View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5176_low_1 (Length: 799)

Name: NF5176_low_1
Description: NF5176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5176_low_1
NF5176_low_1
[»] chr2 (16 HSPs)
chr2 (1-700)||(6915171-6915870)
chr2 (449-547)||(10543505-10543603)
chr2 (449-547)||(10471307-10471405)
chr2 (449-547)||(28106207-28106305)
chr2 (467-547)||(27966389-27966469)
chr2 (449-547)||(10859023-10859121)
chr2 (560-616)||(10492777-10492833)
chr2 (559-611)||(28105350-28105402)
chr2 (553-616)||(10463585-10463648)
chr2 (553-600)||(10507349-10507396)
chr2 (565-616)||(10860707-10860758)
chr2 (554-616)||(10474161-10474223)
chr2 (560-616)||(7476566-7476622)
chr2 (565-616)||(10848803-10848854)
chr2 (468-530)||(9081351-9081413)
chr2 (559-616)||(7478731-7478788)
[»] chr7 (8 HSPs)
chr7 (88-192)||(15040241-15040345)
chr7 (11-84)||(15040064-15040137)
chr7 (449-547)||(15044800-15044898)
chr7 (362-452)||(15043971-15044061)
chr7 (549-620)||(15045570-15045641)
chr7 (197-252)||(15041840-15041895)
chr7 (302-364)||(15043792-15043854)
chr7 (647-700)||(15047553-15047606)
[»] chr3 (1 HSPs)
chr3 (706-779)||(34239998-34240071)
[»] chr8 (3 HSPs)
chr8 (39-108)||(43895529-43895598)
chr8 (39-108)||(44305953-44306022)
chr8 (564-615)||(44307022-44307073)
[»] chr5 (2 HSPs)
chr5 (168-246)||(35856854-35856932)
chr5 (449-547)||(33601026-33601124)


Alignment Details
Target: chr2 (Bit Score: 660; Significance: 0; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 660; E-Value: 0
Query Start/End: Original strand, 1 - 700
Target Start/End: Complemental strand, 6915870 - 6915171
Alignment:
Q  1 aatgattgtttgcccactctctgggtccaagctaacacggaaagtaggatcctctctttggaagcggttcaaagcttttgaaaatttccctccagaatct 100  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6915870 aatgattgtttgcccactctctgggtccaagctaacacgaaaagtaggatcctctctttggaagcggttcaaagcttttgaaaatttccctccagaatct 6915771  T
Q  101 tttgagactggctgtacagctaatgacatcacgggctcaggaacattcatagaagtcattgtgtatttaaccgacccatcagtaaatgtatcgccggatg 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6915770 tttgagactggctgtacagctaatgacatcacgggctcaggaacattcatagaagtcattgtgtatttaaccgacccatcagtaaatgtatcgctggatg 6915671  T
Q  201 cacaatcaacaccaaatacagcaactatttggccagcatgggcctcttcaatgtcattcatctcattagaatgcatctcaactaagcgaggaaccttaat 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||    
T  6915670 cacaatcaacaccaaatacagcaactatttggccagcatgggcctcttcaatgtcgttcatctcattagaatgcatctgaactaagcgaggaaccttaat 6915571  T
Q  301 tttctttccagtgctaacattaacaataaaatcacccttccgaatgacgccctcataaactcttagatatgttaactgaccaaacttcctttgctccaac 400  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  6915570 tttctttccagtgctaacattaacaataaaatcacccttccgaatgacaccctcataaactcttagatatgttaactgaccaaacttcgtttgctccaac 6915471  T
Q  401 ttgaaagccaatgctacaaggggcccatcgggacttccagtcagctgaaccttctcctcattcttggattggtcaagagcataattactaacttcaatcg 500  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6915470 ttgaaagccaatgctacaagaggcccatcgggacttccagtcagctgaaccttctcctcattcttggattggtcaagagcataattactaacttcaatcg 6915371  T
Q  501 gacaaggcaaataagtaactacaccatccagaagtggttgtacccccgtgtttttgacagcactacccatgaataccggtataaatttccgtgctatggt 600  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6915370 gacaaggcaaataactaactacaccatccagaagtggttgtacccccgtgtttttgacagcactacccatgaataccggtataaatttccgtgctatggt 6915271  T
Q  601 agccctacgaattgctccctcaaggtcagcagctgaaatgttctcatcatcgctaagaaacgcttcagcaagtacatcatctacctctgacacaggttct 700  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  6915270 agccctacgaattgctccctcaaggtcagcagctgaaatgttctcatcatcactaagaaacgcttcagcaagtacatcatctacctctgacacagtttct 6915171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 449 - 547
Target Start/End: Original strand, 10543505 - 10543603
Alignment:
Q  449 accttctcctcattcttggattggtcaagagcataattactaacttcaatcggacaaggcaaataagtaactacaccatccagaagtggttgtaccccc 547  Q
    ||||| |||||||||||||||||| | ||||||||||||||| ||||| | ||||| ||||||||| ||| ||||||||||| |||| |||||| ||||    
T  10543505 accttttcctcattcttggattggacgagagcataattactagcttcagttggacacggcaaataattaagtacaccatccaaaagtagttgtaacccc 10543603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 449 - 547
Target Start/End: Original strand, 10471307 - 10471405
Alignment:
Q  449 accttctcctcattcttggattggtcaagagcataattactaacttcaatcggacaaggcaaataagtaactacaccatccagaagtggttgtaccccc 547  Q
    ||||| ||||||||||| |||||| | ||||||||||||||| ||||| | ||||| ||||||||| ||| ||||||||||| |||| |||||| ||||    
T  10471307 accttttcctcattcttagattggacgagagcataattactagcttcagttggacacggcaaataattaagtacaccatccaaaagtagttgtagcccc 10471405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 449 - 547
Target Start/End: Complemental strand, 28106305 - 28106207
Alignment:
Q  449 accttctcctcattcttggattggtcaagagcataattactaacttcaatcggacaaggcaaataagtaactacaccatccagaagtggttgtaccccc 547  Q
    ||||| ||| ||| ||| ||||||||||||| |||||||||| ||||||| ||||| ||||||||| ||| ||||||||||| |||| |||||| ||||    
T  28106305 accttttccccatgcttagattggtcaagagtataattactagcttcaattggacacggcaaataattaattacaccatccaaaagtagttgtagcccc 28106207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 467 - 547
Target Start/End: Original strand, 27966389 - 27966469
Alignment:
Q  467 gattggtcaagagcataattactaacttcaatcggacaaggcaaataagtaactacaccatccagaagtggttgtaccccc 547  Q
    ||||||||||||| |||||||||| ||||||| ||||| ||||||||| ||| ||||||||||| |||| |||||| ||||    
T  27966389 gattggtcaagagtataattactagcttcaattggacacggcaaataattaattacaccatccaaaagtagttgtagcccc 27966469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 449 - 547
Target Start/End: Original strand, 10859023 - 10859121
Alignment:
Q  449 accttctcctcattcttggattggtcaagagcataattactaacttcaatcggacaaggcaaataagtaactacaccatccagaagtggttgtaccccc 547  Q
    ||||| ||| ||||||| |||| ||| |||| |||||||||||||||| | ||||| ||||||||| ||  ||||||||||| |||| |||||| ||||    
T  10859023 accttttccccattcttagatttgtcgagagaataattactaacttcagttggacagggcaaataattagttacaccatccaaaagtagttgtagcccc 10859121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 560 - 616
Target Start/End: Original strand, 10492777 - 10492833
Alignment:
Q  560 gcactacccatgaataccggtataaatttccgtgctatggtagccctacgaattgct 616  Q
    |||||||||||||| ||||||| ||||||  |||||||||| |||||||||||||||    
T  10492777 gcactacccatgaaaaccggtacaaatttatgtgctatggttgccctacgaattgct 10492833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 559 - 611
Target Start/End: Complemental strand, 28105402 - 28105350
Alignment:
Q  559 agcactacccatgaataccggtataaatttccgtgctatggtagccctacgaa 611  Q
    |||| ||||||||||||| |||||||| |||||||||||||| ||||||||||    
T  28105402 agcattacccatgaatactggtataaacttccgtgctatggtggccctacgaa 28105350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 553 - 616
Target Start/End: Original strand, 10463585 - 10463648
Alignment:
Q  553 tttgacagcactacccatgaataccggtataaatttccgtgctatggtagccctacgaattgct 616  Q
    ||||| ||||||||||||||| |  |||||||||||||||||||| || || ||||||||||||    
T  10463585 tttgaaagcactacccatgaaaaatggtataaatttccgtgctatcgtggctctacgaattgct 10463648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 553 - 600
Target Start/End: Original strand, 10507349 - 10507396
Alignment:
Q  553 tttgacagcactacccatgaataccggtataaatttccgtgctatggt 600  Q
    ||||| |||||| ||||||||||| |||||||||||||||||||||||    
T  10507349 tttgaaagcactgcccatgaatacgggtataaatttccgtgctatggt 10507396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 565 - 616
Target Start/End: Original strand, 10860707 - 10860758
Alignment:
Q  565 acccatgaataccggtataaatttccgtgctatggtagccctacgaattgct 616  Q
    |||||||||||| |||||||||||||||||||||||  ||||||||| ||||    
T  10860707 acccatgaatactggtataaatttccgtgctatggtgaccctacgaactgct 10860758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 554 - 616
Target Start/End: Original strand, 10474161 - 10474223
Alignment:
Q  554 ttgacagcactacccatgaataccggtataaatttccgtgctatggtagccctacgaattgct 616  Q
    |||| |||||| ||||||||||  |||||||| |||||||||||||| |||||||||| ||||    
T  10474161 ttgaaagcactgcccatgaatattggtataaacttccgtgctatggtggccctacgaactgct 10474223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 560 - 616
Target Start/End: Complemental strand, 7476622 - 7476566
Alignment:
Q  560 gcactacccatgaataccggtataaatttccgtgctatggtagccctacgaattgct 616  Q
    |||||||||||||| ||||||| ||||||| ||||||| || |||||| ||||||||    
T  7476622 gcactacccatgaaaaccggtacaaatttctgtgctatagttgccctatgaattgct 7476566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 565 - 616
Target Start/End: Original strand, 10848803 - 10848854
Alignment:
Q  565 acccatgaataccggtataaatttccgtgctatggtagccctacgaattgct 616  Q
    |||||||||||| |||||||||||  |||||||||| |||||||||| ||||    
T  10848803 acccatgaatactggtataaatttgtgtgctatggtggccctacgaactgct 10848854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 468 - 530
Target Start/End: Complemental strand, 9081413 - 9081351
Alignment:
Q  468 attggtcaagagcataattactaacttcaatcggacaaggcaaataagtaactacaccatcca 530  Q
    ||||||| || |||||||||||  ||||||| ||||| ||||||||| ||| |||||||||||    
T  9081413 attggtcgagcgcataattacttgcttcaattggacacggcaaataattaagtacaccatcca 9081351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 559 - 616
Target Start/End: Complemental strand, 7478788 - 7478731
Alignment:
Q  559 agcactacccatgaataccggtataaatttccgtgctatggtagccctacgaattgct 616  Q
    |||||| |||||||| |||||||||||||| |||||| |||| |||||| ||| ||||    
T  7478788 agcactgcccatgaagaccggtataaatttgcgtgctctggttgccctaagaactgct 7478731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 81; Significance: 1e-37; HSPs: 8)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 88 - 192
Target Start/End: Original strand, 15040241 - 15040345
Alignment:
Q  88 ccctccagaatcttttgagactggctgtacagctaatgacatcacgggctcaggaacattcatagaagtcattgtgtatttaaccgacccatcagtaaat 187  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| ||||||||||| |||||||| ||||||||||||||     
T  15040241 ccctccagaatcttttgagactggctgtacagctaatgacatcacaggctcaggaacactcattgaagtcattgtatatttaacagacccatcagtaaaa 15040340  T
Q  188 gtatc 192  Q
    |||||    
T  15040341 gtatc 15040345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 15040064 - 15040137
Alignment:
Q  11 tgcccactctctgggtccaagctaacacggaaagtaggatcctctctttggaagcggttcaaagcttttgaaaa 84  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15040064 tgcccactctctgggtccaagccaacacggaaagtaggatcctctctttggaagcggttcaaagcttttgaaaa 15040137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 449 - 547
Target Start/End: Original strand, 15044800 - 15044898
Alignment:
Q  449 accttctcctcattcttggattggtcaagagcataattactaacttcaatcggacaaggcaaataagtaactacaccatccagaagtggttgtaccccc 547  Q
    ||||||||||| || || ||||||||||| ||||||||| |||||||||| ||||| ||||||||| ||| ||||||||||||||||||||||| ||||    
T  15044800 accttctcctccttattagattggtcaagggcataattattaacttcaattggacatggcaaataactaagtacaccatccagaagtggttgtatcccc 15044898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 362 - 452
Target Start/End: Original strand, 15043971 - 15044061
Alignment:
Q  362 cttagatatgttaactgaccaaacttcctttgctccaacttgaaagccaatgctacaaggggcccatcgggacttccagtcagctgaacct 452  Q
    |||| |||||||| |||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||| | |||| ||||| |||||    
T  15043971 cttaaatatgttagctgaccaaacttactttcctccaacttgaaagccaatgctacaaggggcccatcaggattaccaggcagctcaacct 15044061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 549 - 620
Target Start/End: Original strand, 15045570 - 15045641
Alignment:
Q  549 tgtttttgacagcactacccatgaataccggtataaatttccgtgctatggtagccctacgaattgctccct 620  Q
    ||||||||| ||||||||||||||||||||||||||||||||| || | ||||||||||||||| |||||||    
T  15045570 tgtttttgaaagcactacccatgaataccggtataaatttccgcgccacggtagccctacgaatggctccct 15045641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 197 - 252
Target Start/End: Original strand, 15041840 - 15041895
Alignment:
Q  197 gatgcacaatcaacaccaaatacagcaactatttggccagcatgggcctcttcaat 252  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  15041840 gatgcacaatcaacaccaaatacagcaactatttggccagcatgagcctcatcaat 15041895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 302 - 364
Target Start/End: Original strand, 15043792 - 15043854
Alignment:
Q  302 ttctttccagtgctaacattaacaataaaatcacccttccgaatgacgccctcataaactctt 364  Q
    ||||| |||||| ||||||||| ||| ||||||||||||||||||||||||||||||| ||||    
T  15043792 ttcttgccagtgttaacattaataatgaaatcacccttccgaatgacgccctcataaattctt 15043854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 647 - 700
Target Start/End: Original strand, 15047553 - 15047606
Alignment:
Q  647 tcatcgctaagaaacgcttcagcaagtacatcatctacctctgacacaggttct 700  Q
    ||||| |||||||||||||| ||||||| |||||| ||||||||||||| ||||    
T  15047553 tcatcactaagaaacgcttccgcaagtatatcatcaacctctgacacagtttct 15047606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 74; Significance: 2e-33; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 706 - 779
Target Start/End: Complemental strand, 34240071 - 34239998
Alignment:
Q  706 ttcactgtcaaagctcttaagatatcaacttcaacaaccagaagacgtaggttgagttgctcagcctcggcttc 779  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34240071 ttcactgtcaaagctcttaagatatcaacttcaacaaccagaagacgtaggttgagttgctcagcctcggcttc 34239998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000005; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 108
Target Start/End: Original strand, 43895529 - 43895598
Alignment:
Q  39 ggaaagtaggatcctctctttggaagcggttcaaagcttttgaaaatttccctccagaatcttttgagac 108  Q
    ||||||||||||||| |||||| || |  ||||||||  ||||||||| |||||||||||||||||||||    
T  43895529 ggaaagtaggatcctttctttgaaaaccattcaaagcagttgaaaattgccctccagaatcttttgagac 43895598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 108
Target Start/End: Original strand, 44305953 - 44306022
Alignment:
Q  39 ggaaagtaggatcctctctttggaagcggttcaaagcttttgaaaatttccctccagaatcttttgagac 108  Q
    ||||||||||||||| |||||| || |  ||||||||  ||||||||| |||||||||||||||||||||    
T  44305953 ggaaagtaggatcctttctttgaaaaccattcaaagcacttgaaaattgccctccagaatcttttgagac 44306022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 564 - 615
Target Start/End: Original strand, 44307022 - 44307073
Alignment:
Q  564 tacccatgaataccggtataaatttccgtgctatggtagccctacgaattgc 615  Q
    |||||||||| |  |||| |||||||||||||||||| ||||||||||||||    
T  44307022 tacccatgaaaattggtacaaatttccgtgctatggttgccctacgaattgc 44307073  T

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Target: chr5 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 35856932 - 35856854
Alignment:
Q  168 taaccgacccatcagtaaatgtatcgccggatgcacaatcaacaccaaatacagcaactatttggccagcatgggcctc 246  Q
    |||| ||||||||||||||||| || || | ||||||||||||| || ||||| |||| ||||| |||||||| |||||    
T  35856932 taacagacccatcagtaaatgtttctcctggtgcacaatcaacatcacatacaacaacaatttgtccagcatgagcctc 35856854  T

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Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 449 - 547
Target Start/End: Original strand, 33601026 - 33601124
Alignment:
Q  449 accttctcctcattcttggattggtcaagagcataattactaacttcaatcggacaaggcaaataagtaactacaccatccagaagtggttgtaccccc 547  Q
    ||||| ||||||||||| ||||||   |||||||||||| |  ||||| | ||||| ||||||| | |||  |||||||||| ||||||||||| ||||    
T  33601026 accttttcctcattcttagattggatgagagcataattagttgcttcagttggacacggcaaattattaagcacaccatccaaaagtggttgtagcccc 33601124  T

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