View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5176_low_80 (Length: 205)

Name: NF5176_low_80
Description: NF5176
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5176_low_80
NF5176_low_80
[»] chr8 (30 HSPs)
chr8 (14-187)||(41856882-41857055)
chr8 (14-187)||(18440203-18440376)
chr8 (14-187)||(42603587-42603757)
chr8 (14-187)||(40702493-40702667)
chr8 (14-187)||(44942989-44943162)
chr8 (32-187)||(19242088-19242243)
chr8 (32-187)||(19315272-19315427)
chr8 (14-146)||(26486847-26486979)
chr8 (104-187)||(26452458-26452541)
chr8 (31-187)||(15032252-15032405)
chr8 (104-187)||(40414743-40414826)
chr8 (104-187)||(43693270-43693353)
chr8 (104-184)||(41275530-41275610)
chr8 (94-185)||(31171804-31171895)
chr8 (104-187)||(41363789-41363872)
chr8 (104-187)||(42168958-42169041)
chr8 (104-186)||(38033923-38034005)
chr8 (104-187)||(33799549-33799632)
chr8 (104-185)||(40415392-40415473)
chr8 (31-186)||(485186-485338)
chr8 (104-184)||(24861479-24861559)
chr8 (104-187)||(2417048-2417131)
chr8 (104-187)||(34615086-34615169)
chr8 (104-187)||(43638675-43638758)
chr8 (104-186)||(28706140-28706222)
chr8 (94-187)||(3589254-3589347)
chr8 (32-93)||(16575904-16575965)
chr8 (104-170)||(22549232-22549295)
chr8 (14-63)||(42603931-42603981)
chr8 (16-63)||(28167320-28167368)
[»] chr4 (65 HSPs)
chr4 (14-187)||(957366-957539)
chr4 (14-187)||(22437034-22437207)
chr4 (14-187)||(6282234-6282407)
chr4 (14-187)||(21169574-21169747)
chr4 (14-187)||(34529707-34529880)
chr4 (14-187)||(44560091-44560264)
chr4 (14-187)||(49791847-49792020)
chr4 (32-187)||(36776448-36776603)
chr4 (14-187)||(2773132-2773305)
chr4 (14-187)||(34153197-34153370)
chr4 (18-187)||(47657270-47657439)
chr4 (14-186)||(49817555-49817727)
chr4 (32-187)||(43889428-43889583)
chr4 (18-186)||(49423672-49423841)
chr4 (32-187)||(4785351-4785506)
chr4 (104-187)||(21711653-21711736)
chr4 (104-187)||(37866530-37866613)
chr4 (31-187)||(21017108-21017261)
chr4 (104-187)||(242417-242500)
chr4 (96-187)||(26591678-26591769)
chr4 (104-187)||(33163545-33163628)
chr4 (104-187)||(39589052-39589135)
chr4 (104-186)||(1226283-1226365)
chr4 (32-186)||(42886390-42886544)
chr4 (31-187)||(40353704-40353857)
chr4 (104-185)||(49064104-49064185)
chr4 (31-187)||(55796866-55797019)
chr4 (104-184)||(14330695-14330775)
chr4 (32-187)||(32937834-32937986)
chr4 (104-187)||(1042872-1042955)
chr4 (32-185)||(24606877-24607027)
chr4 (104-187)||(27759450-27759533)
chr4 (104-187)||(51428193-51428276)
chr4 (104-186)||(31824630-31824712)
chr4 (104-185)||(25762723-25762804)
chr4 (38-187)||(11288418-11288562)
chr4 (38-187)||(17211389-17211536)
chr4 (104-187)||(6177316-6177399)
chr4 (101-184)||(20778867-20778950)
chr4 (104-187)||(41794563-41794646)
chr4 (104-187)||(51027768-51027851)
chr4 (104-187)||(56139033-56139116)
chr4 (104-187)||(9489801-9489884)
chr4 (104-187)||(45939648-45939731)
chr4 (104-187)||(49094868-49094951)
chr4 (104-186)||(20901669-20901751)
chr4 (38-187)||(18412718-18412864)
chr4 (38-106)||(49064563-49064631)
chr4 (104-187)||(46816526-46816607)
chr4 (94-185)||(13850874-13850965)
chr4 (104-187)||(28082361-28082444)
chr4 (94-185)||(31324299-31324390)
chr4 (94-186)||(3393428-3393520)
chr4 (94-185)||(13866388-13866479)
chr4 (14-79)||(26591585-26591652)
chr4 (14-63)||(22437381-22437431)
chr4 (38-68)||(34152892-34152922)
chr4 (38-72)||(36776126-36776160)
chr4 (14-78)||(42886992-42887058)
chr4 (38-72)||(44559893-44559927)
chr4 (38-72)||(49791543-49791577)
chr4 (38-79)||(49423364-49423405)
chr4 (94-187)||(49817188-49817281)
chr4 (135-187)||(10312395-10312447)
chr4 (38-114)||(14330250-14330326)
[»] chr2 (40 HSPs)
chr2 (14-187)||(35491762-35491935)
chr2 (14-187)||(41499000-41499173)
chr2 (18-186)||(40677285-40677453)
chr2 (18-187)||(6976963-6977132)
chr2 (14-187)||(34521590-34521763)
chr2 (32-187)||(37312419-37312574)
chr2 (32-188)||(2919289-2919445)
chr2 (33-187)||(27130434-27130588)
chr2 (14-187)||(19471540-19471713)
chr2 (14-187)||(10364543-10364716)
chr2 (15-164)||(43491600-43491749)
chr2 (31-187)||(29067856-29068009)
chr2 (32-186)||(17796034-17796185)
chr2 (104-187)||(42120139-42120222)
chr2 (104-178)||(16581960-16582034)
chr2 (104-184)||(5420599-5420679)
chr2 (104-187)||(3941864-3941947)
chr2 (39-187)||(33404142-33404286)
chr2 (31-187)||(3936990-3937143)
chr2 (31-187)||(43982983-43983136)
chr2 (104-184)||(12968298-12968378)
chr2 (31-186)||(17424917-17425069)
chr2 (104-187)||(10360195-10360278)
chr2 (104-187)||(22493398-22493481)
chr2 (104-187)||(42241095-42241178)
chr2 (31-184)||(22001964-22002114)
chr2 (104-186)||(39394019-39394101)
chr2 (32-187)||(29111285-29111437)
chr2 (124-188)||(32734773-32734837)
chr2 (95-166)||(16253603-16253674)
chr2 (94-185)||(27650413-27650504)
chr2 (124-187)||(29906709-29906772)
chr2 (104-166)||(18393497-18393559)
chr2 (94-182)||(15891633-15891721)
chr2 (38-72)||(2918972-2919006)
chr2 (38-72)||(6977406-6977440)
chr2 (38-72)||(17538550-17538584)
chr2 (14-63)||(19471316-19471366)
chr2 (14-63)||(43491924-43491974)
chr2 (16-63)||(6977312-6977360)
[»] chr7 (43 HSPs)
chr7 (14-187)||(30354724-30354897)
chr7 (14-186)||(21187208-21187380)
chr7 (14-187)||(41048908-41049081)
chr7 (14-187)||(43351009-43351181)
chr7 (14-187)||(48315089-48315262)
chr7 (18-186)||(42735388-42735556)
chr7 (15-187)||(36393734-36393906)
chr7 (14-187)||(46862103-46862276)
chr7 (14-187)||(48270773-48270946)
chr7 (32-187)||(15337832-15337987)
chr7 (14-187)||(21650649-21650821)
chr7 (32-184)||(28114320-28114472)
chr7 (42-186)||(21614700-21614841)
chr7 (104-187)||(2206036-2206119)
chr7 (104-187)||(39477239-39477322)
chr7 (104-187)||(41217739-41217822)
chr7 (104-187)||(34140990-34141073)
chr7 (31-188)||(13920430-13920584)
chr7 (31-187)||(9367049-9367202)
chr7 (124-187)||(17183337-17183400)
chr7 (104-187)||(18237689-18237772)
chr7 (104-187)||(20564884-20564967)
chr7 (104-187)||(40588674-40588757)
chr7 (104-187)||(48220743-48220826)
chr7 (104-186)||(30360643-30360724)
chr7 (94-186)||(1642576-1642668)
chr7 (124-187)||(17839448-17839511)
chr7 (104-166)||(45363251-45363313)
chr7 (105-187)||(47269023-47269105)
chr7 (96-184)||(2356417-2356505)
chr7 (26-185)||(10523196-10523352)
chr7 (143-187)||(28979060-28979104)
chr7 (94-181)||(11824824-11824911)
chr7 (38-72)||(21186904-21186938)
chr7 (104-166)||(26601777-26601839)
chr7 (32-80)||(20877979-20878027)
chr7 (38-164)||(17320137-17320260)
chr7 (104-187)||(20378702-20378785)
chr7 (38-72)||(36393430-36393464)
chr7 (42-79)||(21651111-21651148)
chr7 (19-94)||(34353346-34353423)
chr7 (16-63)||(10224541-10224589)
chr7 (101-185)||(28066382-28066466)
[»] chr3 (67 HSPs)
chr3 (14-187)||(55206793-55206966)
chr3 (14-186)||(2428625-2428797)
chr3 (14-187)||(41804039-41804212)
chr3 (14-187)||(51013187-51013360)
chr3 (14-181)||(52569318-52569485)
chr3 (14-187)||(41578043-41578216)
chr3 (14-187)||(46346521-46346694)
chr3 (32-186)||(46414261-46414415)
chr3 (32-187)||(42323316-42323471)
chr3 (32-186)||(30192676-30192830)
chr3 (14-187)||(7246231-7246404)
chr3 (14-187)||(51015414-51015587)
chr3 (32-187)||(34472003-34472158)
chr3 (32-187)||(45100392-45100547)
chr3 (32-187)||(14631582-14631737)
chr3 (14-187)||(43570047-43570220)
chr3 (38-187)||(34647200-34647349)
chr3 (32-187)||(7954341-7954496)
chr3 (32-187)||(37281589-37281744)
chr3 (35-187)||(49273536-49273688)
chr3 (32-186)||(36721316-36721470)
chr3 (69-187)||(10053239-10053356)
chr3 (104-187)||(13895869-13895952)
chr3 (93-187)||(47759879-47759973)
chr3 (104-184)||(19453228-19453308)
chr3 (105-187)||(48087552-48087634)
chr3 (69-187)||(50458655-50458773)
chr3 (31-187)||(2268423-2268576)
chr3 (31-187)||(2646805-2646958)
chr3 (31-187)||(4004016-4004169)
chr3 (104-187)||(24702271-24702354)
chr3 (104-187)||(34693289-34693372)
chr3 (104-187)||(44927600-44927683)
chr3 (14-96)||(55268769-55268851)
chr3 (94-187)||(774327-774420)
chr3 (39-187)||(3494966-3495111)
chr3 (31-187)||(36135144-36135297)
chr3 (104-187)||(39416947-39417030)
chr3 (104-187)||(49610626-49610709)
chr3 (104-187)||(51695605-51695688)
chr3 (101-187)||(18440882-18440968)
chr3 (101-187)||(19485956-19486042)
chr3 (31-187)||(34049864-34050017)
chr3 (31-187)||(49139983-49140136)
chr3 (31-187)||(50997525-50997678)
chr3 (31-187)||(54390579-54390732)
chr3 (105-184)||(25576592-25576671)
chr3 (104-187)||(42382408-42382491)
chr3 (104-187)||(42383188-42383271)
chr3 (104-187)||(42950019-42950102)
chr3 (104-187)||(46403140-46403223)
chr3 (104-187)||(49218735-49218818)
chr3 (104-186)||(47065825-47065907)
chr3 (32-162)||(33449082-33449208)
chr3 (38-187)||(6464280-6464427)
chr3 (38-182)||(6754346-6754488)
chr3 (32-187)||(8633292-8633441)
chr3 (38-117)||(37282039-37282118)
chr3 (105-187)||(43477194-43477276)
chr3 (104-184)||(53826695-53826775)
chr3 (38-117)||(36720942-36721021)
chr3 (135-184)||(27187088-27187137)
chr3 (104-187)||(44835486-44835569)
chr3 (38-77)||(14632020-14632059)
chr3 (38-72)||(43570490-43570524)
chr3 (38-72)||(45100080-45100114)
chr3 (38-79)||(27187558-27187599)
[»] chr1 (59 HSPs)
chr1 (14-187)||(38046344-38046517)
chr1 (14-187)||(49926290-49926463)
chr1 (14-187)||(6435895-6436068)
chr1 (32-187)||(14173686-14173841)
chr1 (14-187)||(13973047-13973220)
chr1 (32-187)||(36909684-36909839)
chr1 (32-187)||(49396827-49396982)
chr1 (32-186)||(23342765-23342919)
chr1 (33-187)||(24270292-24270446)
chr1 (14-187)||(37778202-37778375)
chr1 (14-187)||(41780816-41780989)
chr1 (32-187)||(35185094-35185249)
chr1 (32-187)||(17686289-17686444)
chr1 (32-187)||(35586859-35587012)
chr1 (32-187)||(40533214-40533369)
chr1 (32-187)||(21484574-21484726)
chr1 (107-184)||(29707544-29707621)
chr1 (32-187)||(18170148-18170303)
chr1 (104-187)||(39856906-39856989)
chr1 (104-185)||(35576464-35576545)
chr1 (38-187)||(17372850-17372996)
chr1 (32-187)||(17697169-17697321)
chr1 (104-187)||(27035318-27035401)
chr1 (104-187)||(39224197-39224280)
chr1 (38-186)||(13283829-13283973)
chr1 (31-187)||(19160440-19160593)
chr1 (104-187)||(12791273-12791356)
chr1 (38-186)||(24363738-24363882)
chr1 (104-187)||(29436096-29436179)
chr1 (124-187)||(35526197-35526260)
chr1 (104-187)||(44597824-44597907)
chr1 (104-187)||(45689242-45689325)
chr1 (104-187)||(46180280-46180363)
chr1 (104-187)||(49427510-49427593)
chr1 (104-187)||(50068259-50068342)
chr1 (104-187)||(51269925-51270008)
chr1 (105-187)||(42571777-42571859)
chr1 (101-186)||(3658597-3658682)
chr1 (104-184)||(27486690-27486770)
chr1 (104-187)||(13635297-13635380)
chr1 (104-187)||(44337319-44337402)
chr1 (104-187)||(48215321-48215404)
chr1 (15-98)||(35526108-35526191)
chr1 (104-187)||(48568404-48568487)
chr1 (104-182)||(47488037-47488115)
chr1 (104-187)||(29762221-29762304)
chr1 (104-186)||(41874884-41874966)
chr1 (94-186)||(5765330-5765422)
chr1 (31-79)||(22527735-22527783)
chr1 (104-187)||(49262988-49263071)
chr1 (94-184)||(16532080-16532170)
chr1 (141-187)||(18842562-18842608)
chr1 (104-187)||(30309832-30309909)
chr1 (16-65)||(41781165-41781215)
chr1 (38-72)||(49397210-49397244)
chr1 (38-79)||(13973483-13973524)
chr1 (38-99)||(18170606-18170667)
chr1 (150-187)||(49598921-49598958)
chr1 (16-63)||(24270051-24270099)
[»] chr5 (37 HSPs)
chr5 (32-186)||(35565394-35565548)
chr5 (14-187)||(4723986-4724159)
chr5 (14-187)||(1400214-1400387)
chr5 (14-187)||(18308382-18308555)
chr5 (32-184)||(1694914-1695066)
chr5 (69-187)||(36350281-36350399)
chr5 (69-186)||(6793353-6793470)
chr5 (31-187)||(27661309-27661462)
chr5 (31-187)||(7161-7314)
chr5 (104-188)||(40009649-40009733)
chr5 (104-187)||(7082343-7082426)
chr5 (31-185)||(8576073-8576224)
chr5 (31-187)||(28881113-28881266)
chr5 (104-187)||(8538076-8538159)
chr5 (104-180)||(3601470-3601546)
chr5 (135-187)||(35927470-35927522)
chr5 (104-187)||(541637-541720)
chr5 (104-187)||(11346831-11346914)
chr5 (104-187)||(19036676-19036759)
chr5 (104-187)||(19400485-19400568)
chr5 (124-187)||(1971487-1971550)
chr5 (104-187)||(11027899-11027982)
chr5 (104-187)||(30709720-30709803)
chr5 (104-187)||(38854280-38854363)
chr5 (38-117)||(7082792-7082871)
chr5 (31-176)||(22283704-22283846)
chr5 (101-187)||(33370776-33370862)
chr5 (38-99)||(1171725-1171786)
chr5 (94-166)||(17195351-17195423)
chr5 (104-159)||(3458940-3458995)
chr5 (38-79)||(4723682-4723723)
chr5 (94-182)||(18920861-18920949)
chr5 (101-163)||(12742818-12742880)
chr5 (38-72)||(25498647-25498681)
chr5 (38-72)||(34683533-34683567)
chr5 (16-63)||(20196549-20196597)
chr5 (38-94)||(33371169-33371225)
[»] chr6 (27 HSPs)
chr6 (18-187)||(13402660-13402829)
chr6 (18-186)||(32027541-32027709)
chr6 (32-186)||(30257506-30257660)
chr6 (14-187)||(12396903-12397076)
chr6 (18-186)||(32037600-32037768)
chr6 (14-152)||(35021146-35021284)
chr6 (32-181)||(34802823-34802972)
chr6 (32-187)||(801292-801444)
chr6 (104-187)||(35058734-35058817)
chr6 (34-187)||(14115164-14115313)
chr6 (104-187)||(29108267-29108350)
chr6 (31-187)||(27640307-27640460)
chr6 (104-187)||(6205611-6205694)
chr6 (104-187)||(11692578-11692661)
chr6 (104-184)||(3765786-3765867)
chr6 (104-187)||(29066680-29066763)
chr6 (104-187)||(29075693-29075776)
chr6 (104-187)||(29110665-29110748)
chr6 (32-98)||(4495119-4495185)
chr6 (31-176)||(24021026-24021168)
chr6 (38-117)||(30257133-30257212)
chr6 (38-176)||(2192535-2192670)
chr6 (132-187)||(22305923-22305978)
chr6 (14-79)||(12397250-12397317)
chr6 (38-67)||(32027233-32027262)
chr6 (38-67)||(32037292-32037321)
chr6 (101-185)||(17465331-17465415)
[»] scaffold0192 (1 HSPs)
scaffold0192 (104-186)||(17916-17998)
[»] scaffold0004 (1 HSPs)
scaffold0004 (32-163)||(64098-64226)
[»] scaffold0176 (1 HSPs)
scaffold0176 (104-187)||(1915-1998)
[»] scaffold0031 (1 HSPs)
scaffold0031 (31-176)||(85462-85604)
[»] scaffold0589 (1 HSPs)
scaffold0589 (104-187)||(2392-2475)
[»] scaffold0268 (2 HSPs)
scaffold0268 (31-79)||(14698-14746)
scaffold0268 (132-176)||(14604-14648)


Alignment Details
Target: chr8 (Bit Score: 130; Significance: 1e-67; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 130; E-Value: 1e-67
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 41856882 - 41857055
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||||    
T  41856882 gaatattggagacctgccgtttggcaagtttgaattaccccattcaaaggaagacaattgttgtagctaaaaggtgcattcatttcgtacctaatgacga 41856981  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| |  ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  41856982 tcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 41857055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 18440203 - 18440376
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||||||| | |||||| || ||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||    
T  18440203 gaatattggagacctgccgtttggaaaatttgaattaccccattcaaaggaagataattgttgtagctggaaggtgcattcattccgtacctaatgacga 18440302  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| |   |||||| |||||||||||||||| |||| |||||||||||||||||| |||||||||||||||    
T  18440303 tcttctcgcgtaatcaaacttttgatgatatcttcagtttatctcagcaacgtcaccctcatatcgatccactg 18440376  T

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Target: chr8; HSP #3
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 42603757 - 42603587
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    |||||||||||||||   |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  42603757 gaatattggagacct---gtttggcaagtttgaattaccccattcaaaggaagacaattgttgtagctaaaaggtgcattcattccgtacctaatgacga 42603661  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||| | |  ||||||| ||||||||||||| ||  |||||| ||||||||||||||| |||||||||||||||    
T  42603660 tcttttggcggaatcaaacttttgatgatatattcggttgatttcagcaacgtcacccgcatatcgatccactg 42603587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 40702667 - 40702493
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatga-cg 112  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||| ||    
T  40702667 gaatattggagacctgccgtttggcaagtttgaattaccccattcaaaggaagacaattgttgtagctaaaatgtgcattcattccgtacctaatgaccg 40702568  T
Q  113 atcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||||| | |  ||||||| ||||||||||||| || |||||||||||||||||||| || |||||||||||||||    
T  40702567 atcttttggcggaatcaaacttttgatgatatattcagttgatctcagcaacgtcatccgcatatcgatccactg 40702493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 44942989 - 44943162
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    |||||||||||||||   ||||||||||||||||||| | |||||||| ||||| |||| ||||||||  ||||||||| |||||||||||||||||| |    
T  44942989 gaatattggagacctgtcgtttggcaagtttgaattatctcattcaaacgaagacaattgttgtagctggaaggtgcatacattccgtacctaatgacaa 44943088  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| |  ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  44943089 tcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 44943162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 32 - 187
Target Start/End: Original strand, 19242088 - 19242243
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    |||||||||||||||| ||||||||||| || |||| |||| |||||| |  ||||||||||||||| |||||||||||| ||||||| || |||||||     
T  19242088 gtttggcaagtttgaactaccccattcagagaaagacaattgttgtagttggaaggtgcattcattcggtacctaatgacaatcttctcgtagaatcaaa 19242187  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||    
T  19242188 cttttgatgatatcttcagttgatcttagcaacgtcacccgcatatcgatccactg 19242243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 32 - 187
Target Start/End: Original strand, 19315272 - 19315427
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    |||||||||||||||| ||||||||||| || |||| |||| |||||| |  ||||||||||||||| |||||||||||| ||||||| || |||||||     
T  19315272 gtttggcaagtttgaactaccccattcagagaaagacaattgttgtagttggaaggtgcattcattcggtacctaatgacaatcttctcgtagaatcaaa 19315371  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| ||||||||| ||||||||||||| |||||||||||||||    
T  19315372 cttttgatgatatcttcagttgatcttagcaacgtcacccgcatatcgatccactg 19315427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 26486979 - 26486847
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||||||| | ||||| ||||||||||||||| |||||||||||||| |||| |||||||||| || ||||||||||||||||||||||||||    
T  26486979 gaatattggagacctgccgtttgacaagtttgaattacctcattcaaaggaagacaattgttgtagctaagagatgcattcattccgtacctaatgacga 26486880  T
Q  114 tcttctagttgaatcaagcttttgatgatatct 146  Q
    ||||||    |||||||||| ||||||||||||    
T  26486879 tcttctgacggaatcaagctgttgatgatatct 26486847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 26452541 - 26452458
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||||||||||||||||||  |||||||| | ||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  26452541 ctaatgacgatcttctagcggaatcaagttgttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 26452458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 31 - 187
Target Start/End: Original strand, 15032252 - 15032405
Alignment:
Q  31 tgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaa 130  Q
    |||||| |||||||||||||||||||||||||||||| || | |||||| |  ||  ||||  | | || || |||||||||||||||| |  |||||||    
T  15032252 tgtttgacaagtttgaattaccccattcaaaggaagacaaatgttgtagttggaa--tgcac-cttaccctaactaatgacgatcttctggcggaatcaa 15032348  T
Q  131 gcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
     |||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||    
T  15032349 acttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactg 15032405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 40414826 - 40414743
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| || |||||||||| ||||||||||||| ||||||||||||||||||||||| |||||| ||| ||||    
T  40414826 ctaatgacgatcttctggtggaatcaagctgttgatgatatcttcagttgatctcagcaacgtcacccgcatatcaatcaactg 40414743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 43693353 - 43693270
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  |||||||| | ||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  43693353 ctaatgacgatcttctggaggaatcaagttgttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 43693270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 104 - 184
Target Start/End: Complemental strand, 41275610 - 41275530
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatcca 184  Q
    |||||||||||||||| |  |||||||| | ||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  41275610 ctaatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatcca 41275530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 94 - 185
Target Start/End: Original strand, 31171804 - 31171895
Alignment:
Q  94 cattccgtacctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccac 185  Q
    |||||| |||||||| |||||||||| |  ||||||| || ||||| |||| || |||||||||||||||||||||||||||||||||||||    
T  31171804 cattccatacctaatcacgatcttctggcggaatcaaactgttgataatattttcagttgatctcagcaacgtcacccacatatcgatccac 31171895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 41363872 - 41363789
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  |||||||| | ||||||||||||| |||||||||||||||||| |||| |||||||||||||||    
T  41363872 ctaatgacgatcttctggaggaatcaagttgttgatgatatcttcagttgatctcagcaacgtaacccgcatatcgatccactg 41363789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 42168958 - 42169041
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  |||||||||| ||||||||||||| |||||||||| ||||||| |||| |||||||||||||||    
T  42168958 ctaatgacgatcttctggcggaatcaagctgttgatgatatcttcagttgatctctgcaacgttacccgcatatcgatccactg 42169041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 104 - 186
Target Start/End: Original strand, 38033923 - 38034005
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
    |||||||||||||||  |  |||||||||| ||||||||||||| |||||||||||||||||| |||| ||||||||||||||    
T  38033923 ctaatgacgatcttccggcggaatcaagctattgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccact 38034005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 33799549 - 33799632
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  |||||||| | ||||||||||||| |||||||||||||||||| | || |||||||||||||||    
T  33799549 ctaatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatctcagcaacgttatccgcatatcgatccactg 33799632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 185
Target Start/End: Complemental strand, 40415473 - 40415392
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccac 185  Q
    ||||||||||||||||    |||||||||| ||||||||||||| ||||||||||| ||||||||||  |||||||||||||    
T  40415473 ctaatgacgatcttctgacggaatcaagctgttgatgatatcttaagttgatctcaacaacgtcacctgcatatcgatccac 40415392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 31 - 186
Target Start/End: Original strand, 485186 - 485338
Alignment:
Q  31 tgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaa 130  Q
    |||||| ||||||||||||||| |||||||||||| | |||| |||||| |  ||  ||||  | | || || |||||||||||||| | |  |||||||    
T  485186 tgtttgacaagtttgaattacctcattcaaaggaatacaattgttgtagttggaa--tgcac-cttaccctaactaatgacgatcttgtggcggaatcaa 485282  T
Q  131 gcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
     |||||||||||||||| ||||||||| |||||| ||| || ||||||||||||||    
T  485283 acttttgatgatatcttcagttgatctaagcaacttcatccgcatatcgatccact 485338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 104 - 184
Target Start/End: Complemental strand, 24861559 - 24861479
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatcca 184  Q
    |||||||||||||||| |  |||||||| | ||||||||||||| |||||||||||||||| |||||| |||||| |||||    
T  24861559 ctaatgacgatcttctggcagaatcaagttgttgatgatatcttcagttgatctcagcaacatcacccgcatatcaatcca 24861479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 2417131 - 2417048
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| || |||||||| | |||||||||||||  |||||||||| ||||||||||  |||||||||| ||||    
T  2417131 ctaatgacgatcttctggtggaatcaagttgttgatgatatcttcggttgatctcatcaacgtcacctgcatatcgatcaactg 2417048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 34615169 - 34615086
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||||| || ||||||| || |||||||| | ||||||||||||| |||||||||||||||||| |||| |||||| ||||||||    
T  34615169 ctaattactatcttctggtggaatcaagttgttgatgatatcttcagttgatctcagcaacgttacccgcatatcaatccactg 34615086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 43638675 - 43638758
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |   ||||||| | ||||||||||||| |||||||||||||||||| || | ||||||||| |||||    
T  43638675 ctaatgacgatcttctggcgaaatcaagttgttgatgatatcttcagttgatctcagcaacgttacgcgcatatcgatgcactg 43638758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 186
Target Start/End: Original strand, 28706140 - 28706222
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
    |||||||| ||||||| |  |||||||||  ||||||||||||| ||||||||||| |||||| || | ||||||||||||||    
T  28706140 ctaatgacaatcttctggcggaatcaagcggttgatgatatcttcagttgatctcaacaacgttacacgcatatcgatccact 28706222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 187
Target Start/End: Original strand, 3589254 - 3589347
Alignment:
Q  94 cattccgtacctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| |||||||| |||||||||| |  ||||||| || ||||| || |||| ||||||||||| ||| || || | |||||||||||||||    
T  3589254 cattccctacctaatcacgatcttctggcggaatcaaactgttgataatgtcttcagttgatctcaacaatgttacacgcatatcgatccactg 3589347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 32 - 93
Target Start/End: Complemental strand, 16575965 - 16575904
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcatt 93  Q
    ||||||||||| ||||||||| |||||||||||||| |||| |||||| |  ||||||||||    
T  16575965 gtttggcaagtatgaattacctcattcaaaggaagacaattgttgtagttggaaggtgcatt 16575904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 22549295 - 22549232
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacc 170  Q
    |||||||||||||||| |  ||||||||   ||||||||||||| ||||||| ||||||||||||||    
T  22549295 ctaatgacgatcttctggcggaatcaag---ttgatgatatcttcagttgatgtcagcaacgtcacc 22549232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 42603931 - 42603981
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaa-ttaccccattcaaagg 63  Q
    ||||||||||| ||| ||| |||||||||||||| ||||||||||||||||    
T  42603931 gaatattggagtcctgctgcttggcaagtttgaatttaccccattcaaagg 42603981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 28167320 - 28167368
Alignment:
Q  16 atattggagaccttctgtttggcaagtttgaa-ttaccccattcaaagg 63  Q
    ||||||||| ||| ||| |||||||||||||| ||||||||||||||||    
T  28167320 atattggagtcctgctgcttggcaagtttgaatttaccccattcaaagg 28167368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 126; Significance: 4e-65; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 957366 - 957539
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||||||| | ||||||||||||| |||||||||||||||||||||| |||| ||||||||  ||||||||||||||||||||||||||||||    
T  957366 gaatattggagacctgccgtttggcaagtttcaattaccccattcaaaggaagacaattgttgtagctggaaggtgcattcattccgtacctaatgacga 957465  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| |  ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  957466 tcttctggcggaatcaaacttttgatgatatctttagttgatctcagcaacgtcacccgcatatcgatccactg 957539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 22437207 - 22437034
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||||||| | ||||||||||||||||||||||||||  |||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  22437207 gaatattggagacctgccgtttggcaagtttgaattaccccatttgaaggaagacaattgttgtagctaaaaggtgcattcattccgtacctaatgacga 22437108  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||  |  ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  22437107 tcttccggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 22437034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 6282234 - 6282407
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    |||||||| |||||| | |||||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||    
T  6282234 gaatattgaagacctgccgtttggcaagcttgaattaccccattcaaaggaagacaattgttgtagctaaaaggtgcattcattccgtaactaatgacga 6282333  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| |  ||||||| |||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||    
T  6282334 tcttctggcagaatcaaacttttgatgatatcttcagttgatcttagcaacttcacccgcatatcgatccactg 6282407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 21169747 - 21169574
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||| ||| | |||||||||||||||||||||||||||||||||||| |||| |||||| |  ||||||||||||||||||||||||||||||    
T  21169747 gaatattggagtcctgccgtttggcaagtttgaattaccccattcaaaggaagacaattgttgtagttggaaggtgcattcattccgtacctaatgacga 21169648  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| |  |||||||  ||||||||||||||| ||||||||||||||||||||||  |||||||||||||||    
T  21169647 tcttctggcggaatcaaatttttgatgatatcttcagttgatctcagcaacgtcacctgcatatcgatccactg 21169574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 34529707 - 34529880
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||| ||| | |||||||| ||||||||||||||||||||||||| | |||| ||||||||  || |||||||||||||||||||||||||||    
T  34529707 gaatattggagtcctgccgtttggcatgtttgaattaccccattcaaaggaatacaattgttgtagctttaatgtgcattcattccgtacctaatgacga 34529806  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| |  ||||||| |||||||||||||||| ||||||||||||||||||||||  |||||||||||||||    
T  34529807 tcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacctgcatatcgatccactg 34529880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 44560091 - 44560264
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||| ||||||||  ||||||||||||||||||||||||||||||    
T  44560091 gaatattggagacctgccgtttggcaagtttgaattaccccattcaaaggaagacaattgttgtagctggaaggtgcattcattccgtacctaatgacga 44560190  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||||   |   |||||| |||||||||||||||| ||||||||||||||||||||||| |||||| || |||||    
T  44560191 tcttaaggagaaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcaatacactg 44560264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 49791847 - 49792020
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||||||| | ||||| |||||||||||||||||||| ||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||    
T  49791847 gaatattggagacctgccgtttgacaagtttgaattaccccatttaaaggaagacaattgttgtagctaaaaggtgcattcattccgtacctaatgatga 49791946  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||| | |  |||||||| | ||||||||||||| |||||||||||||||||| |||  |||||||||||||||    
T  49791947 tcttttggcggaatcaagttgttgatgatatcttcagttgatctcagcaacgttacctgcatatcgatccactg 49792020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 32 - 187
Target Start/End: Original strand, 36776448 - 36776603
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||  ||||||||||||||| ||||||||||||||||||  ||  |||||||     
T  36776448 gtttggcaagtttgaattaccccattcaaaggaagacaattgttgtagctggaaggtgcattcattcggtacctaatgacgatctttcagcggaatcaaa 36776547  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||    
T  36776548 cttttgatgatatcttcagttgatctcaacaacgtcacccgcatatcgatccactg 36776603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 2773305 - 2773132
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    |||||||||||| || | ||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| |||||||    
T  2773305 gaatattggagaactgccgtttgacaagtttgaattaccccattcaaaggaagacaattgttgtagctaaaaggtgcattcattccgtacctgatgacga 2773206  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| |  |||||||| | |||||| |||||| |||||||||||  ||||| |||| |||||||||||||||    
T  2773205 tcttctggcggaatcaagttgttgatggtatcttcagttgatctcaataacgttacccgcatatcgatccactg 2773132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 34153197 - 34153370
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||||| | | |||||||||||||||||||||||||||||||||||| || | ||||||||  |||||||||||||||||||| |||||||||    
T  34153197 gaatattggagacatgccgtttggcaagtttgaattaccccattcaaaggaagacaactgttgtagctggaaggtgcattcattccgtacataatgacga 34153296  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| |  ||||||| |||||||||||||||| ||||||||||| |||||||| || ||||| |||||||||    
T  34153297 tcttctggcagaatcaaacttttgatgatatcttcagttgatctcaccaacgtcatccgcatattgatccactg 34153370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 18 - 187
Target Start/End: Original strand, 47657270 - 47657439
Alignment:
Q  18 attggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatctt 117  Q
    ||||||| ||| | ||||| ||||||||||||||| |||||||||||||| |||| ||||||||  || ||||||||||||  |||||||||||||||||    
T  47657270 attggagtcctgccgtttgacaagtttgaattacctcattcaaaggaagacaattgttgtagctggaatgtgcattcattcgatacctaatgacgatctt 47657369  T
Q  118 ctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    || || ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  47657370 ctggtggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 47657439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 49817555 - 49817727
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||| ||||| ||| |||||||||||||||||||||||||||||||| ||||| |||| |||||| | |||||| ||||||||||||||||||||||||    
T  49817555 gaatactggagtcctgctgtttggcaagtttgaattaccccattcaaatgaagacaattgttgtagttgaaaggtacattcattccgtacctaatgacga 49817654  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
    |||||| |  ||||||  || ||||| ||||||| |||||||||||||||||| |||| ||||||||||||||    
T  49817655 tcttctggcggaatcagactgttgataatatcttcagttgatctcagcaacgttacccgcatatcgatccact 49817727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 32 - 187
Target Start/End: Original strand, 43889428 - 43889583
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    |||||||||||||||||||||||||| | ||||||| |||| |||||| |  ||||||||||||||| |||||||||||||||||||| |  |||||||     
T  43889428 gtttggcaagtttgaattaccccatttagaggaagacaattgttgtagttggaaggtgcattcattcggtacctaatgacgatcttctggcggaatcaaa 43889527  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||| ||||||| ||||||||||| ||||||||||| |||||||||||||||    
T  43889528 cttttgattatatcttcagttgatctcaacaacgtcacccgcatatcgatccactg 43889583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 18 - 186
Target Start/End: Original strand, 49423672 - 49423841
Alignment:
Q  18 attggagaccttctgtttggcaagtttgaattaccccattcaaagg-aagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatct 116  Q
    ||||||| ||| | ||||| ||| |||||||||||||||||||||| || | |||| ||||||||  |||||||||||||||||||||||||||||||||    
T  49423672 attggagtcctgccgtttgacaaatttgaattaccccattcaaaggtaacacaattgttgtagctggaaggtgcattcattccgtacctaatgacgatct 49423771  T
Q  117 tctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
    | | |  ||||||| ||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||    
T  49423772 tatggcagaatcaaacttttgatgatttcttcagttgatctcagcaacgtcacccgcatatcgatccact 49423841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 32 - 187
Target Start/End: Original strand, 4785351 - 4785506
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    |||||||||||||||||||||||||  | ||||| | |||| |||||||| |||| ||||||||||| |||||||||||||||||| | |  |||||||     
T  4785351 gtttggcaagtttgaattaccccatctagaggaacacaattgttgtagctgaaagatgcattcattcggtacctaatgacgatcttgtggcggaatcaaa 4785450  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    || ||||| ||||||| ||||||| ||||||||||  ||| |||||||||||||||    
T  4785451 ctgttgataatatcttcagttgatatcagcaacgttccccgcatatcgatccactg 4785506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 21711736 - 21711653
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  |||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  21711736 ctaatgacgatcttctggcggaatcaagttgttgatgatatctttagttgatctcagcaacgtcacccgcatatcgatccactg 21711653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 37866613 - 37866530
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||||||||||||||||||  |||||||| | ||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  37866613 ctaatgacgatcttctagcggaatcaagatattgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 37866530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 31 - 187
Target Start/End: Original strand, 21017108 - 21017261
Alignment:
Q  31 tgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaa 130  Q
    |||||| ||||||||||||||| |||||||||||||| |||| |||||| |  ||  ||||  | | || || |||||||||||||||| |  |||||||    
T  21017108 tgtttgacaagtttgaattacctcattcaaaggaagacaattgttgtagttggaa--tgcac-cttaccctaactaatgacgatcttctggcggaatcaa 21017204  T
Q  131 gcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
     |||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||    
T  21017205 acttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactg 21017261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 242417 - 242500
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  |||||||||| ||||||||||||| |||||||||||||||||| |||| |||||||||||||||    
T  242417 ctaatgacgatcttctggcggaatcaagctgttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactg 242500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 96 - 187
Target Start/End: Original strand, 26591678 - 26591769
Alignment:
Q  96 ttccgtacctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||||||||||| |  |||||||| | ||||||||||||| ||||||||| |||||||| |||| |||||||||||||||    
T  26591678 ttccgtacctaatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatcttagcaacgttacccgcatatcgatccactg 26591769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 33163545 - 33163628
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  |||||||||| ||||||||||||| ||||||||||| |||||| ||||||||||||||||||||    
T  33163545 ctaatgacgatcttctggcggaatcaagctgttgatgatatcttcagttgatctcaacaacgttacccacatatcgatccactg 33163628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 39589135 - 39589052
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||||||||||||||||||  |||||||| | ||||||||||||| |||||||||||||||||||| || |||||||||||||||    
T  39589135 ctaatgacgatcttctagcggaatcaagttgttgatgatatcttcagttgatctcagcaacgtcatccgcatatcgatccactg 39589052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 104 - 186
Target Start/End: Complemental strand, 1226365 - 1226283
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
    |||||||||||||||| |  ||||||| |||||||||||||||| |||||||||||||||||| |||| ||||||||||||||    
T  1226365 ctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccact 1226283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 32 - 186
Target Start/End: Complemental strand, 42886544 - 42886390
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    |||||| |||||| ||||||||||| || ||||| | |||| ||||||||  ||||| |||| | || ||||||||||| |||||||| |  ||||||      
T  42886544 gtttggtaagtttaaattaccccatccagaggaatacaattgttgtagctggaaggtacattaaatcggtacctaatgatgatcttctggcggaatcaga 42886445  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
    || ||||| ||||||| |||||||||||||||||| |||| | ||||||||||||    
T  42886444 ctgttgataatatcttcagttgatctcagcaacgttacccgcgtatcgatccact 42886390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 31 - 187
Target Start/End: Original strand, 40353704 - 40353857
Alignment:
Q  31 tgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaa 130  Q
    |||||| || ||||||||||||||||||||||||||| |||| |||||| |  ||  ||||  | | || || |||||||| ||||||| |  |||||||    
T  40353704 tgtttgacaggtttgaattaccccattcaaaggaagacaattgttgtagttggaa--tgcac-cttaccctaactaatgacaatcttctggcggaatcaa 40353800  T
Q  131 gcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
     |||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||    
T  40353801 acttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactg 40353857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 104 - 185
Target Start/End: Complemental strand, 49064185 - 49064104
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccac 185  Q
    |||||||||||||||| |  ||||||| |||||||||||||||| ||||||||| ||||||||||||| |||||||||||||    
T  49064185 ctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctaagcaacgtcacccgcatatcgatccac 49064104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 31 - 187
Target Start/End: Complemental strand, 55797019 - 55796866
Alignment:
Q  31 tgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaa 130  Q
    |||||| ||||||||||||| |||||||||||||||| |||| |||||| |  ||  ||||  | | || || |||||||||||||| | |  |||||||    
T  55797019 tgtttgacaagtttgaattagcccattcaaaggaagacaattgttgtagttggaa--tgcac-cttaccctaactaatgacgatcttgtggcggaatcaa 55796923  T
Q  131 gcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
     |||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||    
T  55796922 acttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactg 55796866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 104 - 184
Target Start/End: Original strand, 14330695 - 14330775
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatcca 184  Q
    |||||||||||||||| |  ||||||| |||||||||||||||| |||||||||||||||||| |||| ||||||||||||    
T  14330695 ctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatcca 14330775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 32 - 187
Target Start/End: Original strand, 32937834 - 32937986
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    ||||| ||||||||||||||| |||||||||||||| |||| |||||| |  ||  ||||  | | || || |||||||||||||||| |  |||||||     
T  32937834 gtttgacaagtttgaattacctcattcaaaggaagacaattgttgtagttggaa--tgcac-cttaccctatctaatgacgatcttctggcggaatcaaa 32937930  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
     ||||||||||||||| ||||||||||| |||||| |||| |||||||||||||||    
T  32937931 tttttgatgatatcttcagttgatctcaacaacgttacccgcatatcgatccactg 32937986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 1042955 - 1042872
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  |||||||| | ||||| ||||||| ||||||||||||||||||||||| |||||||||||||||    
T  1042955 ctaatgacgatcttctggcggaatcaagttgttgattatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 1042872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 32 - 185
Target Start/End: Complemental strand, 24607027 - 24606877
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    |||||| |||||||||||||| |||||||||||||| |||| |||||| |  || || |||| |   | |||||||| |||||||||| |  ||||||      
T  24607027 gtttggaaagtttgaattacctcattcaaaggaagacaattgttgtagttggaatgtacattta---cctacctaatcacgatcttctggcggaatcaga 24606931  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccac 185  Q
    || ||||| ||||||| |||||||||||||||||| ||||||||||| ||||||    
T  24606930 ctcttgataatatcttcagttgatctcagcaacgttacccacatatcaatccac 24606877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 27759533 - 27759450
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  |||||||||| ||||||||||||| |||||||||||||||||| || | |||||||||||||||    
T  27759533 ctaatgacgatcttctggcggaatcaagctgttgatgatatcttcagttgatctcagcaacgttactcgcatatcgatccactg 27759450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 51428193 - 51428276
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  |||||||||| ||||||||||||| ||||||||||| |||||| |||| |||||||||||||||    
T  51428193 ctaatgacgatcttcttgcggaatcaagctgttgatgatatcttcagttgatctcaacaacgttacccgcatatcgatccactg 51428276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 104 - 186
Target Start/End: Original strand, 31824630 - 31824712
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
    ||||||||||||||||||  |||||||||| ||||||||||||| ||||||||| |||||||| |||| ||||| ||||||||    
T  31824630 ctaatgacgatcttctagcggaatcaagctgttgatgatatcttcagttgatctaagcaacgttacccgcatattgatccact 31824712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 104 - 185
Target Start/End: Complemental strand, 25762804 - 25762723
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccac 185  Q
    |||||||||||||||| |  |||||||| | ||||||||||||| |||||||||||||||||| |||| |||||||||||||    
T  25762804 ctaatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccac 25762723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 38 - 187
Target Start/End: Complemental strand, 11288562 - 11288418
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaagcttttg 137  Q
    ||||||||||||||| |||||||||||||| |||||| |||| |  |||||||||||    | ||| |||| |||||||||||   |||||||  || ||    
T  11288562 caagtttgaattacctcattcaaaggaagacaattatggtagttggaaggtgcattc----cctacttaatcacgatcttctaacagaatcaaa-ttgtg 11288468  T
Q  138 atgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    || ||||||| |||||||||||||||||| || | |||||||||||||||    
T  11288467 ataatatcttcagttgatctcagcaacgttactcgcatatcgatccactg 11288418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 38 - 187
Target Start/End: Complemental strand, 17211536 - 17211389
Alignment:
Q  38 caagtttgaattaccccatt-caaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaagctttt 136  Q
    ||||||||||||||| |||| || || |||| |||| |||||| |  ||| ||||||   ||| |||||||| |||||||||| |  ||||||  || ||    
T  17211536 caagtttgaattacctcatttcagagtaagacaattgttgtagttggaagatgcatt---tccctacctaatcacgatcttctggcggaatcagactgtt 17211440  T
Q  137 gatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||| |||||||||||||||||||||||||| |||| |||||||||||||||    
T  17211439 gataatatctttagttgatctcagcaacgttacccgcatatcgatccactg 17211389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 6177316 - 6177399
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||| | |  ||||||| |||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||    
T  6177316 ctaatgacgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactg 6177399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 101 - 184
Target Start/End: Original strand, 20778867 - 20778950
Alignment:
Q  101 tacctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatcca 184  Q
    ||||||||||||||||| | |  ||||||| |||||||||||||||| |||||||||||||||||  |||| ||||||||||||    
T  20778867 tacctaatgacgatcttttggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgaaacccgcatatcgatcca 20778950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 41794563 - 41794646
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||| | |  ||||||| |||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||    
T  41794563 ctaatgacgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactg 41794646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 51027768 - 51027851
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||| | || |||||||| | ||||||||||||| ||||||||||| |||||| |||| |||||||||||||||    
T  51027768 ctaatgacgatcttatggtggaatcaagttgttgatgatatcttcagttgatctcaacaacgttacccgcatatcgatccactg 51027851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 56139116 - 56139033
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||| | |  ||||||| |||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||    
T  56139116 ctaatgacgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactg 56139033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 9489884 - 9489801
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  |||||||| | ||||||||||||| |||||||||||  |||||||||| |||||| ||||||||    
T  9489884 ctaatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatctcaataacgtcacccgcatatcaatccactg 9489801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 45939731 - 45939648
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||| | |  |||||||| | ||||||||||||| |||||||||||||||||| || | |||||||||||||||    
T  45939731 ctaatgacgatcttatggaagaatcaagttgttgatgatatcttcagttgatctcagcaacgttactcgcatatcgatccactg 45939648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 49094951 - 49094868
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||| | |  ||||||| ||||||| |||||||| ||||||||| |||||| |||||| |||||||||||||||    
T  49094951 ctaatgacgatcttgtggcggaatcaaacttttgacgatatcttcagttgatctaagcaacttcacccgcatatcgatccactg 49094868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 186
Target Start/End: Original strand, 20901669 - 20901751
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
    |||||||||||||||  || |||||||| | ||||||||||||| ||||||||||||||  || |||| ||||||||||||||    
T  20901669 ctaatgacgatcttcaggtggaatcaagttgttgatgatatcttcagttgatctcagcagtgttacccgcatatcgatccact 20901751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 38 - 187
Target Start/End: Complemental strand, 18412864 - 18412718
Alignment:
Q  38 caagtttgaattaccccatt-caaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaagctttt 136  Q
    |||||||||||||||||||| || || |||| |||| |||||| |  |||||||||||    | |||||||| |||||||||| |  |||||||  | ||    
T  18412864 caagtttgaattaccccatttcagagtaagacaattgttgtagttggaaggtgcattc----cctacctaatcacgatcttctggcagaatcaaattgtt 18412769  T
Q  137 gatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||| |||| || |||||||||||||||||| || | |||||||||||||||    
T  18412768 gataatatattcagttgatctcagcaacgttacacgcatatcgatccactg 18412718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 38 - 106
Target Start/End: Complemental strand, 49064631 - 49064563
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtaccta 106  Q
    ||||||||||||||| |||||||||||||| |||| ||| || |  |||||||||||||||||||||||    
T  49064631 caagtttgaattacctcattcaaaggaagacaattgttgcagttggaaggtgcattcattccgtaccta 49064563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 46816526 - 46816607
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  |||||||||| ||||||||||||| |  |||||||| |||||| |||  |||||||||||||||    
T  46816526 ctaatgacgatcttctggcggaatcaagctattgatgatatcttca--tgatctcaacaacgttacctgcatatcgatccactg 46816607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 185
Target Start/End: Complemental strand, 13850965 - 13850874
Alignment:
Q  94 cattccgtacctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccac 185  Q
    |||||| |||||||| ||| |||||| |  ||||||| || ||||  ||||||||||||||||||||||| || ||  ||||||||||||||    
T  13850965 cattccctacctaatcacggtcttctggcggaatcaaactgttgagaatatctttagttgatctcagcaatgttacatacatatcgatccac 13850874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 28082444 - 28082361
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  |||||||  ||||||||||||||| ||||||||| || ||| |||||  ||||| |||||||||    
T  28082444 ctaatgacgatcttctggcggaatcaaatttttgatgatatcttcagttgatctaagtaacttcacctgcatattgatccactg 28082361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 185
Target Start/End: Complemental strand, 31324390 - 31324299
Alignment:
Q  94 cattccgtacctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccac 185  Q
    |||||| |||||||| | ||||||||||  ||||||| || ||||  || |||| |||||||||||||||| | || |||||||||||||||    
T  31324390 cattccctacctaatcatgatcttctagcggaatcaaactgttgagaatgtcttcagttgatctcagcaactttacacacatatcgatccac 31324299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 186
Target Start/End: Complemental strand, 3393520 - 3393428
Alignment:
Q  94 cattccgtacctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
    |||||| |||||||| | |||||||| |  ||||||  || ||||| ||||||| |||||||||||||||||| ||   ||||||||||||||    
T  3393520 cattccctacctaatcatgatcttctggcggaatcagactgttgataatatcttcagttgatctcagcaacgttacatgcatatcgatccact 3393428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 94 - 185
Target Start/End: Complemental strand, 13866479 - 13866388
Alignment:
Q  94 cattccgtacctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccac 185  Q
    |||||| |||||||| ||| |||||| |  ||||||| || ||||  ||||||| |||||||||||||||||| ||  ||||||| ||||||    
T  13866479 cattccctacctaatcacggtcttctggcggaatcaaactgttgagaatatcttcagttgatctcagcaacgttacatacatatcaatccac 13866388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 14 - 79
Target Start/End: Complemental strand, 26591652 - 26591585
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaa-ttaccccattcaaagg-aagataattattgtag 79  Q
    ||||||||||| ||| ||| |||||||||||||| |||||||||||||||| |||| |||| ||||||    
T  26591652 gaatattggagtcctgctgcttggcaagtttgaatttaccccattcaaaggtaagacaattgttgtag 26591585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 22437381 - 22437431
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaa-ttaccccattcaaagg 63  Q
    ||||||||||| ||| ||| |||||||||||||| ||||||||||||||||    
T  22437381 gaatattggagtcctgctgcttggcaagtttgaatttaccccattcaaagg 22437431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 68
Target Start/End: Original strand, 34152892 - 34152922
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagat 68  Q
    |||||||||||||||||||||||||||||||    
T  34152892 caagtttgaattaccccattcaaaggaagat 34152922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 36776126 - 36776160
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagataatt 72  Q
    |||||||||||||||||||||||||||||| ||||    
T  36776126 caagtttgaattaccccattcaaaggaagacaatt 36776160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 42886992 - 42887058
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaa-ttaccccattcaaagg-aagataattattgta 78  Q
    ||||||||||| ||| |||||| ||||||||||| |||||||||||| ||| ||||||||| |||||    
T  42886992 gaatattggagtcctgctgtttagcaagtttgaatttaccccattcagaggtaagataattgttgta 42887058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 44559893 - 44559927
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagataatt 72  Q
    |||||||||||||||||||||||||||||| ||||    
T  44559893 caagtttgaattaccccattcaaaggaagacaatt 44559927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 49791543 - 49791577
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagataatt 72  Q
    |||||||||||||||||||||||||||||| ||||    
T  49791543 caagtttgaattaccccattcaaaggaagacaatt 49791577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 49423364 - 49423405
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagataattattgtag 79  Q
    |||||||||||||||||||||| ||||||| |||| ||||||    
T  49423364 caagtttgaattaccccattcagaggaagacaattgttgtag 49423405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 94 - 187
Target Start/End: Original strand, 49817188 - 49817281
Alignment:
Q  94 cattccgtacctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| |||||||| |||||||| | |  ||||||  || ||||| ||||||| | ||||||||| |||||| || | |||||||||||||||    
T  49817188 cattccctacctaatcacgatcttttggcagaatcagactgttgataatatcttcatttgatctcatcaacgttacacgcatatcgatccactg 49817281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 10312447 - 10312395
Alignment:
Q  135 ttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||||| ||||||| ||||||||| | |||||| |||| |||||||||||||||    
T  10312447 ttgataatatcttcagttgatcttaacaacgttacccgcatatcgatccactg 10312395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 114
Target Start/End: Original strand, 14330250 - 14330326
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgat 114  Q
    ||||||||||||||| |||||||||||||| |||| ||  || |  ||||||||||  |||||||| || |||||||    
T  14330250 caagtttgaattacctcattcaaaggaagacaattgttacagttggaaggtgcatttgttccgtacttactgacgat 14330326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 126; Significance: 4e-65; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 35491935 - 35491762
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||| ||||||||  ||||||||||||||||||||||||||||||    
T  35491935 gaatattggagacctgccgtttggcaagtttgaattaccccattcaaaggaagacaattgttgtagctggaaggtgcattcattccgtacctaatgacga 35491836  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| |  ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  35491835 tcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 35491762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 41499000 - 41499173
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    |||||||||||||||   ||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  41499000 gaatattggagacctgtcgtttggcaagtttgaattacctcattcaaaggaagacaattgttgtagctaaaaggtgcattcattccgtacctaatgacga 41499099  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| |  ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  41499100 tcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcaccctcatatcgatccactg 41499173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 18 - 186
Target Start/End: Original strand, 40677285 - 40677453
Alignment:
Q  18 attggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatctt 117  Q
    ||||||| ||| | |||||||||||||||||||||||||||||||||| | ||||  |||||||  ||||||||||||||||||||||||||||||||||    
T  40677285 attggagtcctgccgtttggcaagtttgaattaccccattcaaaggaatacaattggtgtagctgcaaggtgcattcattccgtacctaatgacgatctt 40677384  T
Q  118 ctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
    ||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  40677385 ctagcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccact 40677453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 18 - 187
Target Start/End: Complemental strand, 6977132 - 6976963
Alignment:
Q  18 attggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatctt 117  Q
    ||||||| ||| | |||||||||||||||||||||||||||| ||||||| |||| ||||||||  ||||||||||||||| ||||||||||||||||||    
T  6977132 attggagtcctgccgtttggcaagtttgaattaccccattcagaggaagacaattgttgtagctggaaggtgcattcattcggtacctaatgacgatctt 6977033  T
Q  118 ctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    || |  ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  6977032 ctcgcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 6976963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 34521590 - 34521763
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||| ||| | |||||||||||||||||||||||||||||||||||| |||| ||||||||  ||||||||||||||| ||||||||||||||    
T  34521590 gaatattggagtcctaccgtttggcaagtttgaattaccccattcaaaggaagacaattgttgtagctggaaggtgcattcattcggtacctaatgacga 34521689  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||| |    ||||||| |||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||    
T  34521690 tcttatgagggaatcaaacttttgatgatatcttcagttgatctcaacaacgtcacccgcatatcgatccactg 34521763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 32 - 187
Target Start/End: Original strand, 37312419 - 37312574
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    |||||||||||||||||||||||||||| ||||||  |||| ||||||||  ||||||||||||||| |||||||||||||||||||| |  |||||||     
T  37312419 gtttggcaagtttgaattaccccattcataggaagtcaattgttgtagctgtaaggtgcattcattcggtacctaatgacgatcttctggcagaatcaaa 37312518  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  37312519 cttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 37312574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 32 - 188
Target Start/End: Original strand, 2919289 - 2919445
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    ||||||||||||||||||||| |||||||||||||| |||| ||||||||  |||||||||||||||||||||||||||||||||| | |  |||||||     
T  2919289 gtttggcaagtttgaattaccacattcaaaggaagacaattgttgtagctggaaggtgcattcattccgtacctaatgacgatcttttggcggaatcaaa 2919388  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactgt 188  Q
    ||||| |||||||||| ||||||||||||||||||||||| |||||||||| |||||    
T  2919389 cttttaatgatatcttcagttgatctcagcaacgtcacccgcatatcgatctactgt 2919445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 33 - 187
Target Start/End: Original strand, 27130434 - 27130588
Alignment:
Q  33 tttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaagc 132  Q
    |||||||| |||||||||||||||||||||||||| |||| || |||||  ||||||||||||||| |||||||||||| ||||||| |  ||||||| |    
T  27130434 tttggcaaatttgaattaccccattcaaaggaagacaattgttttagctggaaggtgcattcattcggtacctaatgactatcttctggcggaatcaaac 27130533  T
Q  133 ttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  27130534 ttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 27130588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 19471540 - 19471713
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||| ||| |  |||| |||||||||||||||| ||||| ||||||| |||| ||||||||  ||||||||||||||||||||||||||||||    
T  19471540 gaatattggagccctgccatttgacaagtttgaattacccaattcagaggaagacaattgttgtagctggaaggtgcattcattccgtacctaatgacga 19471639  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| |  ||||||| |||||||||||||||| ||||||||| ||||||||||||| ||||||||| |||||    
T  19471640 tcttctggcggaatcaaacttttgatgatatcttcagttgatcttagcaacgtcacccgcatatcgatacactg 19471713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 10364543 - 10364716
Alignment:
Q  14 gaatattggagaccttct-gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacg 112  Q
    ||||||||||||||| |  |||||||||||||||||||||||||| ||||||||| |||| ||||||||  |||||||||||||||| ||| ||||||||    
T  10364543 gaatattggagacctgcccgtttggcaagtttgaattaccccatttaaaggaagacaattgttgtagctggaaggtgcattcattcc-tacgtaatgacg 10364641  T
Q  113 atcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||||||| |  ||||||| |||||||||||||||| | |||||||||||||| |||||| |||||||||||||||    
T  10364642 atcttctggcggaatcaaacttttgatgatatcttcaattgatctcagcaacatcacccgcatatcgatccactg 10364716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 43491749 - 43491600
Alignment:
Q  15 aatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgat 114  Q
    ||||||||||| || | |||||||||||||||||||||||||||||||||||  |||| |||||| |  ||||||||||| |||||||||||||||||||    
T  43491749 aatattggagatctgccgtttggcaagtttgaattaccccattcaaaggaaggcaattgttgtagttggaaggtgcattctttccgtacctaatgacgat 43491650  T
Q  115 cttctagttgaatcaagcttttgatgatatctttagttgatctcagcaac 164  Q
    ||||| |  ||||||| |||||||||||||||| ||||||||||||||||    
T  43491649 cttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaac 43491600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 31 - 187
Target Start/End: Complemental strand, 29068009 - 29067856
Alignment:
Q  31 tgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaa 130  Q
    |||||| |||||||||||||||||||||||||||||| |||| ||||||||  ||  ||||  | | || || |||||||||||||||| |  |||||||    
T  29068009 tgtttgacaagtttgaattaccccattcaaaggaagacaattgttgtagctggaa--tgcac-cttaccctaactaatgacgatcttctggcggaatcaa 29067913  T
Q  131 gcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
     |||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||    
T  29067912 acttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactg 29067856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 32 - 186
Target Start/End: Original strand, 17796034 - 17796185
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    ||||||||||||||||||||| |||||||||||||| |||| |||||| |  |||   ||||   ||| ||||||||||||| |||||    ||| |||     
T  17796034 gtttggcaagtttgaattacctcattcaaaggaagacaattgttgtagttggaagacacatt---tccctacctaatgacgagcttctgacggaaccaaa 17796130  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
    |||||||||||||||| |||||||||||||||||| |||| ||||||||||||||    
T  17796131 cttttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccact 17796185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 42120222 - 42120139
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  |||||||||| ||||||||||||| |||||||||||||||||| ||||||||||| ||||||||    
T  42120222 ctaatgacgatcttctggcggaatcaagctgttgatgatatcttcagttgatctcagcaacgttacccacatatcaatccactg 42120139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 104 - 178
Target Start/End: Complemental strand, 16582034 - 16581960
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatc 178  Q
    ||||||| ||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  16582034 ctaatgaagatcttctagcggaatcaagcttttgatgatatcttcagttgatctcagcaacgtcacccgcatatc 16581960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 104 - 184
Target Start/End: Complemental strand, 5420679 - 5420599
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatcca 184  Q
    |||||||||||||||  || ||||||| |||||||||||||||| ||||||| ||||||||||||||| ||||||||||||    
T  5420679 ctaatgacgatcttcaggtggaatcaaacttttgatgatatcttcagttgatatcagcaacgtcacccgcatatcgatcca 5420599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 3941947 - 3941864
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  |||||||| | ||||||||||||| ||||||||||| ||||||||||| |||||||||||||||    
T  3941947 ctaatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatctcatcaacgtcacccgcatatcgatccactg 3941864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 39 - 187
Target Start/End: Complemental strand, 33404286 - 33404142
Alignment:
Q  39 aagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaagcttttga 138  Q
    |||||||||||||| |||||||||||||| |||| |||||| |  |||||||||||    | |||||||| |||||||||| |    ||||  || ||||    
T  33404286 aagtttgaattacctcattcaaaggaagacaattgttgtagttggaaggtgcattc----cctacctaatcacgatcttctggcgacatcagactgttga 33404191  T
Q  139 tgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    | ||||||| |||||||||||||||||| |||| |||||||||||||||    
T  33404190 taatatcttcagttgatctcagcaacgttacccgcatatcgatccactg 33404142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 31 - 187
Target Start/End: Original strand, 3936990 - 3937143
Alignment:
Q  31 tgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaa 130  Q
    |||||| ||||||||||||||| |||||||||||| | |||| |||||| |  ||  ||||  | | || || |||||||||||||| | |  |||||||    
T  3936990 tgtttgacaagtttgaattacctcattcaaaggaatacaattgttgtagttggaa--tgcac-cttaccctaactaatgacgatcttgtggcggaatcaa 3937086  T
Q  131 gcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
     |||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||    
T  3937087 acttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactg 3937143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 31 - 187
Target Start/End: Complemental strand, 43983136 - 43982983
Alignment:
Q  31 tgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaa 130  Q
    |||||| ||||||||||||||| |||||||||||| | |||| |||||| |  ||  ||||  | | || || |||||||||||||| | |  |||||||    
T  43983136 tgtttgacaagtttgaattacctcattcaaaggaatacaattgttgtagttggaa--tgcac-cttaccctaactaatgacgatcttgtggcggaatcaa 43983040  T
Q  131 gcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
     |||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||    
T  43983039 acttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactg 43982983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 104 - 184
Target Start/End: Original strand, 12968298 - 12968378
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatcca 184  Q
    |||||||||||||||| |  |||||||| | ||||||||||||| |||||||||||||||||| |||| ||||||||||||    
T  12968298 ctaatgacgatcttctggaggaatcaagttgttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatcca 12968378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 31 - 186
Target Start/End: Complemental strand, 17425069 - 17424917
Alignment:
Q  31 tgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaa 130  Q
    |||||| ||||||||||||||| |||||||||||||| || | |||||| |  ||  ||||  | | || || |||||||||||||| | |  |||||||    
T  17425069 tgtttgacaagtttgaattacctcattcaaaggaagacaaatgttgtagttggaa--tgcac-cttaccctaactaatgacgatcttgtggcggaatcaa 17424973  T
Q  131 gcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
     |||||||||||||||| ||||||||| |||||| |||||| ||||||||||||||    
T  17424972 acttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccact 17424917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 10360195 - 10360278
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  |||||||||| ||||||| ||||| |||||||||||||||| | |||| |||||||||||||||    
T  10360195 ctaatgacgatcttctggcggaatcaagctgttgatgaaatcttcagttgatctcagcaacattacccgcatatcgatccactg 10360278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 22493481 - 22493398
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  |||||||| | |||||||||||||||||||||||||| ||||| |||| |||||| ||||||||    
T  22493481 ctaatgacgatcttctggcggaatcaagttgttgatgatatctttagttgatctcaggaacgttacccgcatatcaatccactg 22493398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 42241095 - 42241178
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||| | |  ||||||| |||||| ||||||||| ||||||||||||||||||||||| |||||||||| ||||    
T  42241095 ctaatgacgatcttatggcagaatcaaacttttggtgatatcttcagttgatctcagcaacgtcacccgcatatcgatcaactg 42241178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 184
Target Start/End: Complemental strand, 22002114 - 22001964
Alignment:
Q  31 tgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaa 130  Q
    |||||| ||||||||||||||| |||||||||||||| |||| |||||| |  ||  ||||  | | |  || |||||||| ||||||| |  |||||||    
T  22002114 tgtttgacaagtttgaattacctcattcaaaggaagacaattgttgtagttggaa--tgcaa-cttacaataactaatgacaatcttctggcggaatcaa 22002018  T
Q  131 gcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatcca 184  Q
     |||||||||||||||| ||||||||| |||||| |||||| ||||||||||||    
T  22002017 acttttgatgatatcttaagttgatctaagcaacttcacccgcatatcgatcca 22001964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 104 - 186
Target Start/End: Complemental strand, 39394101 - 39394019
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
    ||||||||||||||||    |||||||| | || |||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  39394101 ctaatgacgatcttctgacggaatcaagttgttaatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccact 39394019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 32 - 187
Target Start/End: Complemental strand, 29111437 - 29111285
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    ||||| ||||||||||||||| ||||||||||||||||||| |||||| |  ||  |||| |  | || |||||| ||||| | |||| |  |||| ||     
T  29111437 gtttgacaagtttgaattaccacattcaaaggaagataattgttgtagttggaa--tgcactt-taccctacctagtgacgttattctggcggaattaaa 29111341  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
     |||||||||||||||  ||||||||||||||||| |||| |||||||||||||||    
T  29111340 tttttgatgatatcttcggttgatctcagcaacgttacccgcatatcgatccactg 29111285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 32734837 - 32734773
Alignment:
Q  124 gaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactgt 188  Q
    |||||||||| ||||||||||||| ||||||| ||| |||||| |||| ||||||||||||||||    
T  32734837 gaatcaagctgttgatgatatcttcagttgatatcaacaacgttacccgcatatcgatccactgt 32734773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 95 - 166
Target Start/End: Complemental strand, 16253674 - 16253603
Alignment:
Q  95 attccgtacctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgt 166  Q
    ||||| |||||||| |||||||||| || ||||||| || | ||| ||||||||||||||||||||||||||    
T  16253674 attccctacctaatcacgatcttctggtggaatcaaactgtcgataatatctttagttgatctcagcaacgt 16253603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 94 - 185
Target Start/End: Original strand, 27650413 - 27650504
Alignment:
Q  94 cattccgtacctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccac 185  Q
    |||||| |||||||| |||||||||| |  ||||||| || ||||  ||||||| |||||||||||||||||| ||  ||||||||||||||    
T  27650413 cattccctacctaatcacgatcttctggcggaatcaaactgttgagaatatcttcagttgatctcagcaacgtgacaaacatatcgatccac 27650504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 124 - 187
Target Start/End: Complemental strand, 29906772 - 29906709
Alignment:
Q  124 gaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||| | |||||||||| || |||||||||||||||||| |||| |||||||||||||||    
T  29906772 gaatcaagttgttgatgatattttcagttgatctcagcaacgttacccgcatatcgatccactg 29906709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 104 - 166
Target Start/End: Complemental strand, 18393559 - 18393497
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgt 166  Q
    |||||||||||||||| |  |||||||| | || |||||||||| ||||||||||||||||||    
T  18393559 ctaatgacgatcttctggcagaatcaagttgtttatgatatcttcagttgatctcagcaacgt 18393497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 182
Target Start/End: Original strand, 15891633 - 15891721
Alignment:
Q  94 cattccgtacctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatc 182  Q
    |||||| |||||||| ||||| ||||||  ||||||| || ||||  ||||||| |||||||||| ||||||| ||  |||||||||||    
T  15891633 cattccctacctaatcacgatattctagcggaatcaaactgttgagaatatcttcagttgatctccgcaacgtgacaaacatatcgatc 15891721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 2918972 - 2919006
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagataatt 72  Q
    |||||||||||||||||||||||||||||| ||||    
T  2918972 caagtttgaattaccccattcaaaggaagacaatt 2919006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 6977440 - 6977406
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagataatt 72  Q
    |||||||||||||||||||||||||||||| ||||    
T  6977440 caagtttgaattaccccattcaaaggaagacaatt 6977406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 17538550 - 17538584
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagataatt 72  Q
    |||||||||||||||||||||||||||||| ||||    
T  17538550 caagtttgaattaccccattcaaaggaagacaatt 17538584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 63
Target Start/End: Complemental strand, 19471366 - 19471316
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaa-ttaccccattcaaagg 63  Q
    ||||||||||| ||| ||| |||||||||||||| ||||||||||||||||    
T  19471366 gaatattggagtcctgctgcttggcaagtttgaatttaccccattcaaagg 19471316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 63
Target Start/End: Original strand, 43491924 - 43491974
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaa-ttaccccattcaaagg 63  Q
    ||||||||||| ||| ||| |||||||||||||| ||||||||||||||||    
T  43491924 gaatattggagtcctgctgcttggcaagtttgaatttaccccattcaaagg 43491974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 6977312 - 6977360
Alignment:
Q  16 atattggagaccttctgtttggcaagtttgaa-ttaccccattcaaagg 63  Q
    ||||||||| ||| ||| |||||||||||||| ||||||||||||||||    
T  6977312 atattggagtcctgctgcttggcaagtttgaatttaccccattcaaagg 6977360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 122; Significance: 9e-63; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 30354724 - 30354897
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||||||| | ||||||||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  30354724 gaatattggagacctgccgtttggcaagtttgaattacctcattcaaaggaagacaattgttgtagctaaaaggtgcattcattccgtacctaatgacga 30354823  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||| | |  ||||||| |||||||||||||||| || ||||||||||||||||| ||||||||||||||||||    
T  30354824 tcttttggcagaatcaaacttttgatgatatcttcagctgatctcagcaacgtcatccacatatcgatccactg 30354897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 14 - 186
Target Start/End: Original strand, 21187208 - 21187380
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||| ||||||| | ||||| ||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||    
T  21187208 gaatatttgagacctgccgtttgacaagtttgaattacctcattcaaaggaagacaattattgtagctgaaaggtgcattcattcagtacctaatgacga 21187307  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
    ||||||    ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  21187308 tcttctgacggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccact 21187380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 41049081 - 41048908
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||| ||||| | | |||| ||||||||||||||||||||||||||||||| |||| ||||||||  |||||||||||||| |||||||||||||||    
T  41049081 gaatattagagacttgccgttttgcaagtttgaattaccccattcaaaggaagacaattgttgtagctggaaggtgcattcatttcgtacctaatgacga 41048982  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| |  ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  41048981 tcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 41048908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 43351009 - 43351181
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||||||| | ||||||||||||||||||||| |||||||||||||| |||| ||||||||  ||||||||||||||| ||||||||||||||    
T  43351009 gaatattggagacctgccgtttggcaagtttgaattacctcattcaaaggaagacaattgttgtagctggaaggtgcattcattctgtacctaatgacga 43351108  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| || ||||||  | |||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  43351109 tcttctggtggaatcagacatttgatgatatcttcagttgatctcagcaacgtcaccc-catatcgatccactg 43351181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 48315089 - 48315262
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||| ||||| |||  ||||||||  ||||||||||||||||||||||||||||||    
T  48315089 gaatattggagacctgccgtttggcaagtttgaattaccccattcaaatgaagacaatcgttgtagctggaaggtgcattcattccgtacctaatgacga 48315188  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||| | |  ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||    
T  48315189 tcttatggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatctactg 48315262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 18 - 186
Target Start/End: Complemental strand, 42735556 - 42735388
Alignment:
Q  18 attggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatctt 117  Q
    ||||||| ||||| ||||||||||||||||||||| |||||||||||||| |||| ||||||||  ||||||||||||||| ||||||||||||||||||    
T  42735556 attggagtccttccgtttggcaagtttgaattaccacattcaaaggaagacaattgttgtagctggaaggtgcattcattcggtacctaatgacgatctt 42735457  T
Q  118 ctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
    || |  ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||| ||||    
T  42735456 cttgcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgattcact 42735388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 15 - 187
Target Start/End: Original strand, 36393734 - 36393906
Alignment:
Q  15 aatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgat 114  Q
    ||||||||| ||||   |||||||||||||||||||||||||||||||||||| |||| | ||||||  ||||||||||||||| ||||||||||| |||    
T  36393734 aatattggaaacctgtcgtttggcaagtttgaattaccccattcaaaggaagacaattgtcgtagctggaaggtgcattcattcagtacctaatgaagat 36393833  T
Q  115 cttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||| | |  ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  36393834 cttatggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 36393906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 46862103 - 46862276
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||||| | | |||||||||||||||||||||||||||||| ||||| |||| ||||| ||  |||||||||||||||||||||| |||||||    
T  46862103 gaatattggagacatgccgtttggcaagtttgaattaccccattcaaaagaagacaattgttgtatctggaaggtgcattcattccgtaccttatgacga 46862202  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| |  ||||||| |||||||| ||||||| |||| |||||||||||||||| | |||||||||||||||    
T  46862203 tcttctggcggaatcaaacttttgatcatatcttcagttaatctcagcaacgtcactcgcatatcgatccactg 46862276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 48270946 - 48270773
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||| ||||||| | || ||||||||||||||||||||||| |||| |||| |||| |||||| |  || ||||||||||||||||||||| |||||    
T  48270946 gaatatttgagacctgccgtctggcaagtttgaattaccccattaaaagaaagacaattgttgtagttggaatgtgcattcattccgtacctaacgacga 48270847  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| |  ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  48270846 tcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 48270773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 32 - 187
Target Start/End: Original strand, 15337832 - 15337987
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    |||||||||||||||||||||||||||||||||||| |||| || ||| || |||||||||||||||| ||||||||||||||||||| |  ||||||      
T  15337832 gtttggcaagtttgaattaccccattcaaaggaagacaattgttttagttagaaggtgcattcattccatacctaatgacgatcttctggcggaatcaga 15337931  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    || || || ||||||| |||||||||||||||||| |||| |||||||||||||||    
T  15337932 ctgtttataatatcttcagttgatctcagcaacgttacccgcatatcgatccactg 15337987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 6e-39
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 21650821 - 21650649
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||||||||||| |||| ||||||||   |||| ||||||||| ||| ||||||| ||    
T  21650821 gaatattggagtcctgctgtttggcaagtttgaattaccc-attcaaaggaagacaattgttgtagctggtaggttcattcattcggtaactaatgatga 21650723  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||| | |  ||||||  || ||||| ||||||| |||||||||||||||||| ||||||||||||||||||||    
T  21650722 tcttatggcggaatcagactgttgataatatcttcagttgatctcagcaacgttacccacatatcgatccactg 21650649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 32 - 184
Target Start/End: Original strand, 28114320 - 28114472
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    |||||| |||||||||||||| |||||||||||||| |||| ||||||||  |||||||||| |||| |||||||||||| ||||| |    |||||||     
T  28114320 gtttggaaagtttgaattaccacattcaaaggaagacaattgttgtagctggaaggtgcatttattcggtacctaatgacaatcttttgacagaatcaaa 28114419  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatcca 184  Q
     ||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  28114420 tttttgatgatatcttcagttgatctcagcaacgtcacccacatttcgatcca 28114472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 42 - 186
Target Start/End: Original strand, 21614700 - 21614841
Alignment:
Q  42 tttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaagcttttgatga 141  Q
    ||||||||||| |||||||||||||| |||| |||||| | |||||||||||   ||| |||||||| |||| ||||| |  |||||||  |||||||||    
T  21614700 tttgaattacctcattcaaaggaagacaattgttgtagttgaaaggtgcatt---tccctacctaatcacgaacttctggcggaatcaaaattttgatga 21614796  T
Q  142 tatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
    |||||| |||||||||||||||||| |||| ||||||||||||||    
T  21614797 tatcttcagttgatctcagcaacgttacccgcatatcgatccact 21614841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 2206036 - 2206119
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  |||||||||| ||||||||||||| |||||||||||||||||| |||| |||||||||||||||    
T  2206036 ctaatgacgatcttctggcggaatcaagctgttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactg 2206119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 39477239 - 39477322
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  |||||||| | || |||||||||||||||||||||||||||||||||| |||||||||||||||    
T  39477239 ctaatgacgatcttctggcggaatcaagttgttaatgatatctttagttgatctcagcaacgtcacccgcatatcgatccactg 39477322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 41217822 - 41217739
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| || |||||||| | ||||||||||||| |||||||||||||||||| |||| |||||||||||||||    
T  41217822 ctaatgacgatcttctggtggaatcaagttgttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactg 41217739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 34141073 - 34140990
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||| | |   |||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  34141073 ctaatgacgatcttatggcgaaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 34140990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 31 - 188
Target Start/End: Complemental strand, 13920584 - 13920430
Alignment:
Q  31 tgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaa 130  Q
    |||||| |||||||||||||||||||||||||||||| |||| |||||| |  ||  ||||| | | || || |||||||||||||| | |   ||||||    
T  13920584 tgtttgacaagtttgaattaccccattcaaaggaagacaattgttgtagttggaa--tgcat-cttaccctaactaatgacgatcttatggcgaaatcaa 13920488  T
Q  131 gcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactgt 188  Q
      ||||||||||||||| ||||||||| |||||| |||||  ||||||||||||||||    
T  13920487 atttttgatgatatcttcagttgatctaagcaacttcacctgcatatcgatccactgt 13920430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 31 - 187
Target Start/End: Original strand, 9367049 - 9367202
Alignment:
Q  31 tgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaa 130  Q
    |||||| ||||||||||||||| |||||||||||| | |||| |||||| |  ||  ||||  | | || || |||||||||||||| | |  |||||||    
T  9367049 tgtttgacaagtttgaattacctcattcaaaggaatacaattgttgtagttggaa--tgcac-cttaccctaactaatgacgatcttgtggcggaatcaa 9367145  T
Q  131 gcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
     |||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||    
T  9367146 acttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactg 9367202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 124 - 187
Target Start/End: Complemental strand, 17183400 - 17183337
Alignment:
Q  124 gaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||||||| |||||||||||||||| |||||||||||||||| |||||| |||||||||||||||    
T  17183400 gaatcaaacttttgatgatatcttcagttgatctcagcaacatcacccgcatatcgatccactg 17183337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 18237772 - 18237689
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  ||||||| || ||||||||||||| |||||||||||||||||| |||| |||| ||||||||||    
T  18237772 ctaatgacgatcttctggcggaatcaaactgttgatgatatcttcagttgatctcagcaacgttacccgcataccgatccactg 18237689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 20564967 - 20564884
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||| | |  ||||||| |||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||    
T  20564967 ctaatgacgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactg 20564884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 40588757 - 40588674
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  |||||||| | ||||||||||||| ||||||||||| |||||| |||| |||||||||||||||    
T  40588757 ctaatgacgatcttctggccgaatcaagttgttgatgatatcttcagttgatctcaacaacgttacccgcatatcgatccactg 40588674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 48220743 - 48220826
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||| | || |||||||||| ||||||||||||| |||||||||||||| |||||||  ||||| |||||||||    
T  48220743 ctaatgacgatcttatggtggaatcaagctgttgatgatatcttcagttgatctcagcaccgtcacctgcatattgatccactg 48220826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 186
Target Start/End: Complemental strand, 30360724 - 30360643
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
    |||||||||||||||| |  ||||||| ||||| |||||||||| ||||||||||||||||| ||||| |||||| |||||||    
T  30360724 ctaatgacgatcttctggcggaatcaaactttttatgatatcttcagttgatctcagcaacg-cacccgcatatcaatccact 30360643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 94 - 186
Target Start/End: Original strand, 1642576 - 1642668
Alignment:
Q  94 cattccgtacctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
    |||||| |||||||| |||||||||| |  ||||||| || ||||| ||||||| ||||||||||| |||||| || | ||||||||||||||    
T  1642576 cattccctacctaatcacgatcttctggcggaatcaaactgttgataatatcttcagttgatctcaacaacgttacacgcatatcgatccact 1642668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 124 - 187
Target Start/End: Complemental strand, 17839511 - 17839448
Alignment:
Q  124 gaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||||||| |||||||||||||||| | ||||||| |||||| |||||| |||||||||||||||    
T  17839511 gaatcaaacttttgatgatatcttcaattgatctaagcaacttcacccgcatatcgatccactg 17839448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 45363251 - 45363313
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgt 166  Q
    |||||||||||||||| |  |||||||| | ||||||||||||| ||||||||||||||||||    
T  45363251 ctaatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatctcagcaacgt 45363313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 105 - 187
Target Start/End: Complemental strand, 47269105 - 47269023
Alignment:
Q  105 taatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||||||||||||| | |  |||||||  | |||||||||| ||||||| ||||||||||||| |||| |||||||||||||||    
T  47269105 taatgacgatcttttggcggaatcaaattgttgatgatatttttagttaatctcagcaacgttacccgcatatcgatccactg 47269023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 96 - 184
Target Start/End: Complemental strand, 2356505 - 2356417
Alignment:
Q  96 ttccgtacctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatcca 184  Q
    |||| |||||||| ||| |||| |||  |||||||  ||||||||||||||| ||||||||||| |||||| || | ||||||||||||    
T  2356505 ttccctacctaatcacggtcttatagcggaatcaaatttttgatgatatcttcagttgatctcaacaacgttactcgcatatcgatcca 2356417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 185
Target Start/End: Complemental strand, 10523352 - 10523196
Alignment:
Q  26 ccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttga 125  Q
    |||| |||||| ||||||||||||||| |||||||||||||| |||| |||||| |  ||  | ||  | | || || ||||||||||| |||  |  ||    
T  10523352 ccttttgtttgacaagtttgaattaccacattcaaaggaagacaattgttgtagttggaa--tacac-cttaccctaactaatgacgattttcaggcgga 10523256  T
Q  126 atcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccac 185  Q
    ||||| ||||||||||||| || ||||||||| || ||| |||||| |||||||||||||    
T  10523255 atcaaacttttgatgatatattcagttgatctaagaaacttcacccgcatatcgatccac 10523196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 143 - 187
Target Start/End: Original strand, 28979060 - 28979104
Alignment:
Q  143 atctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||    
T  28979060 atcttcagttgatctcagcaacgtcacccgcatatcgatccactg 28979104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 181
Target Start/End: Complemental strand, 11824911 - 11824824
Alignment:
Q  94 cattccgtacctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgat 181  Q
    |||||| |||||||| ||||||||||||  ||||||| || ||||  ||||||| |||||||||| ||||||| ||  ||||||||||    
T  11824911 cattccctacctaatcacgatcttctagcggaatcaaactgttgaaaatatcttcagttgatctctgcaacgtgacatacatatcgat 11824824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 21186904 - 21186938
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagataatt 72  Q
    |||||||||||||||||||||||||||||||||||    
T  21186904 caagtttgaattaccccattcaaaggaagataatt 21186938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 26601777 - 26601839
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgt 166  Q
    |||||||||||||||| |  ||||||| || ||||||||||||| ||||||||||| ||||||    
T  26601777 ctaatgacgatcttctggcggaatcaaactattgatgatatcttcagttgatctcaacaacgt 26601839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 80
Target Start/End: Original strand, 20877979 - 20878027
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagc 80  Q
    ||||||||||||||||||||||||| |||||||| | |||| |||||||    
T  20877979 gtttggcaagtttgaattaccccatccaaaggaacacaattgttgtagc 20878027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 164
Target Start/End: Original strand, 17320137 - 17320260
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaagcttttg 137  Q
    |||||||||||||||||||| ||||||||| |||| |||||| |  ||  ||||  | | || || ||||||||||| || | |  ||||||| ||||||    
T  17320137 caagtttgaattaccccatttaaaggaagacaattgttgtagttggaa--tgca-ccttaccctaactaatgacgattttatggcagaatcaaacttttg 17320233  T
Q  138 atgatatctttagttgatctcagcaac 164  Q
    |||||||||| ||||||||| ||||||    
T  17320234 atgatatcttaagttgatctaagcaac 17320260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 20378702 - 20378785
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||||||| |||||||| |  |||||||| | || || ||||||| |||||||||||||||| |||||| ||||||  |||||||    
T  20378702 ctaatgatgatcttctggcggaatcaagttgttaattatatcttcagttgatctcagcaacatcacccgcatatctgtccactg 20378785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 36393430 - 36393464
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagataatt 72  Q
    |||||||||||||||||||||||||||||| ||||    
T  36393430 caagtttgaattaccccattcaaaggaagacaatt 36393464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 42 - 79
Target Start/End: Complemental strand, 21651148 - 21651111
Alignment:
Q  42 tttgaattaccccattcaaaggaagataattattgtag 79  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  21651148 tttgaattacctcattcaaaggaagacaattattgtag 21651111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 19 - 94
Target Start/End: Original strand, 34353346 - 34353423
Alignment:
Q  19 ttggagaccttctgtttggcaagtttgaa-ttaccccattcaaa-ggaagataattattgtagctaaaaggtgcattc 94  Q
    |||||| ||| |||||| ||||||||||| |||||||||||||| | ||||||||||||| || | |||||| |||||    
T  34353346 ttggagtcctgctgtttagcaagtttgaatttaccccattcaaatgtaagataattattgcagttgaaaggtacattc 34353423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 10224541 - 10224589
Alignment:
Q  16 atattggagaccttctgtttggcaagtttgaa-ttaccccattcaaagg 63  Q
    ||||||||| ||| ||| |||||||||||||| ||||||||||||||||    
T  10224541 atattggagtcctgctgcttggcaagtttgaatttaccccattcaaagg 10224589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 185
Target Start/End: Complemental strand, 28066466 - 28066382
Alignment:
Q  101 tacctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccac 185  Q
    |||||||| ||||| |||| |  ||||||| |||||||  ||||||| ||  |||||||||||||| ||  ||||||||||||||    
T  28066466 tacctaatcacgatgttctggcggaatcaaacttttgagaatatcttcagacgatctcagcaacgtgacaaacatatcgatccac 28066382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 122; Significance: 9e-63; HSPs: 67)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 55206793 - 55206966
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||| ||||||| | ||||| |||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  55206793 gaatattagagacctgccgtttgacaagtttgtattaccccattcaaaggaagacaattgttgtagctaaaaggtgcattcattccgtacctaatgacga 55206892  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| |  ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  55206893 tcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 55206966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 121; E-Value: 3e-62
Query Start/End: Original strand, 14 - 186
Target Start/End: Complemental strand, 2428797 - 2428625
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||| | |||| |||||||| |||||||||||||||  ||||||||||||||    
T  2428797 gaatattggagacctgccgtttggcaagtttgaattaccccattcaaaggaacacaattgttgtagctgaaaggtgcattcattatgtacctaatgacga 2428698  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
    ||||||||  ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  2428697 tcttctagcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccact 2428625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 41804212 - 41804039
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||    
T  41804212 gaatattggagaccttccgtttggcaagtttgaattaccccattcaaaggaagacaattgttgtagctaaaaagtgcattcattccgtacctaatgacga 41804113  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| |  ||||||| |||||||| ||||||| | ||||||||| ||||||||| | |||||||||||||||    
T  41804112 tcttctggcggaatcaaacttttgattatatcttcatttgatctcatcaacgtcactctcatatcgatccactg 41804039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 51013187 - 51013360
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||| ||||||||  ||||||||||||||||||||||||||||||    
T  51013187 gaatattggagacctgccgtttggcaagtttgaattaccccattcaaaggaagacaattgttgtagctggaaggtgcattcattccgtacctaatgacga 51013286  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| |  ||||||| |||||||||||||||| ||||||||| ||||||||||||| ||||||||| |||||    
T  51013287 tcttctggcggaatcaaacttttgatgatatcttcagttgatcttagcaacgtcacccgcatatcgatacactg 51013360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 116; E-Value: 3e-59
Query Start/End: Original strand, 14 - 181
Target Start/End: Original strand, 52569318 - 52569485
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||    
T  52569318 gaatattggagacctgccgtttggcaagtttgaattaccccattcaaaggaagacaattgttgtagctaaaaggtgcattcattccgcacctaatgacga 52569417  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgat 181  Q
    |||||| |  ||||||| || ||||||||||||| ||||||||||||||| ||||||| |||||||||    
T  52569418 tcttctggcggaatcaaactcttgatgatatcttcagttgatctcagcaatgtcacccgcatatcgat 52569485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 41578216 - 41578043
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||||||| | ||||||||||||||||||||| |||||||||||||| |||| |||||||| |||||||||||||||||||||||||||| ||    
T  41578216 gaatattggagacctgccgtttggcaagtttgaattaccacattcaaaggaagacaattgttgtagctgaaaggtgcattcattccgtacctaatgatga 41578117  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| |  ||||||| |||||||||||||||| ||||||||||||||||||||| | ||||| |||||||||    
T  41578116 tcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcactcgcatattgatccactg 41578043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 46346521 - 46346694
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||||||| | |||||||||||||||||||||| ||||||||||||| |||| ||||||||  |||||||||||||||||||| ||||||| |    
T  46346521 gaatattggagacctgccgtttggcaagtttgaattacccaattcaaaggaagacaattgttgtagctggaaggtgcattcattccgtacataatgacaa 46346620  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| |  ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  46346621 tcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 46346694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 111; E-Value: 3e-56
Query Start/End: Original strand, 32 - 186
Target Start/End: Original strand, 46414261 - 46414415
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    |||||||||||||||| |||| |||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||||||||| |  |||||||     
T  46414261 gtttggcaagtttgaactaccacattcaaaggaagacaattgttgtagctagaaggtgcattcattccgtacctaatgacgatcttctggcggaatcaaa 46414360  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  46414361 cttttgatgatatcttaagttgatctcagcaacgtcacccgcatatcgatccact 46414415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 32 - 187
Target Start/End: Original strand, 42323316 - 42323471
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    ||||| |||||||||||||||||||||| ||||||| |||| ||||||||  ||||||||||||||| ||||||||||||||||||| ||| |||||||     
T  42323316 gtttgccaagtttgaattaccccattcagaggaagacaattgttgtagctggaaggtgcattcattcagtacctaatgacgatcttccagtggaatcaaa 42323415  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| ||||||||||||||||||||||  |||||||||||||||    
T  42323416 cttttgatgatatcttcagttgatctcagcaacgtcaccagcatatcgatccactg 42323471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 32 - 186
Target Start/End: Complemental strand, 30192830 - 30192676
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    |||||||||||||||| |||| |||||||||||||| |||| |||||| |  |||||||||||||||||||||||||||||||||||| |  |||||||     
T  30192830 gtttggcaagtttgaaatacctcattcaaaggaagaaaattgttgtagttggaaggtgcattcattccgtacctaatgacgatcttctggcggaatcaaa 30192731  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  30192730 cttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccact 30192676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 7246404 - 7246231
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||||||| |  ||||||||||||||||||||||||||||||||||| |||  ||||||||  |||||||||| ||||| |||||||||||||    
T  7246404 gaatattggagacctgccatttggcaagtttgaattaccccattcaaaggaagacaatcgttgtagctggaaggtgcatttattccatacctaatgacga 7246305  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| |  ||||||| |||||||||||||||| ||||||||| ||||||||||||| ||||||||| |||||    
T  7246304 tcttctggcggaatcaaacttttgatgatatcttcagttgatctaagcaacgtcacccgcatatcgatacactg 7246231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 102; E-Value: 7e-51
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 51015587 - 51015414
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||| ||| | |||||||||||| |||||||||||||||||| |||| |||| ||||||||  ||||||||||||||| ||||||||||||||    
T  51015587 gaatattggagtcctgccgtttggcaagttcgaattaccccattcaaagaaagacaattgttgtagctggaaggtgcattcattcggtacctaatgacga 51015488  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| |  ||||||| |||||||||||||||| ||||||||||||||||||  ||| |||||||||||||||    
T  51015487 tcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtttcccgcatatcgatccactg 51015414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 32 - 187
Target Start/End: Original strand, 34472003 - 34472158
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||  ||||  ||||||||| |||||||||||||||||||| |  |||| ||     
T  34472003 gtttggcaagtttgaattaccccattcaaaggaagacaatttttgtagctggaaggaacattcattcggtacctaatgacgatcttctggcggaataaaa 34472102  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  34472103 cttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 34472158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 32 - 187
Target Start/End: Original strand, 45100392 - 45100547
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    ||||||||||||||||||||||||||||||| |||| |||| | |||||||||| |||||||||||| ||||||||||||||| || | |  |||||||     
T  45100392 gtttggcaagtttgaattaccccattcaaagaaagacaattgtagtagctaaaaagtgcattcattcagtacctaatgacgatattatggcggaatcaaa 45100491  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  45100492 cttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 45100547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 32 - 187
Target Start/End: Complemental strand, 14631737 - 14631582
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    ||||||||||||||||||||||| |||||||||||| | || ||||||||  | ||||||||||||| |||||||||||||||||||| |  |||||||     
T  14631737 gtttggcaagtttgaattaccccgttcaaaggaagacagttgttgtagctggatggtgcattcattcggtacctaatgacgatcttctggcagaatcaaa 14631638  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||| ||||||||    
T  14631637 cttttgatgatatctttagttgatctcaacaacgtcacccgcatatcaatccactg 14631582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 43570220 - 43570047
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||||| | | ||||||||||||||||||||| |||||||||||||| |||| ||||||||  |||||||| ||||||||||| ||| |||||    
T  43570220 gaatattggagacgtgccgtttggcaagtttgaattacctcattcaaaggaagacaattgttgtagctggaaggtgcagtcattccgtacataaagacga 43570121  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| |   |||||| |||||||||||||||| | |||||||||||||||| |||| |||||||||||||||    
T  43570120 tcttctggcgaaatcaaacttttgatgatatcttcaattgatctcagcaacgttacccgcatatcgatccactg 43570047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 38 - 187
Target Start/End: Original strand, 34647200 - 34647349
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaagcttttg 137  Q
    |||||| |||||||| |||||| ||||||| |||| ||| ||||| ||||||||||||||| ||||||||||||||||||||||   |||||| ||||||    
T  34647200 caagttcgaattaccacattcagaggaagacaattgttgcagctagaaggtgcattcattcggtacctaatgacgatcttctagcgtaatcaaacttttg 34647299  T
Q  138 atgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||| ||||||||||||||||||||||| |||||| ||||||||    
T  34647300 atgatatcttcagttgatctcagcaacgtcacccgcatatcaatccactg 34647349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 32 - 187
Target Start/End: Complemental strand, 7954496 - 7954341
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    ||||||||||||||||||||| |||||||||||||| |||| |||||| || ||||||||||||||||||||||||||||||||||||||  ||||||      
T  7954496 gtttggcaagtttgaattacctcattcaaaggaagacaattgttgtagttagaaggtgcattcattccgtacctaatgacgatcttctagcggaatcaga 7954397  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
     | ||||| ||||||| ||||||||| |||||| | |||| |||||||||||||||    
T  7954396 ttgttgataatatcttcagttgatcttagcaactttacccgcatatcgatccactg 7954341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 32 - 187
Target Start/End: Complemental strand, 37281744 - 37281589
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    ||||| ||||||||||||||| ||| || ||||| | |||| |||||| |  ||||||||||||||| |||||||||||||||||||| |  |||| ||     
T  37281744 gtttgacaagtttgaattacctcatccataggaacacaattgttgtagtttgaaggtgcattcattcggtacctaatgacgatcttctggcggaattaaa 37281645  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||||||||||||||||  |||||||||||||||||||||| |||||||||||||||    
T  37281644 cttttgatgatatcttccgttgatctcagcaacgtcacccgcatatcgatccactg 37281589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 77; E-Value: 6e-36
Query Start/End: Original strand, 35 - 187
Target Start/End: Complemental strand, 49273688 - 49273536
Alignment:
Q  35 tggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaagctt 134  Q
    ||||| |||||||||||| |||||||||||||| |||| | ||||||  ||||||| ||||||| | ||||||||||||| |||| |  ||||||| |||    
T  49273688 tggcatgtttgaattaccacattcaaaggaagacaattgtggtagctggaaggtgcgttcattcaggacctaatgacgatattctggaagaatcaaactt 49273589  T
Q  135 ttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||| || ||||||||||||||||||||||||||||| |||| ||||    
T  49273588 ttgatgatatattcagttgatctcagcaacgtcacccacatattgatcaactg 49273536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 32 - 186
Target Start/End: Original strand, 36721316 - 36721470
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    ||||||| ||||||||||||| ||| || ||||| | |||| |||||| |  |||||||||||||||  |||| |||||||||||||| |  |||||||     
T  36721316 gtttggctagtttgaattacctcatccagaggaacacaattgttgtaggtggaaggtgcattcattcgataccaaatgacgatcttctggcggaatcaaa 36721415  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
    |||||||||||||||| ||||||||||||||||||||||  ||||||||||||||    
T  36721416 cttttgatgatatcttcagttgatctcagcaacgtcaccagcatatcgatccact 36721470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 69 - 187
Target Start/End: Original strand, 10053239 - 10053356
Alignment:
Q  69 aattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtca 168  Q
    |||| ||||||||  ||||||||||||||| |||||||||||||||||||| |  ||||||| ||||||||||||| || ||||||||||||||||||||    
T  10053239 aattgttgtagctggaaggtgcattcattcagtacctaatgacgatcttctggcggaatcaaacttttgatgatat-ttcagttgatctcagcaacgtca 10053337  T
Q  169 cccacatatcgatccactg 187  Q
    ||| |||||||||||||||    
T  10053338 cccgcatatcgatccactg 10053356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 13895869 - 13895952
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  13895869 ctaatgacgatcttctagcggaatcaagcttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 13895952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 93 - 187
Target Start/End: Original strand, 47759879 - 47759973
Alignment:
Q  93 tcattccgtacctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| |||||||||||||||||||| |  ||||||| ||||||||||||||||||||||||||||||||||||||||  | ||||||||||||    
T  47759879 tcattcggtacctaatgacgatcttctggcggaatcaaacttttgatgatatctttagttgatctcagcaacgtcacccgtacatcgatccactg 47759973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 104 - 184
Target Start/End: Original strand, 19453228 - 19453308
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatcca 184  Q
    ||||||| |||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  19453228 ctaatgatgatcttctggtggaatcaaacttttgatgatatctttagttgatctcagcaacgtcacccgcatatcgatcca 19453308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 105 - 187
Target Start/End: Original strand, 48087552 - 48087634
Alignment:
Q  105 taatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||||||||||||||| || |||||||||| ||||||||||||| |||||||||||||||||| |||| |||||||||||||||    
T  48087552 taatgacgatcttctggtggaatcaagctgttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactg 48087634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 69 - 187
Target Start/End: Original strand, 50458655 - 50458773
Alignment:
Q  69 aattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtca 168  Q
    |||| ||||||||  ||||||||||| ||| |||||||||||||||||||  |  ||||||| |||||||||||||||| |||| |||||| ||||||||    
T  50458655 aattgttgtagctggaaggtgcattcgttcggtacctaatgacgatcttcaggcggaatcaaacttttgatgatatcttcagtttatctcaacaacgtca 50458754  T
Q  169 cccacatatcgatccactg 187  Q
    ||| |||||| ||||||||    
T  50458755 cccgcatatctatccactg 50458773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 31 - 187
Target Start/End: Original strand, 2268423 - 2268576
Alignment:
Q  31 tgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaa 130  Q
    |||||| |||||||||||||||||||||||||||||| |||| |||||| |  ||  ||||  | | || || |||||||||||||||| |  |||||||    
T  2268423 tgtttgacaagtttgaattaccccattcaaaggaagacaattgttgtagttggaa--tgcac-cttaccctaactaatgacgatcttctggcggaatcaa 2268519  T
Q  131 gcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
     |||||||||||||||| ||||||||| |||||| |||||| |||||||||| ||||    
T  2268520 acttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatctactg 2268576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 31 - 187
Target Start/End: Original strand, 2646805 - 2646958
Alignment:
Q  31 tgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaa 130  Q
    |||||| || ||||||||||||||||||||| ||||| |||| |||||| |  ||  ||||  | | || || ||||||||||||||||||  |||||||    
T  2646805 tgtttgacaggtttgaattaccccattcaaatgaagacaattgttgtagttggaa--tgcac-cttaccctaactaatgacgatcttctagcggaatcaa 2646901  T
Q  131 gcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
     |||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||    
T  2646902 acttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactg 2646958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 31 - 187
Target Start/End: Original strand, 4004016 - 4004169
Alignment:
Q  31 tgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaa 130  Q
    |||||| |||||||||||||||||||||||||||||| |||| |||||| |  || |  | || | ||  || |||||||||||||||| |  |||||||    
T  4004016 tgtttgacaagtttgaattaccccattcaaaggaagacaattgttgtagttggaatgcacctt-actc--taactaatgacgatcttctggcagaatcaa 4004112  T
Q  131 gcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
     |||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||    
T  4004113 acttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactg 4004169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 24702271 - 24702354
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  |||||||||||||||||||||||| ||||||||||| ||||||||||  |||||||||||||||    
T  24702271 ctaatgacgatcttctggcggaatcaagcttttgatgatatcttcagttgatctcaacaacgtcacctgcatatcgatccactg 24702354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 34693289 - 34693372
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  |||||||  ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  34693289 ctaatgacgatcttctggcggaatcaaagttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 34693372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 44927683 - 44927600
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  ||||||| |||||||||||||||| ||||||||||| ||||||||||| |||||||||||||||    
T  44927683 ctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcaacaacgtcacccgcatatcgatccactg 44927600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 14 - 96
Target Start/End: Original strand, 55268769 - 55268851
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcat 96  Q
    |||||||||||||||   ||||||||||||||||||||| |||||||||||||| |||| || ||||||||||||||||||||    
T  55268769 gaatattggagacctgtcgtttggcaagtttgaattacctcattcaaaggaagacaattgttatagctaaaaggtgcattcat 55268851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 94 - 187
Target Start/End: Original strand, 774327 - 774420
Alignment:
Q  94 cattccgtacctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| |||||||| |||||||||| || ||||||  || ||||||||||||| |||||||||||||||||| |||| |||||||||||||||    
T  774327 cattccctacctaatcacgatcttctggtggaatcagactcttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactg 774420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 39 - 187
Target Start/End: Original strand, 3494966 - 3495111
Alignment:
Q  39 aagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaagcttttga 138  Q
    ||||||||||||||||||||||||||||| |||| |||||| |  ||  ||||  | | || || |||||||||||||||| |  ||||||| |||||||    
T  3494966 aagtttgaattaccccattcaaaggaagacaattgttgtagttggaa--tgcac-cttaccctaactaatgacgatcttctggcagaatcaaacttttga 3495062  T
Q  139 tgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||||||||| ||||||||| | |||| |||||| |||||||||||||||    
T  3495063 tgatatcttaagttgatctaaacaacttcacccgcatatcgatccactg 3495111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 31 - 187
Target Start/End: Complemental strand, 36135297 - 36135144
Alignment:
Q  31 tgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaa 130  Q
    |||||| |||||||||||||||||||||||||||||| |||| |||||| |  ||  ||||| | | |  || |||||||| ||||||| |  |||||||    
T  36135297 tgtttgacaagtttgaattaccccattcaaaggaagacaattgttgtagttggaa--tgcat-cttactctaactaatgacaatcttctggcggaatcaa 36135201  T
Q  131 gcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
     |||||||||||||||| ||||||||| |||||| |||||| |||||||||| ||||    
T  36135200 acttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatctactg 36135144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 39416947 - 39417030
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |   ||||||||| ||||||||||||| |||||||||||||||||| |||| |||||||||||||||    
T  39416947 ctaatgacgatcttctggcgaaatcaagctattgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactg 39417030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 49610709 - 49610626
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  |||||||| | ||||||||||||| ||||||||||||||||||||||| |||||||| ||||||    
T  49610709 ctaatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgacccactg 49610626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 51695605 - 51695688
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||||||| |||||||| |  |||||||| | ||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  51695605 ctaatgatgatcttctggcggaatcaagttgttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 51695688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 101 - 187
Target Start/End: Complemental strand, 18440968 - 18440882
Alignment:
Q  101 tacctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||| |||||||||| || ||||||| || ||||| ||||||| |||||||||||||||||| || |||||||||||||||||    
T  18440968 tacctaatcacgatcttctggtggaatcaaactgttgataatatcttcagttgatctcagcaacgttacacacatatcgatccactg 18440882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 101 - 187
Target Start/End: Complemental strand, 19486042 - 19485956
Alignment:
Q  101 tacctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||| |||||||||| || ||||||| || ||||| ||||||| |||||||||||||||||| || |||||||||||||||||    
T  19486042 tacctaatcacgatcttctggtggaatcaaactgttgataatatcttcagttgatctcagcaacgttacacacatatcgatccactg 19485956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 31 - 187
Target Start/End: Complemental strand, 34050017 - 34049864
Alignment:
Q  31 tgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaa 130  Q
    |||||| ||||||||||||||| |||||||||||| | |||| |||||| |  ||  ||||  | | || || |||||||||||||| | |  |||||||    
T  34050017 tgtttgacaagtttgaattacctcattcaaaggaatacaattgttgtagttggaa--tgcac-cttaccctaactaatgacgatcttgtggcggaatcaa 34049921  T
Q  131 gcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
     |||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||    
T  34049920 acttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactg 34049864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 31 - 187
Target Start/End: Original strand, 49139983 - 49140136
Alignment:
Q  31 tgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaa 130  Q
    |||||| ||||||||||||||| |||||||||||| | |||| |||||| |  ||  ||||  | | || || |||||||||||||| | |  |||||||    
T  49139983 tgtttgacaagtttgaattacctcattcaaaggaatacaattgttgtagttggaa--tgcac-cttaccctaactaatgacgatcttgtggcggaatcaa 49140079  T
Q  131 gcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
     |||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||    
T  49140080 acttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactg 49140136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 31 - 187
Target Start/End: Complemental strand, 50997678 - 50997525
Alignment:
Q  31 tgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaa 130  Q
    |||||| |||||||||||||||||||||||| ||| | |||| |||||| |  ||  ||||  | | || || |||||||||||||||| |  |||||||    
T  50997678 tgtttgacaagtttgaattaccccattcaaaagaatacaattgttgtagttggaa--tgcac-cttaccctaactaatgacgatcttctggcggaatcaa 50997582  T
Q  131 gcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
     |||||||||||||||| ||||||||| |||||| |||||| |||||||||| ||||    
T  50997581 acttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatcaactg 50997525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 31 - 187
Target Start/End: Complemental strand, 54390732 - 54390579
Alignment:
Q  31 tgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaa 130  Q
    |||||| ||||||||||||||| |||||||||||| | |||| |||||| |  ||  ||||  | | || || |||||||||||||| | |  |||||||    
T  54390732 tgtttgacaagtttgaattacctcattcaaaggaatacaattgttgtagttggaa--tgcac-cttaccctaactaatgacgatcttgtggcggaatcaa 54390636  T
Q  131 gcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
     |||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||    
T  54390635 acttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactg 54390579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 105 - 184
Target Start/End: Original strand, 25576592 - 25576671
Alignment:
Q  105 taatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatcca 184  Q
    |||||||||||||||    |||||||||| ||||||||||||| |||||||||||||||||| |||| ||||||||||||    
T  25576592 taatgacgatcttctgacggaatcaagctattgatgatatcttcagttgatctcagcaacgttacccgcatatcgatcca 25576671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 42382491 - 42382408
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  |||||||  | ||||||||||||| |||||||||||||||||| |||| |||||||||||||||    
T  42382491 ctaatgacgatcttctggcggaatcaacttgttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactg 42382408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 42383271 - 42383188
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  |||||||  | ||||||||||||| |||||||||||||||||| |||| |||||||||||||||    
T  42383271 ctaatgacgatcttctggcggaatcaacttgttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactg 42383188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 42950019 - 42950102
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  |||||||| | ||||||||||||| |||||||||||||||||| | || |||||||||||||||    
T  42950019 ctaatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatctcagcaacgtaaaccgcatatcgatccactg 42950102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 46403223 - 46403140
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||| | |  ||||||| |||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||    
T  46403223 ctaatgacgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactg 46403140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 49218735 - 49218818
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  |||||||| | ||||| ||||||| ||||||||||||||||||||| | |||||||||||||||    
T  49218735 ctaatgacgatcttctggcggaatcaagttgttgataatatcttcagttgatctcagcaacgtcactcgcatatcgatccactg 49218818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 104 - 186
Target Start/End: Complemental strand, 47065907 - 47065825
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
    |||||||||||||||| |  |||||||| | || |||||||||| |||||||||||||||||| |||| ||||||||||||||    
T  47065907 ctaatgacgatcttctggcggaatcaagttgttaatgatatcttcagttgatctcagcaacgttacccgcatatcgatccact 47065825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 162
Target Start/End: Original strand, 33449082 - 33449208
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    ||||| ||||||||||||||||||| || ||||| | |||| |||||| |  |||||||||||    | |||||||| |||||||||| |  |||||||     
T  33449082 gtttgacaagtttgaattaccccatccagaggaaaacaattgttgtagttggaaggtgcattc----cctacctaattacgatcttctggcggaatcaaa 33449177  T
Q  132 cttttgatgatatctttagttgatctcagca 162  Q
    |||| ||||||||||| ||||||||||||||    
T  33449178 ctttggatgatatcttcagttgatctcagca 33449208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 38 - 187
Target Start/End: Original strand, 6464280 - 6464427
Alignment:
Q  38 caagtttgaattaccccatt-caaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaagctttt 136  Q
    |||||||||||||||||||| || || |||| | || |||||| |  ||||||||||   ||| ||  |||| |||||||||| |  ||||||  || ||    
T  6464280 caagtttgaattaccccatttcagagtaagagagttgttgtagttggaaggtgcatt---tccctatataatcacgatcttcttgcagaatcagactgtt 6464376  T
Q  137 gatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||| ||||||| |||||||||||||||||| ||||||||||||||||||||    
T  6464377 gataatatcttcagttgatctcagcaacgttacccacatatcgatccactg 6464427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 38 - 182
Target Start/End: Complemental strand, 6754488 - 6754346
Alignment:
Q  38 caagtttgaattaccccatt-caaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaagctttt 136  Q
    |||||||||||||||||||| || || |||| | || |||||| |  ||||||||||   ||| ||| |||| ||||||||||||  ||||||  || ||    
T  6754488 caagtttgaattaccccatttcagagtaagacagttgttgtagttggaaggtgcatt---tccctacataatcacgatcttctagcagaatcagactgtt 6754392  T
Q  137 gatgatatctttagttgatctcagcaacgtcacccacatatcgatc 182  Q
    ||| ||||||| |||||||||||||||||| |||| ||||||||||    
T  6754391 gataatatcttcagttgatctcagcaacgttacccgcatatcgatc 6754346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 32 - 187
Target Start/End: Original strand, 8633292 - 8633441
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    ||||| ||||||||||||||| |||||||||||||| |||| |||||| |    |||||||||     |||||||||||||||||||| |  ||||||      
T  8633292 gtttgacaagtttgaattacctcattcaaaggaagacaattgttgtagttgg--ggtgcattcg----gtacctaatgacgatcttctggcggaatcaga 8633385  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    || ||||| ||||||| || ||||| || |||||| |||| |||||||||||||||    
T  8633386 ctgttgataatatcttcagatgatcgcaacaacgttacccgcatatcgatccactg 8633441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 37282118 - 37282039
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatctt 117  Q
    |||||||||||||||||||||||||||| | |||| ||| || |  ||||||||||||||||||||||| | ||||||||    
T  37282118 caagtttgaattaccccattcaaaggaaaacaattgttgcagttggaaggtgcattcattccgtacctactaacgatctt 37282039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 105 - 187
Target Start/End: Complemental strand, 43477276 - 43477194
Alignment:
Q  105 taatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||||||||||||||| |  |||||||| | |||||||||||||  |||||||||| ||||||||||  |||||||||||||||    
T  43477276 taatgacgatcttctggcggaatcaagttgttgatgatatcttcggttgatctcatcaacgtcacctgcatatcgatccactg 43477194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 104 - 184
Target Start/End: Original strand, 53826695 - 53826775
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatcca 184  Q
    |||||||||||||||| |  |||||||| | ||||||||||||| |||||||||||||||||| ||   ||||||||||||    
T  53826695 ctaatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatctcagcaacgttacatgcatatcgatcca 53826775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 36720942 - 36721021
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatctt 117  Q
    ||||||||||||||| |||||||||||||| |||| ||| || | ||||||| ||||||| |||||||| |||| |||||    
T  36720942 caagtttgaattacctcattcaaaggaagacaattgttgcagttgaaaggtgaattcatttcgtacctactgacaatctt 36721021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 27187137 - 27187088
Alignment:
Q  135 ttgatgatatctttagttgatctcagcaacgtcacccacatatcgatcca 184  Q
    ||||| |||||||||||||||||||||||||| |||| ||||||||||||    
T  27187137 ttgataatatctttagttgatctcagcaacgttacccgcatatcgatcca 27187088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 44835486 - 44835569
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||||||||||||||||    |||||||||| |||||||||| || ||||||||||| |||| | |||| |||||| ||||||||    
T  44835486 ctaatgacgatcttctgacggaatcaagctgttgatgatattttcagttgatctcaacaaccttacccgcatatccatccactg 44835569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 38 - 77
Target Start/End: Complemental strand, 14632059 - 14632020
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagataattattgt 77  Q
    |||||||||||||||||||||||||||||| |||| ||||    
T  14632059 caagtttgaattaccccattcaaaggaagacaattgttgt 14632020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 43570524 - 43570490
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagataatt 72  Q
    |||||||||||||||||||||||||||||| ||||    
T  43570524 caagtttgaattaccccattcaaaggaagacaatt 43570490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 45100080 - 45100114
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagataatt 72  Q
    |||||||||||||||||||||||||||||| ||||    
T  45100080 caagtttgaattaccccattcaaaggaagacaatt 45100114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 27187599 - 27187558
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagataattattgtag 79  Q
    ||||||||||||||| |||||||||||||| |||| ||||||    
T  27187599 caagtttgaattacctcattcaaaggaagacaattgttgtag 27187558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 122; Significance: 9e-63; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 38046344 - 38046517
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    |||||||||||||||   |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  38046344 gaatattggagacctgtcgtttggcaagtttgaattaccccattcaaaggaagacaattgttgtagctaaaaggtgcattcattccgtacctaatgacga 38046443  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| || ||||||| |||||||||||||||| ||||||||||||||||||||||  ||||| |||| ||||    
T  38046444 tcttctggtggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcaccggcatattgatcgactg 38046517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 122; E-Value: 9e-63
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 49926290 - 49926463
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||||||| |  ||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||||||||||||||||||||    
T  49926290 gaatattggagacctgccatttggcaagtttgaattaccccattcaaaggaagacaatggttgtagctaaaaggtgcattcattccgtacctaatgacga 49926389  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| |  ||||||| |||||||||||||||| ||||||||||||||||||||||  |||||||||||||||    
T  49926390 tcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacctgcatatcgatccactg 49926463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 6436068 - 6435895
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||||||| | ||||||||||||||||||||| |||||||||||||| |||| ||||||||  ||||||||||||||||||||||||||||||    
T  6436068 gaatattggagacctgccgtttggcaagtttgaattacctcattcaaaggaagacaattgttgtagctggaaggtgcattcattccgtacctaatgacga 6435969  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| |  ||||||| |||||||||||||||| | ||||||||| ||||||||| |||||||||||||||||    
T  6435968 tcttctggcggaatcaaacttttgatgatatcttcacttgatctcaacaacgtcactcacatatcgatccactg 6435895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 32 - 187
Target Start/End: Original strand, 14173686 - 14173841
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||  ||||||||||||| |||||||||||||||||||||| |  |||||||     
T  14173686 gtttggcaagtttgaattaccccattcaaaggaagacaattgttgtagctggaaggtgcattcataccgtacctaatgacgatcttctggcggaatcaaa 14173785  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  14173786 cttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 14173841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 13973220 - 13973047
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||| ||||||||  ||||||||||||||||||||||||||||||    
T  13973220 gaatattggagacctgccgtttggcaagtttgaattaccccattcaaaggaagacaattgttgtagctggaaggtgcattcattccgtacctaatgacga 13973121  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||| | |  ||||||| |||||||||||||||| | ||||||||||||| ||||||| ||||| |||||||||    
T  13973120 tcttatggcggaatcaaacttttgatgatatcttcaattgatctcagcaatgtcacccgcatattgatccactg 13973047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 32 - 187
Target Start/End: Complemental strand, 36909839 - 36909684
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    |||||||||||||||||||||||||||||||||||| || | ||||||||  ||||||||||||||| |||||||||||||||||||| |  |||||||     
T  36909839 gtttggcaagtttgaattaccccattcaaaggaagacaactgttgtagctggaaggtgcattcattctgtacctaatgacgatcttctggcggaatcaaa 36909740  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  36909739 cttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 36909684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 32 - 187
Target Start/End: Complemental strand, 49396982 - 49396827
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||  |||||||||||||||| ||||||||||||||||||| |  |||||||     
T  49396982 gtttggcaagtttgaattaccccattcaaaggaagacaattgttgtagctggaaggtgcattcattccatacctaatgacgatcttctggcggaatcaaa 49396883  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| ||||||||| ||||||||||||||||||||||| |||||| ||||||||    
T  49396882 cttttgttgatatcttcagttgatctcagcaacgtcacccgcatatcaatccactg 49396827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 32 - 186
Target Start/End: Complemental strand, 23342919 - 23342765
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    |||||||||||||||||||||| ||||||||||||| |||| ||||||||  ||||||||||||||| |||||||||||||||||||| |  |||||||     
T  23342919 gtttggcaagtttgaattacccaattcaaaggaagacaattgttgtagctggaaggtgcattcattcggtacctaatgacgatcttctggaggaatcaaa 23342820  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
    |||||||||||||||| |||| ||||||||||||| |||| ||||||||||||||    
T  23342819 cttttgatgatatcttcagtttatctcagcaacgttacccgcatatcgatccact 23342765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 33 - 187
Target Start/End: Original strand, 24270292 - 24270446
Alignment:
Q  33 tttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaagc 132  Q
    ||||||||||||||||||||||||||| ||||||| |||| ||||||||  ||||||||||||||| ||||||| ||| |||||||| |  ||||||| |    
T  24270292 tttggcaagtttgaattaccccattcagaggaagacaattgttgtagctggaaggtgcattcattcggtacctattgatgatcttctggcggaatcaaac 24270391  T
Q  133 ttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  24270392 ttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 24270446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 37778375 - 37778202
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||  ||| | |||||||||||||||||||||||||||| ||||||| |||| ||||||    ||||||||||||||| ||||||||||||||    
T  37778375 gaatattggaatcctgccgtttggcaagtttgaattaccccattcagaggaagaaaattgttgtaggcggaaggtgcattcattcggtacctaatgacga 37778276  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| |  ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||    
T  37778275 tcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatcaactg 37778202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 4e-46
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 41780989 - 41780816
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||| ||| | |||||||||||||||||||||||||||||||||||| |||| ||||||||  ||||||||||||||||||||||||||||||    
T  41780989 gaatattggagtcctgccgtttggcaagtttgaattaccccattcaaaggaagacaattgttgtagctgcaaggtgcattcattccgtacctaatgacga 41780890  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
     ||||| |   |||||| ||||||||||||| || ||||||||| ||||||||||||  |||||| ||| ||||    
T  41780889 acttctggcgaaatcaaacttttgatgatatattcagttgatcttagcaacgtcacctgcatatctatctactg 41780816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 32 - 187
Target Start/End: Complemental strand, 35185249 - 35185094
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    ||||| ||||||||||||||| |||||||||||||| |||| ||||||||  ||||||||||||||||| |||||||||||||||||| |  |||||||     
T  35185249 gtttgacaagtttgaattacctcattcaaaggaagacaattgttgtagctggaaggtgcattcattccgcacctaatgacgatcttctggcggaatcaaa 35185150  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| | ||||| ||||||||||||||  |||||||||||||||    
T  35185149 cttttgatgatatcttcaattgatttcagcaacgtcacctgcatatcgatccactg 35185094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 32 - 187
Target Start/End: Original strand, 17686289 - 17686444
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    |||||||||||||||||||||| || || ||||| | |||| ||||||||  |||||||||||||||  ||||||||||||||||||| |  |||||||     
T  17686289 gtttggcaagtttgaattaccctatccagaggaacacaattgttgtagctggaaggtgcattcattcgatacctaatgacgatcttctggcggaatcaaa 17686388  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| ||||||||||||| ||||||||| |||||||||||||||    
T  17686389 cttttgatgatatcttcagttgatctcagctacgtcacccgcatatcgatccactg 17686444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 32 - 187
Target Start/End: Original strand, 35586859 - 35587012
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    |||||||||||||||||||||||||||||||||| | || | |||||| | ||||||||||||||||||||| ||||||||||||||| |  |||||||     
T  35586859 gtttggcaagtttgaattaccccattcaaaggaa-acaactgttgtagttgaaaggtgcattcattccgtac-taatgacgatcttctggcggaatcaaa 35586956  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| | ||||||||||||| ||||||| |||||||||||||||    
T  35586957 cttttgatgatatcttcaattgatctcagcaaggtcacccgcatatcgatccactg 35587012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 32 - 187
Target Start/End: Original strand, 40533214 - 40533369
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    ||||| |||||||||||||||||| | | ||||| | |||| ||||||||  ||||||||||||||| |||||||||||||||||||| |  |||| ||     
T  40533214 gtttgacaagtttgaattaccccagttagaggaaaacaattgttgtagctggaaggtgcattcattcggtacctaatgacgatcttctggcggaattaaa 40533313  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |||||||||| ||||||| |||| |||||||||||||||    
T  40533314 cttttgatgatatcttcagttgatctcggcaacgttacccgcatatcgatccactg 40533369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 32 - 187
Target Start/End: Original strand, 21484574 - 21484726
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    |||||||||||||||||||||  ||||||||||||| |||| |||||| |  ||  ||||  | | || ||||||||||||||||||| ||  ||||||     
T  21484574 gtttggcaagtttgaattaccatattcaaaggaagacaattgttgtagttggaa--tgcac-cttaccctacctaatgacgatcttctggtgaaatcaaa 21484670  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| ||||||||||||||||||||| | |||||||||||||||    
T  21484671 cttttgatgatatcttcagttgatctcagcaacgtcactcgcatatcgatccactg 21484726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 107 - 184
Target Start/End: Original strand, 29707544 - 29707621
Alignment:
Q  107 atgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatcca 184  Q
    |||||||||||||||  ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  29707544 atgacgatcttctagcggaatcaaacttttgatgatatctttagttgatctcagcaacgtcacccgcatatcgatcca 29707621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 32 - 187
Target Start/End: Complemental strand, 18170303 - 18170148
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    ||||||||||||||||||||| ||| || ||||| | ||   || ||| |  ||||||||| ||||| |||||||||||||||||||| |  |||||||     
T  18170303 gtttggcaagtttgaattacctcatccagaggaacacaaaagttttagttggaaggtgcatgcattcggtacctaatgacgatcttctggcggaatcaaa 18170204  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    | |||||||||||||| |||||| |||||||| ||||||| |||||||||| ||||    
T  18170203 cctttgatgatatcttcagttgagctcagcaatgtcacccgcatatcgatctactg 18170148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 39856906 - 39856989
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  39856906 ctaatgacgatcttctggcagaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 39856989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 104 - 185
Target Start/End: Complemental strand, 35576545 - 35576464
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccac 185  Q
    |||||||||||||||| |  ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  35576545 ctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccac 35576464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 38 - 187
Target Start/End: Complemental strand, 17372996 - 17372850
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaagcttttg 137  Q
    ||||||||||||||| |||||||||||||| |||| |||||| |  |||||||||   |||| ||||||||||||||||||| |   ||| || |||| |    
T  17372996 caagtttgaattacctcattcaaaggaagacaattgttgtagttggaaggtgcat---ttccatacctaatgacgatcttctggcgaaattaaactttcg 17372900  T
Q  138 atgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||| ||||||||||| |||||| || |  ||||||||||||||    
T  17372899 atgatatcttcagttgatctcatcaacgttacacgtatatcgatccactg 17372850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 32 - 187
Target Start/End: Complemental strand, 17697321 - 17697169
Alignment:
Q  32 gtttggcaagtttgaattacccc-attcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaa 130  Q
    ||||| ||||||||||||||||| ||| ||||||||| || | |||||| |  ||||||||||| ||    ||||||| |||||||||| |  ||||||     
T  17697321 gtttgacaagtttgaattacccccatttaaaggaagacaactgttgtagttggaaggtgcattcctt----acctaatcacgatcttctggcggaatcag 17697226  T
Q  131 gcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
     || ||||| ||||||| ||||||||||||||||||||||| |||||||||||||||    
T  17697225 actcttgataatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 17697169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 27035318 - 27035401
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| || |||||||| | ||||||||||||| |||||||||||||||||| |||| |||||||||||||||    
T  27035318 ctaatgacgatcttctggtggaatcaagttgttgatgatatcttaagttgatctcagcaacgttacccgcatatcgatccactg 27035401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 39224197 - 39224280
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  |||||||| | |||||||||| |||||||||||||||||||||||||| |||||||||||||||    
T  39224197 ctaatgacgatcttctggcggaatcaagttgttgatgatatatttagttgatctcagcaacgtcacccgcatatcgatccactg 39224280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 38 - 186
Target Start/End: Complemental strand, 13283973 - 13283829
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaagcttttg 137  Q
    |||||||||||||||||||||||||||||| |||| |||||| |  |||||||||||  ||  |||||||| |||||||||| |  ||||||  || |||    
T  13283973 caagtttgaattaccccattcaaaggaagacaattgttgtagttggaaggtgcattc--tc--tacctaatcacgatcttctggcggaatcagactgttg 13283878  T
Q  138 atgatatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
    || |||| || |||||||||||||||||| |||  ||||||||||||||    
T  13283877 ataatatattcagttgatctcagcaacgttacctgcatatcgatccact 13283829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 31 - 187
Target Start/End: Complemental strand, 19160593 - 19160440
Alignment:
Q  31 tgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaa 130  Q
    |||||| |||||||||||||||||||||||||||||| |||| |||||| |  ||  ||||  | | || || |||||||| ||||||| |  |||||||    
T  19160593 tgtttgacaagtttgaattaccccattcaaaggaagacaattgttgtagttggaa--tgcac-cttaccctaactaatgacaatcttctggcggaatcaa 19160497  T
Q  131 gcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
     |||||||||||||||| | ||||||| |||||| |||||| |||||||||||||||    
T  19160496 acttttgatgatatcttcaattgatctaagcaacttcacccgcatatcgatccactg 19160440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 12791273 - 12791356
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  ||||||| |||||||||||||||| |||||||||||  |||||||||| |||||||||||||||    
T  12791273 ctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcaaaaacgtcacccgcatatcgatccactg 12791356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 38 - 186
Target Start/End: Original strand, 24363738 - 24363882
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaagcttttg 137  Q
    ||||||||||||||| |||||||||||||| |||| |||||| |  |||||||||||    | |||||||| |||||||||||   ||||||| || |||    
T  24363738 caagtttgaattacctcattcaaaggaagacaattgttgtagttggaaggtgcattc----cctacctaatcacgatcttctaacggaatcaaactcttg 24363833  T
Q  138 atgatatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
    || ||||||| ||||| ||||| |||||| | || ||||||||||||||    
T  24363834 ataatatcttcagttgctctcaacaacgttaaccgcatatcgatccact 24363882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 29436179 - 29436096
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| | | ||||||| | ||||||||||||| ||||||||||||||||||||||| | |||||||||||||    
T  29436179 ctaatgacgatcttctggcttaatcaagttgttgatgatatcttcagttgatctcagcaacgtcacccgcgtatcgatccactg 29436096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 124 - 187
Target Start/End: Original strand, 35526197 - 35526260
Alignment:
Q  124 gaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  35526197 gaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 35526260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 44597907 - 44597824
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||  |  |||||||| | ||||||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  44597907 ctaatgacgatcttccggcggaatcaagttgttgatgatatcttcagttgatctcatcaacgtcacccacatatcgatccactg 44597824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 45689325 - 45689242
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||| | |  |||||||||| ||||||||||||| ||||||||||||||||||||||| |||||| ||||||||    
T  45689325 ctaatgacgatcttatggcggaatcaagctgttgatgatatcttcagttgatctcagcaacgtcacccgcatatccatccactg 45689242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 46180280 - 46180363
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  |||||||||| ||||||||||||| | ||||||||| |||||| ||||||||||||||||||||    
T  46180280 ctaatgacgatcttctggcagaatcaagctgttgatgatatcttcaattgatctcaacaacgttacccacatatcgatccactg 46180363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 49427593 - 49427510
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  ||||||| |||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||    
T  49427593 ctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactg 49427510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 50068259 - 50068342
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  |||||||||| |||| |||||||| |||||||||||||||||| |||| |||||||||||||||    
T  50068259 ctaatgacgatcttctggcggaatcaagctgttgacgatatcttcagttgatctcagcaacgttacccgcatatcgatccactg 50068342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 51270008 - 51269925
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  |||||||| | ||||||||||||| |||||||| |||||||||||||| |||||||||||||||    
T  51270008 ctaatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatcccagcaacgtcacccgcatatcgatccactg 51269925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 105 - 187
Target Start/End: Original strand, 42571777 - 42571859
Alignment:
Q  105 taatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||||||||||||||| |  |||||||| | ||||||||||||| |||||||||||||||||| |||| |||||||||||||||    
T  42571777 taatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactg 42571859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 101 - 186
Target Start/End: Complemental strand, 3658682 - 3658597
Alignment:
Q  101 tacctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
    ||||||||||||||||||| |  ||||||| |||||||||||||||| |||||||||||||||||| ||   ||||||||||||||    
T  3658682 tacctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgttacttgcatatcgatccact 3658597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 104 - 184
Target Start/End: Original strand, 27486690 - 27486770
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatcca 184  Q
    |||||||||||||||  |  |||||||| | ||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  27486690 ctaatgacgatcttcaggcggaatcaagttgttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatcca 27486770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 13635297 - 13635380
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  ||||||| |||||||||||||||| ||||||||| | |||| |||||| |||||||||||||||    
T  13635297 ctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctaaccaacttcacccgcatatcgatccactg 13635380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 44337319 - 44337402
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  ||||||   | ||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  44337319 ctaatgacgatcttctggcggaatcatattgttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 44337402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 48215404 - 48215321
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||| ||||||| |  ||||||| |||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||    
T  48215404 ctaatgactatcttctggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactg 48215321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 98
Target Start/End: Original strand, 35526108 - 35526191
Alignment:
Q  15 aatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattc 98  Q
    |||||||||| ||| | |||||| ||||||||||||||||||||||| |||||   || ||||||||| |||||||||||||||    
T  35526108 aatattggagtcctgccgtttggaaagtttgaattaccccattcaaaagaagacctttgttgtagctataaggtgcattcattc 35526191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 48568404 - 48568487
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||| ||||||| |   ||||||| | ||||||||||||| |||||||||||||||||| |||| |||||||||||||||    
T  48568404 ctaatgacaatcttctggcgaaatcaagttgttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccactg 48568487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 104 - 182
Target Start/End: Original strand, 47488037 - 47488115
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatc 182  Q
    |||||||||||||||| |   ||||||||| ||||||| ||||| |||||||||||||||||| |||| ||||||||||    
T  47488037 ctaatgacgatcttctggcgaaatcaagctgttgatgacatcttcagttgatctcagcaacgttacccgcatatcgatc 47488115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 29762221 - 29762304
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||||||| |||||||| |  |||||||| | |||||||||| || ||||||||||| |||||||||||  ||||||||||||||    
T  29762221 ctaatgatgatcttctggcggaatcaagttgttgatgatattttcagttgatctcatcaacgtcacccgtatatcgatccactg 29762304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 104 - 186
Target Start/End: Original strand, 41874884 - 41874966
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
    ||||| |||||||||| |  |||||||| |  | ||||||||||||||||||||||||||| | |||| ||||||||||||||    
T  41874884 ctaataacgatcttctggcggaatcaagttgctaatgatatctttagttgatctcagcaacattacccgcatatcgatccact 41874966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 186
Target Start/End: Complemental strand, 5765422 - 5765330
Alignment:
Q  94 cattccgtacctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
    |||||| |||||||| |||||||||| |  ||||||  |  ||||| ||||||| | |||||||||||||||| |||| ||||||||||||||    
T  5765422 cattccctacctaatcacgatcttctggcggaatcagacggttgataatatcttcatttgatctcagcaacgttacccgcatatcgatccact 5765330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 22527783 - 22527735
Alignment:
Q  31 tgtttggcaagtttgaattaccccattcaaaggaagataattattgtag 79  Q
    |||||| |||||||||||||||||||||||||||||| |||| ||||||    
T  22527783 tgtttgacaagtttgaattaccccattcaaaggaagacaattgttgtag 22527735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 49262988 - 49263071
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||||||| ||| ||||||  |||||||| | ||||||||||||| ||||||||||| |||||| |||  ||||| |||||||||    
T  49262988 ctaatgaagatattctagaggaatcaagatgttgatgatatcttcagttgatctcaacaacgttaccagcatatagatccactg 49263071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 94 - 184
Target Start/End: Original strand, 16532080 - 16532170
Alignment:
Q  94 cattccgtacctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatcca 184  Q
    |||||| |||||||| ||||||||||||   |||||  || ||||| ||||||| |||||||||||||||||| || | |||||| |||||    
T  16532080 cattccatacctaatcacgatcttctagcgaaatcagactattgataatatcttcagttgatctcagcaacgttacacgcatatcaatcca 16532170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 141 - 187
Target Start/End: Complemental strand, 18842608 - 18842562
Alignment:
Q  141 atatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||||||| |||||||||||||||||| |||| |||||||||||||||    
T  18842608 atatcttcagttgatctcagcaacgttacccgcatatcgatccactg 18842562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 30309832 - 30309909
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  |||||||||| |||||||||| || |||||||||      |||||||| |||||||||||||||    
T  30309832 ctaatgacgatcttctggcggaatcaagctgttgatgatatattcagttgatct------cgtcacccgcatatcgatccactg 30309909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 41781165 - 41781215
Alignment:
Q  16 atattggagaccttctgtttggcaagtttgaa-ttaccccattcaaaggaa 65  Q
    ||||||||| ||| ||| |||||||||||||| ||||||||||||||||||    
T  41781165 atattggagtcctgctgcttggcaagtttgaatttaccccattcaaaggaa 41781215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 49397244 - 49397210
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagataatt 72  Q
    |||||||||||||||||||||||||||||| ||||    
T  49397244 caagtttgaattaccccattcaaaggaagacaatt 49397210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 13973524 - 13973483
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagataattattgtag 79  Q
    |||||||||||||||||||||| ||||||| |||| ||||||    
T  13973524 caagtttgaattaccccattcagaggaagacaattgttgtag 13973483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 18170667 - 18170606
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattcc 99  Q
    ||||||||||||||| ||||||||| |||| |||| |||| | |  ||||||||||||||||    
T  18170667 caagtttgaattacctcattcaaagaaagacaattgttgttgttggaaggtgcattcattcc 18170606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 150 - 187
Target Start/End: Original strand, 49598921 - 49598958
Alignment:
Q  150 gttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||||||||||||||||| |||| |||||||||||||||    
T  49598921 gttgatctcagcaacgttacccgcatatcgatccactg 49598958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 24270099 - 24270051
Alignment:
Q  16 atattggagaccttctgtttggcaagtttgaa-ttaccccattcaaagg 63  Q
    ||||||||| ||| ||| |||||||||||||| ||||||||||||||||    
T  24270099 atattggagtcctgctgcttggcaagtttgaatttaccccattcaaagg 24270051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 119; Significance: 5e-61; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 119; E-Value: 5e-61
Query Start/End: Original strand, 32 - 186
Target Start/End: Complemental strand, 35565548 - 35565394
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||||| |  |||||||     
T  35565548 gtttggcaagtttgaattaccccattcaaaggaagataattgttgtagctgaaaggtgcattcattccgcacctaatgacgatcttctggcggaatcaaa 35565449  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
    ||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  35565448 cttctgatgatatctttagttgatctcagcaacgtcacccgcatatcgatccact 35565394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 4723986 - 4724159
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||| ||| | |||||||||||||||||||||||||||| ||||||| |||| ||||||||  ||||||||||||||  ||||||||||||||    
T  4723986 gaatattggagtcctgccgtttggcaagtttgaattaccccattcagaggaagacaattgttgtagctgcaaggtgcattcatttggtacctaatgacga 4724085  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| |  ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  4724086 tcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 4724159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 14 - 187
Target Start/End: Original strand, 1400214 - 1400387
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||| |||||||   |||||||||||||||||||||||||| ||||||||| |||| ||||||||  |||||||||||| |||||||||||||||||    
T  1400214 gaatattagagacctatcgtttggcaagtttgaattaccccattaaaaggaagacaattgttgtagctggaaggtgcattcactccgtacctaatgacga 1400313  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||| |  ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||    
T  1400314 tcttctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatggatccactg 1400387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 18308555 - 18308382
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||||||| | |||||||||||||||||||||||||||||||||||| |||| |||||| |  |||||||||||||||| ||||||||| | |    
T  18308555 gaatattggagacctcccgtttggcaagtttgaattaccccattcaaaggaagacaattgttgtaggtggaaggtgcattcattccatacctaatgtcaa 18308456  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||| || |  |||||||  ||||||||||||||| |||||||||||||||| |||||| |||||||||||||||    
T  18308455 tctactggcggaatcaaatttttgatgatatcttcagttgatctcagcaacatcacccgcatatcgatccactg 18308382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 32 - 184
Target Start/End: Complemental strand, 1695066 - 1694914
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    |||||| ||||||||||||||| ||||| ||||||| |||| ||||||||  ||||||||||||||| |||||||||||||||||||| |  |||||||     
T  1695066 gtttggaaagtttgaattacccaattcagaggaagacaattgttgtagctggaaggtgcattcattcggtacctaatgacgatcttctggcggaatcaaa 1694967  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatcca 184  Q
    |||||||||||||||| ||||||||||| ||||||||||| ||||||| ||||    
T  1694966 cttttgatgatatcttcagttgatctcaacaacgtcacccgcatatcgttcca 1694914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 69 - 187
Target Start/End: Original strand, 36350281 - 36350399
Alignment:
Q  69 aattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtca 168  Q
    |||| ||||||||  ||||||||||||||| |||||||||||||||||||| || ||||||| |||||||||||||||| ||||||||||||||||||||    
T  36350281 aattgttgtagctggaaggtgcattcattcggtacctaatgacgatcttctggtggaatcaaacttttgatgatatcttcagttgatctcagcaacgtca 36350380  T
Q  169 cccacatatcgatccactg 187  Q
    || ||||||||||||||||    
T  36350381 cctacatatcgatccactg 36350399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 69 - 186
Target Start/End: Original strand, 6793353 - 6793470
Alignment:
Q  69 aattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtca 168  Q
    |||| ||||||||  ||||||||||||||| |||||||||||||||||||| | |||||||| |||||||||||||||| | |||||||||||||| |||    
T  6793353 aattgttgtagctggaaggtgcattcattcagtacctaatgacgatcttctggctgaatcaaacttttgatgatatcttcaattgatctcagcaacctca 6793452  T
Q  169 cccacatatcgatccact 186  Q
     || ||||||||| ||||    
T  6793453 tccgcatatcgattcact 6793470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 5e-27
Query Start/End: Original strand, 31 - 187
Target Start/End: Original strand, 27661309 - 27661462
Alignment:
Q  31 tgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaa 130  Q
    |||||| |||||||||||||||||||||||||||||| |||| |||||| |  ||  ||||  | | || || |||||||| ||||||| |  |||||||    
T  27661309 tgtttgacaagtttgaattaccccattcaaaggaagacaattgttgtagttggaa--tgcac-cttaccctaactaatgacaatcttctggcggaatcaa 27661405  T
Q  131 gcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
     |||||||||||||||||||||||||| |||||| |||||| |||||||||||||||    
T  27661406 acttttgatgatatctttagttgatctaagcaacttcacccgcatatcgatccactg 27661462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 31 - 187
Target Start/End: Original strand, 7161 - 7314
Alignment:
Q  31 tgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaa 130  Q
    |||||| ||| |||||||||||||||||||||||||| |||| |||||| |  ||  ||||  | | || || |||||||||||||||| |  |||||||    
T  7161 tgtttgacaaatttgaattaccccattcaaaggaagacaattgttgtagttggaa--tgcac-cttaccctaactaatgacgatcttctggcggaatcaa 7257  T
Q  131 gcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
     |||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||    
T  7258 acttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactg 7314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 104 - 188
Target Start/End: Complemental strand, 40009733 - 40009649
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactgt 188  Q
    |||||||||||||||| || |||||||||| |||||||| |||| ||||||||||| |||||| |||||||||||||||||||||    
T  40009733 ctaatgacgatcttcttgtggaatcaagctgttgatgatgtcttcagttgatctcaacaacgttacccacatatcgatccactgt 40009649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 7082426 - 7082343
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  |||||||| | ||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  7082426 ctaatgacgatcttctggcggaatcaagttgttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 7082343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 31 - 185
Target Start/End: Original strand, 8576073 - 8576224
Alignment:
Q  31 tgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaa 130  Q
    |||||| |||||||||||||||||||||||||||||| |||| |||||| |  ||  ||||  | | || || |||||||| ||||||| |  |||||||    
T  8576073 tgtttgacaagtttgaattaccccattcaaaggaagacaattgttgtagttggaa--tgcac-cttaccctaactaatgacaatcttctggcggaatcaa 8576169  T
Q  131 gcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccac 185  Q
     |||||||||||||||| ||||||||| |||||| |||||| |||||||||||||    
T  8576170 acttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccac 8576224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 31 - 187
Target Start/End: Complemental strand, 28881266 - 28881113
Alignment:
Q  31 tgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaa 130  Q
    |||||| ||||||||||||||||||||||||| |||| |||| |||||| |  ||  ||||  | | || || |||||||||||||| | |  |||||||    
T  28881266 tgtttgacaagtttgaattaccccattcaaagaaagacaattgttgtagttggaa--tgcac-cttaccctaactaatgacgatcttgtggcggaatcaa 28881170  T
Q  131 gcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
     |||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||    
T  28881169 acttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactg 28881113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 8538159 - 8538076
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  ||||||| |||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||    
T  8538159 ctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactg 8538076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 104 - 180
Target Start/End: Complemental strand, 3601546 - 3601470
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcga 180  Q
    ||||||||||||||||    ||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  3601546 ctaatgacgatcttctgacggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcga 3601470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 135 - 187
Target Start/End: Original strand, 35927470 - 35927522
Alignment:
Q  135 ttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  35927470 ttgatgatatctttagttgatctcagcaacgtcacccgcatatcgatccactg 35927522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 541637 - 541720
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |   ||||||| | ||||||||||||  ||||||||||||||||||||||| |||||||||||||||    
T  541637 ctaatgacgatcttctggcgaaatcaagttgttgatgatatctccagttgatctcagcaacgtcacccgcatatcgatccactg 541720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 11346914 - 11346831
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  ||||||| |||||||||||||||| ||||||||| |||||| |||| | |||||||||||||||    
T  11346914 ctaatgacgatcttctggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcactcgcatatcgatccactg 11346831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 19036676 - 19036759
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||| | |  ||||||| |||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||    
T  19036676 ctaatgacgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactg 19036759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 19400568 - 19400485
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||||||||||| |||| |  |||||||| | ||||||||||||| ||||||||||| ||||||||||| |||||||||||||||    
T  19400568 ctaatgacgatattctggcggaatcaagttgttgatgatatcttcagttgatctcaccaacgtcacccgcatatcgatccactg 19400485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 124 - 187
Target Start/End: Complemental strand, 1971550 - 1971487
Alignment:
Q  124 gaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||| ||||||||||||| |||||||||||||||||| |||| ||||| |||||||||    
T  1971550 gaatcaagctgttgatgatatcttcagttgatctcagcaacgttacccgcatattgatccactg 1971487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 11027982 - 11027899
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  ||||||| |||| ||||||||||| ||||||||| | |||| |||||| |||||||||||||||    
T  11027982 ctaatgacgatcttctggcggaatcaaactttcgatgatatcttcagttgatctaaccaacttcacccgcatatcgatccactg 11027899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 30709803 - 30709720
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||  |  ||||||| |||||||||||||||| ||||||||| | |||| |||||| |||||||||||||||    
T  30709803 ctaatgacgatcttccggcggaatcaaacttttgatgatatcttcagttgatctaaccaacttcacccgcatatcgatccactg 30709720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 38854363 - 38854280
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||||||||| |||||| |  ||||||| |||||||||||||||| ||||||||| | |||| |||||| |||||||||||||||    
T  38854363 ctaatgacggtcttctggcggaatcaaacttttgatgatatcttcagttgatctaaccaacttcacccgcatatcgatccactg 38854280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 38 - 117
Target Start/End: Complemental strand, 7082871 - 7082792
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatctt 117  Q
    ||||||||||||||| | |||||||||||| |||| ||| || |  ||||||||||||||| ||||||| ||||||||||    
T  7082871 caagtttgaattaccacgttcaaaggaagacaattgttgcagttggaaggtgcattcattctgtacctactgacgatctt 7082792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 31 - 176
Target Start/End: Complemental strand, 22283846 - 22283704
Alignment:
Q  31 tgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaa 130  Q
    |||||| |||||||||||||||||||||||||||||| |||| |||||| |  ||  ||||  | |  | || |||| |||||| || | || |||||||    
T  22283846 tgtttgacaagtttgaattaccccattcaaaggaagacaattgttgtagttggaa--tgca-ccttatcctaactaaggacgattttatggtggaatcaa 22283750  T
Q  131 gcttttgatgatatctttagttgatctcagcaacgtcacccacata 176  Q
     |||||||||||||||| ||||||||| |||||| |||||| ||||    
T  22283749 acttttgatgatatcttaagttgatctaagcaacttcacccgcata 22283704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 101 - 187
Target Start/End: Complemental strand, 33370862 - 33370776
Alignment:
Q  101 tacctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||| | |||||||| |  ||||||  || ||||| ||||||| |||||||||||||||||| |||| |||||||||||||||    
T  33370862 tacctaatcatgatcttctggcggaatcagactgttgataatatcttcagttgatctcagcaacgttacccgcatatcgatccactg 33370776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 99
Target Start/End: Complemental strand, 1171786 - 1171725
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattcc 99  Q
    |||||||||||||||||||||||||||||| |||| ||| || |  ||||||||||||||||    
T  1171786 caagtttgaattaccccattcaaaggaagacaattgttgcagttggaaggtgcattcattcc 1171725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 166
Target Start/End: Original strand, 17195351 - 17195423
Alignment:
Q  94 cattccgtacctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgt 166  Q
    |||||| |||||||| |||||||||| |  |||||||  | ||||| ||||||||||||||||||||||||||    
T  17195351 cattccctacctaatcacgatcttctggcggaatcaaattgttgataatatctttagttgatctcagcaacgt 17195423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 104 - 159
Target Start/End: Complemental strand, 3458995 - 3458940
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctca 159  Q
    ||||||||||||||||||  |||||||||| ||||||||||||| | |||||||||    
T  3458995 ctaatgacgatcttctagcggaatcaagctgttgatgatatcttcaattgatctca 3458940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 4723682 - 4723723
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagataattattgtag 79  Q
    |||||||||||||||||||||||||||||| |||| ||||||    
T  4723682 caagtttgaattaccccattcaaaggaagacaattgttgtag 4723723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 182
Target Start/End: Complemental strand, 18920949 - 18920861
Alignment:
Q  94 cattccgtacctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatc 182  Q
    |||||| |||||||| |||||||||| |  ||||||| || ||||  ||||||| |||||||||| ||||||| ||  |||||||||||    
T  18920949 cattccctacctaatcacgatcttctggcggaatcaaactgttgagaatatcttcagttgatctctgcaacgtgacaaacatatcgatc 18920861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 163
Target Start/End: Complemental strand, 12742880 - 12742818
Alignment:
Q  101 tacctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaa 163  Q
    |||||||| |||||||||| |  ||||||  || ||||||||||||| |||||||||||||||    
T  12742880 tacctaatcacgatcttctggcggaatcagactgttgatgatatcttcagttgatctcagcaa 12742818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Complemental strand, 25498681 - 25498647
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagataatt 72  Q
    |||||||||||||||||||||||||||||| ||||    
T  25498681 caagtttgaattaccccattcaaaggaagacaatt 25498647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 72
Target Start/End: Original strand, 34683533 - 34683567
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagataatt 72  Q
    |||||||||||||||||||||||||||||| ||||    
T  34683533 caagtttgaattaccccattcaaaggaagacaatt 34683567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 63
Target Start/End: Original strand, 20196549 - 20196597
Alignment:
Q  16 atattggagaccttctgtttggcaagtttgaa-ttaccccattcaaagg 63  Q
    ||||||||| ||| ||| |||||||||||||| ||||||||||||||||    
T  20196549 atattggagtcctgctgcttggcaagtttgaatttaccccattcaaagg 20196597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 33371225 - 33371169
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattc 94  Q
    |||||||||||||||  ||| ||||||||| |||| |||||| | ||||||||||||    
T  33371225 caagtttgaattacctaatttaaaggaagacaattgttgtagttgaaaggtgcattc 33371169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 114; Significance: 5e-58; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 18 - 187
Target Start/End: Complemental strand, 13402829 - 13402660
Alignment:
Q  18 attggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatctt 117  Q
    |||||||||||   |||||||||||||||||||||||||||||||||||| |||| ||||||||  ||||||||||||||||||||||||||||||||||    
T  13402829 attggagacctgtcgtttggcaagtttgaattaccccattcaaaggaagacaattgttgtagctggaaggtgcattcattccgtacctaatgacgatctt 13402730  T
Q  118 ctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    || |  |||||||  ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  13402729 ctggcggaatcaaatttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 13402660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 18 - 186
Target Start/End: Original strand, 32027541 - 32027709
Alignment:
Q  18 attggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatctt 117  Q
    ||||||| ||| | |||||||| ||||||||||||||||||||||||||| |||| ||||||||  ||||||||||||||||||||||||||||||||||    
T  32027541 attggagtcctgccgtttggcatgtttgaattaccccattcaaaggaagacaattgttgtagctggaaggtgcattcattccgtacctaatgacgatctt 32027640  T
Q  118 ctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
    || |  ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||| |||||||    
T  32027641 ctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcaatccact 32027709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 107; E-Value: 8e-54
Query Start/End: Original strand, 32 - 186
Target Start/End: Original strand, 30257506 - 30257660
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    |||||||||||||||||||||||||| | ||||||| |||| ||||||||  ||||||||||||||| ||||||||||||||||||||||  |||||||     
T  30257506 gtttggcaagtttgaattaccccatttagaggaagacaattgttgtagctggaaggtgcattcattcggtacctaatgacgatcttctagcggaatcaaa 30257605  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  30257606 cttttgatgatatcttcaattgatctcagcaacgtcacccacatatcgatccact 30257660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 14 - 187
Target Start/End: Complemental strand, 12397076 - 12396903
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||||||| | ||||| ||||||||||||||| |||||||||||||| |||| ||||||||||||||||||||||||| ||||||||||||||    
T  12397076 gaatattggagacctgccgtttgacaagtttgaattacctcattcaaaggaagacaattgttgtagctaaaaggtgcattcattctgtacctaatgacga 12396977  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||| | |  |||||||| | ||||||||||||| ||| |||||||||||||| |||| |||||||||||||||    
T  12396976 tcttttggcggaatcaagttgttgatgatatcttcagtagatctcagcaacgttacccgcatatcgatccactg 12396903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 97; E-Value: 7e-48
Query Start/End: Original strand, 18 - 186
Target Start/End: Original strand, 32037600 - 32037768
Alignment:
Q  18 attggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatctt 117  Q
    ||||||| ||| | |||||||| ||||||||||||||||||||||||||| |||| ||||||||  || ||||||| ||||| |||||||||||||||||    
T  32037600 attggagtcctgccgtttggcatgtttgaattaccccattcaaaggaagacaattgttgtagctttaatgtgcatttattccttacctaatgacgatctt 32037699  T
Q  118 ctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
    || |  ||||||| |||||||||||||||| ||||||||||||||||||||||| |||||| |||||||    
T  32037700 ctggcggaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcaatccact 32037768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 14 - 152
Target Start/End: Original strand, 35021146 - 35021284
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacga 113  Q
    ||||||||||||||| | ||||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||    
T  35021146 gaatattggagacctgccgtttgacaagtttgaattaccccattcaaaggaagacaattgttgtagctaaaaggtgcattcattccgtacttaatgacga 35021245  T
Q  114 tcttctagttgaatcaagcttttgatgatatctttagtt 152  Q
    |||||| |  ||||||| |||||||||||||||| ||||    
T  35021246 tcttctggcggaatcaaacttttgatgatatcttcagtt 35021284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 32 - 181
Target Start/End: Original strand, 34802823 - 34802972
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    ||||||||||||||||||||| |||||||||||||| |||| ||||||||  || | ||||||||||| ||||||||||||||||| | |   ||||||     
T  34802823 gtttggcaagtttgaattaccacattcaaaggaagacaatttttgtagctcgaaagcgcattcattccttacctaatgacgatcttttggcgaaatcaaa 34802922  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgat 181  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||    
T  34802923 cttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgat 34802972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 32 - 187
Target Start/End: Complemental strand, 801444 - 801292
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    |||| |||||||||||||||| |||||||||||||| |||| |||||| |  ||  ||||  | | || || |||||||||||||||| |  |||||||     
T  801444 gtttcgcaagtttgaattacctcattcaaaggaagacaattgttgtagttggaa--tgcac-cttaccctaactaatgacgatcttctggcggaatcaaa 801348  T
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  801347 cttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 801292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 104 - 187
Target Start/End: Original strand, 35058734 - 35058817
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| || |||| ||| | |||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  35058734 ctaatgacgatcttcttgtggaattaagatgttgatgatatctttagttgatctcagcaacgttacccgcatatcgatccactg 35058817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 34 - 187
Target Start/End: Complemental strand, 14115313 - 14115164
Alignment:
Q  34 ttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaagct 133  Q
    |||||||||||||||||||| ||| ||||||||| |||| |||||| |  |||||||||||    | |||||||| || ||||||| |  ||||||  ||    
T  14115313 ttggcaagtttgaattaccctatttaaaggaagacaattgttgtagttggaaggtgcattc----cctacctaatcactatcttctggcagaatcagact 14115218  T
Q  134 tttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
     ||||||||||||| ||||||||||| |||||| |||| ||||| |||||||||    
T  14115217 cttgatgatatcttcagttgatctcaacaacgttacccgcatattgatccactg 14115164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 29108350 - 29108267
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| |  |||||||| | ||||| ||||||| ||||||||||||||||||||||| |||||||||||||||    
T  29108350 ctaatgacgatcttctggcggaatcaagttgttgatcatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 29108267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 31 - 187
Target Start/End: Complemental strand, 27640460 - 27640307
Alignment:
Q  31 tgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaa 130  Q
    |||||| ||||||||||||||| |||||||||||||| || | |||||| |  ||  ||||  | | || || |||||||||||||| | |  |||||||    
T  27640460 tgtttgacaagtttgaattacctcattcaaaggaagacaaatgttgtagttggaa--tgcac-cttaccctaactaatgacgatcttgtggcggaatcaa 27640364  T
Q  131 gcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
     |||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||    
T  27640363 acttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactg 27640307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 6205694 - 6205611
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||| | |  ||||||| |||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||    
T  6205694 ctaatgacgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactg 6205611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 11692661 - 11692578
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||| | |  ||||||| |||||||||||||||| ||||||||| |||||| |||||| |||||||||||||||    
T  11692661 ctaatgacgatcttgtggcggaatcaaacttttgatgatatcttcagttgatctaagcaacttcacccgcatatcgatccactg 11692578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 104 - 184
Target Start/End: Original strand, 3765786 - 3765867
Alignment:
Q  104 ctaatgacgatcttctagttgaatc-aagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatcca 184  Q
    ||||||| |||||||| || ||||  || |||||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  3765786 ctaatgatgatcttctggtggaatttaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatcca 3765867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 29066763 - 29066680
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||||||||||||| || |  |||||||| | ||||| ||||||| |||||||||||||||| |||||| |||||||||||||||    
T  29066763 ctaatgacgatctactggcggaatcaagttgttgatcatatcttcagttgatctcagcaacatcacccgcatatcgatccactg 29066680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 29075776 - 29075693
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||||||||||||| || |  |||||||| | ||||| ||||||| |||||||||||||||| |||||| |||||||||||||||    
T  29075776 ctaatgacgatctgctggcggaatcaagttgttgatcatatcttcagttgatctcagcaacatcacccgcatatcgatccactg 29075693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 29110748 - 29110665
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    ||||||||||||| || |  |||||||| | ||||| ||||||| |||||||||||||||| |||||| |||||||||||||||    
T  29110748 ctaatgacgatctgctggcggaatcaagttgttgatcatatcttcagttgatctcagcaacatcacccgcatatcgatccactg 29110665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 98
Target Start/End: Complemental strand, 4495185 - 4495119
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattc 98  Q
    ||||||| || ||||||||||||||||||||||||| |||| ||||||||  |||||||||||||||    
T  4495185 gtttggccagattgaattaccccattcaaaggaagacaattgttgtagctggaaggtgcattcattc 4495119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 176
Target Start/End: Original strand, 24021026 - 24021168
Alignment:
Q  31 tgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaa 130  Q
    |||||| |||||||||||||||||||||||||||||| |||| |||||| |  ||  ||||  | | || || ||||||||||| || | |  |||||||    
T  24021026 tgtttgacaagtttgaattaccccattcaaaggaagacaattgttgtagttggaa--tgca-ccttaccctaactaatgacgattttatggcggaatcaa 24021122  T
Q  131 gcttttgatgatatctttagttgatctcagcaacgtcacccacata 176  Q
     |||||||||||||||| ||||||||| |||||| |||||| ||||    
T  24021123 acttttgatgatatcttaagttgatctaagcaacttcacccgcata 24021168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 38 - 117
Target Start/End: Original strand, 30257133 - 30257212
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatctt 117  Q
    ||||||||||||||| |||| |||| |||| |||| |||||| |  |||||||||||||||||||||||  |||||||||    
T  30257133 caagtttgaattacctcatttaaagaaagacaattgttgtagtttgaaggtgcattcattccgtacctaccgacgatctt 30257212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 176
Target Start/End: Complemental strand, 2192670 - 2192535
Alignment:
Q  38 caagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaagcttttg 137  Q
    |||||||||||||||||||||||||||||| |||| |||||| |  ||  ||||  | | || || ||||||||||| || | |  |||||||  |||||    
T  2192670 caagtttgaattaccccattcaaaggaagacaattgttgtagttggaa--tgca-ccttaccctaactaatgacgattttatggcggaatcaaaattttg 2192574  T
Q  138 atgatatctttagttgatctcagcaacgtcacccacata 176  Q
    |||||||||| ||||||||| |||||| |||||| ||||    
T  2192573 atgatatcttaagttgatctaagcaacttcacccgcata 2192535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 187
Target Start/End: Complemental strand, 22305978 - 22305923
Alignment:
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||||| ||||||||| | |||| |||||| |||||||||||||||    
T  22305978 cttttgatgatatcttcagttgatctaaccaacttcacccgcatatcgatccactg 22305923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 14 - 79
Target Start/End: Original strand, 12397250 - 12397317
Alignment:
Q  14 gaatattggagaccttctgtttggcaagtttgaa-ttaccccattcaaagg-aagataattattgtag 79  Q
    ||||||||||| ||| ||| |||||||||||||| |||||||||||||||| |||| |||| ||||||    
T  12397250 gaatattggagtcctgctgcttggcaagtttgaatttaccccattcaaaggtaagacaattgttgtag 12397317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 38 - 67
Target Start/End: Original strand, 32027233 - 32027262
Alignment:
Q  38 caagtttgaattaccccattcaaaggaaga 67  Q
    ||||||||||||||||||||||||||||||    
T  32027233 caagtttgaattaccccattcaaaggaaga 32027262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 38 - 67
Target Start/End: Original strand, 32037292 - 32037321
Alignment:
Q  38 caagtttgaattaccccattcaaaggaaga 67  Q
    ||||||||||||||||||||||||||||||    
T  32037292 caagtttgaattaccccattcaaaggaaga 32037321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 101 - 185
Target Start/End: Original strand, 17465331 - 17465415
Alignment:
Q  101 tacctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccac 185  Q
    |||||||| |||||||| | |  ||||||| || ||||  ||||||| |||||||||| ||||||| ||  ||||||||||||||    
T  17465331 tacctaatcacgatcttttggcggaatcaaactgttgagaatatcttcagttgatctctgcaacgtgacaaacatatcgatccac 17465415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 55; Significance: 8e-23; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 104 - 186
Target Start/End: Original strand, 17916 - 17998
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccact 186  Q
    |||||||||||||||| |  |||||||||| ||||||||||||| |||||||||||||||||| |||| ||||||||||||||    
T  17916 ctaatgacgatcttctggcggaatcaagctgttgatgatatcttcagttgatctcagcaacgttacccgcatatcgatccact 17998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 32 - 163
Target Start/End: Complemental strand, 64226 - 64098
Alignment:
Q  32 gtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaag 131  Q
    ||||||||||||||||||||  |||||||||||||| |||| |||||| |  || || | ||    || ||||||||||||||||||| || |||||||     
T  64226 gtttggcaagtttgaattacttcattcaaaggaagacaattgttgtagttggaatgtacctta---ccctacctaatgacgatcttctggtggaatcaaa 64130  T
Q  132 cttttgatgatatctttagttgatctcagcaa 163  Q
    |||||||||||||||| |||||||||||||||    
T  64129 cttttgatgatatcttcagttgatctcagcaa 64098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 52; Significance: 5e-21; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 1998 - 1915
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||| | |   |||||| |||||||||||||||| ||||||||||||||||||||||| |||||||||||||||    
T  1998 ctaatgacgatcttatggcgaaatcaaacttttgatgatatcttcagttgatctcagcaacgtcacccgcatatcgatccactg 1915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 176
Target Start/End: Complemental strand, 85604 - 85462
Alignment:
Q  31 tgtttggcaagtttgaattaccccattcaaaggaagataattattgtagctaaaaggtgcattcattccgtacctaatgacgatcttctagttgaatcaa 130  Q
    |||||| |||||||||||||||||||||||||||||| |||| |||||| |  ||  ||||  | | || || ||||||||||| || | | ||||||||    
T  85604 tgtttgacaagtttgaattaccccattcaaaggaagacaattgttgtagttggaa--tgcac-cttaccctaactaatgacgattttatggctgaatcaa 85508  T
Q  131 gcttttgatgatatctttagttgatctcagcaacgtcacccacata 176  Q
     |||||||||||||||| ||||||||| |||||| |||||| ||||    
T  85507 acttttgatgatatcttaagttgatctaagcaacttcacccgcata 85462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0589 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0589
Description:

Target: scaffold0589; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 104 - 187
Target Start/End: Complemental strand, 2475 - 2392
Alignment:
Q  104 ctaatgacgatcttctagttgaatcaagcttttgatgatatctttagttgatctcagcaacgtcacccacatatcgatccactg 187  Q
    |||||||||||||| | |  |||||||||| ||||||||||||| | ||||||||| |||||| |||| |||||||||||||||    
T  2475 ctaatgacgatcttttggcggaatcaagctgttgatgatatcttcaattgatctcatcaacgttacccgcatatcgatccactg 2392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 14746 - 14698
Alignment:
Q  31 tgtttggcaagtttgaattaccccattcaaaggaagataattattgtag 79  Q
    |||||| |||||||||||||||||||||||||||||| |||| ||||||    
T  14746 tgtttgacaagtttgaattaccccattcaaaggaagacaattgttgtag 14698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 176
Target Start/End: Complemental strand, 14648 - 14604
Alignment:
Q  132 cttttgatgatatctttagttgatctcagcaacgtcacccacata 176  Q
    |||||||||| ||||| ||||||||| |||||| |||||||||||    
T  14648 cttttgatgaaatcttaagttgatctaagcaacttcacccacata 14604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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