View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5177-Insertion-2 (Length: 212)
Name: NF5177-Insertion-2
Description: NF5177
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5177-Insertion-2 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 167; Significance: 1e-89; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 27 - 212
Target Start/End: Complemental strand, 32889235 - 32889049
Alignment:
| Q |
27 |
attgagatgtccttgtttaacaacatggtgattcatttttagtactaatttaaaatattttcatgttatcgtttatttggtgctgctgagttccacttaa |
126 |
Q |
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| T |
32889235 |
attgagatgtccttgtttaacaacattgtgattcatttttagtactaatttaaaatattttcatgttatcgtttatttggtgctgctgagttccacttaa |
32889136 |
T |
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| Q |
127 |
caacatgatgattcattcttacaattaatttaaaataattttatactctcgattattt-gcaccgagttccacttaaaaacatgtgg |
212 |
Q |
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| T |
32889135 |
caacatgatgattcatttttacaactaatttaaaataattttatactctcgattatttggcaccgagttccacttaaaaacatgtgg |
32889049 |
T |
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