View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5177_low_6 (Length: 326)
Name: NF5177_low_6
Description: NF5177
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5177_low_6 |
 | |
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| [»] scaffold0182 (1 HSPs) |
| | |
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Alignment Details
Target: chr7 (Bit Score: 279; Significance: 1e-156; HSPs: 22)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 279; E-Value: 1e-156
Query Start/End: Original strand, 18 - 316
Target Start/End: Original strand, 21689636 - 21689934
Alignment:
| Q |
18 |
cattttgatgacgatgttttaacattgaccagaaattctctcgaaggctttgatagtcttgaagaaaagctatcgtggatgttgttggtggatggatgct |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21689636 |
cattttgatgacgatgttttaacattgaccggaaattctctcgaaggctttgatagtcttgaagaaaagctatcgtggatgttgttggtggatggatgct |
21689735 |
T |
|
| Q |
118 |
ctttgctttatatcttggagaaaggcaggcttgttgaaccagggcctatggatattaaggttgatcaactagctattgtgatggtggatgtgcttttgtt |
217 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21689736 |
ctttgctttatatcttggagaaagacaggcttgttgaaccagggcctatggatattaaggttgatcaactagctattgtgatggtggatgtgcttttgtt |
21689835 |
T |
|
| Q |
218 |
agagaatcaacttccttatcaagtactcgagctattgtggaaagataacaacaagagtgaattgataaaaagcatgacgaatttccttgagtgtctctg |
316 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| |
|
|
| T |
21689836 |
agagaatcaacttccttatgaagtactcgagctattgtggaaagataacaacaagagtgaattgataaaaagcacgacgaatttcctcgagtgtctctg |
21689934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 54 - 304
Target Start/End: Original strand, 21714442 - 21714692
Alignment:
| Q |
54 |
tctctcgaaggctttgatagtcttgaagaaaagctatcgtggatgttgttggtggatggatgctctttgctttatatcttggagaaaggcaggcttgttg |
153 |
Q |
| |
|
||||| |||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||| |||||||||||| || || ||||| || |
|
|
| T |
21714442 |
tctcttgaaggctttggtagccttgaagaaaagctatcgtggatgttgttcgtggatggatgttctttgcttcatatcttggagagagccaagcttgatg |
21714541 |
T |
|
| Q |
154 |
aaccagggcctatggatattaaggttgatcaactagctattgtgatggtggatgtgcttttgttagagaatcaacttccttatcaagtactcgagctatt |
253 |
Q |
| |
|
||||||||| ||| |||| |||||||||||||| | | |||| ||| |||||||||||||||| ||||||||||||||||||||||||||| ||||||| |
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|
| T |
21714542 |
aaccagggcaaatgaatatcaaggttgatcaacttgttcttgtaatgatggatgtgcttttgttggagaatcaacttccttatcaagtactcaagctatt |
21714641 |
T |
|
| Q |
254 |
gtggaaagataacaacaagagtgaattgataaaaagcatgacgaatttcct |
304 |
Q |
| |
|
|||||||||| | || |||||| ||||||||||||||||| ||||||||| |
|
|
| T |
21714642 |
gtggaaagatgaagaccagagtggattgataaaaagcatgatgaatttcct |
21714692 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 27 - 304
Target Start/End: Original strand, 21681882 - 21682159
Alignment:
| Q |
27 |
gacgatgttttaacattgaccagaaattctctcgaaggctttgatagtcttgaagaaaagctatcgtggatgttgttggtggatggatgctctttgcttt |
126 |
Q |
| |
|
|||||||||||||| || ||| | | ||||| ||||||| | |||| |||||||||||| |||| ||||||||||| ||||||||||| |||||||| |
|
|
| T |
21681882 |
gacgatgttttaactttaaccggcgagtctcttgaaggctatcatagccttgaagaaaagttatcatggatgttgttcgtggatggatgttctttgctac |
21681981 |
T |
|
| Q |
127 |
atatcttggagaaaggcaggcttgttgaaccagggcctatggatattaaggttgatcaactagctattgtgatggtggatgtgcttttgttagagaatca |
226 |
Q |
| |
|
|||||||||||||| || |||| ||||||||||| ||| || |||||||||||||||| | | |||||||| |||||||||||||||| |||||||| |
|
|
| T |
21681982 |
atatcttggagaaaaccatgctttatgaaccagggcacatgaatgttaaggttgatcaactggttcttgtgatgatggatgtgcttttgttggagaatca |
21682081 |
T |
|
| Q |
227 |
acttccttatcaagtactcgagctattgtggaaagataacaacaagagtgaattgataaaaagcatgacgaatttcct |
304 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||| ||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
21682082 |
acttccttatcaagtactcaagctattgtggaaagatagcaatgagagtgaattgataaaaattatgacgaatttcct |
21682159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 30 - 304
Target Start/End: Original strand, 21785641 - 21785915
Alignment:
| Q |
30 |
gatgttttaacattgaccagaaattctctcgaaggctttgatagtcttgaagaaaagctatcgtggatgttgttggtggatggatgctctttgctttata |
129 |
Q |
| |
|
||||||||||| || ||| | | ||||| |||| ||||| ||| |||||||||||||| |||||||||||||| ||||||||||| |||||||| ||| |
|
|
| T |
21785641 |
gatgttttaactttaaccggccagtctcttgaagactttggtagccttgaagaaaagctgtcgtggatgttgtttgtggatggatgttctttgctacata |
21785740 |
T |
|
| Q |
130 |
tcttggagaaaggcaggcttgttgaaccagggcctatggatattaaggttgatcaactagctattgtgatggtggatgtgcttttgttagagaatcaact |
229 |
Q |
| |
|
|||||||||||| || |||| || |||||||| ||| ||||||||||||||||||| | | |||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
21785741 |
tcttggagaaagccaagcttcatgtaccagggcaaatgaatattaaggttgatcaactggttcttgtgatgatggatgtgcttttgttggagaatcaact |
21785840 |
T |
|
| Q |
230 |
tccttatcaagtactcgagctattgtggaaagataacaacaagagtgaattgataaaaagcatgacgaatttcct |
304 |
Q |
| |
|
||||||| |||| ||| | |||||||||||||||| | || |||||||||||||||||||||||| ||||||||| |
|
|
| T |
21785841 |
tccttatgaagtcctcaaactattgtggaaagatagcgacgagagtgaattgataaaaagcatgaagaatttcct |
21785915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 75 - 297
Target Start/End: Original strand, 21628405 - 21628630
Alignment:
| Q |
75 |
cttgaagaaaagctatcgtggatgttgttggtggatggatgctctttgctttatatcttggagaaaggcaggcttgttgaa----ccagggcctatggat |
170 |
Q |
| |
|
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | | ||||| || ||| ||||||||||| |
|
|
| T |
21628405 |
cttgaagaaaagctgtcgtggatgttgttcgtggatggatgctctttgctttatatcttggagaaagttacg-ttgtttaatgacccaaggcctatggat |
21628503 |
T |
|
| Q |
171 |
attaaggttgatcaactagctattgtgatggtggatgtgcttttgttagagaatcaacttccttatcaagtactcgagctattgtggaaagataacaaca |
270 |
Q |
| |
|
|||||| |||||||||| | | |||||||| |||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||| |
|
|
| T |
21628504 |
attaagcttgatcaactggttcttgtgatgatggatgtgcttttgttggagaatcaacttccttatgaagtactcaagctattgtggaaagataacaatg |
21628603 |
T |
|
| Q |
271 |
agagtgaattgataaaaagcatgacga |
297 |
Q |
| |
|
||| ||||||||||||| ||||||||| |
|
|
| T |
21628604 |
agaatgaattgataaaatgcatgacga |
21628630 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 18 - 304
Target Start/End: Original strand, 21772184 - 21772470
Alignment:
| Q |
18 |
cattttgatgacgatgttttaacattgaccagaaattctctcgaaggctttgatagtcttgaagaaaagctatcgtggatgttgttggtggatggatgct |
117 |
Q |
| |
|
|||||||| || ||||||||||| | |||||| ||||| | ||||||| ||| |||||||||||| | |||||||||||||| ||||||||||| | |
|
|
| T |
21772184 |
cattttgacgatgatgttttaacttcaaccagatggtctcttgcaggctttcgtagccttgaagaaaagttgtcgtggatgttgttcgtggatggatgtt |
21772283 |
T |
|
| Q |
118 |
ctttgctttatatcttggagaaaggcaggcttgttgaaccagggcctatggatattaaggttgatcaactagctattgtgatggtggatgtgcttttgtt |
217 |
Q |
| |
|
||||||| |||||||||||||||| | ||| ||||||| ||| ||| ||||||||||||||||||| | | |||||||| |||||||||||||||| |
|
|
| T |
21772284 |
ctttgctgtatatcttggagaaagcgaatcttaatgaaccatggcacatgaatattaaggttgatcaactggttcttgtgatgatggatgtgcttttgtt |
21772383 |
T |
|
| Q |
218 |
agagaatcaacttccttatcaagtactcgagctattgtggaaagataacaacaagagtgaattgataaaaagcatgacgaatttcct |
304 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||| | || |||||| |||||| ||||||||| ||||||||| |
|
|
| T |
21772384 |
ggagaatcaacttccttatcaagtactcaagctattgtggaaagatgaagacgagagtggcttgatagaaagcatgatgaatttcct |
21772470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 26 - 294
Target Start/End: Original strand, 21992413 - 21992681
Alignment:
| Q |
26 |
tgacgatgttttaacattgaccagaaattctctcgaaggctttgatagtcttgaagaaaagctatcgtggatgttgttggtggatggatgctctttgctt |
125 |
Q |
| |
|
||||||||||||||| || | |||| ||||| |||||||||| || || ||||||||||| || ||||||||||| ||||||||||| |||||| | |
|
|
| T |
21992413 |
tgacgatgttttaactttagctggaaagtctcttgaaggctttggaagcctcgaagaaaagctgtcatggatgttgttcgtggatggatgttctttgttg |
21992512 |
T |
|
| Q |
126 |
tatatcttggagaaaggcaggcttgttgaaccagggcctatggatattaaggttgatcaactagctattgtgatggtggatgtgcttttgttagagaatc |
225 |
Q |
| |
|
|||||||| ||||||| || ||||| |||||| |||| ||| ||||||| ||||||||||| | | |||||||| ||||||||||| |||| ||||||| |
|
|
| T |
21992513 |
tatatcttagagaaagccaagcttgatgaacctgggcacatgaatattaaagttgatcaactggttcttgtgatgatggatgtgcttctgttggagaatc |
21992612 |
T |
|
| Q |
226 |
aacttccttatcaagtactcgagctattgtggaaagataacaacaagagtgaattgataaaaagcatga |
294 |
Q |
| |
|
|||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
21992613 |
aacttccttacgtagtactcaagctattgtggaaagataacaatgagagtgaattgataaaaagcatga |
21992681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 18 - 303
Target Start/End: Complemental strand, 21808090 - 21807802
Alignment:
| Q |
18 |
cattttgatgacgatgttttaacattgaccagaaattctctcgaaggctttgatagtcttgaagaaaagctatcgtggatgttgttggtggatggatgct |
117 |
Q |
| |
|
||||||| |||||||||||||| || ||| | | ||||| |||||||||| ||| |||||||||||||| || ||||||||||| ||||||||||||| |
|
|
| T |
21808090 |
cattttggcgacgatgttttaactttaaccggccagtctcttgaaggctttggtagccttgaagaaaagctgtcatggatgttgttcgtggatggatgct |
21807991 |
T |
|
| Q |
118 |
ctttgctttatatcttggagaaaggca---ggcttgttgaaccagggcctatggatattaaggttgatcaactagctattgtgatggtggatgtgctttt |
214 |
Q |
| |
|
||||||||||||||||||||| || || || ||| ||| ||||||| | ||||||||||| |||||||||| | | || |||| |||||||||||| |
|
|
| T |
21807990 |
ctttgctttatatcttggagacagtcatgtggtttgatgagccagggcatgtggatattaagcttgatcaactggttcttctgataacggatgtgctttt |
21807891 |
T |
|
| Q |
215 |
gttagagaatcaacttccttatcaagtactcgagctattgtggaaagataacaacaagagtgaattgataaaaagcatgacgaatttcc |
303 |
Q |
| |
|
||| ||||||||||| |||||| ||||||| ||||||||||| |||||||||| || ||||||||||||||| ||||| |||||||| |
|
|
| T |
21807890 |
gttggagaatcaactgccttataaagtacttaagctattgtgggaagataacaatgagggtgaattgataaaaatcatgaggaatttcc |
21807802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 18 - 302
Target Start/End: Original strand, 21726119 - 21726403
Alignment:
| Q |
18 |
cattttgatgacgatgttttaacattgaccagaaattctctcgaaggctttgatagtcttgaagaaaagctatcgtggatgttgttggtggatggatgct |
117 |
Q |
| |
|
|||||||| |||||||||||| | | |||||| ||||| | ||||||| ||| |||||||||||||| |||||||||||||| ||||||||||| | |
|
|
| T |
21726119 |
cattttgacgacgatgttttagcttcaaccagatggtctcttgcaggctttcgtagccttgaagaaaagctgtcgtggatgttgttcgtggatggatgtt |
21726218 |
T |
|
| Q |
118 |
ctttgctttatatcttggagaaaggcaggcttgttgaaccagggcctatggatattaaggttgatcaactagctattgtgatggtggatgtgcttttgtt |
217 |
Q |
| |
|
||||||| |||||||||||||||| ||| | ||||| ||| ||| |||||| |||||||||||| | | |||||||| |||||||||||||||| |
|
|
| T |
21726219 |
ctttgctgtatatcttggagaaagcggatcttaataaaccatggcacatgaatattagggttgatcaactggttcttgtgatgatggatgtgcttttgtt |
21726318 |
T |
|
| Q |
218 |
agagaatcaacttccttatcaagtactcgagctattgtggaaagataacaacaagagtgaattgataaaaagcatgacgaatttc |
302 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||| |||| | || |||||| ||||||| ||||||||| ||||||| |
|
|
| T |
21726319 |
ggagaatcaacttccttatcaagtactcaagctattgtggacagatgaagacgagagtggattgatagaaagcatgatgaatttc |
21726403 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 18 - 304
Target Start/End: Original strand, 21788452 - 21788735
Alignment:
| Q |
18 |
cattttgatgacgatgttttaacattgaccagaaattctctcgaaggctttgatagtcttgaagaaaagctatcgtggatgttgttggtggatggatgct |
117 |
Q |
| |
|
||||||| |||||||||||||| || || | || ||||| |||||||||| || || ||||||||||| |||||||||||||| ||||||||||| | |
|
|
| T |
21788452 |
cattttggcgacgatgttttaactttaactggcaagtctcttgaaggctttggaagcctcgaagaaaagctgtcgtggatgttgttcgtggatggatgtt |
21788551 |
T |
|
| Q |
118 |
ctttgctttatatcttggagaaaggcaggcttgttgaaccagggcctatggatattaaggttgatcaactagctattgtgatggtggatgtgcttttgtt |
217 |
Q |
| |
|
||||| | |||||||| ||||||| || ||||| |||||| |||| ||| ||||||| ||||||||||| | | |||||||| ||||||||||| |||| |
|
|
| T |
21788552 |
ctttgttgtatatcttagagaaagccaagcttgatgaacctgggcacatgaatattaaagttgatcaactggttcttgtgatgatggatgtgcttctgtt |
21788651 |
T |
|
| Q |
218 |
agagaatcaacttccttatcaagtactcgagctattgtggaaagataacaacaagagtgaattgataaaaagcatgacgaatttcct |
304 |
Q |
| |
|
||||||||||||||||| ||||||| ||||||||||||||||| ||| | |||||||||||||||||||||| || |||||| |
|
|
| T |
21788652 |
ggagaatcaacttccttacgtagtactcaagctattgtggaaagat---aacgatagtgaattgataaaaagcatgatgactttcct |
21788735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 54 - 302
Target Start/End: Original strand, 21664360 - 21664614
Alignment:
| Q |
54 |
tctctcgaaggctttgatagtcttgaagaaaagctatcgtggatgttgttggtggatggatgctctttgctttatatcttgga-gaaag--gca---ggc |
147 |
Q |
| |
|
||||| |||||||||| || |||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||| | | | | | || |
|
|
| T |
21664360 |
tctcttgaaggctttggaagccttgaagaaaagctgtcgtggatattgttcgtggatggatgctctttgctttatatcttggatggatgttgtacgtgga |
21664459 |
T |
|
| Q |
148 |
ttgttgaaccagggcctatggatattaaggttgatcaactagctattgtgatggtggatgtgcttttgttagagaatcaacttccttatcaagtactcga |
247 |
Q |
| |
|
| | ||| |||| ||||||||||||||||||||||||||| | | |||||||| |||||||||||||||| ||||||||||| ||||||||||||||| | |
|
|
| T |
21664460 |
tggatgacccagagcctatggatattaaggttgatcaactggttcttgtgatgatggatgtgcttttgttggagaatcaactaccttatcaagtactcaa |
21664559 |
T |
|
| Q |
248 |
gctattgtggaaagataacaacaagagtgaattgataaaaagcatgacgaatttc |
302 |
Q |
| |
|
|||||||||||||||| | ||||||||| ||||||| ||||||| | ||||||| |
|
|
| T |
21664560 |
gctattgtggaaagatgaagacaagagtggattgatagaaagcatcatgaatttc |
21664614 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 26 - 285
Target Start/End: Original strand, 21623424 - 21623683
Alignment:
| Q |
26 |
tgacgatgttttaacattgaccagaaattctctcgaaggctttgatagtcttgaagaaaagctatcgtggatgttgttggtggatggatgctctttgctt |
125 |
Q |
| |
|
||||||||||||||| || ||| |||| ||||| |||||||||| ||| || |||||||||| |||||||||||||| ||||||||||| |||||||| |
|
|
| T |
21623424 |
tgacgatgttttaactttaaccggaaagtctcttgaaggctttggtagcattaaagaaaagctgtcgtggatgttgttcgtggatggatgttctttgctg |
21623523 |
T |
|
| Q |
126 |
tatatcttggagaaaggcaggcttgttgaaccagggcctatggatattaaggttgatcaactagctattgtgatggtggatgtgcttttgttagagaatc |
225 |
Q |
| |
|
||||| |||| | || || |||| ||||||||||| ||| |||||||| ||||||||| | |||||||| | |||||| ||||||| ||||||| |
|
|
| T |
21623524 |
catatcatggatacagccaagcttcatgaaccagggcagatgaatattaagcttgatcaacggaatcttgtgatgattgatgtggttttgttggagaatc |
21623623 |
T |
|
| Q |
226 |
aacttccttatcaagtactcgagctattgtggaaagataacaacaagagtgaattgataa |
285 |
Q |
| |
|
|||| |||||| |||||||| ||||||||||||||||||||||| ||| ||||||||||| |
|
|
| T |
21623624 |
aactgccttatgaagtactcaagctattgtggaaagataacaacgagaatgaattgataa |
21623683 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 26 - 285
Target Start/End: Original strand, 15713854 - 15714107
Alignment:
| Q |
26 |
tgacgatgttttaacattgaccagaaattctctcgaaggctttgatagtcttgaagaaaagctatcgtggatgttgttggtggatggatgctctttgctt |
125 |
Q |
| |
|
||||||||||||||| || ||| |||| || || |||| |||| ||| || ||||||||||| || ||||||||||| |||||||||||||||||||| |
|
|
| T |
15713854 |
tgacgatgttttaactttaaccggaaagtcacttcaaggatttggtagcctagaagaaaagctgtcatggatgttgttcgtggatggatgctctttgctg |
15713953 |
T |
|
| Q |
126 |
tatatcttggagaaaggcaggcttgttgaaccagggcctatggatattaaggttgatcaactagctattgtgatggtggatgtgcttttgttagagaatc |
225 |
Q |
| |
|
|||||||||| || || ||||| | ||||||| || |||||||| |||||||||| | | ||||||| |||||||||||||||| ||||||| |
|
|
| T |
15713954 |
catatcttggataa---ca---ttgttcacgcagggcccataaatattaagcttgatcaactggatcttgtgataatggatgtgcttttgttggagaatc |
15714047 |
T |
|
| Q |
226 |
aacttccttatcaagtactcgagctattgtggaaagataacaacaagagtgaattgataa |
285 |
Q |
| |
|
||||||||||| |||||||| ||||||||||||||||||||||| ||||||| ||||||| |
|
|
| T |
15714048 |
aacttccttatgaagtactcaagctattgtggaaagataacaacgagagtgagttgataa |
15714107 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 27 - 277
Target Start/End: Original strand, 21652301 - 21652542
Alignment:
| Q |
27 |
gacgatgttttaacattgaccagaaattctctcgaaggctttgatagtcttgaagaaaagctatcgtggatgttgttggtggatggatgctctttgcttt |
126 |
Q |
| |
|
|||||||||||||| || || | || ||||| |||||||||||||| |||||||||||| | |||||||||||||| ||||||||||| || ||||| |
|
|
| T |
21652301 |
gacgatgttttaactttaactggcaagtctcttgaaggctttgatagccttgaagaaaagttgtcgtggatgttgttcgtggatggatgttcgttgctgc |
21652400 |
T |
|
| Q |
127 |
atatcttggagaaaggcaggcttgttgaaccagggcctatggatattaaggttgatcaactagctattgtgatggtggatgtgcttttgttagagaatca |
226 |
Q |
| |
|
||||||||||||||| || ||| |||| |||||| ||| |||||||||||||||||| ||||| |||||||||||||||| || ||||| |
|
|
| T |
21652401 |
atatcttggagaaagccaacgttgatgaagcagggcacatgaatattaaggttgatcaac---------tgatgatggatgtgcttttgttggaaaatca |
21652491 |
T |
|
| Q |
227 |
acttccttatcaagtactcgagctattgtggaaagataacaacaagagtga |
277 |
Q |
| |
|
||||||||||||||||||| |||| ||||||||||| ||||| ||||||| |
|
|
| T |
21652492 |
acttccttatcaagtactcaagcttttgtggaaagacgacaacgagagtga |
21652542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 30 - 294
Target Start/End: Original strand, 21764297 - 21764540
Alignment:
| Q |
30 |
gatgttttaacattgaccagaaattctctcgaaggctttgatagtcttgaagaaaagctatcgtggatgttgttggtggatggatgctctttgctttata |
129 |
Q |
| |
|
||||||||||| || || |||| ||||| ||||||||| |||| |||||||||||| | |||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
21764297 |
gatgttttaactttaactggaaagtctcttgaaggctttcatagccttgaagaaaagttgtcgtggatgttgttcgtggatggatgctctttgctttatc |
21764396 |
T |
|
| Q |
130 |
tcttggagaaaggcaggcttgttgaaccagggcctatggatattaaggttgatcaactagctattgtgatggtggatgtgcttttgttagagaatcaact |
229 |
Q |
| |
|
|||||||||| ||||| ||| | |||||||||| |||||| | | |||||||| |||||||||||||||| ||||||||||| |
|
|
| T |
21764397 |
tcttggagaa------------------agggcacatgaagattaaggttggtcaactggttcttgtgatgatggatgtgcttttgttggagaatcaact |
21764478 |
T |
|
| Q |
230 |
tccttatcaagtactcgagctattgtggaaagataacaacaagagtgaattgataaaaagcatga |
294 |
Q |
| |
|
|||||| |||||||| |||||||||||||| || ||| ||||||||||||||||| |||||| |
|
|
| T |
21764479 |
tccttacgaagtactcaagctattgtggaaa---aataacgagagtgaattgataaaatgcatga |
21764540 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 27 - 304
Target Start/End: Original strand, 21646975 - 21647256
Alignment:
| Q |
27 |
gacgatgttttaacattgaccagaaattctctcgaaggctttgatagtcttgaagaaaagctatcgtggatgttgttggtggat----ggatgctctttg |
122 |
Q |
| |
|
||||| |||||||| |||||| | || ||||| ||||||| ||| |||||||||||| | |||||||| ||||| |||||| ||||| |||||| |
|
|
| T |
21646975 |
gacgacgttttaactttgaccggcaagtctcttaaaggcttccgtagccttgaagaaaagttgtcgtggatattgttcgtggatatatggatgttctttg |
21647074 |
T |
|
| Q |
123 |
ctttatatcttggagaaaggcaggcttgttgaaccagggcctatggatattaaggttgatcaactagctattgtgatggtggatgtgcttttgttagaga |
222 |
Q |
| |
|
|| ||||||| ||||||| || |||| ||||||||||| ||| |||||||||||||| |||| | | |||||||| |||||||||||||||| |||| |
|
|
| T |
21647075 |
ctgcatatcttagagaaagccaagcttcatgaaccagggcagatgaatattaaggttgataaactggttcttgtgatgatggatgtgcttttgttggaga |
21647174 |
T |
|
| Q |
223 |
atcaacttccttatcaagtactcgagctattgtggaaagataacaacaagagtgaattgataaaaagcatgacgaatttcct |
304 |
Q |
| |
|
||||||| ||||| ||||||| | ||||| | |||||||||||| ||| |||||||||||| | ||||| |||||||| |
|
|
| T |
21647175 |
atcaactcccttacatagtactcaaactattattgaaagataacaatgagaatgaattgataaataccatgaaaaatttcct |
21647256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 190 - 302
Target Start/End: Original strand, 21792385 - 21792497
Alignment:
| Q |
190 |
ctattgtgatggtggatgtgcttttgttagagaatcaacttccttatcaagtactcgagctattgtggaaagataacaacaagagtgaattgataaaaag |
289 |
Q |
| |
|
||||||||||| |||||||||||||||| ||||||||||| |||||| |||||||| |||||||||||||||| ||||| |||||| ||| ||| |||| |
|
|
| T |
21792385 |
ctattgtgatgatggatgtgcttttgttggagaatcaactgccttatgaagtactcaagctattgtggaaagacgacaaccagagtgcattaatagaaag |
21792484 |
T |
|
| Q |
290 |
catgacgaatttc |
302 |
Q |
| |
|
||||||||||||| |
|
|
| T |
21792485 |
catgacgaatttc |
21792497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 286
Target Start/End: Original strand, 21745764 - 21746017
Alignment:
| Q |
27 |
gacgatgttttaacattgaccagaaattctctcgaaggctttgatagtcttgaagaaaagctatcgtggatgttgttggtggatggatgctctttgcttt |
126 |
Q |
| |
|
|||||||||||||| || || |||||||||| |||||||||| | |||||||||||||| ||||||||||| || || |||||||| |||||||| |
|
|
| T |
21745764 |
gacgatgttttaactttaactggaaattctcttcaaggctttgaatgccttgaagaaaagctgtcgtggatgttattcgtagatggatgttctttgctcc |
21745863 |
T |
|
| Q |
127 |
atatcttggagaaaggcaggcttgttgaaccagggcctatggatattaaggttgatcaactagctattgtgatggtggatgtgcttttgttagagaatca |
226 |
Q |
| |
|
|||||||||| || || ||||| | ||| | ||| |||||||| |||||| | | | |||||||| | ||||| |||||||| |||||||| |
|
|
| T |
21745864 |
atatcttggataa---ca---ttgttcacccacgagacatgaatattaagcttgatctagttattcttgtgatgatcgatgtacttttgttggagaatca |
21745957 |
T |
|
| Q |
227 |
acttccttatcaagtactcgagctattgtggaaagataacaacaagagtgaattgataaa |
286 |
Q |
| |
|
||| |||||| |||||||| |||||||||| |||||||||||| |||||||||||||||| |
|
|
| T |
21745958 |
actgccttatgaagtactctagctattgtgaaaagataacaacgagagtgaattgataaa |
21746017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 169 - 294
Target Start/End: Original strand, 21705011 - 21705136
Alignment:
| Q |
169 |
atattaaggttgatcaactagctattgtgatggtggatgtgcttttgttagagaatcaacttccttatcaagtactcgagctattgtggaaagataacaa |
268 |
Q |
| |
|
||||||||||||||||||| ||| |||||| || ||||||||||||||| ||||||||||| |||||| |||||||| |||| |||||||||||| | | |
|
|
| T |
21705011 |
atattaaggttgatcaactggctcttgtgagggaggatgtgcttttgttggagaatcaactgccttatgaagtactcaagcttttgtggaaagatgaaga |
21705110 |
T |
|
| Q |
269 |
caagagtgaattgataaaaagcatga |
294 |
Q |
| |
|
|||||| ||| ||||||||||||| |
|
|
| T |
21705111 |
tgagagtggattaataaaaagcatga |
21705136 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 294
Target Start/End: Original strand, 21656895 - 21656950
Alignment:
| Q |
239 |
agtactcgagctattgtggaaagataacaacaagagtgaattgataaaaagcatga |
294 |
Q |
| |
|
||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
21656895 |
agtactcaagctattgtggaaagatgacaacaagagtgaattgataaaaagcatga |
21656950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 30 - 140
Target Start/End: Original strand, 21792246 - 21792356
Alignment:
| Q |
30 |
gatgttttaacattgaccagaaattctctcgaaggctttgatagtcttgaagaaaagctatcgtggatgttgttggtggatggatgctctttgctttata |
129 |
Q |
| |
|
||||||||||| || ||| | || ||||| || ||||||| ||| || ||||||||||| || ||||| ||||| ||||||||||| |||||| | ||| |
|
|
| T |
21792246 |
gatgttttaactttaacccgcaagtctcttgacggctttggtagcctcgaagaaaagctgtcatggatattgttcgtggatggatgttctttgttgcata |
21792345 |
T |
|
| Q |
130 |
tcttggagaaa |
140 |
Q |
| |
|
||||||||||| |
|
|
| T |
21792346 |
tcttggagaaa |
21792356 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 136
Target Start/End: Original strand, 21704878 - 21704984
Alignment:
| Q |
30 |
gatgttttaacattgaccagaaattctctcgaaggctttgatagtcttgaagaaaagctatcgtggatgttgttggtggatggatgctctttgctttata |
129 |
Q |
| |
|
||||||||||| | ||| |||| ||||| |||||||||| | ||||| |||||||| |||||||| ||||| |||||||||| |||||||| ||| |
|
|
| T |
21704878 |
gatgttttaactctaaccggaaactctcttcaaggctttgagtgccttgatgaaaagctgtcgtggatattgttcatggatggatgttctttgctccata |
21704977 |
T |
|
| Q |
130 |
tcttgga |
136 |
Q |
| |
|
||||||| |
|
|
| T |
21704978 |
tcttgga |
21704984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0182
Description:
Target: scaffold0182; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 30 - 302
Target Start/End: Original strand, 25608 - 25880
Alignment:
| Q |
30 |
gatgttttaacattgaccagaaattctctcgaaggctttgatagtcttgaagaaaagctatcgtggatgttgttggtggatggatgctctttgctttata |
129 |
Q |
| |
|
||||||||||| || || | ||| ||||| |||||||||| || |||||||||||||| |||| ||||||||| ||||||||||| |||||||| ||| |
|
|
| T |
25608 |
gatgttttaactttaactaaaaagtctcttgaaggctttggtacccttgaagaaaagctgtcgttgatgttgttcgtggatggatgttctttgctacata |
25707 |
T |
|
| Q |
130 |
tcttggagaaaggcaggcttgttgaaccagggcctatggatattaaggttgatcaactagctattgtgatggtggatgtgcttttgttagagaatcaact |
229 |
Q |
| |
|
|||||||||| | ||| | | | | |||||| ||| ||||||||||||||||||| | ||||||||||||||||| ||||||| || |||||||| |
|
|
| T |
25708 |
tcttggagaatgccagacgtaataacccagggaaaatgaatattaaggttgatcaactttttcttgtgatggtggatgtggttttgttggaaaatcaact |
25807 |
T |
|
| Q |
230 |
tccttatcaagtactcgagctattgtggaaagataacaacaagagtgaattgataaaaagcatgacgaatttc |
302 |
Q |
| |
|
||||||| |||||||| |||||||||||||| | | || |||||||||||||| ||||||||||| ||||| |
|
|
| T |
25808 |
tccttatgaagtactcaagctattgtggaaaaacgagaatgagagtgaattgatacaaagcatgacggatttc |
25880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 60 - 122
Target Start/End: Complemental strand, 18192122 - 18192060
Alignment:
| Q |
60 |
gaaggctttgatagtcttgaagaaaagctatcgtggatgttgttggtggatggatgctctttg |
122 |
Q |
| |
|
||||||||||||| | |||||||||||||| ||||||||||| ||||||||||| |||||| |
|
|
| T |
18192122 |
gaaggctttgataacttggaagaaaagctatcatggatgttgtttgtggatggatgttctttg |
18192060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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