View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5179-Insertion-3 (Length: 782)
Name: NF5179-Insertion-3
Description: NF5179
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5179-Insertion-3 |
 | |
|
| [»] scaffold0294 (2 HSPs) |
| | |
|
| [»] chr2 (1 HSPs) |
| |
|
Alignment Details
Target: scaffold0294 (Bit Score: 391; Significance: 0; HSPs: 2)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 391; E-Value: 0
Query Start/End: Original strand, 7 - 473
Target Start/End: Original strand, 9252 - 9721
Alignment:
| Q |
7 |
aaagagaacttagagaagaaacttacaaaataaatggaagtttttaccatgaaaagtgaaaataatgtgtgaaatgcaaacaacagaaatcaaaattaat |
106 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
9252 |
aaagagaatttagagaagaaacttacaaaataaatggaagtttttaccttgaaaagtgaaaataatgtgtgaaatgcaaacaacacaaatcaaaattaat |
9351 |
T |
|
| Q |
107 |
acctgggactctttccacacaaatatcattttactgttttctaactcaatggaaactaaatttctttgacaaaagtttgaaggtatgaatggtaaaggaa |
206 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
9352 |
acctgggtctctttccacacaaatatcattttactgttttctaactcaatggaaactaaatttctttgataaaagtttgaaggtatgaatggtaaaggaa |
9451 |
T |
|
| Q |
207 |
accctttccaacacagccatcttaattttcttgaaagatactcgaaatctccatcaagttgtactccagcaagttgaagcaatcttagtctctccatctt |
306 |
Q |
| |
|
| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9452 |
atcctttccaacacagccatcttagttttcttgaaagatactcgaaatctccatcaagttgtactccagcaagttgaagcaatcttagtctctccatctt |
9551 |
T |
|
| Q |
307 |
cttaaatgctttagcactaaaacattttgaactagttattggcaacttcaaagctaaaccctcaacagcttttgttccctacgaaatataattgaccaaa |
406 |
Q |
| |
|
|| ||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
9552 |
ctcaaatgattcagcactaaaacattttgaactagttattggcaacttcaaagctagtccctcaacagcttttgttccctatgaaatataattgaccaaa |
9651 |
T |
|
| Q |
407 |
atgtaaaacac--agatacaaaacagatg-aaaaaacatgtgactaaactaaccgtttgttagaagtcat |
473 |
Q |
| |
|
||||||||||| |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
9652 |
atgtaaaacacaaagatacaaaacagatgaaaaaaacatgtgactaaaccgaccgtttgttagaagtcat |
9721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 498 - 780
Target Start/End: Original strand, 9755 - 10034
Alignment:
| Q |
498 |
aattttataagttcttatgtatattaacaaactatattcatgtaacatctaactcataaatctttttagcttacaatgtgttataaaatttaaatcttga |
597 |
Q |
| |
|
||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||| ||||| ||||| |||||||||| |||||||| ||| |
|
|
| T |
9755 |
aattttataagttcttatgtaaatcaacaaactatattcatgtaacaactaactcataaatgtttttcacttac---gtgttataaattttaaatcatga |
9851 |
T |
|
| Q |
598 |
aataggtatattaggtgcttacagttttttcaaataaaacattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattt |
697 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||| |||||||||| | |||||||||| |
|
|
| T |
9852 |
aataggtatatgaggtgcttacagttttttcaaataaaacattaagcacatcctcttgaaaccataacctactacggtcctcaggatcccttggtgattt |
9951 |
T |
|
| Q |
698 |
tttacgaatgatttctcttcccatatcccgtaacaaatcatgcattccaagtgtattcttatcatcgatagttacaaggcttc |
780 |
Q |
| |
|
|| |||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||||| |||||||| |
|
|
| T |
9952 |
ttcacgaatgatttcccttcccatatctcgtaataaatcatgcattccaagtgtattcttatcatcgacagttagaaggcttc |
10034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 320; Significance: 1e-180; HSPs: 42)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 7 - 477
Target Start/End: Complemental strand, 5383055 - 5382600
Alignment:
| Q |
7 |
aaagagaacttagagaagaaacttacaaaataaatggaagtttttaccatgaaaagtgaaaataatgtgtgaaatgcaaacaacagaaatcaaaattaat |
106 |
Q |
| |
|
|||||||| |||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||| |
|
|
| T |
5383055 |
aaagagaatttagagaaaaaacatacaaaataaatggaagtttttaccatgaaaagtgaaaataatgtg--aaatgcaaaaaacagaaatcataattaat |
5382958 |
T |
|
| Q |
107 |
acctgggactctttccacacaaatatcattttactgttttctaactcaatggaaactaaatttctttgacaaaagtttgaaggtatgaatggtaaaggaa |
206 |
Q |
| |
|
||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
5382957 |
acctgggtctctttccacacagatatcattttactgttttctaactctatggaaactaaatttctttgacaaaagtttgaaggtatgaatgataaaggaa |
5382858 |
T |
|
| Q |
207 |
accctttccaacacagccatcttaattttcttgaaagatactcgaaatctccatcaagttgtactccagcaagttgaagcaatcttagtctctccatctt |
306 |
Q |
| |
|
| |||||||||||||| ||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
|
|
| T |
5382857 |
atcctttccaacacagtcatcttagttttcctgaaagatacttgaaatctccatcaagttgtactccagcaagttgaagcaatcttagtctttccatctt |
5382758 |
T |
|
| Q |
307 |
cttaaatgctttagcactaaaacattttgaactagttattggcaacttcaaagctaaaccctcaacagcttttgttccctacgaaatataattgaccaaa |
406 |
Q |
| |
|
|||||||| ||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
5382757 |
cttaaatgttttagtgttaaaacattttgaactagttattggtaacttcaaagctagaccctcaacagcttttgttccctatgaaatataattgaccaaa |
5382658 |
T |
|
| Q |
407 |
atgtaaaacacagatacaaaacagatgaaaaaacatgtgactaaactaaccgtttgttagaagtcataaat |
477 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
5382657 |
atgtaa-------------aacagatgaaaaaacatgtgactaaaccgaccgtttgttagaagtcataaat |
5382600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 133; E-Value: 1e-68
Query Start/End: Original strand, 92 - 416
Target Start/End: Original strand, 5147591 - 5147915
Alignment:
| Q |
92 |
gaaatcaaaattaatacctgggactctttccacacaaatatcattttactgttttctaactcaatggaaactaaatttctttgacaaaagtttgaaggta |
191 |
Q |
| |
|
|||||||||||||||||||||| |||||||||| || | | || || || |||||||||||||||||||||||||||| | || ||||| ||| |||| |
|
|
| T |
5147591 |
gaaatcaaaattaatacctgggtttctttccacagaagtttgatattgctattttctaactcaatggaaactaaatttcctagataaaagcttgtgggta |
5147690 |
T |
|
| Q |
192 |
tgaatggtaaaggaaaccctttccaacacagccatcttaattttcttgaaagatactcgaaatctccatcaagttgtactccagcaagttgaagcaatct |
291 |
Q |
| |
|
|| ||| || |||||| || |||||| | |||||||| | ||||| |||| || || ||||| ||||||||||||||||||| ||||||||||||||| |
|
|
| T |
5147691 |
tgcatgttagaggaaatccattccaagaaagccatctcagatttctcgaaatgtattcaaaatccccatcaagttgtactccagtaagttgaagcaatct |
5147790 |
T |
|
| Q |
292 |
tagtctctccatcttcttaaatgctttagcactaaaacattttgaactagttattggcaacttcaaagctaaaccctcaacagcttttgttccctacgaa |
391 |
Q |
| |
|
||||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||| ||| |||||||| ||||||||||||||||| |
|
|
| T |
5147791 |
cagtcttgtcatcttcttaaatgctttagtactaaaacattttgaactagatattggcaacttcaaaactagcgcctcaacaacttttgttccctacgaa |
5147890 |
T |
|
| Q |
392 |
atataattgaccaaaatgtaaaaca |
416 |
Q |
| |
|
||| || |||||||| ||||||| |
|
|
| T |
5147891 |
atacgatggaccaaaagttaaaaca |
5147915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 610 - 782
Target Start/End: Complemental strand, 5382454 - 5382282
Alignment:
| Q |
610 |
aggtgcttacagttttttcaaataaaacattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgat |
709 |
Q |
| |
|
||||||||||| ||| || |||||||||| ||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
5382454 |
aggtgcttacaatttgttgaaataaaacaccaaggacatcctcatgaaaccataacctgctacgctcctcaggatcctttggtgatttttcacgaatgat |
5382355 |
T |
|
| Q |
710 |
ttctcttcccatatcccgtaacaaatcatgcattccaagtgtattcttatcatcgatagttacaaggcttctc |
782 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
5382354 |
ttctcttcccatatcccttaacaaatcatgcattccaagtgtattcttatcatcgacagttacaaggcttctc |
5382282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 102 - 395
Target Start/End: Original strand, 5074418 - 5074711
Alignment:
| Q |
102 |
ttaatacctgggactctttccacacaaatatcattttactgttttctaactcaatggaaactaaatttctttgacaaaagtttgaaggtatgaatggtaa |
201 |
Q |
| |
|
|||||||||||| || ||||||||||| | | || || |||||| |||||||||||||||||||||||| |||| ||||| ||||||| ||| ||| ||| |
|
|
| T |
5074418 |
ttaatacctgggtctttttccacacaagtttgatattgctgtttactaactcaatggaaactaaatttccttgataaaagcttgaaggaatgcatgttaa |
5074517 |
T |
|
| Q |
202 |
aggaaaccctttccaacacagccatcttaattttcttgaaagatactcgaaatctccatcaagttgtactccagcaagttgaagcaatcttagtctctcc |
301 |
Q |
| |
|
|||||| || ||||| | |||||||| || ||||||||||||| || ||||| |||||||||||||| ||||||||||||||||||| ||| | ||| |
|
|
| T |
5074518 |
aggaaatccattccatgaaagccatctcaaatttcttgaaagatgttcaaaatccccatcaagttgtacaccagcaagttgaagcaatcgaagtttttcc |
5074617 |
T |
|
| Q |
302 |
atcttcttaaatgctttagcactaaaacattttgaactagttattggcaacttcaaagctaaaccctcaacagcttttgttccctacgaaatat |
395 |
Q |
| |
|
||||||||||||||||||| |||||||||||||| | | | |||||||||||||||| || ||||||||| |||||||||||| ||||||| |
|
|
| T |
5074618 |
atcttcttaaatgctttagtactaaaacattttgcattttctcttggcaacttcaaagccaatccctcaacaacttttgttccctgtgaaatat |
5074711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 140 - 392
Target Start/End: Complemental strand, 5176174 - 5175922
Alignment:
| Q |
140 |
ctgttttctaactcaatggaaactaaatttctttgacaaaagtttgaaggtatgaatggtaaaggaaaccctttccaacacagccatcttaattttcttg |
239 |
Q |
| |
|
|||||||||||||| |||||||||||||||| |||| ||||| ||||||| ||| ||| ||||||||| || |||||| | |||||||| | ||||||| |
|
|
| T |
5176174 |
ctgttttctaactcgatggaaactaaatttccttgataaaagcttgaaggaatgcatgataaaggaaatccattccaagaaagccatctcagatttcttg |
5176075 |
T |
|
| Q |
240 |
aaagatactcgaaatctccatcaagttgtactccagcaagttgaagcaatcttagtctctccatcttcttaaatgctttagcactaaaacattttgaact |
339 |
Q |
| |
|
|||||||||| ||||| ||||||||||| || ||||||||||||||||| || ||| ||| ||| |||| ||||||||||| |||| ||||||| | ||| |
|
|
| T |
5176074 |
aaagatactcaaaatccccatcaagttgcacaccagcaagttgaagcaacctgagtttcttcatgttctcaaatgctttagtactataacatttcgcact |
5175975 |
T |
|
| Q |
340 |
agttattggcaacttcaaagctaaaccctcaacagcttttgttccctacgaaa |
392 |
Q |
| |
|
| | ||||||||||||||| || ||||||||||||||||||||||| |||| |
|
|
| T |
5175974 |
atctcttggcaacttcaaagtcaatccctcaacagcttttgttccctaagaaa |
5175922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 140 - 392
Target Start/End: Complemental strand, 5278001 - 5277749
Alignment:
| Q |
140 |
ctgttttctaactcaatggaaactaaatttctttgacaaaagtttgaaggtatgaatggtaaaggaaaccctttccaacacagccatcttaattttcttg |
239 |
Q |
| |
|
|||||||||||||| |||||||||||||||| |||| ||||| ||||||| ||| ||| ||||||||| || |||||| | |||||||| | ||||||| |
|
|
| T |
5278001 |
ctgttttctaactcgatggaaactaaatttccttgataaaagcttgaaggaatgcatgataaaggaaatccattccaagaaagccatctcagatttcttg |
5277902 |
T |
|
| Q |
240 |
aaagatactcgaaatctccatcaagttgtactccagcaagttgaagcaatcttagtctctccatcttcttaaatgctttagcactaaaacattttgaact |
339 |
Q |
| |
|
|||||||||| ||||| ||||||||||| || ||||||||||||||||| || ||| ||| ||| |||| ||||||||||| |||| ||||||| | ||| |
|
|
| T |
5277901 |
aaagatactcaaaatccccatcaagttgcacaccagcaagttgaagcaaactgagtttcttcatgttctcaaatgctttagtactataacatttcgcact |
5277802 |
T |
|
| Q |
340 |
agttattggcaacttcaaagctaaaccctcaacagcttttgttccctacgaaa |
392 |
Q |
| |
|
| | ||||||||||||||| || ||||||||||||||||||||||| |||| |
|
|
| T |
5277801 |
atctcttggcaacttcaaagtcaatccctcaacagcttttgttccctaagaaa |
5277749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 93 - 387
Target Start/End: Complemental strand, 5432767 - 5432473
Alignment:
| Q |
93 |
aaatcaaaattaatacctgggactctttccacacaaatatcattttactgttttctaactcaatggaaactaaatttctttgacaaaagtttgaaggtat |
192 |
Q |
| |
|
|||||||| ||||||||||| ||||||||||| | | | | ||||||||||||||||| ||||||||||||||| |||| ||||||||| |||||| |
|
|
| T |
5432767 |
aaatcaaacctaatacctgggtctctttccacaaatctttgacattactgttttctaactcgatggaaactaaatttgcttgataaaagtttgtaggtat |
5432668 |
T |
|
| Q |
193 |
gaatggtaaaggaaaccctttccaacacagccatcttaattttcttgaaagatactcgaaatctccatcaagttgtactccagcaagttgaagcaatctt |
292 |
Q |
| |
|
| ||| ||| ||||| || |||||| | |||||||| | ||||||||||||| || |||| |||||||| || || |||||||||| ||||||||| |
|
|
| T |
5432667 |
gcatgataacggaaatccattccaagaaagccatctcagatttcttgaaagatgttcaaaattcccatcaagctgcacaccagcaagttcaagcaatctg |
5432568 |
T |
|
| Q |
293 |
agtctctccatcttcttaaatgctttagcactaaaacattttgaactagttattggcaacttcaaagctaaaccctcaacagcttttgttcccta |
387 |
Q |
| |
|
||| ||| ||||||||||||||| || |||| ||||||||| |||| | ||||||||||||||| || ||||||| ||||||||||||||| |
|
|
| T |
5432567 |
agtttcttcatcttcttaaatgcaacagtactataacattttgcactatctcttggcaacttcaaagtcaatccctcaatagcttttgttcccta |
5432473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 140 - 416
Target Start/End: Complemental strand, 5342943 - 5342667
Alignment:
| Q |
140 |
ctgttttctaactcaatggaaactaaatttctttgacaaaagtttgaaggtatgaatggtaaaggaaaccctttccaacacagccatcttaattttcttg |
239 |
Q |
| |
|
|||||||| ||||| |||||||||||||||| |||| ||||||| ||||||| || ||||||||| || |||||||| |||||||||| |||||| | |
|
|
| T |
5342943 |
ctgttttcaaactccatggaaactaaatttccttgatcaaagtttttaggtatgcatcttaaaggaaatccattccaacatagccatcttagttttctag |
5342844 |
T |
|
| Q |
240 |
aaagatactcgaaatctccatcaagttgtactccagcaagttgaagcaatcttagtctctccatcttcttaaatgctttagcactaaaacattttgaact |
339 |
Q |
| |
|
||||||| || |||||||||||||||||||| |||| ||||||||||||||||||| | | |||||| | ||||||||||| ||||||| |||| | |
|
|
| T |
5342843 |
aaagatagtcaaaatctccatcaagttgtacgccagaaagttgaagcaatcttagtttattcatcttttcaaatgctttagttctaaaacgatttgcatc |
5342744 |
T |
|
| Q |
340 |
agttattggcaacttcaaagctaaaccctcaacagcttttgttccctacgaaatataattgaccaaaatgtaaaaca |
416 |
Q |
| |
|
| | || ||||||||||||| | ||||||||||||| |||||||| || | ||||| ||||| || |||||||| |
|
|
| T |
5342743 |
accttttagcaacttcaaagccagtccctcaacagcttgtgttccctttgataaataatggaccacaaagtaaaaca |
5342667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 140 - 395
Target Start/End: Complemental strand, 5396369 - 5396114
Alignment:
| Q |
140 |
ctgttttctaactcaatggaaactaaatttctttgacaaaagtttgaaggtatgaatggtaaaggaaaccctttccaacacagccatcttaattttcttg |
239 |
Q |
| |
|
|||||| |||||||||||||||||||||| | ||| ||||| ||||||| ||| || ||||||||| | |||||| | |||||||| | ||||||| |
|
|
| T |
5396369 |
ctgtttactaactcaatggaaactaaattcccctgataaaagcttgaaggaatgcattttaaaggaaatgcattccaagaaagccatctcacatttcttg |
5396270 |
T |
|
| Q |
240 |
aaagatactcgaaatctccatcaagttgtactccagcaagttgaagcaatcttagtctctccatcttcttaaatgctttagcactaaaacattttgaact |
339 |
Q |
| |
|
||||||| || ||||| ||||||||||||| |||||||||||||||| ||| ||| | | ||||||||| |||||||| | |||||| |||||| | |
|
|
| T |
5396269 |
aaagatattcaaaatcaccatcaagttgtaaaccagcaagttgaagcagtctgagttttttcatcttcttgaatgctttggtactaaagcatttttcatc |
5396170 |
T |
|
| Q |
340 |
agttattggcaacttcaaagctaaaccctcaacagcttttgttccctacgaaatat |
395 |
Q |
| |
|
||| ||||||| |||||||||| ||||||||||||||||||||||| ||||||| |
|
|
| T |
5396169 |
tgttgttggcaatttcaaagctagtccctcaacagcttttgttccctatgaaatat |
5396114 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 93 - 387
Target Start/End: Original strand, 5355326 - 5355620
Alignment:
| Q |
93 |
aaatcaaaattaatacctgggactctttccacacaaatatcattttactgttttctaactcaatggaaactaaatttctttgacaaaagtttgaaggtat |
192 |
Q |
| |
|
|||| ||||||| |||||||| ||||||||||| || | | | || || || |||||||| |||||||||||||||| | || ||| ||||| ||||| |
|
|
| T |
5355326 |
aaataaaaattactacctgggcctctttccacataagtttgacattgctattctctaactctatggaaactaaatttcctagaaaaaggtttgttggtat |
5355425 |
T |
|
| Q |
193 |
gaatggtaaaggaaaccctttccaacacagccatcttaattttcttgaaagatactcgaaatctccatcaagttgtactccagcaagttgaagcaatctt |
292 |
Q |
| |
|
|| ||||||||| | |||||| ||||||| || | |||||||||||| | || |||| ||||||||||| ||||||||||||| |||||||| | |
|
|
| T |
5355426 |
atgtgttaaaggaaattcattccaagacagccacctcagatttcttgaaagacattcaaaatttccatcaagttttactccagcaagtagaagcaatttc |
5355525 |
T |
|
| Q |
293 |
agtctctccatcttcttaaatgctttagcactaaaacattttgaactagttattggcaacttcaaagctaaaccctcaacagcttttgttcccta |
387 |
Q |
| |
|
||||||| |||||||||||||||||||| |||||||||||||| | | | |||||||||||||||| || |||| | |||||| |||||||| |
|
|
| T |
5355526 |
agtctcttcatcttcttaaatgctttagtactaaaacattttgcatcaactcttggcaacttcaaagccaatccctttatagctttagttcccta |
5355620 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 615 - 775
Target Start/End: Complemental strand, 5094842 - 5094682
Alignment:
| Q |
615 |
cttacagttttttcaaataaaacattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctc |
714 |
Q |
| |
|
|||||||||| ||| |||| |||| ||||||||| ||||||||||| ||||||||||||||||| | | || ||||||||| | |||||||||||||| |
|
|
| T |
5094842 |
cttacagtttgttctgataatacatgaagcacatcatcatgaaaccacaacctgcaacgctcctcgagctcctctggtgatttctcacgaatgatttctc |
5094743 |
T |
|
| Q |
715 |
ttcccatatcccgtaacaaatcatgcattccaagtgtattcttatcatcgatagttacaag |
775 |
Q |
| |
|
|||||||||| || ||||||||||||||||||||| | ||||||||||| | ||||||||| |
|
|
| T |
5094742 |
ttcccatatctcgcaacaaatcatgcattccaagtttgttcttatcatcaacagttacaag |
5094682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 101 - 395
Target Start/End: Original strand, 5182583 - 5182877
Alignment:
| Q |
101 |
attaatacctgggactctttccacacaaatatcattttactgttttctaactcaatggaaactaaatttctttgacaaaagtttgaaggtatgaatggta |
200 |
Q |
| |
|
||||||||||||| |||||||||||||| | | | || |||||| ||||||||||||||||||||||| |||| |||| | ||||| ||| || | |
|
|
| T |
5182583 |
attaatacctggggctctttccacacaactttaacattgctgtttactaactcaatggaaactaaattttcttgataaaaactcgaaggaatgcatttca |
5182682 |
T |
|
| Q |
201 |
aaggaaaccctttccaacacagccatcttaattttcttgaaagatactcgaaatctccatcaagttgtactccagcaagttgaagcaatcttagtctctc |
300 |
Q |
| |
|
||||||| || |||||| | |||||| | | |||||||||||||| || || || || ||||||||||| | |||||||||||||| ||| ||| | | |
|
|
| T |
5182683 |
aaggaaatccattccaagaaagccatatcagatttcttgaaagatattcaaagtccccctcaagttgtacactagcaagttgaagcagtctaagtttttt |
5182782 |
T |
|
| Q |
301 |
catcttcttaaatgctttagcactaaaacattttgaactagttattggcaacttcaaagctaaaccctcaacagcttttgttccctacgaaatat |
395 |
Q |
| |
|
||||| ||| |||||||| | |||||| |||||| | | | | ||||||| ||||||||||| |||||||||||||||||||||| ||||||| |
|
|
| T |
5182783 |
catctccttgaatgctttggtactaaagcattttccatttgctgttggcaatttcaaagctaatccctcaacagcttttgttccctgtgaaatat |
5182877 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 146 - 360
Target Start/End: Complemental strand, 5349549 - 5349335
Alignment:
| Q |
146 |
tctaactcaatggaaactaaatttctttgacaaaagtttgaaggtatgaatggtaaaggaaaccctttccaacacagccatcttaattttcttgaaagat |
245 |
Q |
| |
|
|||||||| ||||||||||||||| | | ||||||||| |||||| ||||||| | | || |||||| | |||||||| | ||| ||||||||| |
|
|
| T |
5349549 |
tctaactcgatggaaactaaattttctctataaaagtttgcaggtatatgtggtaaacaacatccgttccaagaaagccatctcagattttttgaaagat |
5349450 |
T |
|
| Q |
246 |
actcgaaatctccatcaagttgtactccagcaagttgaagcaatcttagtctctccatcttcttaaatgctttagcactaaaacattttgaactagttat |
345 |
Q |
| |
|
| || |||||||||||||||| ||| |||||||||||||||||||| ||||||| ||||||||| |||||||||| ||||||||||||| | ||| | | |
|
|
| T |
5349449 |
attcaaaatctccatcaagttttaccccagcaagttgaagcaatctgagtctcttcatcttcttgaatgctttagtactaaaacatttttcattagctct |
5349350 |
T |
|
| Q |
346 |
tggcaacttcaaagc |
360 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
5349349 |
tggcaacttcaaagc |
5349335 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 636 - 780
Target Start/End: Original strand, 5104094 - 5104238
Alignment:
| Q |
636 |
acattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaacaaat |
735 |
Q |
| |
|
|||| ||||||||| ||||||||||| ||||||||||||||||| | | || ||||||||| | |||||||||||||||||||||||| || ||||||| |
|
|
| T |
5104094 |
acatgaagcacatcgtcatgaaaccacaacctgcaacgctcctcgagctcctctggtgatttctcacgaatgatttctcttcccatatctcgcaacaaat |
5104193 |
T |
|
| Q |
736 |
catgcattccaagtgtattcttatcatcgatagttacaaggcttc |
780 |
Q |
| |
|
|||||||||||||| | ||||||||||| | ||||| ||| |||| |
|
|
| T |
5104194 |
catgcattccaagtttgttcttatcatcaacagttataagacttc |
5104238 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 146 - 360
Target Start/End: Complemental strand, 5424925 - 5424711
Alignment:
| Q |
146 |
tctaactcaatggaaactaaat-ttctttgacaaaagtttgaaggtatgaatggtaaaggaaaccctttccaacacagccatcttaattttcttgaaaga |
244 |
Q |
| |
|
|||||||| ||||||||||||| |||| | | ||||||||| |||||| |||||||| | | || |||||| |||||||||| | ||||| |||||| |
|
|
| T |
5424925 |
tctaactcgatggaaactaaatgttctct-ataaaagtttgtaggtatatgtggtaaagaacatccattccaagacagccatctcagatttctcgaaaga |
5424827 |
T |
|
| Q |
245 |
tactcgaaatctccatcaagttgtactccagcaagttgaagcaatcttagtctctccatcttcttaaatgctttagcactaaaacattttgaactagtta |
344 |
Q |
| |
|
|| | |||||||||| ||||| ||| |||||||||||||||||||| |||||| ||||||||| |||||||||| ||||||||||||| | ||| | |
|
|
| T |
5424826 |
tatttaaaatctccattaagttttaccccagcaagttgaagcaatctgagtctcgtcatcttcttgaatgctttagtactaaaacatttttcattagctc |
5424727 |
T |
|
| Q |
345 |
ttggcaacttcaaagc |
360 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
5424726 |
ttggcaacttcaaagc |
5424711 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 146 - 360
Target Start/End: Original strand, 5067903 - 5068117
Alignment:
| Q |
146 |
tctaactcaatggaaactaaatttctttgacaaaagtttgaaggtatgaatggtaaaggaaaccctttccaacacagccatcttaattttcttgaaagat |
245 |
Q |
| |
|
|||||||| ||||||||||||||| | | |||||||| |||||| ||||||| | | || |||||| |||||||| | | ||||| ||||||| |
|
|
| T |
5067903 |
tctaactcgatggaaactaaattttctctataaaagttttcaggtatatgtggtaaacaacatccattccaagacagccatatcagatttctcgaaagat |
5068002 |
T |
|
| Q |
246 |
actcgaaatctccatcaagttgtactccagcaagttgaagcaatcttagtctctccatcttcttaaatgctttagcactaaaacattttgaactagttat |
345 |
Q |
| |
|
| || |||||||||||||| | ||| |||||||||||||||||||| ||||||| ||||||||| |||||||||| ||||||||||||| | ||| | | |
|
|
| T |
5068003 |
attcaaaatctccatcaaggtttaccccagcaagttgaagcaatctgagtctcttcatcttcttgaatgctttagtactaaaacatttttcattagatct |
5068102 |
T |
|
| Q |
346 |
tggcaacttcaaagc |
360 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
5068103 |
tggcaacttcaaagc |
5068117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 233 - 386
Target Start/End: Original strand, 5103743 - 5103896
Alignment:
| Q |
233 |
tttcttgaaagatactcgaaatctccatcaagttgtactccagcaagttgaagcaatcttagtctctccatcttcttaaatgctttagcactaaaacatt |
332 |
Q |
| |
|
||||| |||||||| || |||||||||||||||| |||||||| ||||||||||| ||| ||||||| ||||||||| |||||||||| ||||||||||| |
|
|
| T |
5103743 |
tttctcgaaagatattcaaaatctccatcaagttttactccagaaagttgaagcagtctaagtctcttcatcttcttgaatgctttagtactaaaacatt |
5103842 |
T |
|
| Q |
333 |
ttgaactagttattggcaacttcaaagctaaaccctcaacagcttttgttccct |
386 |
Q |
| |
|
|| | | | | |||||||||||||||| | |||| || |||||||||||||| |
|
|
| T |
5103843 |
tttcattggatcttggcaacttcaaagccagtcccttaatagcttttgttccct |
5103896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 631 - 780
Target Start/End: Complemental strand, 5369245 - 5369096
Alignment:
| Q |
631 |
ataaaacattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaa |
730 |
Q |
| |
|
|||| |||| ||||||||||||||||||||| ||||||||||||||||| | | | ||||||||| |||||||||||||||||||||||| || || |
|
|
| T |
5369245 |
ataatacatgaagcacatcctcatgaaaccacaacctgcaacgctcctcgagctcttctggtgatttcccacgaatgatttctcttcccatatctcgcaa |
5369146 |
T |
|
| Q |
731 |
caaatcatgcattccaagtgtattcttatcatcgatagttacaaggcttc |
780 |
Q |
| |
|
||||||||||||||||||| | ||||||||||| | ||| ||||| |||| |
|
|
| T |
5369145 |
caaatcatgcattccaagtttgttcttatcatcaacagtgacaagacttc |
5369096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 615 - 763
Target Start/End: Original strand, 5158702 - 5158850
Alignment:
| Q |
615 |
cttacagttttttcaaataaaacattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctc |
714 |
Q |
| |
|
|||||||||| ||| |||| |||| ||||||||| ||||||||||| ||||||||||||||||| | || ||||||||| | |||||||||||||| |
|
|
| T |
5158702 |
cttacagtttgttctgataatacatgaagcacatcgtcatgaaaccacaacctgcaacgctcctcgatctcctctggtgatttctcacgaatgatttctc |
5158801 |
T |
|
| Q |
715 |
ttcccatatcccgtaacaaatcatgcattccaagtgtattcttatcatc |
763 |
Q |
| |
|
|||||||||| || ||||||||||||||||||||| | |||||| |||| |
|
|
| T |
5158802 |
ttcccatatctcgcaacaaatcatgcattccaagtttgttcttaccatc |
5158850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 91 - 334
Target Start/End: Complemental strand, 5095396 - 5095153
Alignment:
| Q |
91 |
agaaatcaaaattaatacctgggactctttccacacaaatatcattttactgttttctaactcaatggaaactaaatttctttgacaaaagtttgaaggt |
190 |
Q |
| |
|
||||||||||| | ||||||||| ||||||||| | || | | | || || || |||||||| |||||||| || ||| || ||||||||| |||| |
|
|
| T |
5095396 |
agaaatcaaaacttatacctgggcctctttccataaaagtttgacattgctattctctaactcgatggaaaccaagcttcctttgtaaaagtttgtaggt |
5095297 |
T |
|
| Q |
191 |
atgaatggtaaaggaaaccctttccaacacagccatcttaattttcttgaaagatactcgaaatctccatcaagttgtactccagcaagttgaagcaatc |
290 |
Q |
| |
|
|| || ||||| ||| || |||||| |||||||||| | ||||| |||||||| || |||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
5095296 |
atatgtgttaaagaaaatccattccaagacagccatctcagatttctcgaaagatattcaaaatctccatcaagtttaaccccagcaagttgaagcaatc |
5095197 |
T |
|
| Q |
291 |
ttagtctctccatcttcttaaatgctttagcactaaaacatttt |
334 |
Q |
| |
|
| |||||| ||||||||| |||||||||| ||||||||||||| |
|
|
| T |
5095196 |
tgagtctcgtcatcttcttgaatgctttagtactaaaacatttt |
5095153 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 140 - 358
Target Start/End: Original strand, 5690852 - 5691070
Alignment:
| Q |
140 |
ctgttttctaactcaatggaaactaaatttctttgacaaaagtttgaaggtatgaatggtaaaggaaaccctttccaacacagccatcttaattttcttg |
239 |
Q |
| |
|
|||||||||||||||| |||||||||||||| |||| ||||| ||||||| ||| ||| ||||||||| || | |||| | | |||||| | ||| ||| |
|
|
| T |
5690852 |
ctgttttctaactcaagggaaactaaatttccttgataaaagcttgaagggatggatgttaaaggaaatccatcccaagaaaaccatctcagattttttg |
5690951 |
T |
|
| Q |
240 |
aaagatactcgaaatctccatcaagttgtactccagcaagttgaagcaatcttagtctctccatcttcttaaatgctttagcactaaaacattttgaact |
339 |
Q |
| |
|
|||| | || |||| |||||||||| ||||||||||||||||| |||||| ||| | |||||||||| |||||||| || | ||||||||| | | | |
|
|
| T |
5690952 |
aaagtttatcaaaattcccatcaagttctactccagcaagttgaaacaatctcagtttttccatcttctcaaatgcttcagtattaaaacattgtacatt |
5691051 |
T |
|
| Q |
340 |
agttattggcaacttcaaa |
358 |
Q |
| |
|
|| | |||||||||||||| |
|
|
| T |
5691052 |
agctcttggcaacttcaaa |
5691070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 631 - 763
Target Start/End: Complemental strand, 5424538 - 5424406
Alignment:
| Q |
631 |
ataaaacattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaa |
730 |
Q |
| |
|
|||| |||| ||||||||||||||||||||| ||||||||||||||||| | | | ||||||||| |||||||||||||||||||||||| || || |
|
|
| T |
5424538 |
ataatacatgaagcacatcctcatgaaaccacaacctgcaacgctcctcgagctcttctggtgatttcccacgaatgatttctcttcccatatctcgcaa |
5424439 |
T |
|
| Q |
731 |
caaatcatgcattccaagtgtattcttatcatc |
763 |
Q |
| |
|
||||||||||||||||||| | || |||||||| |
|
|
| T |
5424438 |
caaatcatgcattccaagtttgttattatcatc |
5424406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 143 - 386
Target Start/End: Original strand, 5132634 - 5132880
Alignment:
| Q |
143 |
ttttctaactcaatggaaactaaa-tttctttgacaaaagtttgaaggtatgaatggtaaaggaaaccctttccaacacagccatcttaattttcttgaa |
241 |
Q |
| |
|
||||||||||| |||||||||||| ||||| | | |||| | || |||||| || ||||||||| || |||||||||| |||||||| ||||||||| |
|
|
| T |
5132634 |
ttttctaactcgatggaaactaaactttctct-ataaaaatctgtaggtatatgtgttaaaggaaatccattccaacacaaccatcttagatttcttgaa |
5132732 |
T |
|
| Q |
242 |
agatactcgaaatctccatcaagttgtactccagcaagttgaagcaatcttagtctc-tc--catcttcttaaatgctttagcactaaaacattttgaac |
338 |
Q |
| |
|
|| || |||||||||||||||| ||| ||| |||||||||||||||| || ||| || ||||| |||||||||||||| ||||| |||||||| | |
|
|
| T |
5132733 |
aggatttcaaaatctccatcaagttttaccccatcaagttgaagcaatctgagcctcgtcgtcatctccttaaatgctttagtactaagacattttgcat |
5132832 |
T |
|
| Q |
339 |
tagttattggcaacttcaaagctaaaccctcaacagcttttgttccct |
386 |
Q |
| |
|
||| | |||||||||||||||| || |||| || | ||||||||||| |
|
|
| T |
5132833 |
tagctcttggcaacttcaaagccaaccccttaattgattttgttccct |
5132880 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 631 - 780
Target Start/End: Complemental strand, 5349162 - 5349011
Alignment:
| Q |
631 |
ataaaacattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaa |
730 |
Q |
| |
|
||||||||| |||||||||||| |||||||| ||||||||||||||||| | | | ||||||||| |||||||||||||||||||||||| || || |
|
|
| T |
5349162 |
ataaaacatgaagcacatcctcctgaaaccagaacctgcaacgctcctcgagctcttctggtgatttcccacgaatgatttctcttcccatatctcgcaa |
5349063 |
T |
|
| Q |
731 |
caaatc--atgcattccaagtgtattcttatcatcgatagttacaaggcttc |
780 |
Q |
| |
|
|||||| ||||||||||||| | ||||||||||| | ||| ||||| |||| |
|
|
| T |
5349062 |
caaatcatatgcattccaagtttgttcttatcatcaacagtgacaagacttc |
5349011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 645 - 748
Target Start/End: Complemental strand, 5432178 - 5432075
Alignment:
| Q |
645 |
acatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaacaaatcatgcattc |
744 |
Q |
| |
|
||||||||| ||| ||| ||||||| | |||||||||||| |||||||| || |||| |||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
5432178 |
acatcctcaggaagccacaacctgctatgctcctcaggatcctttggtggattattacaaatgatttctcttcccatatcccgcaacaaatcatgcattc |
5432079 |
T |
|
| Q |
745 |
caag |
748 |
Q |
| |
|
|||| |
|
|
| T |
5432078 |
caag |
5432075 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 212 - 386
Target Start/End: Complemental strand, 5369591 - 5369417
Alignment:
| Q |
212 |
ttccaacacagccatcttaattttcttgaaagatactcgaaatctccatcaagttgtactccagcaagttgaagcaatcttagtctctccatcttcttaa |
311 |
Q |
| |
|
|||||| |||||||||| | ||||| |||||||| || |||||||||||||||| ||| ||||||||||| |||||||| ||| | | ||||||||| | |
|
|
| T |
5369591 |
ttccaagacagccatctcagatttctggaaagatattcaaaatctccatcaagttttaccccagcaagttggagcaatctgagtttgttcatcttcttga |
5369492 |
T |
|
| Q |
312 |
atgctttagcactaaaacattttgaactagttattggcaacttcaaagctaaaccctcaacagcttttgttccct |
386 |
Q |
| |
|
||||||||| ||||||| |||| | ||| | ||||||||||||| || | |||| || |||||||||||||| |
|
|
| T |
5369491 |
atgctttagtgctaaaacgtttttcattagctcttggcaacttcaacgccagccccttaatagcttttgttccct |
5369417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 631 - 780
Target Start/End: Original strand, 5355833 - 5355982
Alignment:
| Q |
631 |
ataaaacattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaa |
730 |
Q |
| |
|
||||||||| ||||||||| ||||||| ||| || |||| ||| ||||||| | || |||||||| | ||||| || ||||||||||||||| |||| |
|
|
| T |
5355833 |
ataaaacatcaagcacatcatcatgaagccacaatctgctacgtgcctcagggtcctccggtgatttctcacgaacgacttctcttcccatatctcgtag |
5355932 |
T |
|
| Q |
731 |
caaatcatgcattccaagtgtattcttatcatcgatagttacaaggcttc |
780 |
Q |
| |
|
|||||||||||||| ||| ||||||||||||| | |||||||||||||| |
|
|
| T |
5355933 |
caaatcatgcattctaagcctattcttatcatcaacagttacaaggcttc |
5355982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 235 - 359
Target Start/End: Original strand, 5260946 - 5261070
Alignment:
| Q |
235 |
tcttgaaagatactcgaaatctccatcaagttgtactccagcaagttgaagcaatcttagtctctccatcttcttaaatgctttagcactaaaacatttt |
334 |
Q |
| |
|
|||||||| ||| || ||||| |||||||||| |||| ||||||||||||||||||| || |||| |||||| | ||||||||||| ||||||||||||| |
|
|
| T |
5260946 |
tcttgaaacatattcaaaatccccatcaagttttacttcagcaagttgaagcaatctgagactcttcatcttttcaaatgctttagtactaaaacatttt |
5261045 |
T |
|
| Q |
335 |
gaactagttattggcaacttcaaag |
359 |
Q |
| |
|
| | ||| | | ||||||||||||| |
|
|
| T |
5261046 |
gcattagctttaggcaacttcaaag |
5261070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 251 - 407
Target Start/End: Complemental strand, 5446273 - 5446117
Alignment:
| Q |
251 |
aaatctccatcaagttgtactccagcaagttgaagcaatcttagtctctccatcttcttaaatgctttagcactaaaacattttgaactagttattggca |
350 |
Q |
| |
|
|||||||||||||||| ||| ||||||||||||| ||||| ||||||| |||||| | ||||||||||| |||||||||||||| | ||||| | |||| |
|
|
| T |
5446273 |
aaatctccatcaagttttacctcagcaagttgaagaaatctgagtctcttcatcttttcaaatgctttagtactaaaacattttgcattagttgtaggca |
5446174 |
T |
|
| Q |
351 |
acttcaaagctaaaccctcaacagcttttgttccctacgaaatataattgaccaaaa |
407 |
Q |
| |
|
| |||||||| | ||| || | ||||| |||||| |||||||||| |||||||| |
|
|
| T |
5446173 |
atttcaaagccagtcccaaaatacctttttttccctgtgaaatataatggaccaaaa |
5446117 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 645 - 748
Target Start/End: Complemental strand, 5175637 - 5175534
Alignment:
| Q |
645 |
acatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaacaaatcatgcattc |
744 |
Q |
| |
|
||||||||| ||||||| ||||||| |||||||||||| | | || ||| ||| |||| |||||||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
5175637 |
acatcctcaagaaaccacaacctgctacgctcctcaggctccattcgtggtttattacaaatgatttctcttcccatatcccgcaacaaattatgcattc |
5175538 |
T |
|
| Q |
745 |
caag |
748 |
Q |
| |
|
|||| |
|
|
| T |
5175537 |
caag |
5175534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 645 - 748
Target Start/End: Complemental strand, 5277464 - 5277361
Alignment:
| Q |
645 |
acatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaacaaatcatgcattc |
744 |
Q |
| |
|
||||||||| ||||||| ||||||| |||||||||||| | | || ||| ||| |||| |||||||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
5277464 |
acatcctcaagaaaccacaacctgctacgctcctcaggctccattcgtggtttattacaaatgatttctcttcccatatcccgcaacaaattatgcattc |
5277365 |
T |
|
| Q |
745 |
caag |
748 |
Q |
| |
|
|||| |
|
|
| T |
5277364 |
caag |
5277361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 93 - 386
Target Start/End: Original strand, 5158200 - 5158493
Alignment:
| Q |
93 |
aaatcaaaattaatacctgggactctttccacacaaatatcattttactgttttctaactcaatggaaactaaatttctttgacaaaagtttgaaggtat |
192 |
Q |
| |
|
||||||||| | ||||||||| |||||||| | || | | || || || || |||||||| ||||||||||||||| | | ||||||||| |||||| |
|
|
| T |
5158200 |
aaatcaaaacttatacctgggcttctttccataaaagtttgatattgctattctctaactcgatggaaactaaattttctatataaaagtttgtaggtat |
5158299 |
T |
|
| Q |
193 |
gaatggtaaaggaaaccctttccaacacagccatcttaattttcttgaaagatactcgaaatctccatcaagttgtactccagcaagttgaagcaatctt |
292 |
Q |
| |
|
|| | ||| ||| | |||||| |||||||||| | |||| |||| ||| | ||||||||| |||||| || |||||||||||||||||||| |
|
|
| T |
5158300 |
atgtgttgaagaaaatctattccaagacagccatctcagacttctcgaaatatatttaaaatctccaacaagtttgaccccagcaagttgaagcaatcta |
5158399 |
T |
|
| Q |
293 |
agtctctccatcttcttaaatgctttagcactaaaacattttgaactagttattggcaacttcaaagctaaaccctcaacagcttttgttccct |
386 |
Q |
| |
|
||||||| ||||||||| |||||||||| ||| ||||||||| | ||| | || ||||||||||||| | |||| || || ||||||||||| |
|
|
| T |
5158400 |
agtctcttcatcttcttgaatgctttagtactgaaacatttttcattagctctttgcaacttcaaagccagccccttaatagtttttgttccct |
5158493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #33
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 692 - 780
Target Start/End: Original strand, 5075009 - 5075097
Alignment:
| Q |
692 |
tgattttttacgaatgatttctcttcccatatcccgtaacaaatcatgcattccaagtgtattcttatcatcgatagttacaaggcttc |
780 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| || | |||||||||||||||||| | ||| ||||||||| |||||||||||||| |
|
|
| T |
5075009 |
tgatttttcacgaatgatttctcttcccatatcacgcagcaaatcatgcattccaagcttgttcctatcatcgacagttacaaggcttc |
5075097 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #34
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 235 - 359
Target Start/End: Original strand, 5284944 - 5285068
Alignment:
| Q |
235 |
tcttgaaagatactcgaaatctccatcaagttgtactccagcaagttgaagcaatcttagtctctccatcttcttaaatgctttagcactaaaacatttt |
334 |
Q |
| |
|
|||||||| ||| || ||||| |||||||||| |||| | ||||||||||||||||| || |||| |||||| | ||||||||||| ||||||||||||| |
|
|
| T |
5284944 |
tcttgaaacatattcaaaatccccatcaagttttacttctgcaagttgaagcaatctgagactcttcatcttttcaaatgctttagtactaaaacatttt |
5285043 |
T |
|
| Q |
335 |
gaactagttattggcaacttcaaag |
359 |
Q |
| |
|
| | ||| | | ||||||||||||| |
|
|
| T |
5285044 |
gcattagctttaggcaacttcaaag |
5285068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #35
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 615 - 749
Target Start/End: Original strand, 5068275 - 5068409
Alignment:
| Q |
615 |
cttacagttttttcaaataaaacattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctc |
714 |
Q |
| |
|
|||||||||| ||| |||| || | |||| ||||||| |||||||| ||||||||||||||||| | | | ||||||||| ||||| |||||||| |
|
|
| T |
5068275 |
cttacagtttgttctgataatacttgaagcgcatcctcctgaaaccacaacctgcaacgctcctcgagctcttctggtgatttcccacgaacgatttctc |
5068374 |
T |
|
| Q |
715 |
ttcccatatcccgtaacaaatcatgcattccaagt |
749 |
Q |
| |
|
|||||||||| || ||||||||||||||||||||| |
|
|
| T |
5068375 |
ttcccatatctcgcaacaaatcatgcattccaagt |
5068409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 615 - 780
Target Start/End: Complemental strand, 5395844 - 5395679
Alignment:
| Q |
615 |
cttacagttttttcaaataaaacattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctc |
714 |
Q |
| |
|
|||||||||| ||| |||| |||| ||||| || | || |||||| ||||||| ||||||||| || | |||||||| || | ||||| |||||||| |
|
|
| T |
5395844 |
cttacagtttgttctgataatacatccagcacgtcattattaaaccacaacctgctacgctcctcgggctcttttggtgacttctcacgaacgatttctc |
5395745 |
T |
|
| Q |
715 |
ttcccatatcccgtaacaaatcatgcattccaagtgtattcttatcatcgatagttacaaggcttc |
780 |
Q |
| |
|
|||||||||| | || ||||||||||||| ||||| | ||| ||||||| | |||||||||||||| |
|
|
| T |
5395744 |
ttcccatatctcttagcaaatcatgcattgcaagtctgttcctatcatcaacagttacaaggcttc |
5395679 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #37
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 636 - 782
Target Start/End: Original strand, 5133127 - 5133273
Alignment:
| Q |
636 |
acattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaacaaat |
735 |
Q |
| |
|
|||| |||||||||||| |||||||| | ||||||||||||||| || ||||||| || |||||| ||||||||||||||||| | ||||||| |
|
|
| T |
5133127 |
acatcaagcacatcctcgtgaaaccacagtctgcaacgctcctcaaacacctccggtgattcttcacgaataatttctcttcccatatctctcaacaaat |
5133226 |
T |
|
| Q |
736 |
catgcattccaagtgtattcttatcatcgatagttacaaggcttctc |
782 |
Q |
| |
|
||||||||||||| | | |||| |||| | |||||||||||||||| |
|
|
| T |
5133227 |
catgcattccaagcctgtccttagcatcaacagttacaaggcttctc |
5133273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #38
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 656 - 782
Target Start/End: Original strand, 5183194 - 5183320
Alignment:
| Q |
656 |
aaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaacaaatcatgcattccaagtgtattc |
755 |
Q |
| |
|
|||||| ||||||| |||||||||||| | |||||||| || | ||||| |||||||||||||||||| | || ||||||||||||| ||| | ||| |
|
|
| T |
5183194 |
aaaccacaacctgctacgctcctcaggctcttttggtgacttctcacgaacgatttctcttcccatatctcttagcaaatcatgcatttgcagtttgttc |
5183293 |
T |
|
| Q |
756 |
ttatcatcgatagttacaaggcttctc |
782 |
Q |
| |
|
||||||| | |||||||||||||||| |
|
|
| T |
5183294 |
ctatcatcaacagttacaaggcttctc |
5183320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #39
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 631 - 749
Target Start/End: Complemental strand, 5342479 - 5342361
Alignment:
| Q |
631 |
ataaaacattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaa |
730 |
Q |
| |
|
|||| |||| |||||||||||| | ||| || ||||||| ||||||| || | | |||||||||||| | ||||| |||||||||||||||||| || | |
|
|
| T |
5342479 |
ataatacatcaagcacatcctccttaaagcacaacctgctacgctccccaagctcctttggtgatttctcacgaacgatttctcttcccatatctcgcag |
5342380 |
T |
|
| Q |
731 |
caaatcatgcattccaagt |
749 |
Q |
| |
|
|||||| |||||||||||| |
|
|
| T |
5342379 |
caaatcgtgcattccaagt |
5342361 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 701 - 780
Target Start/End: Original strand, 5691398 - 5691477
Alignment:
| Q |
701 |
acgaatgatttctcttcccatatcccgtaacaaatcatgcattccaagtgtattcttatcatcgatagttacaaggcttc |
780 |
Q |
| |
|
||||| |||||||||||||||||| || |||||||||||||||| ||| | ||| ||||||| | ||| |||||||||| |
|
|
| T |
5691398 |
acgaacgatttctcttcccatatctcgcaacaaatcatgcattctaagcctgttcctatcatcaacagtcacaaggcttc |
5691477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 708 - 782
Target Start/End: Original strand, 5261440 - 5261514
Alignment:
| Q |
708 |
atttctcttcccatatcccgtaacaaatcatgcattccaagtgtattcttatcatcgatagttacaaggcttctc |
782 |
Q |
| |
|
||||||||||||||||| || |||||| ||||||||||||| | ||||||||||| | | | |||||||||||| |
|
|
| T |
5261440 |
atttctcttcccatatctcgcaacaaaccatgcattccaagcatgttcttatcatcaacactcacaaggcttctc |
5261514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 705 - 780
Target Start/End: Original strand, 5148250 - 5148325
Alignment:
| Q |
705 |
atgatttctcttcccatatcccgtaacaaatcatgcattccaagtgtattcttatcatcgatagttacaaggcttc |
780 |
Q |
| |
|
|||||||||||| |||| || || |||||||||||||||||||| |||| ||||||| | ||| |||||||||| |
|
|
| T |
5148250 |
atgatttctcttgccatgtctcgcaacaaatcatgcattccaagccgattcatatcatcaacagtcacaaggcttc |
5148325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 131; Significance: 1e-67; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 100 - 398
Target Start/End: Original strand, 36214533 - 36214831
Alignment:
| Q |
100 |
aattaatacctgggactctttccacacaaatatcattttactgttttctaactcaatggaaactaaatttctttgacaaaagtttgaaggtatgaatggt |
199 |
Q |
| |
|
|||||||||||||| ||||| ||||||| | | | || |||||||||||||||||||||||||||||| |||| ||||| ||||||| ||| ||| | |
|
|
| T |
36214533 |
aattaatacctggggctcttcccacacatgtttgacattgctgttttctaactcaatggaaactaaattttcttgataaaagcttgaaggaatgcatgtt |
36214632 |
T |
|
| Q |
200 |
aaaggaaaccctttccaacacagccatcttaattttcttgaaagatactcgaaatctccatcaagttgtactccagcaagttgaagcaatcttagtctct |
299 |
Q |
| |
|
|||||||| || |||||| | |||||||| || ||| ||||||||||||| || || |||||||||||||| |||||||||||||||||||| ||||| | |
|
|
| T |
36214633 |
aaaggaaaaccattccaagaaagccatctcaaattttttgaaagatactcaaagtccccatcaagttgtacaccagcaagttgaagcaatctgagtcttt |
36214732 |
T |
|
| Q |
300 |
ccatcttcttaaatgctttagcactaaaacattttgaactagttattggcaacttcaaagctaaaccctcaacagcttttgttccctacgaaatataat |
398 |
Q |
| |
|
|||||||||||||||||||| |||||| | |||| | | ||| ||||||| |||||||| |||||||||||||||||||||||||| ||||||||| |
|
|
| T |
36214733 |
tcatcttcttaaatgctttagtactaaagcgttttccatttgttcttggcaatttcaaagccaaaccctcaacagcttttgttccctattaaatataat |
36214831 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 615 - 780
Target Start/End: Original strand, 36215093 - 36215258
Alignment:
| Q |
615 |
cttacagttttttcaaataaaacattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctc |
714 |
Q |
| |
|
|||||||||| ||| |||| |||| | ||| |||| || |||||| ||||||| |||||||||| | | |||||||||||| | ||||||||| |||| |
|
|
| T |
36215093 |
cttacagtttgttctgataatacatcagccacgtccttattaaaccacaacctgctacgctcctcaagctcctttggtgatttctcacgaatgatctctc |
36215192 |
T |
|
| Q |
715 |
ttcccatatcccgtaacaaatcatgcattccaagtgtattcttatcatcgatagttacaaggcttc |
780 |
Q |
| |
|
|||||||||| || | |||||||||||||||||| | ||| ||||||| | |||||||||||||| |
|
|
| T |
36215193 |
ttcccatatctcgcagcaaatcatgcattccaagcctgttcctatcatcaacagttacaaggcttc |
36215258 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 100; Significance: 5e-49; HSPs: 17)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 140 - 407
Target Start/End: Complemental strand, 4334851 - 4334584
Alignment:
| Q |
140 |
ctgttttctaactcaatggaaactaaatttctttgacaaaagtttgaaggtatgaatggtaaaggaaaccctttccaacacagccatcttaattttcttg |
239 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||| || |||||||||||| ||| ||||||||| || ||||| ||||||||| || ||||| | |
|
|
| T |
4334851 |
ctgttttctaactcaatggaaactatatttctttgacggaactttgaaggtatgcatgttaaaggaaatccattccagtgcagccatctcaactttctgg |
4334752 |
T |
|
| Q |
240 |
aaagatactcgaaatctccatcaagttgtactccagcaagttgaagcaatcttagtctctccatcttcttaaatgctttagcactaaaacattttgaact |
339 |
Q |
| |
|
||||||| | |||||||||||||||||| | |||| ||||||||||||||| ||| ||| |||||||||||||||||| | |||||||| || || ||| |
|
|
| T |
4334751 |
aaagatatttaaaatctccatcaagttgtgcgccagaaagttgaagcaatctgagtttcttcatcttcttaaatgctttggtactaaaacgttgtgcact |
4334652 |
T |
|
| Q |
340 |
agttattggcaacttcaaagctaaaccctcaacagcttttgttccctacgaaatataattgaccaaaa |
407 |
Q |
| |
|
| ||||| |||||||| || |||||||||| ||||||||||| ||||||||| |||||||| |
|
|
| T |
4334651 |
acgacctggcagcttcaaagtcaatccctcaacagtttttgttccctgtgaaatataaaggaccaaaa |
4334584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 96 - 406
Target Start/End: Complemental strand, 4359809 - 4359499
Alignment:
| Q |
96 |
tcaaaattaatacctgggactctttccacacaaatatcattttactgttttctaactcaatggaaactaaatttctttgacaaaagtttgaaggtatgaa |
195 |
Q |
| |
|
|||||||||||||||| |||||||||||||| | | || || |||||||||||| ||||||||||||||||||||||| | |||||||| |||||| | |
|
|
| T |
4359809 |
tcaaaattaatacctgcatctctttccacacaagtctgatattgctgttttctaacacaatggaaactaaatttctttgatagaagtttgacggtatgca |
4359710 |
T |
|
| Q |
196 |
tggtaaaggaaaccctttccaacacagccatcttaattttcttgaaagatactcgaaatctccatcaagttgtactccagcaagttgaagcaatcttagt |
295 |
Q |
| |
|
|| ||||||||| || ||||| ||||||||| |||||||||||||||| | |||||||||||||||||||| || | |||||| |||||||| ||| |
|
|
| T |
4359709 |
tgttaaaggaaatccattccactgcagccatctcaattttcttgaaagatgtttaaaatctccatcaagttgtacaccggaaagttgcagcaatctgagt |
4359610 |
T |
|
| Q |
296 |
ctctccatcttcttaaatgctttagcactaaaacattttgaactagttattggcaacttcaaagctaaaccctcaacagcttttgttccctacgaaatat |
395 |
Q |
| |
|
||| ||| |||| ||||| ||| | ||||||| || || |||| ||||| ||||||| | |||||||||||||| ||||||| ||||||| |
|
|
| T |
4359609 |
ttcttcatgttctcaaatgttttggtgctaaaacgttgtgcactacgacctggcagcttcaaactcagcccctcaacagctttagttccctgtgaaatat |
4359510 |
T |
|
| Q |
396 |
aattgaccaaa |
406 |
Q |
| |
|
|| |||||||| |
|
|
| T |
4359509 |
aaatgaccaaa |
4359499 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 140 - 397
Target Start/End: Original strand, 4321731 - 4321988
Alignment:
| Q |
140 |
ctgttttctaactcaatggaaactaaatttctttgacaaaagtttgaaggtatgaatggtaaaggaaaccctttccaacacagccatcttaattttcttg |
239 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||| | ||||||||||||||| || ||||||||| || ||||| ||||||| |||| ||||||| |
|
|
| T |
4321731 |
ctgttttctaactcaatggaaactatatttctttgatagaagtttgaaggtatgcatcttaaaggaaatccattccagtgcagccattttaaatttcttg |
4321830 |
T |
|
| Q |
240 |
aaagatactcgaaatctccatcaagttgtactccagcaagttgaagcaatcttagtctctccatcttcttaaatgctttagcactaaaacattttgaact |
339 |
Q |
| |
|
||| ||| | |||||||||||||||||||| |||| |||||| |||||||| ||| ||| ||| |||| ||||| ||||| |||||| | || || ||| |
|
|
| T |
4321831 |
aaatatatttaaaatctccatcaagttgtacaccagaaagttgcagcaatctgagtttcttcatgttctcaaatgttttagtactaaatcgttgtgcact |
4321930 |
T |
|
| Q |
340 |
agttattggcaacttcaaagctaaaccctcaacagcttttgttccctacgaaatataa |
397 |
Q |
| |
|
| ||||| |||||||| | ||||||||||||||||||||||| ||||||||| |
|
|
| T |
4321931 |
atgacatggcatcttcaaagtcagtccctcaacagcttttgttccctatgaaatataa |
4321988 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 78 - 387
Target Start/End: Original strand, 4125075 - 4125384
Alignment:
| Q |
78 |
aaatgcaaacaacagaaatcaaaattaatacctgggactctttccacacaaatatcattttactgttttctaactcaatggaaactaaatttctttgaca |
177 |
Q |
| |
|
|||| |||| |||| || || ||| ||||||||| |||||||||||||| | | | || || |||||||||||||||||||| | |||||||||| | |
|
|
| T |
4125075 |
aaatacaaaaaacaaaactccaaagtaatacctgcatctctttccacacaagtttgacattgctattttctaactcaatggaaacaatatttctttgata |
4125174 |
T |
|
| Q |
178 |
aaagtttgaaggtatgaatggtaaaggaaaccctttccaacacagccatcttaattttcttgaaagatactcgaaatctccatcaagttgtactccagca |
277 |
Q |
| |
|
||||||||||||||| ||| ||||||||| || ||||| |||||||| |||| | |||||||||| | |||||||||||||||||| | |||| | |
|
|
| T |
4125175 |
gaagtttgaaggtatgcatgttaaaggaaatccattccagtgtagccatctcaattgttttgaaagatatttaaaatctccatcaagttgtgcaccagaa |
4125274 |
T |
|
| Q |
278 |
agttgaagcaatcttagtctctccatcttcttaaatgctttagcactaaaacattttgaactagttattggcaacttcaaagctaaaccctcaacagctt |
377 |
Q |
| |
|
|||||||||||||| ||| ||| ||||||||||||||||| | ||||||| || || |||| | ||||| |||||||| | ||||||||||||| |
|
|
| T |
4125275 |
agttgaagcaatctgagtttcttcatcttcttaaatgcttcggtgctaaaacgttgtgcactacgtcctggcagcttcaaagtcagtccctcaacagctt |
4125374 |
T |
|
| Q |
378 |
ttgttcccta |
387 |
Q |
| |
|
|||||||||| |
|
|
| T |
4125375 |
ttgttcccta |
4125384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 99 - 406
Target Start/End: Complemental strand, 4344350 - 4344043
Alignment:
| Q |
99 |
aaattaatacctgggactctttccacacaaatatcattttactgttttctaactcaatggaaactaaatttctttgacaaaagtttgaaggtatgaatgg |
198 |
Q |
| |
|
||||||||||||| |||||||||||||| | | | | ||||||||||||||||||||||||| |||||||||| | ||||||||||||||| ||| |
|
|
| T |
4344350 |
aaattaatacctgcatctctttccacacaagtttgacactgctgttttctaactcaatggaaactatatttctttgatagaagtttgaaggtatgcatgc |
4344251 |
T |
|
| Q |
199 |
taaaggaaaccctttccaacacagccatcttaattttcttgaaagatactcgaaatctccatcaagttgtactccagcaagttgaagcaatcttagtctc |
298 |
Q |
| |
|
||| ||||| || ||||| |||||||| || |||||||||||||| | |||||||||||||||||||| |||| |||||| |||||||| ||| || |
|
|
| T |
4344250 |
taacggaaatccattccagtgtagccatctcaaatttcttgaaagatatttaaaatctccatcaagttgtacaccagaaagttgcagcaatctaagtttc |
4344151 |
T |
|
| Q |
299 |
tccatcttcttaaatgctttagcactaaaacattttgaactagttattggcaacttcaaagctaaaccctcaacagcttttgttccctacgaaatataat |
398 |
Q |
| |
|
| ||| |||| ||||||||| | |||||||| || || |||| ||||| ||| |||| | || ||||||||||||||||||| ||||||||| |
|
|
| T |
4344150 |
ttcatgttctcaaatgctttggtactaaaacgttgtgtactacgacctggcatcttaaaagtcagtccttcaacagcttttgttccctgtgaaatataaa |
4344051 |
T |
|
| Q |
399 |
tgaccaaa |
406 |
Q |
| |
|
||||||| |
|
|
| T |
4344050 |
agaccaaa |
4344043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 141 - 335
Target Start/End: Original strand, 4134524 - 4134718
Alignment:
| Q |
141 |
tgttttctaactcaatggaaactaaatttctttgacaaaagtttgaaggtatgaatggtaaaggaaaccctttccaacacagccatcttaattttcttga |
240 |
Q |
| |
|
||||||||| || ||||||||||||||||||||| ||||||||| || || |||| ||||||||| | ||||||||||||||||| || |||||||| |
|
|
| T |
4134524 |
tgttttctagctgaatggaaactaaatttctttggtaaaagtttgtgggcatcaatgttaaaggaaattcattccaacacagccatctcaaatttcttga |
4134623 |
T |
|
| Q |
241 |
aagatactcgaaatctccatcaagttgtactccagcaagttgaagcaatcttagtctctccatcttcttaaatgctttagcactaaaacattttg |
335 |
Q |
| |
|
|||||| | |||||||||||||||||||| |||| | ||||||||||||| ||| ||| ||| |||| |||||| || | |||||||||||||| |
|
|
| T |
4134624 |
aagatatttaaaatctccatcaagttgtacaccagaaggttgaagcaatctcagtttcttcatgttctcaaatgcattggtactaaaacattttg |
4134718 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 99 - 329
Target Start/End: Complemental strand, 4352629 - 4352399
Alignment:
| Q |
99 |
aaattaatacctgggactctttccacacaaatatcattttactgttttctaactcaatggaaactaaatttctttgacaaaagtttgaaggtatgaatgg |
198 |
Q |
| |
|
||||||||||||| ||||||||| |||| | | | || |||||||||||| ||| ||||||||||||||||||| | |||||||||| ||| ||| |
|
|
| T |
4352629 |
aaattaatacctgcatctctttccaaacaagtttgacattgctgttttctaacacaacggaaactaaatttctttgatagaagtttgaagctatacatgt |
4352530 |
T |
|
| Q |
199 |
taaaggaaaccctttccaacacagccatcttaattttcttgaaagatactcgaaatctccatcaagttgtactccagcaagttgaagcaatcttagtctc |
298 |
Q |
| |
|
||||||||| || ||||| ||||||| | || |||||||||||||| | |||||||||||||||||||| |||| |||||| |||||||| ||| || |
|
|
| T |
4352529 |
taaaggaaatccattccagtgcagccatttcaaatttcttgaaagatatttaaaatctccatcaagttgtacaccagaaagttgcagcaatctgagtttc |
4352430 |
T |
|
| Q |
299 |
tccatcttcttaaatgctttagcactaaaac |
329 |
Q |
| |
|
| ||| |||| ||||||||| | |||||||| |
|
|
| T |
4352429 |
ttcatgttctcaaatgctttggtactaaaac |
4352399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 636 - 780
Target Start/End: Complemental strand, 4334332 - 4334188
Alignment:
| Q |
636 |
acattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaacaaat |
735 |
Q |
| |
|
|||| ||||||||||||||||||||| ||||| | ||| |||||||| | | |||||||||| | |||||||||||||||||||||||| || | ||||| |
|
|
| T |
4334332 |
acatcaagcacatcctcatgaaaccacaacctactacgttcctcaggctccattggtgatttctcacgaatgatttctcttcccatatctcgaagcaaat |
4334233 |
T |
|
| Q |
736 |
catgcattccaagtgtattcttatcatcgatagttacaaggcttc |
780 |
Q |
| |
|
||||||| ||||| | |||||| |||||| ||||||||||||| |
|
|
| T |
4334232 |
catgcatgccaagcttgttcttaccatcgaccgttacaaggcttc |
4334188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 645 - 780
Target Start/End: Original strand, 4135013 - 4135148
Alignment:
| Q |
645 |
acatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaacaaatcatgcattc |
744 |
Q |
| |
|
||||||||||||||||||||||| | ||||| ||| | | |||||||||||| | || ||||| |||||||||||||| |||| |||||||||||||| |
|
|
| T |
4135013 |
acatcctcatgaaaccataacctactacgcttctcgagtttctttggtgatttctgtcggatgatctctcttcccatatctcgtagcaaatcatgcattc |
4135112 |
T |
|
| Q |
745 |
caagtgtattcttatcatcgatagttacaaggcttc |
780 |
Q |
| |
|
|||| | || |||||||| |||||||||||||||| |
|
|
| T |
4135113 |
caagcttgtttttatcatcaatagttacaaggcttc |
4135148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 636 - 782
Target Start/End: Original strand, 4322324 - 4322470
Alignment:
| Q |
636 |
acattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaacaaat |
735 |
Q |
| |
|
|||| ||||||||| ||||||||||| ||||| | ||| |||||||| | | |||||||||| | |||||||||||| ||||||||||| || | ||||| |
|
|
| T |
4322324 |
acatcaagcacatcatcatgaaaccacaacctactacgttcctcaggctccattggtgatttctcacgaatgatttcccttcccatatctcgcagcaaat |
4322423 |
T |
|
| Q |
736 |
catgcattccaagtgtattcttatcatcgatagttacaaggcttctc |
782 |
Q |
| |
|
||||||| ||||| | ||||||||||| | ||||||||||||||| |
|
|
| T |
4322424 |
catgcatgccaagcttgttcttatcatcaaccgttacaaggcttctc |
4322470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 644 - 782
Target Start/End: Complemental strand, 4359182 - 4359044
Alignment:
| Q |
644 |
cacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaacaaatcatgcatt |
743 |
Q |
| |
|
|||||||||||||||||| | ||| | | | |||||||| | |||||||||||| | |||||||||||||||||||||||| || | |||||||||||| |
|
|
| T |
4359182 |
cacatcctcatgaaaccacagcctactatgttcctcaggctcctttggtgatttctcacgaatgatttctcttcccatatctcggagcaaatcatgcatg |
4359083 |
T |
|
| Q |
744 |
ccaagtgtattcttatcatcgatagttacaaggcttctc |
782 |
Q |
| |
|
||||| | ||||||||||| | ||||||||||||||| |
|
|
| T |
4359082 |
ccaagcttgttcttatcatcaaccgttacaaggcttctc |
4359044 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 644 - 780
Target Start/End: Original strand, 4125670 - 4125806
Alignment:
| Q |
644 |
cacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaacaaatcatgcatt |
743 |
Q |
| |
|
||||||||||||| |||| ||||| | ||| |||||||| | | |||||||||| | |||||||||||||||||||||||| || | |||||||||||| |
|
|
| T |
4125670 |
cacatcctcatgataccacaacctactacgttcctcaggctccattggtgatttctcacgaatgatttctcttcccatatctcgcagcaaatcatgcatg |
4125769 |
T |
|
| Q |
744 |
ccaagtgtattcttatcatcgatagttacaaggcttc |
780 |
Q |
| |
|
||||| | ||||||||||| | ||||||||||||| |
|
|
| T |
4125770 |
ccaagcttgttcttatcatcaactgttacaaggcttc |
4125806 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 636 - 782
Target Start/End: Complemental strand, 4352009 - 4351863
Alignment:
| Q |
636 |
acattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaacaaat |
735 |
Q |
| |
|
|||| |||||||||| | |||||||| ||||| | ||| |||||||| | |||||||||||| | |||||||||||||||||||||||| || | ||||| |
|
|
| T |
4352009 |
acatcaagcacatccccgtgaaaccacaacctactacgttcctcaggctcctttggtgatttctcacgaatgatttctcttcccatatctcgcagcaaat |
4351910 |
T |
|
| Q |
736 |
catgcattccaagtgtattcttatcatcgatagttacaaggcttctc |
782 |
Q |
| |
|
||||||| ||||| | || |||||||| | |||||||||||||| |
|
|
| T |
4351909 |
catgcatgccaagcttgtttttatcatcaacgattacaaggcttctc |
4351863 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 615 - 782
Target Start/End: Complemental strand, 4343742 - 4343575
Alignment:
| Q |
615 |
cttacagttttttcaaataaaacattaagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctc |
714 |
Q |
| |
|
|||||||| | ||| || || |||| |||||| || ||||||||||| ||||| | | | |||||||| | |||||| ||||| | |||||||||||||| |
|
|
| T |
4343742 |
cttacagtatgttctaacaagacatcaagcacgtcttcatgaaaccacaacctactatgttcctcaggctcctttggcgatttctcacgaatgatttctc |
4343643 |
T |
|
| Q |
715 |
ttcccatatcccgtaacaaatcatgcattccaagtgtattcttatcatcgatagttacaaggcttctc |
782 |
Q |
| |
|
|||||||||| || | |||||||||||| ||||| | ||||||||||| | |||||||||||||| |
|
|
| T |
4343642 |
ttcccatatctcgcagcaaatcatgcatgccaagcttgttcttatcatcaaccattacaaggcttctc |
4343575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 235 - 318
Target Start/End: Original strand, 7887387 - 7887470
Alignment:
| Q |
235 |
tcttgaaagatactcgaaatctccatcaagttgtactccagcaagttgaagcaatcttagtctctccatcttcttaaatgcttt |
318 |
Q |
| |
|
|||||||||||| | | ||||||||| |||||||| ||| |||||||||| |||||||| | |||||||||| ||||||||| |
|
|
| T |
7887387 |
tcttgaaagatatttgtaatctccattaagttgtatgccaacaagttgaagaaatcttagcttgtccatcttctcaaatgcttt |
7887470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 238 - 318
Target Start/End: Complemental strand, 6757576 - 6757496
Alignment:
| Q |
238 |
tgaaagatactcgaaatctccatcaagttgtactccagcaagttgaagcaatcttagtctctccatcttcttaaatgcttt |
318 |
Q |
| |
|
||||||||| | |||||||||| ||| ||||| ||| ||||||| |||||||| ||| | | |||||||||||||||||| |
|
|
| T |
6757576 |
tgaaagatatttaaaatctccattaagctgtaccccaacaagttgtagcaatctgagtttattcatcttcttaaatgcttt |
6757496 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 251 - 320
Target Start/End: Original strand, 6533532 - 6533601
Alignment:
| Q |
251 |
aaatctccatcaagttgtactccagcaagttgaagcaatcttagtctctccatcttcttaaatgctttag |
320 |
Q |
| |
|
|||||||||| ||||| || |||||||||||||||||||| || | | ||||||||||||||| |||| |
|
|
| T |
6533532 |
aaatctccattcagttgcacaccagcaagttgaagcaatctgagcttattcatcttcttaaatgcgttag |
6533601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 71; Significance: 1e-31; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 256 - 386
Target Start/End: Complemental strand, 8877053 - 8876923
Alignment:
| Q |
256 |
tccatcaagttgtactccagcaagttgaagcaatcttagtctctccatcttcttaaatgctttagcactaaaacattttgaactagttattggcaacttc |
355 |
Q |
| |
|
||||||||||||||| || ||||||||||||||||| ||||||| |||||||||||||||||||| |||||||| ||||| | | ||||||||||||| |
|
|
| T |
8877053 |
tccatcaagttgtacgccggcaagttgaagcaatctgagtctcttcatcttcttaaatgctttagtactaaaacgttttgcatcatctattggcaacttc |
8876954 |
T |
|
| Q |
356 |
aaagctaaaccctcaacagcttttgttccct |
386 |
Q |
| |
|
| ||| | |||||||||| |||||||||||| |
|
|
| T |
8876953 |
agagcaagaccctcaacaacttttgttccct |
8876923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 641 - 780
Target Start/End: Complemental strand, 8876578 - 8876439
Alignment:
| Q |
641 |
aagcacatcctcatgaaaccataacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaacaaatcatgc |
740 |
Q |
| |
|
||||||||||| | | |||| ||||||| |||||||||||||| |||||||||||| | |||||||||||||||||||||||| |||||||||||| |
|
|
| T |
8876578 |
aagcacatccttgttataccacaacctgctacgctcctcaggatcctttggtgatttctcacgaatgatttctcttcccatatctgtcaacaaatcatgc |
8876479 |
T |
|
| Q |
741 |
attccaagtgtattcttatcatcgatagttacaaggcttc |
780 |
Q |
| |
|
|||||||| ||||| | ||||| || ||||||||||||| |
|
|
| T |
8876478 |
attccaagcatattcctttcatccatggttacaaggcttc |
8876439 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 663 - 782
Target Start/End: Original strand, 22585570 - 22585689
Alignment:
| Q |
663 |
aacctgcaacgctcctcaggatactttggtgattttttacgaatgatttctcttcccatatcccgtaacaaatcatgcattccaagtgtattcttatcat |
762 |
Q |
| |
|
||||||| ||||| ||||||| ||||||||||| | | ||| ||| ||||||||||||| || | |||||||||||||||||| | |||||||||| |
|
|
| T |
22585570 |
aacctgctacgcttctcaggactctttggtgattcctcaagaacaattcctcttcccatatctcgcagcaaatcatgcattccaagcctgttcttatcat |
22585669 |
T |
|
| Q |
763 |
cgatagttacaaggcttctc |
782 |
Q |
| |
|
| | | | |||||||||||| |
|
|
| T |
22585670 |
caacactcacaaggcttctc |
22585689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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