View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5176_low_60 (Length: 240)
Name: NF5176_low_60
Description: NF5176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5176_low_60 |
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Alignment Details
Target: chr8 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 1517598 - 1517483
Alignment:
| Q |
1 |
tgtgaggaaaataggttaaatttacatttcaagatagtttagttatcgatgagctaaaacatcaaatggaccattatcgttggcattattgaagcacttt |
100 |
Q |
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| T |
1517598 |
tgtgaggcaaataggttaaatttacatttcaagatagtttagttatcgatgagctaaaacatcaaatggaccattatggttggcattattgaagcacttt |
1517499 |
T |
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| Q |
101 |
gttccaatgtcatgat |
116 |
Q |
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|||||||||||||||| |
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| T |
1517498 |
gttccaatgtcatgat |
1517483 |
T |
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