View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5177-Insertion-1 (Length: 273)
Name: NF5177-Insertion-1
Description: NF5177
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5177-Insertion-1 |
 | |
|
| [»] chr7 (19 HSPs) |
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|
| [»] scaffold0182 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 240; Significance: 1e-133; HSPs: 19)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 240; E-Value: 1e-133
Query Start/End: Original strand, 6 - 273
Target Start/End: Complemental strand, 21689642 - 21689375
Alignment:
| Q |
6 |
caaaatgacccttcagtttatcaatgttatcaacaatgtttttgtgtagatccctctgaatgcttccagtgtttttgatgtattttgctgcccacataag |
105 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
21689642 |
caaaatgacccttcagtttatcaatgttatcaacaatgtttttgtgtagatccctctgaatgcttccagtgtttttgatgtattttgctgcccacataag |
21689543 |
T |
|
| Q |
106 |
cttgtacttctctcctaactttagatgtttattgccatgatggataggacctattgacatcaacctcggggtgtaatacttctcaaatttttctctattt |
205 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||||||||||| |
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|
| T |
21689542 |
cttgtacttctctcctaactttagagatttattgccatgatggataggaccttttgacatcaacctcggggtctaatgcttctcaaatttttctctattt |
21689443 |
T |
|
| Q |
206 |
ctgagatactcttgcacccttcgtatctttggccgtgaactttcgggtgttggatttgtatctatgta |
273 |
Q |
| |
|
||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |
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|
| T |
21689442 |
ctgagatactcttgcaccctttgtatctttggtcgtgaactttcgggtgttggatttgtatctatgta |
21689375 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 7 - 273
Target Start/End: Complemental strand, 21681878 - 21681612
Alignment:
| Q |
7 |
aaaatgacccttcagtttatcaatgttatcaacaatgtttttgtgtagatccctctgaatgcttccagtgtttttgatgtattttgctgcccacataagc |
106 |
Q |
| |
|
|||||| ||||||| || ||||||||||||| |||| ||||||| ||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
21681878 |
aaaatggcccttcaattcatcaatgttatcagcaatttttttgtatagatccttttgaatgcttccagtgtttttgatgtattttgctgcccacataagc |
21681779 |
T |
|
| Q |
107 |
ttgtacttctctcctaactttagatgtttattgccatgatggataggacctattgacatcaacctcggggtgtaatacttctcaaatttttctctatttc |
206 |
Q |
| |
|
||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||| | ||| |||||| || || ||||||| ||||||| |
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|
| T |
21681778 |
ttgtacttctctcctaactttagatctgtattgccatgatggataggacctattgacacaaacttggggctgtaatgctccttaaattttgttctatttt |
21681679 |
T |
|
| Q |
207 |
tgagatactcttgcacccttcgtatctttggccgtgaactttcgggtgttggatttgtatctatgta |
273 |
Q |
| |
|
||| |||| | |||||||| |||||||||| |||||| ||| ||||||| |||||||||||||||| |
|
|
| T |
21681678 |
tgacataccgtggcaccctttgtatctttggtcgtgaattttggggtgtttgatttgtatctatgta |
21681612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 7 - 273
Target Start/End: Complemental strand, 21646971 - 21646705
Alignment:
| Q |
7 |
aaaatgacccttcagtttatcaatgttatcaacaatgtttttgtgtagatccctctgaatgcttccagtgtttttgatgtattttgctgcccacataagc |
106 |
Q |
| |
|
||||||||||||||||| |||||||||||| ||||| ||||||||||||||| ||| ||| ||||| ||||||||||||||||||||||||||||||||| |
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|
| T |
21646971 |
aaaatgacccttcagttcatcaatgttatctacaatctttttgtgtagatccttcttaattcttcccgtgtttttgatgtattttgctgcccacataagc |
21646872 |
T |
|
| Q |
107 |
ttgtacttctctcctaactttagatgtttattgccatgatggataggacctattgacatcaacctcggggtgtaatacttctcaaatttttctctatttc |
206 |
Q |
| |
|
||||| |||||||||| ||| || | | |||| |||||||||||||||||||||||| |||| | |||||||||| || |||||||||| |||||||| |
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|
| T |
21646871 |
ttgtatttctctcctatcttcagctttggattgtcatgatggataggacctattgacaccaacttgggggtgtaatgctcctcaaattttgttctatttc |
21646772 |
T |
|
| Q |
207 |
tgagatactcttgcacccttcgtatctttggccgtgaactttcgggtgttggatttgtatctatgta |
273 |
Q |
| |
|
||||||||| | |||||||| |||||||||| |||||| ||| ||||||| ||| | |||||||||| |
|
|
| T |
21646771 |
tgagatactgtggcaccctttgtatctttggtcgtgaattttggggtgtttgatctatatctatgta |
21646705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 15 - 273
Target Start/End: Complemental strand, 21792231 - 21791973
Alignment:
| Q |
15 |
ccttcagtttatcaatgttatcaacaatgtttttgtgtagatccctctgaatgcttccagtgtttttgatgtattttgctgcccacataagcttgtactt |
114 |
Q |
| |
|
||||||| ||||||||||||| |||| |||||||| ||||| || |||||||| |||| ||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
21792231 |
ccttcagcgtatcaatgttatcggcaatctttttgtgcagatctttcagaatgctttcagtttttttgatgtattctgctgcccacataagcttgtactt |
21792132 |
T |
|
| Q |
115 |
ctctcctaactttagatgtttattgccatgatggataggacctattgacatcaacctcggggtgtaatacttctcaaatttttctctatttctgagatac |
214 |
Q |
| |
|
||||||||||| |||| | || ||||||||||||| ||||||||||| | ||||| ||| |||||| ||||||||| |||||||| |||||||||||| |
|
|
| T |
21792131 |
ctctcctaactccagatctgtactgccatgatggatgggacctattgatacaaaccttgggatgtaatgcttctcaaaattttctctctttctgagatac |
21792032 |
T |
|
| Q |
215 |
tcttgcacccttcgtatctttggccgtgaactttcgggtgttggatttgtatctatgta |
273 |
Q |
| |
|
||| ||||||| |||||||||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
21792031 |
tctgccaccctttgtatctttggttttgaacttgggggtgttggatttgtatctatgta |
21791973 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 7 - 273
Target Start/End: Complemental strand, 15713851 - 15713585
Alignment:
| Q |
7 |
aaaatgacccttcagtttatcaatgttatcaacaatgtttttgtgtagatccctct-gaatgcttccagtgtttttgatgtattttgctgcccacataag |
105 |
Q |
| |
|
|||||||| |||||||| ||||||||||||| |||| |||||||| || ||| ||| ||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
15713851 |
aaaatgacacttcagttcatcaatgttatcagcaatctttttgtgcagttcc-tctagaatgcttccagtgtttttgatgtattttgccgcccacataag |
15713753 |
T |
|
| Q |
106 |
cttgtacttctctcctaactttagatgtttattgccatgatggataggacctattgacatcaacctcggggtgtaatacttctcaaatttttctctattt |
205 |
Q |
| |
|
|||||||||||| ||| ||||||||| | ||||| ||||||||||||| |||||||| | |||| | || | ||||| | ||||| | |||| || ||| |
|
|
| T |
15713752 |
cttgtacttctcccctgactttagatttgtattgtcatgatggatagggcctattgaaaccaacttaggtgcgtaatgcatctcataatttttacttttt |
15713653 |
T |
|
| Q |
206 |
ctgagatactcttgcacccttcgtatctttggccgtgaactttcgggtgttggatttgtatctatgta |
273 |
Q |
| |
|
|||||||| || |||||||| |||||||||| |||||||||| ||||||| | ||||||| |||||| |
|
|
| T |
15713652 |
ctgagatagcctggcaccctttgtatctttggtcgtgaactttggggtgtttgctttgtatttatgta |
15713585 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 6 - 253
Target Start/End: Complemental strand, 21664327 - 21664080
Alignment:
| Q |
6 |
caaaatgacccttcagtttatcaatgttatcaacaatgtttttgtgtagatccctctgaatgcttccagtgtttttgatgtattttgctgcccacataag |
105 |
Q |
| |
|
|||||||||||||||||| ||| |||||||||| ||| |||||||||||||||| || || || || |||| ||||||||||||||||||||||| |
|
|
| T |
21664327 |
caaaatgacccttcagttcatcgatgttatcaaaaatctttttgtgtagatcccgtggattgagtcttgtattttcaatgtattttgctgcccacataag |
21664228 |
T |
|
| Q |
106 |
cttgtacttctctcctaactttagatgtttattgccatgatggataggacctattgacatcaacctcggggtgtaatacttctcaaatttttctctattt |
205 |
Q |
| |
|
|||||||||| |||||||||| |||| | |||||||||||||||||||||||||||||| ||| | || | ||||||||||||||| |||| ||| ||| |
|
|
| T |
21664227 |
cttgtacttccctcctaacttcagatctgtattgccatgatggataggacctattgacaggaacttgggtgagtaatacttctcaaagttttttctgttt |
21664128 |
T |
|
| Q |
206 |
ctgagatactcttgcacccttcgtatctttggccgtgaactttcgggt |
253 |
Q |
| |
|
||||||| | | |||||||| |||||||||| |||||||||| |||| |
|
|
| T |
21664127 |
ctgagattgtgtggcaccctttgtatctttggtcgtgaactttggggt |
21664080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 6 - 256
Target Start/End: Complemental strand, 21788458 - 21788208
Alignment:
| Q |
6 |
caaaatgacccttcagtttatcaatgttatcaacaatgtttttgtgtagatccctctg-aatgcttccagtgtttttgatgtattttgctgcccacataa |
104 |
Q |
| |
|
|||||||||||||||||| |||||||||||| |||| |||||||| |||||| |||| |||| ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
21788458 |
caaaatgacccttcagttcatcaatgttatctgcaatctttttgtgcagatcc-tctggaatgtgtccagtgttttcgatgtattttgctgcccacataa |
21788360 |
T |
|
| Q |
105 |
gcttgtacttctctcctaactttagatgtttattgccatgatggataggacctattgacatcaacctcggggtgtaatacttctcaaatttttctctatt |
204 |
Q |
| |
|
|||||||||||||||||||||| | || | | ||| |||||||||||||||||| |||| |||| | || | ||||| ||||||||| |||| |||||| |
|
|
| T |
21788359 |
gcttgtacttctctcctaacttcaaatttgtgttgtcatgatggataggacctaccgacaacaacttgggcgagtaatgcttctcaaagttttttctatt |
21788260 |
T |
|
| Q |
205 |
tctgagatactcttgcacccttcgtatctttggccgtgaactttcgggtgtt |
256 |
Q |
| |
|
||||||||||||| ||||||| |||| || || |||||| ||| ||||||| |
|
|
| T |
21788259 |
tctgagatactctgccaccctttgtattttcggtcgtgaattttggggtgtt |
21788208 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 7 - 262
Target Start/End: Complemental strand, 21623421 - 21623160
Alignment:
| Q |
7 |
aaaatgacccttcagtttatcaatgttatcaacaatgtttttgtgtagatccctctgaatgcttccagtgtttttgatgtattttgctgcccacataagc |
106 |
Q |
| |
|
||||||||||||||||| |||||| |||||| |||| || ||||| | |||| |||||| ||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
21623421 |
aaaatgacccttcagttcatcaatattatcagcaatcttgttgtgcatatccttctgaacttttctggtgtttttgatgtattttgctgcccacataagc |
21623322 |
T |
|
| Q |
107 |
ttgtacttctctcctaactttagatgtttattgccatgatggataggacctattgacatcaacctcggggtgtaatacttctcaaatttttctctatt-- |
204 |
Q |
| |
|
|||||||||||||||||||| |||| | |||||||||||||||||||||||||||||| |||| | || | ||||| ||| |||| | |||||| |
|
|
| T |
21623321 |
ttgtacttctctcctaacttcagatttgtattgccatgatggataggacctattgacaccaacttgggtgagtaatgcttggcaaaaaaatttctatttc |
21623222 |
T |
|
| Q |
205 |
----tctgagatactcttgcacccttcgtatctttggccgtgaactttcgggtgttggattt |
262 |
Q |
| |
|
|| || ||||||| ||||||| |||||||||| |||||||||||||||||||||||| |
|
|
| T |
21623221 |
cgaatccgacatactctgccaccctttgtatctttggtcgtgaactttcgggtgttggattt |
21623160 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 7 - 242
Target Start/End: Complemental strand, 21704871 - 21704636
Alignment:
| Q |
7 |
aaaatgacccttcagtttatcaatgttatcaacaatgtttttgtgtagatccctctg-aatgcttccagtgtttttgatgtattttgctgcccacataag |
105 |
Q |
| |
|
|||| |||||||||||| |||||||||||| |||| ||||||||||| ||| |||| ||| ||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
21704871 |
aaaacgacccttcagttcatcaatgttatctgcaatctttttgtgtagttcc-tctggaataagtccggtgttttctatgtattttgctgcccacataag |
21704773 |
T |
|
| Q |
106 |
cttgtacttctctcctaactttagatgtttattgccatgatggataggacctattgacatcaacctcggggtgtaatacttctcaaatttttctctattt |
205 |
Q |
| |
|
||||||||||||||||||||| ||| | |||| ||||||||||||||||||| |||| ||| | || | ||||| || |||||| |||| |||| || |
|
|
| T |
21704772 |
cttgtacttctctcctaacttcagagttggattgtcatgatggataggacctatcgacactaacttgggtgagtaatgctgctcaaagttttttctactt |
21704673 |
T |
|
| Q |
206 |
ctgagatactcttgcacccttcgtatctttggccgtg |
242 |
Q |
| |
|
||||||||||||||||||||| |||||||||| |||| |
|
|
| T |
21704672 |
ctgagatactcttgcaccctttgtatctttggtcgtg |
21704636 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 6 - 263
Target Start/End: Original strand, 21808084 - 21808341
Alignment:
| Q |
6 |
caaaatgacccttcagtttatcaatgttatcaacaatgtttttgtgtagatccctct-gaatgcttccagtgtttttgatgtattttgctgcccacataa |
104 |
Q |
| |
|
|||||||||||||||||| ||| ||||||||| |||| ||||||||||||||| ||| |||| || |||||| |||||||| || | |||||||| |
|
|
| T |
21808084 |
caaaatgacccttcagttcatcgatgttatcagcaatctttttgtgtagatcc-tctagaataaagccgctgttttctatgtatttcgcagaccacataa |
21808182 |
T |
|
| Q |
105 |
gcttgtacttctctcctaactttagatgtttattgccatgatggataggacctattgacatcaacctcggggtgtaatacttctcaaatttttctctatt |
204 |
Q |
| |
|
|||||||||||||||||||||| |||| | |||| ||||||||||||||||||||||| | |||| | || | ||||| |||||||| ||| |||||| |
|
|
| T |
21808183 |
gcttgtacttctctcctaacttcagatttatatttccatgatggataggacctattgataccaacttgggtgagtaatgcttctcaagatttgttctatt |
21808282 |
T |
|
| Q |
205 |
tctgagatactcttgcacccttcgtatctttggccgtgaactttcgggtgttggatttg |
263 |
Q |
| |
|
|||||||||||| ||||||| |||||||||| |||||| ||| |||| || |||||| |
|
|
| T |
21808283 |
tctgagatactcagccaccctttgtatctttggtcgtgaattttggggtatttgatttg |
21808341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 7 - 253
Target Start/End: Complemental strand, 21785634 - 21785388
Alignment:
| Q |
7 |
aaaatgacccttcagtttatcaatgttatcaacaatgtttttgtgtagatccctctgaatgcttccagtgtttttgatgtattttgctgcccacataagc |
106 |
Q |
| |
|
||||||||||||||||| || ||||||||| |||| |||||||||||||| | || ||| || | || | || ||||||||| |||||||||||| |
|
|
| T |
21785634 |
aaaatgacccttcagttcattaatgttatcggcaatctttttgtgtagatcgcgtggattgcggcctatattctcgaggtattttgcggcccacataagc |
21785535 |
T |
|
| Q |
107 |
ttgtacttctctcctaactttagatgtttattgccatgatggataggacctattgacatcaacctcggggtgtaatacttctcaaatttttctctatttc |
206 |
Q |
| |
|
||||||||||||||| ||| |||| | |||| |||||||||||||||||||||||| ||| | || | ||||| ||||||||| |||| ||||||| |
|
|
| T |
21785534 |
ttgtacttctctcctgtcttcagatttggattgtcatgatggataggacctattgacactaacttgggtgagtaatgcttctcaaagtttttcctatttc |
21785435 |
T |
|
| Q |
207 |
tgagatactcttgcacccttcgtatctttggccgtgaactttcgggt |
253 |
Q |
| |
|
| |||||||||||||||||| |||||||||| |||||| ||| |||| |
|
|
| T |
21785434 |
ttagatactcttgcaccctttgtatctttggtcgtgaattttggggt |
21785388 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 6 - 234
Target Start/End: Complemental strand, 21726125 - 21725897
Alignment:
| Q |
6 |
caaaatgacccttcagtttatcaatgttatcaacaatgtttttgtgtagatccctct-gaatgcttccagtgtttttgatgtattttgctgcccacataa |
104 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| |||| ||||||||||||| ||||| ||||| ||| ||||||| |||||||||||||||||||||| |
|
|
| T |
21726125 |
caaaatgacccttcagttcatcaatgttatcagcaatctttttgtgtagat-cctctggaatgtgtccggtgttttctatgtattttgctgcccacataa |
21726027 |
T |
|
| Q |
105 |
gcttgtacttctctcctaactttagatgtttattgccatgatggataggacctattgacatcaacctcggggtgtaatacttctcaaatttttctctatt |
204 |
Q |
| |
|
| ||||||| |||| |||| | |||| | | || |||||| |||||||||||||||| || | || | ||||| ||||||||| |||| |||||| |
|
|
| T |
21726026 |
gtttgtactactctgctaatatcagatttgtgttctgatgatgaataggacctattgacacacacttgggtgagtaatgcttctcaaagttttttctatt |
21725927 |
T |
|
| Q |
205 |
tctgagatactcttgcacccttcgtatctt |
234 |
Q |
| |
|
||||||| ||| | |||||||| ||||||| |
|
|
| T |
21725926 |
tctgagagactttagcaccctttgtatctt |
21725897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 7 - 242
Target Start/End: Complemental strand, 21628353 - 21628118
Alignment:
| Q |
7 |
aaaatgacccttcagtttatcaatgttatcaacaatgtttttgtgtagatccctctg-aatgcttccagtgtttttgatgtattttgctgcccacataag |
105 |
Q |
| |
|
|||| |||||||||||| ||||||||||||| |||| ||||||||||| ||| |||| ||| |||| |||||| |||||||||| |||||||| ||| |
|
|
| T |
21628353 |
aaaacgacccttcagttcatcaatgttatcagcaatctttttgtgtagttcc-tctggaataagtccaatgttttctatgtattttgatgcccacacaag |
21628255 |
T |
|
| Q |
106 |
cttgtacttctctcctaactttagatgtttattgccatgatggataggacctattgacatcaacctcggggtgtaatacttctcaaatttttctctattt |
205 |
Q |
| |
|
||||||||||||||||| || |||| | || ||||||||||||||||||||||||||| ||| | || | |||||||||| |||| | || | ||||| |
|
|
| T |
21628254 |
cttgtacttctctcctatgttcagatttgtactgccatgatggataggacctattgacacaaacttgggtgagtaatacttcccaaaatcttttttattt |
21628155 |
T |
|
| Q |
206 |
ctgagatactcttgcacccttcgtatctttggccgtg |
242 |
Q |
| |
|
||||||| || ||||||| |||||||||| |||| |
|
|
| T |
21628154 |
ctgagatgatcggccaccctttgtatctttggtcgtg |
21628118 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 209
Target Start/End: Complemental strand, 21714412 - 21714209
Alignment:
| Q |
6 |
caaaatgacccttcagtttatcaatgttatcaacaatgtttttgtgtagatccctctg-aatgcttccagtgtttttgatgtattttgctgcccacataa |
104 |
Q |
| |
|
|||||||||||||||||| |||||||||||| |||| ||||||||||||||| |||| |||| || ||||||| |||||||||||||||||||||| |
|
|
| T |
21714412 |
caaaatgacccttcagttcatcaatgttatctgcaatctttttgtgtagatcc-tctggaatgtgtctggtgttttctatgtattttgctgcccacataa |
21714314 |
T |
|
| Q |
105 |
gcttgtacttctctcctaactttagatgtttattgccatgatggataggacctattgacatcaacctcggggtgtaatacttctcaaatttttctctatt |
204 |
Q |
| |
|
| ||||||||||||||| ||| |||| | |||| |||||||||||||||||| ||||| ||| | || | ||||| ||||||||| ||| |||||| |
|
|
| T |
21714313 |
gtttgtacttctctcctttcttcagatttggattgtcatgatggataggacctaatgacacaaacttgggtgagtaatgcttctcaaaatttgttctatt |
21714214 |
T |
|
| Q |
205 |
tctga |
209 |
Q |
| |
|
||||| |
|
|
| T |
21714213 |
tctga |
21714209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 83 - 256
Target Start/End: Complemental strand, 21652221 - 21652048
Alignment:
| Q |
83 |
atgtattttgctgcccacataagcttgtacttctctcctaactttagatgtttattgccatgatggataggacctattgacatcaacctcggggtgtaat |
182 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||||||| || | || | ||||| |||||||||||||||||||||| | ||| | |||||||||| |
|
|
| T |
21652221 |
atgtattttgctgcccacataagcttatactcctctcctggtttcatatttgtattgtcatgatggataggacctattgaaacaaacttgggggtgtaat |
21652122 |
T |
|
| Q |
183 |
acttctcaaatttttctctatttctgagatactcttgcacccttcgtatctttggccgtgaactttcgggtgtt |
256 |
Q |
| |
|
|||||||| || | ||||||||||||||||| | |||||||| |||||||||| |||||| ||| ||||||| |
|
|
| T |
21652121 |
gtttctcaaaattgtttctatttctgagatactgtggcaccctttgtatctttggtcgtgaattttggggtgtt |
21652048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 234
Target Start/End: Complemental strand, 21772190 - 21771962
Alignment:
| Q |
6 |
caaaatgacccttcagtttatcaatgttatcaacaatgtttttgtgtagatccctct-gaatgcttccagtgtttttgatgtattttgctgcccacataa |
104 |
Q |
| |
|
|||||||||||||||||| ||||||||||||| |||| ||||||||||||| ||||| ||||| ||| | |||| |||||||||||||||||||||| |
|
|
| T |
21772190 |
caaaatgacccttcagttcatcaatgttatcagcaatctttttgtgtagat-cctctggaatgtatccgttattttctatgtattttgctgcccacataa |
21772092 |
T |
|
| Q |
105 |
gcttgtacttctctcctaactttagatgtttattgccatgatggataggacctattgacatcaacctcggggtgtaatacttctcaaatttttctctatt |
204 |
Q |
| |
|
| |||||||||||| |||| | |||| | | || |||||| |||||||||||||||| || | || | ||||| ||||||||| |||| |||||| |
|
|
| T |
21772091 |
gtttgtacttctctgctaatatcagatttgtgttatgatgatgaataggacctattgacacacacttgggtgagtaatgcttctcaaagttttttctatt |
21771992 |
T |
|
| Q |
205 |
tctgagatactcttgcacccttcgtatctt |
234 |
Q |
| |
|
||||||| ||| | |||||||| ||||||| |
|
|
| T |
21771991 |
tctgagagactttagcaccctttgtatctt |
21771962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 7 - 233
Target Start/End: Complemental strand, 21992410 - 21992175
Alignment:
| Q |
7 |
aaaatgacccttcagtttatcaatgttatcaacaatgtttttgtgtagatccctctgaatgcttccagtgtttttgatgtattttgctgcccacataagc |
106 |
Q |
| |
|
||||||||||||||||| |||||||||||| | ||| |||||||||||||| | || | ||| | |||| ||||||||||||||||||| ||||| |
|
|
| T |
21992410 |
aaaatgacccttcagttcatcaatgttatcgataatctttttgtgtagatcgcatggattaagtcctgcattttcgatgtattttgctgcccacgtaagc |
21992311 |
T |
|
| Q |
107 |
ttgtacttctctcctaactttagat---------gtttattgccatgatggataggacctattgacatcaacctcggggtgtaatacttctcaaattttt |
197 |
Q |
| |
|
|||||||||||||||||||| |||| | |||||||||||||||||||||||||||||| ||| | || | ||| | ||||||||| | || |
|
|
| T |
21992310 |
ttgtacttctctcctaacttcagatttgcattgcttgtattgccatgatggataggacctattgacaccaatttgggtgagtagtgcttctcaaagtctt |
21992211 |
T |
|
| Q |
198 |
ctctatttctgagatactcttgcacccttcgtatct |
233 |
Q |
| |
|
||||||| ||||||||||| ||||||| |||||| |
|
|
| T |
21992210 |
ttctatttttgagatactctgccaccctttgtatct |
21992175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 7 - 235
Target Start/End: Complemental strand, 21745760 - 21745532
Alignment:
| Q |
7 |
aaaatgacccttcagtttatcaatgttatcaacaatgtttttgtgtagatccctctgaatgcttccagtgtttttgatgtattttgctgcccacataagc |
106 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||||| |||||||| ||||| || || || || || | || |||||||||||||||||||||| |
|
|
| T |
21745760 |
aaaacgacccttcagttcatcaatgttatcaacaatctttttgtgcagatcgtgtggattgtggcctgtattctcgaggtattttgctgcccacataagc |
21745661 |
T |
|
| Q |
107 |
ttgtacttctctcctaactttagatgtttattgccatgatggataggacctattgacatcaacctcggggtgtaatacttctcaaatttttctctatttc |
206 |
Q |
| |
|
|| |||| |||||| |||||||| | |||| |||||||||||||||||| ||||| |||| | || | ||||| ||||||||| ||| ||||||| |
|
|
| T |
21745660 |
ttatactcttctcctgtctttagatttggattgtcatgatggataggacctaatgacaccaacttgggtgagtaatgcttctcaaaatttgttctattta |
21745561 |
T |
|
| Q |
207 |
tgagatactcttgcacccttcgtatcttt |
235 |
Q |
| |
|
|||||| ||| ||||||| |||||||| |
|
|
| T |
21745560 |
tgagatggtctaccaccctttgtatcttt |
21745532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 21764223 - 21764128
Alignment:
| Q |
74 |
gtgtttttgatgtattttgctgcccacataagcttgtacttctctcctaactttagatgtttattgccatgatggataggacctattgacatcaac |
169 |
Q |
| |
|
||||||| ||||||| |||||||||| ||||||||||||||||||||||||| |||| | || |||||||||||||||||||||||| |||| |
|
|
| T |
21764223 |
gtgttttctatgtattctgctgcccacttaagcttgtacttctctcctaacttcagatctgatctgtcatgatggataggacctattgacaacaac |
21764128 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0182
Description:
Target: scaffold0182; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 73 - 169
Target Start/End: Complemental strand, 25472 - 25376
Alignment:
| Q |
73 |
agtgtttttgatgtattttgctgcccacataagcttgtacttctctcctaactttagatgtttattgccatgatggataggacctattgacatcaac |
169 |
Q |
| |
|
|||||||| ||||||| |||||||||| ||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||||| |||| |
|
|
| T |
25472 |
agtgttttctatgtattctgctgcccacttaagcttgtacttctctcctaacttcagatttttattgtcatgatggataggacctattgacaccaac |
25376 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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