggtcttcctaatgatttactgaaaaggtaaccttacaaaatatta |
6331378 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 67 - 751
Target Start/End: Complemental strand, 6424276 - 6423598
Alignment:
| Q |
67 |
ctaaattttattttgtggaacaggctatccagaataataaattgttcatactggatcaccacgacccactctttccatatttgaggaaaataaatgcaac |
166 |
Q |
| |
|
||||||| |||||||| || |||||||||| || || ||||||| ||| || |||||| | ||| | | | ||||||||||||||||||||||||||| |
|
|
| T |
6424276 |
ctaaattatattttgttgattaggctatccaaaacaacaaattgtacatccttgatcactatgacatagtatatccatatttgaggaaaataaatgcaac |
6424177 |
T |
|
| Q |
167 |
cgagactaaggcctatgctactagaaccattcttttcttgcaagatgatggaactttgaagccattggccattgaactaagcaggccacaccctcaaggt |
266 |
Q |
| |
|
||||| |||||||||||| |||||||||| |||||||||||| ||||||||||||| |||||| |||| ||||| ||||| | |||||| ||| | | | |
|
|
| T |
6424176 |
tgagacaaaggcctatgctgctagaaccatccttttcttgcaaaatgatggaactttaaagccactggcgattgagctaagtaagccacatcctgacgat |
6424077 |
T |
|
| Q |
267 |
gatagttttggtcctgttagcaatgtttacttgcccgcaagtgaaggtgttgaagcttcaatttggctccttgccaaggcttacgtaattgtaaatgatt |
366 |
Q |
| |
|
||||||| ||| |||||||| | |||||||| || ||||||||||||||||||||||| |||||||| ||||| || ||||| ||| |||||||||| | |
|
|
| T |
6424076 |
gatagttatggacctgttagtgaagtttacttccctgcaagtgaaggtgttgaagcttctatttggctacttgctaaagcttatgtagttgtaaatgact |
6423977 |
T |
|
| Q |
367 |
catgttatcaccaacttgttagccattggtatgaatttcgtttatgatatttaaacaatcaaataaattttatacatctatgggtaatttgatgaaaatt |
466 |
Q |
| |
|
| || ||||||||||||||||||||||||||||||||||| |||| ||||| | || || ||| | ||||| |||| || || ||| || || |
|
|
| T |
6423976 |
cttgccatcaccaacttgttagccattggtatgaatttcgtaaatgagatttatagaaacagatataatttatctatctgtgagttgttt-attaa---- |
6423882 |
T |
|
| Q |
467 |
tatctacaatttgtgacaggttgaacactcatgctgtagttgagccattcgtcatagcaacaaataggcatctaagtgtggttcaccctattcataaact |
566 |
Q |
| |
|
| ||||| || | |||||||||||||||||| ||||| |||||||| ||| ||||||||||||| || || || ||| |||||||||| | || ||||| |
|
|
| T |
6423881 |
tgtctac-atgtatgacaggttgaacactcacgctgttgttgagccgttcatcatagcaacaaacagacaccttagtacggttcaccctgtccacaaact |
6423783 |
T |
|
| Q |
567 |
tctgcttccacattatcgtgacacgatgaacataaatgcactagcacgaaatgtgttggtcaatgccgagggtattatcgagtcaactttcttgtgggga |
666 |
Q |
| |
|
| | ||||| || || |||||||| |||||||||||| |||| ||||| ||||| | |||||||| ||||||||||| || ||||| |||||||||||| |
|
|
| T |
6423782 |
tttacttcctcactaccgtgacacaatgaacataaattcacttgcacggaatgtccttgtcaatgctgagggtattatagaatcaacattcttgtgggga |
6423683 |
T |
|
| Q |
667 |
aagtatgctttggaaatgtcttctgtcgtttacaaggattgggttttcactgagcaaggcctacctaatgatctaatcaaaaggt |
751 |
Q |
| |
|
|||||||||||||||||| |||| | || | |||||||||||||||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
6423682 |
ggatatgctttggaaatgtctgctgttgcatatagggattgggttttcactgagcaagggctacctaatgatctactcaaaaggt |
6423598 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 113 - 757
Target Start/End: Complemental strand, 6321528 - 6320882
Alignment:
| Q |
113 |
catactggatcaccacgacccactctttccatatttgaggaaaataaatgcaaccgagacta---aggcctatgctactagaaccattcttttcttgcaa |
209 |
Q |
| |
|
|||||| |||||||| ||| || | | ||||||| ||||||||||||||||| | || || | |||| |||||||||||||| || ||||||| ||| |
|
|
| T |
6321528 |
catacttgatcaccatgactcaatatatccatatctgaggaaaataaatgcagctgatacaacaaaggcatatgctactagaactatcattttcttacaa |
6321429 |
T |
|
| Q |
210 |
gatgatggaactttgaagccattggccattgaactaagcaggccacaccctcaaggtgatagttttggtcctgttagcaatgtttacttgcccgcaagtg |
309 |
Q |
| |
|
|||||||||||||||||||||| |||||||| ||||| || ||||| ||||| | |||||| |||||||||||||| ||||||||||||| |||| | |
|
|
| T |
6321428 |
aatgatggaactttgaagccattagccattgagctaagtagcccacatcctcaggctgatagctttggtcctgttagtgatgtttacttgcctgcaaagg |
6321329 |
T |
|
| Q |
310 |
aaggtgttgaagcttcaatttggctccttgccaaggcttacgtaattgtaaatgattcatgttatcaccaacttgttagccattggtatgaatttcgttt |
409 |
Q |
| |
|
||||||||||| |||| ||||||||||||||||||||||| || ||||||||||| || | | |||||||||||| ||||| ||||| |||| ||| |
|
|
| T |
6321328 |
aaggtgttgaatcttctatttggctccttgccaaggcttatgttattgtaaatgactcttctgttcaccaacttgtcagccactggtac-aattatgttg |
6321230 |
T |
|
| Q |
410 |
atga-tatttaaacaatcaaata-----aattttatacatctatgggtaatttgatgaaaatttatctacaatttgtgacaggttgaacactcatgctgt |
503 |
Q |
| |
|
|||| | |||| | ||||||| | ||||||||| ||||| | | ||| ||||| |||||||| | ||| ||||||||||||| || ||||| |
|
|
| T |
6321229 |
atgaatttttatagaatcaaacatatttaattttatatatctaagattgattc-atgaa----tatctaca-tgtgtaacaggttgaacacgcacgctgt |
6321136 |
T |
|
| Q |
504 |
agttgagccattcgtcatagcaacaaataggcatctaagtgtggttcaccctattcataaacttctgcttccacattatcgtgacacgatgaacataaat |
603 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||| |
|
|
| T |
6321135 |
tgttgagccattcatcatagcaactaataggcatcttagtgtggttcaccctattcacaaacttctgcttccacattatcgtgacacaatgaacattaat |
6321036 |
T |
|
| Q |
604 |
gcactagcacgaaatgtgttggtcaatgccgagggtattatcgagtcaactttcttgtggggaaagtatgctttggaaatgtcttctgtcgtttacaagg |
703 |
Q |
| |
|
||||| ||| | | ||| ||||| ||||| ||||||||||| || ||||| ||||| | ||||| || || | ||| |||||||||| | || |||| |
|
|
| T |
6321035 |
gcacttgcaaggagtgtcttggtaaatgcagagggtattatagaatcaacattcttattgggaagtcattctatagaactgtcttctgtattatataagg |
6320936 |
T |
|
| Q |
704 |
attgggttttcactgagcaaggcctacctaatgatctaatcaaaaggtaacctt |
757 |
Q |
| |
|
||||||||||| | || ||||| ||||||||||||||| | ||||||||||||| |
|
|
| T |
6320935 |
attgggttttcccagatcaaggactacctaatgatctacttaaaaggtaacctt |
6320882 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 171; E-Value: 2e-91
Query Start/End: Original strand, 72 - 815
Target Start/End: Complemental strand, 6370228 - 6369471
Alignment:
| Q |
72 |
ttttattttgtggaacaggctatccagaataataaattgttcatactggatcaccacgacccactctttccatatttgaggaaaataaatgcaaccgaga |
171 |
Q |
| |
|
|||| |||||| ||||||||||| | | |||| ||||| |||||| ||||||||||| || ||| |||||||||||||||| |||||| ||| || |
|
|
| T |
6370228 |
tttttttttgtctaacaggctatcgaagacaatagattgtacatacttgatcaccacgatgcaatctatccatatttgaggaaagtaaatgaaactgaag |
6370129 |
T |
|
| Q |
172 |
ctaaggcctatgctactagaaccattcttttcttgcaagatgatggaactttgaagccattggccattgaactaagcaggccacaccctcaaggtgatag |
271 |
Q |
| |
|
| ||| |||||||| |||||||||||||||| | ||||||||||||||||||| |||||||||||||| ||||| |||||| ||| | |||||||| |
|
|
| T |
6370128 |
caaagacctatgctgctagaaccattctttttgttaaagatgatggaactttgaatccattggccattgagctaagtttgccacatcctaatggtgatag |
6370029 |
T |
|
| Q |
272 |
ttttggtcctgttagcaatgtttacttgcccgcaagtgaaggtgttgaag---------cttcaatttggctccttgccaaggcttacgtaattgtaaat |
362 |
Q |
| |
|
||||||| ||||||| ||||||||| ||||| ||| | ||| || | ||| ||| ||||||||||||||| ||||| |||| |||||||| |
|
|
| T |
6370028 |
ttttggttctgttagtaatgtttacgtgcccccaaataaagatgctaaagatgatgaacctttaatttggctccttgcaaaggcgtacgctgttgtaaat |
6369929 |
T |
|
| Q |
363 |
gattcatgttatcaccaacttgttagccattggtatgaatttcgtttatgatatttaaacaatcaaataa---attttatacatctatgggta---attt |
456 |
Q |
| |
|
|| ||||||| ||||||||| || |||||||||| ||||||| | || || || | | ||| |||| | |||| || ||| ||| ||| |||| |
|
|
| T |
6369928 |
gactcatgttgtcaccaactcgtcagccattggtgagaatttcctagatcattttgatataataaaattatatatttgatttatcaatgagtagtaattt |
6369829 |
T |
|
| Q |
457 |
gatgaaaatttatctacaatttgtgacaggttgaacactcatgctgtagttgagccattcgtcatagcaacaaataggcatctaagtgtggttcacccta |
556 |
Q |
| |
|
||||| || ||| ||| | ||| |||||||||| || |||||||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||| |
|
|
| T |
6369828 |
tatgaatatatatttact-tgtgtcacaggttgaaaacacatgctgttgttgagccattcgtcatagcaacaaataggcatcttagtgtgcttcacccta |
6369730 |
T |
|
| Q |
557 |
ttcataaacttctgcttccacattatcgtgacacgatgaacataaatgcactagcacgaaatgtgttggtcaatgccgagggtattatcgagtcaacttt |
656 |
Q |
| |
|
||||||||||| | ||||||| ||||||| |||||||| ||||||||||| | |||||||| | ||| ||||||| | ||||||| | ||||| || || |
|
|
| T |
6369729 |
ttcataaacttttagttccacactatcgtggcacgatgaccataaatgcacgatcacgaaatatcttgatcaatgcagggggtattgtagagtcgacatt |
6369630 |
T |
|
| Q |
657 |
cttgtggggaaagtatgctttggaaatgtcttctgtcgtttacaaggattgggttttcactgagcaaggcctacctaatgatctaatcaaaaggtaacct |
756 |
Q |
| |
|
|||| | ||| || | |||||||||| |||| ||||||||||||||||||||| |||| |||| ||||||| |||||||| || |||||| | |
|
|
| T |
6369629 |
tttgtttgaaaaatactgtatggaaatgtcagctgttgtttacaaggattgggttttcgctgaagaaggactacctactgatctaaaaaataggtaattt |
6369530 |
T |
|
| Q |
757 |
tgcaaaacattacatcttgactcagtccattttttaaaaagatattgatctcaaatata |
815 |
Q |
| |
|
|||||||||| |||| || ||||||||||| ||| ||||||||| |||| ||||||| |
|
|
| T |
6369529 |
agcaaaacattgcatcatggttcagtccatttattagaaagatattaatctaaaatata |
6369471 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 159; E-Value: 3e-84
Query Start/End: Original strand, 136 - 774
Target Start/End: Complemental strand, 6410299 - 6409666
Alignment:
| Q |
136 |
tctttccatatttgaggaaaataaatgcaaccgagactaaggcctatgctactagaaccattcttttcttgcaagatgatggaactttgaagccattggc |
235 |
Q |
| |
|
|||| |||||||||||||||||||||||||| | | ||||||||||| | | ||| |||| | ||||||||||||||||||||||||||| | | |
|
|
| T |
6410299 |
tcttaccatatttgaggaaaataaatgcaactggcgcaaaggcctatgcctcaacgacccttctctctttgcaagatgatggaactttgaagccaatatc |
6410200 |
T |
|
| Q |
236 |
cattgaactaagcaggccacaccctcaaggtgatagttttggtcctgttagcaatgtttacttgcccgcaagtgaaggtgttgaagcttcaatttggctc |
335 |
Q |
| |
|
|||||||||| |||||| ||| | |||||| || ||| | || ||| |||| ||| |||| |||||||||||| ||||||||||||| | |
|
|
| T |
6410199 |
cattgaactacatgtgccacatcctgatggtgatggtattgttactactag------ttacacgcctgcaactgaaggtgttgatgcttcaatttggcgc |
6410106 |
T |
|
| Q |
336 |
cttgccaaggcttacgtaattgtaaatgattcatgttatcaccaacttgttagccattggtatgaatttcgtttatgatatttaaacaatcaaata--aa |
433 |
Q |
| |
|
|||||||||||||||| |||||||||| | || ||||| |||||| | ||||||||||||||||||| || || || |||| ||||||||| | || |
|
|
| T |
6410105 |
cttgccaaggcttacgctgttgtaaatgacgcctgctatcatcaacttatcagccattggtatgaatttcattaatcatttttatacaatcaaacactaa |
6410006 |
T |
|
| Q |
434 |
ttttatacatctatgggtaatttgatgaaaatttatctacaatttgtgacaggttgaacactcatgctgtagttgagccattcgtcatagcaacaaatag |
533 |
Q |
| |
|
| || | || | || ||||||| ||||| || |||||||| | |||||||||||| ||||||||||| |||||||||||| |||||||||||||||| |
|
|
| T |
6410005 |
tatttgatatatctgagtaattttatgaatatatatctaca-tgtgtgacaggttgcacactcatgcttctgttgagccattcatcatagcaacaaatag |
6409907 |
T |
|
| Q |
534 |
gcatctaagtgtggttcaccctattcataaacttctgcttccacattatcgtgacacgatgaacataaatgcactagcacgaaatgtgttggtcaatgcc |
633 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| | |||||||| |||||| |||| |||||||||||||| || ||| |||| ||| |||| || |
|
|
| T |
6409906 |
gcatcttagtgtggttcaccctattcataaactattacttccacactatcgtaacacaatgaacataaatgccaatgcgcgagatgtcttgatcaaagca |
6409807 |
T |
|
| Q |
634 |
gagggtattatcgagtcaactttcttgtggggaaagtatgctttggaaatgtcttctgtcgtttacaaggattgggttttcactgagcaaggcctaccta |
733 |
Q |
| |
|
| ||||||||| |||||||| | ||||| |||| ||| | ||||| ||||||||| ||||||||||||||||||||| | || |||| ||||||| |
|
|
| T |
6409806 |
gggggtattatagagtcaacatacttgtttggaagttattcaatggaattgtcttctgatgtttacaaggattgggttttcccggatcaagcactaccta |
6409707 |
T |
|
| Q |
734 |
atgatctaatcaaaaggtaaccttgcaaaacattacatctt |
774 |
Q |
| |
|
|||||||||||||||||||| ||| ||||| |||| ||||| |
|
|
| T |
6409706 |
atgatctaatcaaaaggtaagcttacaaaatattaaatctt |
6409666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 152; E-Value: 5e-80
Query Start/End: Original strand, 303 - 817
Target Start/End: Complemental strand, 6390934 - 6390419
Alignment:
| Q |
303 |
gcaagtgaaggtgttgaagcttcaatttggctccttgccaaggcttacgtaattgtaaatgattcatgttatcaccaacttgttagccattggtatgaat |
402 |
Q |
| |
|
||||||||||||||||| ||||||||||||| ||||||||||||||||| |||| ||||| |||| |||||||||||| | ||||| |||||||||| |
|
|
| T |
6390934 |
gcaagtgaaggtgttgatgcttcaatttggcaccttgccaaggcttacgctgttgtgaatgacgcatgctatcaccaacttatcagccactggtatgaat |
6390835 |
T |
|
| Q |
403 |
ttcgtttatgatatttaa-acaatcaaata--aattttatacatctatgggtaatttgatgaaaatttatctacaatttgtgacaggttgaacactcatg |
499 |
Q |
| |
|
||| || || || ||| ||||||||| | ||| || | || | | ||||||| ||||| || |||||||| | |||||||||||||||||||||| |
|
|
| T |
6390834 |
ttcattaatcattttttctacaatcaaacactaatatttgatatatccgagtaattttatgaatatatatctaca-tgtgtgacaggttgaacactcatg |
6390736 |
T |
|
| Q |
500 |
ctgtagttgagccattcgtcatagcaacaaataggcatctaagtgtggttcaccctattcataaacttctgcttccacattatcgtgacacgatgaacat |
599 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||| |||||| |||| |||||||| |
|
|
| T |
6390735 |
ctgttgttgagccattcatcatagcaacaaataggcatcttagtgtggttcaccctattcataaacttttacttccacactatcgtaacacaatgaacat |
6390636 |
T |
|
| Q |
600 |
aaatgcactagcacgaaatgtgttggtcaatgccgagggtattatcgagtcaactttcttgtggggaaagtatgctttggaaatgtcttctgtcgtttac |
699 |
Q |
| |
|
|||||| || ||| || ||| |||| || | ||||||||| |||||||| | ||||| |||| ||| | ||||| ||||||||| |||||| |
|
|
| T |
6390635 |
aaatgccaatgcgcgagataccttgatcaaagcagggggtattatagagtcaacatacttgtttggaagttattcaatggaattgtcttctgaagtttac |
6390536 |
T |
|
| Q |
700 |
aaggattgggttttcactgagcaaggcctacctaatgatctaatcaaaaggtaaccttgcaaaacattacatc-ttgactcagtccattttttaaaaaga |
798 |
Q |
| |
|
||||||||||||||| || ||||| ||||||||||||||||||||||||| ||||| |||| |||||||| | | || |||||| |||||| ||||| |
|
|
| T |
6390535 |
aaggattgggttttccaagatcaaggactacctaatgatctaatcaaaaggtgaccttacaaattattacatcgtcgtct-agtcca-tttttagaaaga |
6390438 |
T |
|
| Q |
799 |
tattgatctcaaatataat |
817 |
Q |
| |
|
|||||||||||| ||||| |
|
|
| T |
6390437 |
cattgatctcaaaaataat |
6390419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 124; E-Value: 3e-63
Query Start/End: Original strand, 88 - 403
Target Start/End: Complemental strand, 6274674 - 6274359
Alignment:
| Q |
88 |
aggctatccagaataataaattgttcatactggatcaccacgacccactctttccatatttgaggaaaataaatgcaaccgagactaaggcctatgctac |
187 |
Q |
| |
|
|||||||||| | || ||||||| |||||| ||| |||||||| | | | ||||||| ||||||||||||||||| | || || ||||| |||||||| |
|
|
| T |
6274674 |
aggctatccaaaccaacaaattgtacatacttgattaccacgactcgttatatccatatctgaggaaaataaatgcagctgatacaaaggcatatgctac |
6274575 |
T |
|
| Q |
188 |
tagaaccattcttttcttgcaagatgatggaactttgaagccattggccattgaactaagcaggccacaccctcaaggtgatagttttggtcctgttagc |
287 |
Q |
| |
|
|||||| | |||||||| ||| ||||||||||||||||||| ||||||||||| ||||| || ||||| ||||| | |||||| |||||||||||||| |
|
|
| T |
6274574 |
gagaaccttccttttcttacaaaatgatggaactttgaagccgttggccattgagctaagtagcccacatcctcaggctgatagctttggtcctgttagt |
6274475 |
T |
|
| Q |
288 |
aatgtttacttgcccgcaagtgaaggtgttgaagcttcaatttggctccttgccaaggcttacgtaattgtaaatgattcatgttatcaccaacttgtta |
387 |
Q |
| |
|
|| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||| || || || |||||||||| | | |
|
|
| T |
6274474 |
gatatttacttgcctgcaagtgaaggtgttgaagcttctatttggctccttgccaaggcatacgttgttgtaaacgactcttgccatcaccaactcatca |
6274375 |
T |
|
| Q |
388 |
gccattggtatgaatt |
403 |
Q |
| |
|
||||||||||| |||| |
|
|
| T |
6274374 |
gccattggtataaatt |
6274359 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 478 - 768
Target Start/End: Complemental strand, 6288539 - 6288249
Alignment:
| Q |
478 |
tgtgacaggttgaacactcatgctgtagttgagccattcgtcatagcaacaaataggcatctaagtgtggttcaccctattcataaacttctgcttccac |
577 |
Q |
| |
|
|||||||||||||| |||||||| || |||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||| ||| | ||||| | |
|
|
| T |
6288539 |
tgtgacaggttgaatactcatgcagttgttgagccattcatcatagcaacaaataggcatcttagtgtggttcatcctattcataagcttttacttccgc |
6288440 |
T |
|
| Q |
578 |
attatcgtgacacgatgaacataaatgcactagcacgaaatgtgttggtcaatgccgagggtattatcgagtcaactttcttgtggggaaagtatgcttt |
677 |
Q |
| |
|
| ||||||||||| |||||||| |||||||| ||| | ||||| ||||||||||| ||||| |||| ||| || |||||| ||||| ||| |||| |
|
|
| T |
6288439 |
actatcgtgacacaatgaacattaatgcacttgcaaggaatgttttggtcaatgcaaagggtgttattgagaagacgttcttgatgggaagttattcttt |
6288340 |
T |
|
| Q |
678 |
ggaaatgtcttctgtcgtttacaaggattgggttttcactgagcaaggcctacctaatgatctaatcaaaaggtaaccttgcaaaacatta |
768 |
Q |
| |
|
||| ||||| | || | || || || ||||||||||| || ||||| | |||||||||||| | ||||||||||||| |||||||||| |
|
|
| T |
6288339 |
agaattgtctgcggtaatatataaagactgggttttcaccgatcaaggtttgcctaatgatctacttaaaaggtaaccttacaaaacatta |
6288249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 480 - 768
Target Start/End: Complemental strand, 6274287 - 6273999
Alignment:
| Q |
480 |
tgacaggttgaacactcatgctgtagttgagccattcgtcatagcaacaaataggcatctaagtgtggttcaccctattcataaacttctgcttccacat |
579 |
Q |
| |
|
||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||| ||||||||||| ||||||||||| ||| | ||||| || |
|
|
| T |
6274287 |
tgacaggttaaacactcatgctgttgttgagccattcatcatagcaacaaataggcatcttagtgtggttcatcctattcataagcttttacttccgcac |
6274188 |
T |
|
| Q |
580 |
tatcgtgacacgatgaacataaatgcactagcacgaaatgtgttggtcaatgccgagggtattatcgagtcaactttcttgtggggaaagtatgctttgg |
679 |
Q |
| |
|
||||||||||| |||||||| |||||||| ||| | ||||| ||||||||||| |||||| |||| ||| || |||||| ||||| ||| || | | |
|
|
| T |
6274187 |
tatcgtgacacaatgaacattaatgcacttgcaaggaatgttttggtcaatgcagagggtgttattgagaagacgttcttgatgggaagttattctctag |
6274088 |
T |
|
| Q |
680 |
aaatgtcttctgtcgtttacaaggattgggttttcactgagcaaggcctacctaatgatctaatcaaaaggtaaccttgcaaaacatta |
768 |
Q |
| |
|
| ||||| |||| | || ||||||||| ||| | |||||||| | |||||||||||| ||||||||||||||| ||||||||| |
|
|
| T |
6274087 |
agttgtctgctgtattatataaggattggaattttaaagagcaaggtttgcctaatgatctactcaaaaggtaaccttaaaaaacatta |
6273999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 180 - 397
Target Start/End: Complemental strand, 6288828 - 6288611
Alignment:
| Q |
180 |
tatgctactagaaccattcttttcttgcaagatgatggaactttgaagccattggccattgaactaagcaggccacaccctcaaggtgatagttttggtc |
279 |
Q |
| |
|
||||||||||||||||| ||||||| ||| ||||||||||||| |||||||| ||||| || ||||| || || | || |||||||| | |||| || |
|
|
| T |
6288828 |
tatgctactagaaccatcattttcttacaaaatgatggaacttttaagccattagccatcgagctaagtagcccgaatccaaaaggtgatcgctttgatc |
6288729 |
T |
|
| Q |
280 |
ctgttagcaatgtttacttgcccgcaagtgaaggtgttgaagcttcaatttggctccttgccaaggcttacgtaattgtaaatgattcatgttatcacca |
379 |
Q |
| |
|
|| | || || | |||||||| |||||||||||||||||| |||| |||||||| ||||||||| ||| || ||||||||||| ||||| |||||||| |
|
|
| T |
6288728 |
ctatcagtgatatctacttgcctgcaagtgaaggtgttgaatcttctatttggctacttgccaagaattatgtgattgtaaatgactcatgctatcacca |
6288629 |
T |
|
| Q |
380 |
acttgttagccattggta |
397 |
Q |
| |
|
|||| | ||||| ||||| |
|
|
| T |
6288628 |
acttatcagccactggta |
6288611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 174 - 397
Target Start/End: Complemental strand, 6263400 - 6263177
Alignment:
| Q |
174 |
aaggcctatgctactagaaccattcttttcttgcaagatgatggaactttgaagccattggccattgaactaagcaggccacaccctcaaggtgatagtt |
273 |
Q |
| |
|
|||||||||||| | |||||| | ||||||||| || |||||||||||| ||||| ||||||||||| |||| ||||| |||||||| ||| | |
|
|
| T |
6263400 |
aaggcctatgcttcaagaaccgtccttttcttgaaaagtgatggaactttaaagcctttggccattgagttaagtcttccacatcctcaaggagatcaat |
6263301 |
T |
|
| Q |
274 |
ttggtcctgttagcaatgtttacttgcccgcaagtgaaggtgttgaagcttcaatttggctccttgccaaggcttacgtaattgtaaatgattcatgtta |
373 |
Q |
| |
|
||||| |||||| || || |||||||| |||| |||||||||||||||| | ||||||| |||||||||||||| || || |||||||| ||||| | |
|
|
| T |
6263300 |
ttggtgttgttagtaacgtctacttgcctgcaattgaaggtgttgaagctacggtttggctacttgccaaggcttatgttatagtaaatgactcatgctt |
6263201 |
T |
|
| Q |
374 |
tcaccaacttgttagccattggta |
397 |
Q |
| |
|
|||||||||||| ||||| ||||| |
|
|
| T |
6263200 |
tcaccaacttgtcagccactggta |
6263177 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 483 - 567
Target Start/End: Complemental strand, 6456845 - 6456761
Alignment:
| Q |
483 |
caggttgaacactcatgctgtagttgagccattcgtcatagcaacaaataggcatctaagtgtggttcaccctattcataaactt |
567 |
Q |
| |
|
||||||||| |||||||| || ||||| |||||| |||||||||||||||||||||||||||| ||||||| ||| |||||||| |
|
|
| T |
6456845 |
caggttgaatactcatgcagttgttgaaccattcatcatagcaacaaataggcatctaagtgttcttcacccaattaataaactt |
6456761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 483 - 753
Target Start/End: Complemental strand, 6262967 - 6262697
Alignment:
| Q |
483 |
caggttgaacactcatgctgtagttgagccattcgtcatagcaacaaataggcatctaagtgtggttcaccctattcataaacttctgcttccacattat |
582 |
Q |
| |
|
|||||| || |||||||| || ||||| ||||| || ||||||||||| || || || |||||| |||| |||||| ||||||| | | |||||||||| |
|
|
| T |
6262967 |
caggttaaatactcatgcagttgttgaaccatttgttatagcaacaaacagacaacttagtgtgcttcatcctatttataaactattacatccacattat |
6262868 |
T |
|
| Q |
583 |
cgtgacacgatgaacataaatgcactagcacgaaatgtgttggtcaatgccgagggtattatcgagtcaactttcttgtggggaaagtatgctttggaaa |
682 |
Q |
| |
|
|| || || ||||| ||||||||||| || || || |||||||| || |||||||| || || |||||||||||| ||||||| |||| | |
|
|
| T |
6262867 |
cgcgatactatgaatataaatgcacttgctagatcatccttagtcaatgcagatggtattattgaaaagacattcttgtggggagggtatgctatggaga |
6262768 |
T |
|
| Q |
683 |
tgtcttctgtcgtttacaaggattgggttttcactgagcaaggcctacctaatgatctaatcaaaaggtaa |
753 |
Q |
| |
|
| ||||| ||||| |||||||||||||| || || |||| ||| ||| |||||| |||||||||||| |
|
|
| T |
6262767 |
tatcttcaaaagtttataaggattgggtttttacagaccaagccctccctgctgatcttatcaaaaggtaa |
6262697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 483 - 563
Target Start/End: Complemental strand, 6450583 - 6450503
Alignment:
| Q |
483 |
caggttgaacactcatgctgtagttgagccattcgtcatagcaacaaataggcatctaagtgtggttcaccctattcataa |
563 |
Q |
| |
|
||||||||| |||||||| || | || |||||| |||||||||||||||| ||||||||||| ||||||| ||| |||| |
|
|
| T |
6450583 |
caggttgaatactcatgcagtgatggaaccattcatcatagcaacaaatagacatctaagtgtacttcacccgattaataa |
6450503 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 403
Target Start/End: Complemental strand, 6450942 - 6450743
Alignment:
| Q |
204 |
ttgcaagatgatggaactttgaagccattggccattgaactaagcaggccacaccctcaaggtgatagttttggtcctgttagcaatgtttacttgcccg |
303 |
Q |
| |
|
|||||||||||||| |||||||||||||| ||||| ||| ||||| ||||||| | | || | | |||| ||| ||||| || | |||||| | |
|
|
| T |
6450942 |
ttgcaagatgatgggactttgaagccattagccatcgaattaagcttgccacactcaaatggggtccaatatggtgctgaaagcaaagtattcttgcctg |
6450843 |
T |
|
| Q |
304 |
caagtgaaggtgttgaagcttcaatttggctccttgccaaggcttacgtaattgtaaatgattcatgttatcaccaacttgttagccattggtatgaatt |
403 |
Q |
| |
|
|| ||||||||||||| | |||||||| | | || |||||| | |||||||||||||| ||||| ||||| ||||| | ||||||||||||||||| |
|
|
| T |
6450842 |
cacatgaaggtgttgaaagtacaatttggatgttggcaaaggctcatgtaattgtaaatgactcatgctatcatcaactcatgagccattggtatgaatt |
6450743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 245
Target Start/End: Complemental strand, 6391027 - 6390986
Alignment:
| Q |
204 |
ttgcaagatgatggaactttgaagccattggccattgaacta |
245 |
Q |
| |
|
||||||||||||||||||||||||||| | ||||||||||| |
|
|
| T |
6391027 |
ttgcaagatgatggaactttgaagccaatatccattgaacta |
6390986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 43; Significance: 0.000000000000006; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 506 - 608
Target Start/End: Original strand, 36745380 - 36745482
Alignment:
| Q |
506 |
ttgagccattcgtcatagcaacaaataggcatctaagtgtggttcaccctattcataaacttctgcttccacattatcgtgacacgatgaacataaatgc |
605 |
Q |
| |
|
||||||||||| ||||||| ||||||||| ||| ||||||||||| ||||||||||| ||||| | || || ||||||||||| ||||| || ||||| |
|
|
| T |
36745380 |
ttgagccattcatcatagctacaaataggtgtctcagtgtggttcatcctattcataagcttctacagcctcactatcgtgacacaatgaatatcaatgc |
36745479 |
T |
|
| Q |
606 |
act |
608 |
Q |
| |
|
||| |
|
|
| T |
36745480 |
act |
36745482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 247
Target Start/End: Original strand, 36745142 - 36745209
Alignment:
| Q |
180 |
tatgctactagaaccattcttttcttgcaagatgatggaactttgaagccattggccattgaactaag |
247 |
Q |
| |
|
||||| ||||| || || || |||||| |||||||||| ||||| |||||||||||||| |||||||| |
|
|
| T |
36745142 |
tatgccactaggacaatcctattcttgaaagatgatgggactttaaagccattggccatcgaactaag |
36745209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 41; Significance: 0.00000000000009; HSPs: 3)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 484 - 608
Target Start/End: Original strand, 42689003 - 42689127
Alignment:
| Q |
484 |
aggttgaacactcatgctgtagttgagccattcgtcatagcaacaaataggcatctaagtgtggttcaccctattcataaacttctgcttccacattatc |
583 |
Q |
| |
|
|||||||| || ||||| ||||||||||||||||| || ||||||||| | || || |||||| ||||||| ||| |||||||| | ||| ||||||| |
|
|
| T |
42689003 |
aggttgaatacccatgcagtagttgagccattcgttattgcaacaaatcgacagcttagtgtgattcacccaatttataaacttttatctcctcattatc |
42689102 |
T |
|
| Q |
584 |
gtgacacgatgaacataaatgcact |
608 |
Q |
| |
|
| ||||| |||||||| || ||||| |
|
|
| T |
42689103 |
gggacaccatgaacatcaacgcact |
42689127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 666 - 753
Target Start/End: Original strand, 42689185 - 42689272
Alignment:
| Q |
666 |
aaagtatgctttggaaatgtcttctgtcgtttacaaggattgggttttcactgagcaaggcctacctaatgatctaatcaaaaggtaa |
753 |
Q |
| |
|
|||||||||| ||||||||||||| | ||||||||| ||||||||||| |||| |||| ||| || |||||| ||||| |||||| |
|
|
| T |
42689185 |
aaagtatgctgtggaaatgtcttcagcggtttacaagaattgggttttccctgatcaagcccttccagctgatcttatcaagaggtaa |
42689272 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 309 - 398
Target Start/End: Complemental strand, 42693070 - 42692981
Alignment:
| Q |
309 |
gaaggtgttgaagcttcaatttggctccttgccaaggcttacgtaattgtaaatgattcatgttatcaccaacttgttagccattggtat |
398 |
Q |
| |
|
|||||||||||| | | |||||| | || || |||||||| ||| | || |||||||| |||||||| |||||||| |||||||||||| |
|
|
| T |
42693070 |
gaaggtgttgaaagtactatttggttactggctaaggcttatgtagtagtgaatgattcctgttatcatcaacttgtcagccattggtat |
42692981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 484 - 563
Target Start/End: Original strand, 9605566 - 9605645
Alignment:
| Q |
484 |
aggttgaacactcatgctgtagttgagccattcgtcatagcaacaaataggcatctaagtgtggttcaccctattcataa |
563 |
Q |
| |
|
|||||||| |||||||| || |||||||||||| ||||||||||||| || ||||| ||||| ||||||||||| |||| |
|
|
| T |
9605566 |
aggttgaatactcatgcagtggttgagccattcatcatagcaacaaacagacatcttagtgttcttcaccctattaataa |
9605645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 238
Target Start/End: Original strand, 9605182 - 9605240
Alignment:
| Q |
180 |
tatgctactagaaccattcttttcttgcaagatgatggaactttgaagccattggccat |
238 |
Q |
| |
|
||||| ||||| || || |||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
9605182 |
tatgcaactaggacaatccttttcttaaaagatgatggaactttgaagccagtggccat |
9605240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 483 - 604
Target Start/End: Original strand, 36925630 - 36925751
Alignment:
| Q |
483 |
caggttgaacactcatgctgtagttgagccattcgtcatagcaacaaataggcatctaagtgtggttcaccctattcataaacttctgcttccacattat |
582 |
Q |
| |
|
||||||| | |||||||| || || ||||||||| ||||||| ||||||||| ||| ||||| |||||||||||||||| || | | ||| || | | |
|
|
| T |
36925630 |
caggttgcatactcatgccgtcgtagagccattcatcatagcttcaaataggcgtcttagtgtacttcaccctattcataagctattacatcctcacttt |
36925729 |
T |
|
| Q |
583 |
cgtgacacgatgaacataaatg |
604 |
Q |
| |
|
|||||||| ||||| ||||||| |
|
|
| T |
36925730 |
cgtgacaccatgaatataaatg |
36925751 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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