View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5179-Insertion-7 (Length: 397)

Name: NF5179-Insertion-7
Description: NF5179
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5179-Insertion-7
NF5179-Insertion-7
[»] chr4 (39 HSPs)
chr4 (53-396)||(5732897-5733239)
chr4 (53-396)||(45347325-45347668)
chr4 (53-394)||(18855961-18856301)
chr4 (53-396)||(3814256-3814597)
chr4 (129-396)||(45356882-45357148)
chr4 (53-349)||(9228694-9228990)
chr4 (53-349)||(9223907-9224203)
chr4 (84-324)||(18712294-18712534)
chr4 (53-324)||(56141519-56141791)
chr4 (53-321)||(24742302-24742569)
chr4 (53-324)||(51520772-51521042)
chr4 (50-230)||(13992693-13992873)
chr4 (50-229)||(28467983-28468162)
chr4 (50-229)||(31495717-31495896)
chr4 (52-229)||(7122274-7122451)
chr4 (52-229)||(7124496-7124673)
chr4 (57-229)||(8392994-8393166)
chr4 (107-230)||(29761073-29761196)
chr4 (57-229)||(8395203-8395375)
chr4 (53-163)||(18860403-18860513)
chr4 (50-167)||(31985133-31985250)
chr4 (57-229)||(5135661-5135834)
chr4 (57-229)||(5137887-5138060)
chr4 (53-102)||(6742897-6742946)
chr4 (53-121)||(5148225-5148293)
chr4 (53-105)||(8689045-8689097)
chr4 (53-104)||(5143807-5143858)
chr4 (56-102)||(29761182-29761228)
chr4 (53-102)||(16628354-16628403)
chr4 (268-321)||(29761002-29761055)
chr4 (53-102)||(38151919-38151968)
chr4 (53-101)||(3778116-3778164)
chr4 (53-103)||(5268700-5268750)
chr4 (53-102)||(10047932-10047981)
chr4 (53-102)||(16622775-16622824)
chr4 (53-102)||(54867745-54867794)
chr4 (53-102)||(9194164-9194214)
chr4 (56-102)||(36314715-36314761)
chr4 (56-102)||(36328924-36328970)
[»] chr1 (32 HSPs)
chr1 (53-396)||(39445732-39446074)
chr1 (53-396)||(44023385-44023726)
chr1 (53-396)||(1054522-1054864)
chr1 (45-396)||(25439399-25439748)
chr1 (45-396)||(25444592-25444941)
chr1 (52-324)||(41390907-41391178)
chr1 (129-324)||(41398562-41398756)
chr1 (53-343)||(43987957-43988248)
chr1 (138-324)||(24786918-24787103)
chr1 (107-320)||(24793709-24793921)
chr1 (50-230)||(20622635-20622815)
chr1 (50-230)||(51764996-51765176)
chr1 (40-207)||(19365763-19365931)
chr1 (50-209)||(19360918-19361077)
chr1 (57-230)||(21053552-21053726)
chr1 (50-230)||(40281964-40282145)
chr1 (50-230)||(9986791-9986971)
chr1 (57-229)||(44203230-44203402)
chr1 (50-125)||(24202257-24202332)
chr1 (57-229)||(9036015-9036187)
chr1 (50-209)||(13604101-13604260)
chr1 (51-121)||(21536119-21536189)
chr1 (53-102)||(24793674-24793723)
chr1 (52-102)||(41398764-41398814)
chr1 (53-102)||(13598967-13599016)
chr1 (53-121)||(26644382-26644450)
chr1 (53-102)||(37070334-37070383)
chr1 (51-102)||(3282273-3282324)
chr1 (53-102)||(13659840-13659889)
chr1 (61-102)||(16124197-16124238)
chr1 (90-122)||(1192296-1192328)
chr1 (174-230)||(24202360-24202416)
[»] chr8 (33 HSPs)
chr8 (53-396)||(39784333-39784675)
chr8 (53-345)||(10683747-10684039)
chr8 (53-397)||(35745626-35745970)
chr8 (53-346)||(25327672-25327965)
chr8 (53-324)||(6311656-6311927)
chr8 (53-324)||(18852635-18852905)
chr8 (53-324)||(18870029-18870299)
chr8 (53-320)||(30656008-30656274)
chr8 (53-323)||(4759542-4759811)
chr8 (57-324)||(7289439-7289707)
chr8 (53-290)||(36979770-36980006)
chr8 (53-230)||(33037295-33037472)
chr8 (138-321)||(10688692-10688875)
chr8 (51-324)||(1261421-1261695)
chr8 (50-229)||(2627324-2627503)
chr8 (57-229)||(3439100-3439271)
chr8 (57-229)||(26288332-26288504)
chr8 (57-229)||(26301589-26301761)
chr8 (57-229)||(26313583-26313755)
chr8 (50-167)||(31042914-31043031)
chr8 (51-209)||(7412787-7412945)
chr8 (57-229)||(42575724-42575897)
chr8 (57-228)||(15290155-15290327)
chr8 (57-228)||(15470524-15470696)
chr8 (53-102)||(10688626-10688675)
chr8 (53-102)||(5701960-5702009)
chr8 (57-102)||(25689573-25689618)
chr8 (52-102)||(4456575-4456625)
chr8 (107-229)||(25689604-25689725)
chr8 (52-103)||(19175232-19175283)
chr8 (87-121)||(11383406-11383440)
chr8 (53-102)||(23799100-23799149)
chr8 (296-324)||(33037518-33037546)
[»] chr6 (46 HSPs)
chr6 (53-396)||(6438733-6439075)
chr6 (53-324)||(14741934-14742205)
chr6 (53-397)||(16838979-16839322)
chr6 (129-396)||(28155155-28155422)
chr6 (53-349)||(22010197-22010493)
chr6 (53-397)||(6005652-6005998)
chr6 (53-343)||(33329941-33330231)
chr6 (53-324)||(11857289-11857559)
chr6 (45-397)||(5343712-5344064)
chr6 (53-343)||(33335438-33335728)
chr6 (138-324)||(14737159-14737345)
chr6 (53-212)||(30125026-30125185)
chr6 (53-283)||(5674238-5674467)
chr6 (40-229)||(22709460-22709650)
chr6 (57-229)||(16578917-16579089)
chr6 (57-229)||(16616291-16616463)
chr6 (50-209)||(2171939-2172098)
chr6 (50-284)||(411691-411927)
chr6 (52-229)||(27647475-27647652)
chr6 (107-230)||(5266487-5266610)
chr6 (57-229)||(6136363-6136535)
chr6 (50-230)||(3073157-3073337)
chr6 (57-229)||(16554466-16554638)
chr6 (57-229)||(16631022-16631194)
chr6 (57-229)||(6026846-6027018)
chr6 (57-229)||(25420809-25420981)
chr6 (51-209)||(23896792-23896950)
chr6 (52-229)||(34166673-34166851)
chr6 (57-229)||(33342503-33342676)
chr6 (52-229)||(13150856-13151034)
chr6 (50-125)||(6097905-6097980)
chr6 (50-121)||(26253595-26253666)
chr6 (52-229)||(34164451-34164629)
chr6 (53-102)||(5266596-5266645)
chr6 (53-102)||(14737093-14737142)
chr6 (51-209)||(5756958-5757116)
chr6 (45-100)||(28155090-28155145)
chr6 (52-123)||(34151835-34151906)
chr6 (53-102)||(5016977-5017026)
chr6 (53-102)||(31085954-31086003)
chr6 (57-102)||(16652728-16652773)
chr6 (44-102)||(5571748-5571806)
chr6 (53-102)||(24714938-24714988)
chr6 (73-102)||(603772-603801)
chr6 (53-102)||(18234650-18234699)
chr6 (81-121)||(5413942-5413982)
[»] chr5 (51 HSPs)
chr5 (45-397)||(28807076-28807427)
chr5 (45-397)||(37560947-37561298)
chr5 (53-397)||(33791551-33791895)
chr5 (53-397)||(2785610-2785954)
chr5 (53-397)||(33768419-33768763)
chr5 (53-349)||(15044976-15045271)
chr5 (45-397)||(37556125-37556476)
chr5 (53-397)||(31396498-31396841)
chr5 (53-397)||(31401355-31401698)
chr5 (53-324)||(1456646-1456917)
chr5 (53-324)||(27450131-27450401)
chr5 (53-324)||(27445288-27445558)
chr5 (53-320)||(43599043-43599310)
chr5 (53-320)||(43604535-43604802)
chr5 (53-320)||(43610027-43610294)
chr5 (53-231)||(30631762-30631940)
chr5 (107-324)||(31180570-31180787)
chr5 (53-223)||(29402558-29402728)
chr5 (51-283)||(24136246-24136477)
chr5 (138-324)||(43592594-43592779)
chr5 (50-229)||(26177472-26177651)
chr5 (50-230)||(29719971-29720152)
chr5 (50-229)||(9789624-9789803)
chr5 (39-229)||(26170351-26170542)
chr5 (57-229)||(22536668-22536840)
chr5 (50-229)||(16407647-16407826)
chr5 (50-229)||(18442048-18442227)
chr5 (50-229)||(16409083-16409262)
chr5 (50-223)||(29722158-29722332)
chr5 (57-229)||(10592856-10593027)
chr5 (52-229)||(25077713-25077890)
chr5 (52-229)||(25135682-25135859)
chr5 (50-167)||(29752267-29752384)
chr5 (50-209)||(9352813-9352972)
chr5 (57-229)||(40379690-40379862)
chr5 (50-121)||(15465048-15465119)
chr5 (57-229)||(16546228-16546400)
chr5 (57-229)||(40381901-40382073)
chr5 (50-121)||(36931849-36931920)
chr5 (50-167)||(29751601-29751718)
chr5 (57-229)||(16544006-16544178)
chr5 (53-102)||(31180773-31180822)
chr5 (53-102)||(43592797-43592846)
chr5 (53-102)||(12083659-12083708)
chr5 (53-102)||(14520796-14520845)
chr5 (139-229)||(38219845-38219935)
chr5 (50-94)||(35388196-35388240)
chr5 (52-102)||(11916452-11916502)
chr5 (174-230)||(29751559-29751615)
chr5 (53-88)||(43625605-43625640)
chr5 (81-121)||(25412396-25412436)
[»] chr3 (71 HSPs)
chr3 (53-396)||(18656667-18657021)
chr3 (51-397)||(2672425-2672781)
chr3 (51-397)||(2676581-2676937)
chr3 (45-345)||(8512527-8512827)
chr3 (53-321)||(40372264-40372531)
chr3 (45-345)||(8517407-8517707)
chr3 (53-284)||(22172670-22172900)
chr3 (53-324)||(28503327-28503598)
chr3 (45-323)||(24968426-24968704)
chr3 (53-397)||(32475719-32476063)
chr3 (53-397)||(32480577-32480921)
chr3 (53-324)||(28501160-28501431)
chr3 (53-321)||(7167607-7167874)
chr3 (56-321)||(27352092-27352356)
chr3 (53-230)||(8477817-8477994)
chr3 (50-209)||(1306439-1306598)
chr3 (138-324)||(8738616-8738801)
chr3 (138-324)||(9090854-9091039)
chr3 (57-229)||(54634722-54634894)
chr3 (91-230)||(2671111-2671250)
chr3 (61-229)||(25637029-25637197)
chr3 (61-229)||(6716101-6716269)
chr3 (50-229)||(23200544-23200723)
chr3 (50-229)||(800691-800870)
chr3 (50-229)||(23198345-23198524)
chr3 (50-209)||(26928086-26928245)
chr3 (50-209)||(33386143-33386302)
chr3 (57-229)||(4598922-4599095)
chr3 (57-229)||(4601143-4601316)
chr3 (50-125)||(7782631-7782706)
chr3 (52-229)||(10055812-10055990)
chr3 (52-229)||(10058034-10058212)
chr3 (52-229)||(10060256-10060434)
chr3 (52-229)||(10062478-10062656)
chr3 (52-229)||(10064700-10064878)
chr3 (52-229)||(10066922-10067100)
chr3 (57-229)||(3617046-3617218)
chr3 (50-209)||(37408042-37408200)
chr3 (50-209)||(37726134-37726293)
chr3 (57-229)||(10208790-10208963)
chr3 (50-209)||(27453416-27453575)
chr3 (61-229)||(10210994-10211163)
chr3 (50-104)||(32143868-32143922)
chr3 (51-104)||(27974440-27974493)
chr3 (53-121)||(36029640-36029708)
chr3 (53-102)||(8738550-8738599)
chr3 (53-102)||(9090788-9090837)
chr3 (53-102)||(21711768-21711817)
chr3 (53-102)||(30709267-30709316)
chr3 (107-229)||(6718331-6718453)
chr3 (268-321)||(2671268-2671321)
chr3 (57-102)||(6718300-6718345)
chr3 (53-102)||(16264896-16264945)
chr3 (57-102)||(27027273-27027318)
chr3 (53-122)||(27038588-27038657)
chr3 (53-102)||(39032026-39032075)
chr3 (57-102)||(40734087-40734132)
chr3 (50-103)||(40845220-40845273)
chr3 (57-102)||(45282597-45282642)
chr3 (53-95)||(1730917-1730959)
chr3 (58-104)||(27985971-27986017)
chr3 (53-102)||(35926057-35926105)
chr3 (53-102)||(40592253-40592302)
chr3 (53-102)||(48438782-48438831)
chr3 (107-229)||(45282628-45282750)
chr3 (53-102)||(24694656-24694706)
chr3 (57-203)||(40735018-40735163)
chr3 (53-102)||(16498645-16498694)
chr3 (73-102)||(43404486-43404515)
chr3 (81-121)||(9634816-9634856)
chr3 (296-324)||(22172932-22172960)
[»] scaffold0464 (1 HSPs)
scaffold0464 (53-396)||(595-937)
[»] chr7 (47 HSPs)
chr7 (45-397)||(21811739-21812090)
chr7 (53-346)||(31109078-31109372)
chr7 (56-324)||(24023830-24024096)
chr7 (53-349)||(4873417-4873713)
chr7 (53-311)||(12406591-12406849)
chr7 (45-397)||(16880308-16880660)
chr7 (45-345)||(24265677-24265977)
chr7 (45-390)||(16885170-16885515)
chr7 (45-397)||(24260821-24261173)
chr7 (53-321)||(2058330-2058596)
chr7 (53-230)||(21640238-21640415)
chr7 (53-231)||(20357036-20357214)
chr7 (53-349)||(12397200-12397484)
chr7 (50-230)||(24789432-24789612)
chr7 (50-229)||(18409214-18409393)
chr7 (50-229)||(18414090-18414269)
chr7 (51-230)||(21646457-21646636)
chr7 (50-229)||(39730939-39731118)
chr7 (50-229)||(43504536-43504715)
chr7 (50-229)||(48408404-48408583)
chr7 (57-229)||(6592737-6592909)
chr7 (57-229)||(20343512-20343684)
chr7 (57-229)||(6594953-6595125)
chr7 (57-229)||(32060704-32060876)
chr7 (88-319)||(1532947-1533177)
chr7 (51-118)||(1532891-1532958)
chr7 (51-209)||(47264102-47264260)
chr7 (57-125)||(1562507-1562575)
chr7 (51-209)||(25767381-25767533)
chr7 (51-121)||(2479883-2479953)
chr7 (51-121)||(44847626-44847696)
chr7 (57-229)||(18392596-18392768)
chr7 (53-121)||(21983790-21983858)
chr7 (53-121)||(21989454-21989522)
chr7 (268-324)||(20357231-20357287)
chr7 (53-102)||(46515810-46515860)
chr7 (53-102)||(79955-80004)
chr7 (345-397)||(19992546-19992597)
chr7 (153-229)||(1562403-1562479)
chr7 (87-121)||(4509335-4509369)
chr7 (87-121)||(4511177-4511211)
chr7 (87-121)||(6431467-6431501)
chr7 (87-121)||(14070348-14070382)
chr7 (87-121)||(14380376-14380410)
chr7 (53-102)||(2647180-2647228)
chr7 (58-103)||(49092237-49092282)
chr7 (8-44)||(2575630-2575666)
[»] chr2 (27 HSPs)
chr2 (53-397)||(19344657-19345001)
chr2 (53-324)||(39811485-39811756)
chr2 (53-397)||(19349515-19349859)
chr2 (53-396)||(32247021-32247344)
chr2 (53-321)||(14291850-14292117)
chr2 (53-321)||(11098395-11098662)
chr2 (53-324)||(9295870-9296140)
chr2 (52-229)||(25410081-25410258)
chr2 (50-209)||(3492212-3492371)
chr2 (50-229)||(32289154-32289333)
chr2 (50-209)||(30832927-30833086)
chr2 (57-229)||(4484738-4484910)
chr2 (57-229)||(12647783-12647955)
chr2 (53-122)||(44310479-44310548)
chr2 (50-229)||(6266280-6266459)
chr2 (50-209)||(40739292-40739451)
chr2 (53-102)||(8389632-8389681)
chr2 (51-104)||(28258676-28258729)
chr2 (53-104)||(36757426-36757477)
chr2 (53-102)||(10706734-10706783)
chr2 (53-102)||(21630511-21630560)
chr2 (53-102)||(23077953-23078002)
chr2 (53-102)||(33528106-33528155)
chr2 (53-102)||(39483443-39483492)
chr2 (53-96)||(20522794-20522837)
chr2 (139-209)||(28258745-28258815)
chr2 (65-121)||(17865725-17865781)
[»] scaffold0355 (1 HSPs)
scaffold0355 (53-324)||(3345-3616)
[»] scaffold0135 (1 HSPs)
scaffold0135 (53-349)||(34562-34858)
[»] scaffold0259 (1 HSPs)
scaffold0259 (45-343)||(1739-2037)
[»] scaffold0028 (1 HSPs)
scaffold0028 (45-343)||(148444-148742)
[»] scaffold0197 (2 HSPs)
scaffold0197 (53-397)||(18672-19015)
scaffold0197 (45-345)||(13784-14084)
[»] scaffold0009 (1 HSPs)
scaffold0009 (57-322)||(176462-176727)
[»] scaffold0188 (1 HSPs)
scaffold0188 (50-229)||(17437-17616)
[»] scaffold0286 (1 HSPs)
scaffold0286 (50-229)||(21945-22124)
[»] scaffold0491 (2 HSPs)
scaffold0491 (50-229)||(9124-9302)
scaffold0491 (50-229)||(11569-11747)
[»] scaffold0665 (2 HSPs)
scaffold0665 (138-246)||(8091-8199)
scaffold0665 (53-102)||(8216-8265)
[»] scaffold0565 (1 HSPs)
scaffold0565 (57-229)||(3001-3173)
[»] scaffold0674 (1 HSPs)
scaffold0674 (57-229)||(4126-4298)
[»] scaffold0087 (2 HSPs)
scaffold0087 (51-209)||(43441-43599)
scaffold0087 (53-104)||(36333-36384)
[»] scaffold1455 (1 HSPs)
scaffold1455 (43-120)||(1707-1784)
[»] scaffold0140 (1 HSPs)
scaffold0140 (42-121)||(7908-7988)
[»] scaffold0510 (1 HSPs)
scaffold0510 (51-209)||(1090-1248)
[»] scaffold0006 (4 HSPs)
scaffold0006 (50-209)||(132758-132917)
scaffold0006 (53-102)||(6252-6301)
scaffold0006 (53-102)||(3060-3109)
scaffold0006 (53-102)||(149601-149650)
[»] scaffold1519 (1 HSPs)
scaffold1519 (81-189)||(519-627)
[»] scaffold0137 (1 HSPs)
scaffold0137 (57-229)||(5871-6044)
[»] scaffold0098 (1 HSPs)
scaffold0098 (50-104)||(45744-45798)
[»] scaffold0466 (1 HSPs)
scaffold0466 (87-121)||(6750-6784)
[»] scaffold0036 (1 HSPs)
scaffold0036 (53-102)||(86153-86203)


Alignment Details
Target: chr4 (Bit Score: 249; Significance: 1e-138; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 53 - 396
Target Start/End: Complemental strand, 5733239 - 5732897
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||  ||||||||||||| ||    
T  5733239 ttggcttcaaatttgtggtctgaaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcgtggtgccgtgaagcaagtttgcaggacgc 5733140  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
    |||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5733139 caaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 5733040  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaagagagcttaa 351  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| | ||||| ||||||||||||||||||    
T  5733039 gtgacacgatctagggaaatcgtggcacgatttcttcaggggaggactagtatatattgtgttcttgtg-ttttttgaagacaaccttaagagagcttaa 5732941  T
Q  352 gagagaaaaatttggaggtcagagaggggatcctatggggtgtgt 396  Q
    ||||| |||| |||||| ||| |||||||||||||||||||||||    
T  5732940 gagag-aaaacttggagatcaaagaggggatcctatggggtgtgt 5732897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 53 - 396
Target Start/End: Original strand, 45347325 - 45347668
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||| ||||||||||||||  | | | | ||||||||||||||| ||||||    
T  45347325 ttggcttcaaatttgtggtctggaagaacaaagaaatcgtgacacgattttggaatcgtgacacgatta-gagatgccgtgagccaagtttgctggatgc 45347423  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
     ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  45347424 aaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaacctgggaaccgttgcagatc 45347523  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaagagagcttaa 351  Q
    ||||||| ||||||||||||||||||||||||||||||||| |  |||||||||||||||||||||||||||| | ||||| ||||||||||||||||||    
T  45347524 gtgacacgatctagggaaatcgtggcacgatttcttcaggggaaaactagtatatattgtgttcttgtgcttttttgaagacaaccttaagagagcttaa 45347623  T
Q  352 gagagaaaaatttggaggtcagagaggggatcctatggggtgtgt 396  Q
    |||||||||  |||||| ||| |||||||||||||||||||||||    
T  45347624 gagagaaaatcttggagatcaaagaggggatcctatggggtgtgt 45347668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 53 - 394
Target Start/End: Complemental strand, 18856301 - 18855961
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||  | ||| | ||||||||||||||| ||||||    
T  18856301 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattg-gaggtgccgtgagccaagtttgctggatgc 18856203  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
     ||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  18856202 aaaatcgtggcaagatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaacctgggaaccgttgcagatc 18856103  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaagagagcttaa 351  Q
    ||||||  ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||    
T  18856102 gtgacatgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttgaagacaaccttaagagagcttaa 18856003  T
Q  352 gagagaaaaatttggaggtcagagaggggatcctatggggtgt 394  Q
    ||||| |||  |||||| ||| |||||||| ||||||||||||    
T  18856002 gagag-aaatcttggagatcaaagaggggagcctatggggtgt 18855961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 53 - 396
Target Start/End: Complemental strand, 3814597 - 3814256
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |  || || ||| ||||||||| || ||    
T  3814597 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtgaccgtaagc-aagtttgcaagacgc 3814499  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
    |||||| || |||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  3814498 caaatcgtgtcacgat-ttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaacctgagaaccgttgcagatc 3814400  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaagagagcttaa 351  Q
    ||||||  |||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||||| | ||||| ||||||| ||||||||||    
T  3814399 gtgacaagatctagggaaatcgtgacacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttgaagacaaccttaggagagcttaa 3814300  T
Q  352 gagagaaaaatttggaggtcagagaggggatcctatggggtgtgt 396  Q
    ||||| |||| |||||  ||| ||  |||||||||||||||||||    
T  3814299 gagag-aaaacttggacatcaaaggagggatcctatggggtgtgt 3814256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 129 - 396
Target Start/End: Original strand, 45356882 - 45357148
Alignment:
Q  129 cgtgagccaagtttgcaggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggt 228  Q
    |||||||||||||||| |||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  45356882 cgtgagccaagtttgctggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggt 45356981  T
Q  229 caacctggggaccgttgcagatcgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtag 328  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||| | |    
T  45356982 caacctgggaaccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttctggggaggactagtatatattgtgttcttgtgcttttttg 45357081  T
Q  329 aagataaccttaagagagcttaagagagaaaaatttggaggtcagagaggggatcctatggggtgtgt 396  Q
    |||| ||||||||||||||||||||||| |||  |||||| ||| |||||||||||||||||||||||    
T  45357082 aagacaaccttaagagagcttaagagag-aaatcttggagatcaaagaggggatcctatggggtgtgt 45357148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 53 - 349
Target Start/End: Original strand, 9228694 - 9228990
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc--gtggtacgtgagccaagtttgcaggatg 150  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||  |||||||   |||||||||| |    
T  9228694 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggc-cgtgagctc-gtttgcaggacg 9228791  T
Q  151 ccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagat 250  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||| |||| ||| |||||||||||    
T  9228792 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttgggtccgttgcagat 9228891  T
Q  251 cgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaagagagctt 349  Q
    |||||||| ||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||| | ||||  || |||||||||||||    
T  9228892 cgtgacacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttgaagtgaatcttaagagagctt 9228990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 53 - 349
Target Start/End: Original strand, 9223907 - 9224203
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc--gtggtacgtgagccaagtttgcaggatg 150  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||  ||||||| | |||||||||| |    
T  9223907 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggc-cgtgagcta-gtttgcaggacg 9224004  T
Q  151 ccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagat 250  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||| |||| ||| |||||||||||    
T  9224005 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttgggtccgttgcagat 9224104  T
Q  251 cgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaagagagctt 349  Q
    |||||||| |||||||||||||||||||| |||||||||| | | |||||||||||||||||||||| |||||| | ||||  || |||||||||||||    
T  9224105 cgtgacacgatctagggaaatcgtggcacaatttcttcagaggaagactagtatatattgtgttcttctgcttttttgaagtgaatcttaagagagctt 9224203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 84 - 324
Target Start/End: Original strand, 18712294 - 18712534
Alignment:
Q  84 agaaatcgtgacacgattttggcatcgtgacacgatttc--gtggtacgtgagccaagtttgcaggatgccaaatcatggcacgatcttgggaaatcgtg 181  Q
    |||||||||||||||||||||||||||||||||||||||  ||||  ||||||| | |||||||||| |||||||| |||||||||||||||||||||||    
T  18712294 agaaatcgtgacacgattttggcatcgtgacacgatttcaagtggc-cgtgagcta-gtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtg 18712391  T
Q  182 acatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacaatctagggaaatcgtggcacga 281  Q
    ||| |||||||||||||||| ||||||||||||||||||||||| |||||||| ||| |||||| |||||||||||||||||||| ||||||||||||||    
T  18712392 acacgattcagaaacttgctcgttaagtatcactgataaggacttgtcaaccttgggtccgttgaagatcgtgacacaatctaggaaaatcgtggcacga 18712491  T
Q  282 tttcttcagggcaggactagtatatattgtgttcttgtgcttt 324  Q
    ||||||||||| | |||||||||||||||||||||||||||||    
T  18712492 tttcttcaggggaagactagtatatattgtgttcttgtgcttt 18712534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 53 - 324
Target Start/End: Original strand, 56141519 - 56141791
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggta-cgtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||   ||||||| | |||||||||| ||    
T  56141519 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttggaggggtcgtgagcta-gtttgcaggacgc 56141617  T
Q  152 caaa-tcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagat 250  Q
    |||| || |||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||| |||| ||| | | |||| ||    
T  56141618 caaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgggtcagatgcaaat 56141717  T
Q  251 cgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttt 324  Q
    |||||||| |||| |||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||    
T  56141718 cgtgacacgatcttgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttt 56141791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 53 - 321
Target Start/End: Complemental strand, 24742569 - 24742302
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||| | |||||||||| ||    
T  24742569 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagcta-gtttgcaggacgc 24742471  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtca-acctggggaccgttgcagat 250  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||||||||| ||||||| || |  ||| ||    
T  24742470 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcatacctgggaacggacgcaaat 24742371  T
Q  251 cgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgc 321  Q
    |||| ||| ||||  |||||||||| |||||||||||||| | | ||||||||||||||||||||||||||    
T  24742370 cgtgccacgatct--ggaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgc 24742302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 53 - 324
Target Start/End: Complemental strand, 51521042 - 51520772
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||  | |||||| | |||||||||| ||    
T  51521042 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagcta-gtttgcaggacgc 51520944  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
    |||||| |||||||||||||||||||| ||||| |||||||||||||||| |||||||||| ||||||||||||| || |||| ||| | |  ||| |||    
T  51520943 caaatcgtggcacgatcttgggaaatcatgacacgattcagaaacttgctcgttaagtatccctgataaggactgatctaccttgggtcagacgcaaatc 51520844  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttt 324  Q
    ||||||| || | ||||||||||||||| ||| |||||| | | | |||||||||||||||||||||||||||    
T  51520843 gtgacacgat-ttgggaaatcgtggcacaattgcttcagaggaaggctagtatatattgtgttcttgtgcttt 51520772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 50 - 230
Target Start/End: Complemental strand, 13992873 - 13992693
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |  |||||| |  |||||||||     
T  13992873 gatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgtcgtgag-ctggtttgcaggg 13992775  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtca 230  Q
    ||||||||| || |||||| |||||||||||||||| ||||   ||||||||| ||||||| |   ||||||||||||||||    
T  13992774 tgccaaatcgtgacacgattttgggaaatcgtgacacgattttcaaacttgctcgttaagttttcatgataaggactggtca 13992693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 50 - 229
Target Start/End: Original strand, 28467983 - 28468162
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||| ||||||||| ||| |  |||||| |  |||||||||     
T  28467983 gatttggcttcaaatttgtggtatggaagaacagagaaatcgtgacacgaatttggcatcgtaacacgattttgtgatgccgtgag-ctggtttgcaggg 28468081  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    ||||||||| || ||||||||||| ||||||||||| ||||   ||||||||| ||||||| ||  |||||||||||||||    
T  28468082 tgccaaatcgtgacacgatcttggaaaatcgtgacacgattttcaaacttgctcgttaagtttctatgataaggactggtc 28468162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 50 - 229
Target Start/End: Complemental strand, 31495896 - 31495717
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    |||||| |||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |  |||||| |  |||||||||     
T  31495896 gatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgag-ctggtttgcaggg 31495798  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    ||||||||| || ||||||  ||||||||||||||| ||||   ||||||||| ||||||| ||  |||||||||||||||    
T  31495797 tgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 31495717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 52 - 229
Target Start/End: Original strand, 7122274 - 7122451
Alignment:
Q  52 tttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgc 151  Q
    |||| |||||||||| |||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||     ||||||| | | |||||||        
T  7122274 tttgtcttcaaatttgtggtgtggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttgcaggggtg 7122373  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    |||||| |||||||||  ||||||||||||||| ||| |||||||||||| ||||||||||  |||||||||||||||    
T  7122374 caaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 7122451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 52 - 229
Target Start/End: Original strand, 7124496 - 7124673
Alignment:
Q  52 tttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgc 151  Q
    |||| |||||||||| |||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||     ||||||| | | |||||||        
T  7124496 tttgtcttcaaatttgtggtgtggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttgcaggggtg 7124595  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    |||||| |||||||||  ||||||||||||||| ||| |||||||||||| ||||||||||  |||||||||||||||    
T  7124596 caaatcgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 7124673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 57 - 229
Target Start/End: Original strand, 8392994 - 8393166
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgccaaat 156  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||     ||||||| | | |||||||    |||||    
T  8392994 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcaggggtgcaaat 8393093  T
Q  157 catggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    | ||||||||| | || ||||||||||| ||| |||||||||||| ||||||||||  |||||||||||||||    
T  8393094 cgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccgtgataaggactggtc 8393166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 107 - 230
Target Start/End: Complemental strand, 29761196 - 29761073
Alignment:
Q  107 atcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggtt 205  Q
    ||||||||||||||||| ||| | |||||| | |||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||| |||    
T  29761196 atcgtgacacgatttcgaggtgccgtgagcta-gtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgtt 29761098  T
Q  206 aagtatcactgataaggactggtca 230  Q
    |||||||  ||||||||||||||||    
T  29761097 aagtatccttgataaggactggtca 29761073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 57 - 229
Target Start/End: Original strand, 8395203 - 8395375
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgccaaat 156  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||     ||||||| | | |||||||    |||||    
T  8395203 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcaggggtgcaaat 8395302  T
Q  157 catggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    | | ||||||| | || |||||||||||  || |||||||||||| ||||||||||  |||||||||||||||    
T  8395303 cgtagcacgatttgggaaaatcgtgacacaatccagaaacttgctcgttaagtatccgtgataaggactggtc 8395375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 53 - 163
Target Start/End: Complemental strand, 18860513 - 18860403
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| || | |||  |||||||||||||||| ||||||    
T  18860513 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacga-ttggaggtgccgtgagccaagtttgctggatgc 18860415  T
Q  152 caaatcatggca 163  Q
     ||||| |||||    
T  18860414 aaaatcgtggca 18860403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 50 - 167
Target Start/End: Original strand, 31985133 - 31985250
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggta-cgtgagccaagtttgcagga 148  Q
    ||||||||||||||||| || |||| |||||||||||||||||||||||| ||||||||||||||||||||| ||| || |||||| | |||| |||||     
T  31985133 gatttggcttcaaatttgtgatctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgataccgtgag-ctagttagcaggg 31985231  T
Q  149 tgccaaatcatggcacgat 167  Q
    ||||||||| || ||||||    
T  31985232 tgccaaatcgtgacacgat 31985250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 57 - 229
Target Start/End: Original strand, 5135661 - 5135834
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgccaaat 156  Q
    |||||||||| |||  ||||||||||| ||||||||||||||||||||| |||||||| ||||||||     ||||||  | | |||||||    |||||    
T  5135661 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtgcaaat 5135760  T
Q  157 catggcacgatcttggg-aaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    | || |||||| ||||| ||||||||||| |||  ||||||||||| ||||||||||  |||||||||| ||||    
T  5135761 cgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggaccggtc 5135834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 57 - 229
Target Start/End: Original strand, 5137887 - 5138060
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgccaaat 156  Q
    |||||||||| |||  ||||||||||| ||||||||||||||||||||| |||||||| ||||||||     ||||||  | | |||||||    |||||    
T  5137887 cttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtgcaaat 5137986  T
Q  157 catggcacgatcttggg-aaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    | || |||||| ||||| ||||||||||| |||  ||||||||||| ||||||||||  |||||||||| ||||    
T  5137987 cgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggaccggtc 5138060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 6742897 - 6742946
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  6742897 ttggcttcaaatttatggtttggaagaacagagaaatcgtgacacgattt 6742946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 5148293 - 5148225
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 121  Q
    |||||||||||||| |||| |||||||| ||||||||||||||||||||||  || |||||||||||||    
T  5148293 ttggcttcaaatttgtggtttggaagaatagagaaatcgtgacacgattttatcaccgtgacacgattt 5148225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 53 - 105
Target Start/End: Original strand, 8689045 - 8689097
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttgg 105  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  8689045 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttgg 8689097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 53 - 104
Target Start/End: Complemental strand, 5143858 - 5143807
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttg 104  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  5143858 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttg 5143807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 56 - 102
Target Start/End: Complemental strand, 29761228 - 29761182
Alignment:
Q  56 gcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||    
T  29761228 gcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 29761182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 16628354 - 16628403
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  16628354 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 16628403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 268 - 321
Target Start/End: Complemental strand, 29761055 - 29761002
Alignment:
Q  268 aaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgc 321  Q
    ||||||||||||||||||||||| | | ||||||||||||||||||||||||||    
T  29761055 aaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 29761002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 38151919 - 38151968
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  38151919 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 38151968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 53 - 101
Target Start/End: Complemental strand, 3778164 - 3778116
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgatt 101  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||    
T  3778164 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatt 3778116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 53 - 103
Target Start/End: Original strand, 5268700 - 5268750
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgatttt 103  Q
    |||||||||||||| |||| |||||||||||||||||||||||| ||||||    
T  5268700 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacaggatttt 5268750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 10047981 - 10047932
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| |||| |||||||||||| |||||||||||||||||    
T  10047981 ttggcttcaaatttgtggtttggaagaacagataaatcgtgacacgattt 10047932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 16622775 - 16622824
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    ||||||| |||||| |||| ||||||||||||||||||||||||||||||    
T  16622775 ttggcttaaaatttgtggtttggaagaacagagaaatcgtgacacgattt 16622824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 54867794 - 54867745
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| |||| |||||||| |||||| ||||||||||||||    
T  54867794 ttggcttcaaatttgtggtttggaagaatagagaagtcgtgacacgattt 54867745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 9194214 - 9194164
Alignment:
Q  53 ttggcttcaaatttatggtct-ggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| |||| | |||||||||||||||| ||||||||||||    
T  9194214 ttggcttcaaatttgtggttttggaagaacagagaaattgtgacacgattt 9194164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 36314715 - 36314761
Alignment:
Q  56 gcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    ||||||||||| |||| | |||||| |||||||||||||||||||||    
T  36314715 gcttcaaatttgtggtttcgaagaatagagaaatcgtgacacgattt 36314761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 36328924 - 36328970
Alignment:
Q  56 gcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    ||||||||||| |||| | |||||| |||||||||||||||||||||    
T  36328924 gcttcaaatttgtggtttcgaagaatagagaaatcgtgacacgattt 36328970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 245; Significance: 1e-136; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 245; E-Value: 1e-136
Query Start/End: Original strand, 53 - 396
Target Start/End: Complemental strand, 39446074 - 39445732
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| | | | | ||||||||||||||||||| ||    
T  39446074 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattt-gagatgccgtgagccaagtttgcaggacgc 39445976  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
    |||||| |||||||||||||||||||| ||||| ||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  39445975 caaatcgtggcacgatcttgggaaatcatgacacgatccagaaacttgctcgttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 39445876  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaagagagcttaa 351  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||    
T  39445875 gtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttttttgaagacaaccttaagagagcttaa 39445776  T
Q  352 gagagaaaaatttggaggtcagagaggggatcctatggggtgtgt 396  Q
    ||||| |||  |||||| ||| |||||||||||||||||||||||    
T  39445775 gagag-aaatcttggagatcaaagaggggatcctatggggtgtgt 39445732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 53 - 396
Target Start/End: Original strand, 44023385 - 44023726
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||  | ||| | ||||||||||||||| ||||||    
T  44023385 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattg-gaggtgccgtgagccaagtttgctggatgc 44023483  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
     ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44023484 aaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 44023583  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaagagagcttaa 351  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| | || |||||||||||||||||||||    
T  44023584 gtgacacgatctagggaaatcgtggcacgatttcttcaggggaggactggtatatattgtgttcttgtgcttt-ttgaggataaccttaagagagcttaa 44023682  T
Q  352 gagagaaaaatttggaggtcagagaggggatcctatggggtgtgt 396  Q
    ||||| |||  |||||| ||| |||||||||||||||||||||||    
T  44023683 gagag-aaatcttggagatcaaagaggggatcctatggggtgtgt 44023726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 53 - 396
Target Start/End: Original strand, 1054522 - 1054864
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||| ||||||  | ||| | ||||||||||||||||||| ||    
T  1054522 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgtcacgattttggaatcgtgatacgattg-gaggtgccgtgagccaagtttgcaggacgc 1054620  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  1054621 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctagttaagtatcactgataaggactggtcaacctgggaaccgttgcagatc 1054720  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaagagagcttaa 351  Q
    ||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||    
T  1054721 gtgacacgatctagggaaatcgtgacacgatttcttcaggggaggactagtatatattgtgttcttgtgcttttttgaagacaaccttaagagagcttaa 1054820  T
Q  352 gagagaaaaatttggaggtcagagaggggatcctatggggtgtgt 396  Q
    ||||| |||  |||||| ||| |||||||||||||||||||||||    
T  1054821 gagag-aaatcttggagatcaaagaggggatcctatggggtgtgt 1054864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 45 - 396
Target Start/End: Original strand, 25439399 - 25439748
Alignment:
Q  45 tgttggatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttg 143  Q
    ||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||| |  ||||||||||||||| | | | | ||||||||||||||    
T  25439399 tgttggaattggcttcaaatttgtggtctggaagaacagagcaatcgtgacacgatttggtaatcgtgacacgattt-gagatgccgtgagccaagtttg 25439497  T
Q  144 caggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgt 243  Q
    |||||||| ||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||    
T  25439498 caggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactggtcaacctggggactgt 25439597  T
Q  244 tgcagatcgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaaga 343  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| | ||||| ||||||||||    
T  25439598 tgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaggactagtatttattgtgttcttgtgcttt-ttgaagacaaccttaaga 25439696  T
Q  344 gagcttaagagagaaaaatttggaggtcagagaggggatcctatggggtgtgt 396  Q
    ||||||||||||| |||  |||||| ||| |||||||||||||||||||||||    
T  25439697 gagcttaagagag-aaatcttggagatcaaagaggggatcctatggggtgtgt 25439748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 45 - 396
Target Start/End: Original strand, 25444592 - 25444941
Alignment:
Q  45 tgttggatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttg 143  Q
    ||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||| |  ||||||||||||||| | | | | ||||||||||||||    
T  25444592 tgttggaattggcttcaaatttgtggtctggaagaacagagcaatcgtgacacgatttggtaatcgtgacacgattt-gagatgccgtgagccaagtttg 25444690  T
Q  144 caggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgt 243  Q
     ||||||| ||||| |||||||||||||||||||||||||| ||| |||||||||| |||||||||||| ||||||||||||||||||||| ||||||||    
T  25444691 taggatgcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgttggttaagtatctctgataaggactggtcaacctagggaccgt 25444790  T
Q  244 tgcagatcgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaaga 343  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| | ||||| ||||||||||    
T  25444791 tgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaggactagtatttattgtgttcttgtgcttt-ttgaagacaaccttaaga 25444889  T
Q  344 gagcttaagagagaaaaatttggaggtcagagaggggatcctatggggtgtgt 396  Q
    ||||||||||||| |||  |||||| ||| |||||||||||||||||||||||    
T  25444890 gagcttaagagag-aaatcttggagatcaaagaggggatcctatggggtgtgt 25444941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 52 - 324
Target Start/End: Complemental strand, 41391178 - 41390907
Alignment:
Q  52 tttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatg 150  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| | | | | |||||||| |||||||||| |    
T  41391178 tttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattt-gagatgccgtgagcca-gtttgcaggacg 41391081  T
Q  151 ccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagat 250  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||| |||||||    
T  41391080 ccaaatcgtggcacgatcttgggaaatcgtgacatgattcagaaacttgctcattaagtatcactgataaggactggtcaacctggggtccgctgcagat 41390981  T
Q  251 cgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttt 324  Q
    |||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  41390980 cgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttt 41390907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 129 - 324
Target Start/End: Complemental strand, 41398756 - 41398562
Alignment:
Q  129 cgtgagccaagtttgcaggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggt 228  Q
    ||||||||| |||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||  |||||||||| ||||||||||||||    
T  41398756 cgtgagcca-gtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcattgataaggactggt 41398658  T
Q  229 caacctggggaccgttgcagatcgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttt 324  Q
    |||||||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  41398657 caacctggggtccgctgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttt 41398562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 53 - 343
Target Start/End: Original strand, 43987957 - 43988248
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc-gtggtacgtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||| ||| ||| ||||| ||||||| | |||||| |  |||||||||||||    | || | ||||||||||||||| ||| ||    
T  43987957 ttggcttcaaatttgtggtttgggagagcagaggaatcgtgtcgcgatttggcaatcgtgacacgatcagagaggca-gtgagccaagtttgctggaagc 43988055  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
     ||||| || ||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||    
T  43988056 aaaatcgtgccacgatcttggtaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacttggggaccgttgcatatc 43988155  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgc-tttgtagaagataaccttaaga 343  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||  ||| |||||||| ||| | | ||||||||||||||    
T  43988156 gtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgctcttgtgcattttttggagataaccttaaga 43988248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 138 - 324
Target Start/End: Original strand, 24786918 - 24787103
Alignment:
Q  138 agtttgcaggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc-aacctgg 236  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||  ||||||||||||||| ||||| |    
T  24786918 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcaaaccttg 24787017  T
Q  237 ggaccgttgcagatcgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttt 324  Q
    || | |  ||| |||||||||| ||||  |||||||||||||||||| |||||| | | |||||||||||||||||||||||||||||    
T  24787018 ggtcagacgcaaatcgtgacacgatct--ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttt 24787103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 107 - 320
Target Start/End: Original strand, 24793709 - 24793921
Alignment:
Q  107 atcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggtt 205  Q
    ||||||||||||||||| ||| | |||||| | |||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||| |||    
T  24793709 atcgtgacacgatttcgaggtgccgtgagcta-gtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgtt 24793807  T
Q  206 aagtatcactgataaggactggtc-aacctggggaccgttgcagatcgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtat 304  Q
    |||||||  ||||||||||||||| ||||| ||| | |  ||| |||||||||| ||||  |||||||||||||||||| |||||| | | |||||||||    
T  24793808 aagtatccttgataaggactggtcaaaccttgggtcagacgcaaatcgtgacacgatct--ggaaatcgtggcacgattgcttcagaggaagactagtat 24793905  T
Q  305 atattgtgttcttgtg 320  Q
    ||||||||||||||||    
T  24793906 atattgtgttcttgtg 24793921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 50 - 230
Target Start/End: Complemental strand, 20622815 - 20622635
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    |||||| |||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||  |||||| | ||| ||||||     
T  20622815 gatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgag-ctagtctgcaggg 20622717  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtca 230  Q
    ||||||||| || ||||||  ||||||||||||||| ||||  |||||||||| ||||||||||  ||||||||||||||||    
T  20622716 tgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtca 20622635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 50 - 230
Target Start/End: Original strand, 51764996 - 51765176
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    |||||||||| |||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||||||| |  |||||| |  |||||||||     
T  51764996 gatttggctttaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgatttcgtgatgccgtgag-ctggtttgcaggg 51765094  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtca 230  Q
    ||||||||| || |||||||||| | |||||||||| ||||   ||||||||| ||||||| ||  ||||||||||||||||    
T  51765095 tgccaaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtca 51765176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 40 - 207
Target Start/End: Original strand, 19365763 - 19365931
Alignment:
Q  40 atatgtgttg-gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagcca 137  Q
    |||||||||| |||||| |||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||| |  |||||| |     
T  19365763 atatgtgttgagatttgacttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgag-ct 19365861  T
Q  138 agtttgcaggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaa 207  Q
     ||||||||| ||||||||| || ||||||||||||||||||||||| ||||   ||||||||| |||||    
T  19365862 ggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaa 19365931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 50 - 209
Target Start/End: Original strand, 19360918 - 19361077
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||| ||||||||||||||| ||| |  |||||| |  |||||||||     
T  19360918 gatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgag-ctggtttgcaggg 19361016  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagt 209  Q
    ||||||||| || ||||||||||||||||||||||| ||||   ||||||||| |||||||    
T  19361017 tgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagt 19361077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 57 - 230
Target Start/End: Original strand, 21053552 - 21053726
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgccaaa 155  Q
    |||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| | ||||| | ||  |||| | |||||||    
T  21053552 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgcagtgag-ctagaatgcaaggtgccaaa 21053650  T
Q  156 tcatggcacgatcttgggaaatcgtgacatgattcag-aaacttgctggttaagtatcactgataaggactggtca 230  Q
    || || ||||||  ||||||||||||||| ||||  | ||||||||| ||||||| ||  ||||||||||||||||    
T  21053651 tcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtca 21053726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 50 - 230
Target Start/End: Original strand, 40281964 - 40282145
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    |||||| |||||||||| ||||||||||||| || ||||||||||||||| ||||||||||||||||||||| |||||  |||||| | || |||||||     
T  40281964 gatttgtcttcaaatttgtggtctggaagaatagggaaatcgtgacacgaatttggcatcgtgacacgatttagtggtgccgtgag-ctaggttgcaggg 40282062  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcag-aaacttgctggttaagtatcactgataaggactggtca 230  Q
    ||||||||| || ||||||  ||| ||||||||||| ||||  | ||||||||| ||||||| ||  ||||||||||||||||    
T  40282063 tgccaaatcgtgacacgattgtggtaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtca 40282145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 50 - 230
Target Start/End: Original strand, 9986791 - 9986971
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    |||||| |||||||||| |||||||||||||||| ||||||||||||||| |||| |||||| |||||||||||||||  |||||| |  || |||||      
T  9986791 gatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttgacatcgtaacacgatttcgtggtgccgtgag-ctggtctgcagtg 9986889  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtca 230  Q
    ||||||||| || |||||| |||||||||||||||| ||||   ||||||||| ||||||| ||  | ||||||||||||||    
T  9986890 tgccaaatcgtgacacgattttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccataataaggactggtca 9986971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 57 - 229
Target Start/End: Original strand, 44203230 - 44203402
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgccaaa 155  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||| || | |||  ||||||| | | |||||||    ||||    
T  44203230 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggaatcgtgacacga-ttggaggtgccgtgagctagggttgcaggggtgcaaa 44203328  T
Q  156 tcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    || ||||||||| | || ||||||||||| ||| |||||||||||| ||||||||||  |||||||||||||||    
T  44203329 tcgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 44203402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 24202257 - 24202332
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtg 125  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  24202257 gatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtg 24202332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 57 - 229
Target Start/End: Original strand, 9036015 - 9036187
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgccaaa 155  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||  |||||| | || ||||||| ||| ||     
T  9036015 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgag-ctaggttgcagggtgcaaat 9036113  T
Q  156 tcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    || || ||| || |||  ||||||||||| |||   |||||||||| ||||||||||  |||||||||||||||    
T  9036114 tcgtgtcactattttgttaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 9036187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 50 - 209
Target Start/End: Original strand, 13604101 - 13604260
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    |||||| |||||||||| |||| ||||||||||||||||||||||||||||| ||| |||||| |||||||| ||| |  |||||| |  ||||||||      
T  13604101 gatttgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggtatcgtggcacgattttgtgatgtcgtgag-ctggtttgcagtg 13604199  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagt 209  Q
    || |||||| || |||||| ||| | |||||||||||||||   |||||||||||||||||    
T  13604200 tgtcaaatcgtgacacgattttgtggaatcgtgacatgattttcaaacttgctggttaagt 13604260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 51 - 121
Target Start/End: Original strand, 21536119 - 21536189
Alignment:
Q  51 atttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 121  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||   || |||||||||||||    
T  21536119 atttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatttcatcaacgtgacacgattt 21536189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 24793674 - 24793723
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24793674 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 24793723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 41398814 - 41398764
Alignment:
Q  52 tttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  41398814 tttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgattt 41398764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 13599016 - 13598967
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  13599016 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 13598967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 53 - 121
Target Start/End: Original strand, 26644382 - 26644450
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 121  Q
    ||||||| |||||| |||| ||||||||||||| |||||||| ||||||||| |||||| |||||||||    
T  26644382 ttggctttaaatttgtggtttggaagaacagaggaatcgtgatacgattttgtcatcgtaacacgattt 26644450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 37070383 - 37070334
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||| ||||||||| |||| ||||||||||||||||||||||||||||||    
T  37070383 ttggtttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 37070334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 102
Target Start/End: Complemental strand, 3282324 - 3282273
Alignment:
Q  51 atttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||||| ||||  ||||||||||| |||||||||||||||||    
T  3282324 atttggcttcaaatttgtggttaggaagaacagaaaaatcgtgacacgattt 3282273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 13659889 - 13659840
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| |||| ||||  |||||||||||||||||| |||||    
T  13659889 ttggcttcaaatttgtggtttggagaaacagagaaatcgtgacatgattt 13659840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 102
Target Start/End: Original strand, 16124197 - 16124238
Alignment:
Q  61 aaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||| |||| |||||||||||||||||||||| |||||||    
T  16124197 aaatttgtggtttggaagaacagagaaatcgtgatacgattt 16124238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 90 - 122
Target Start/End: Original strand, 1192296 - 1192328
Alignment:
Q  90 cgtgacacgattttggcatcgtgacacgatttc 122  Q
    ||||| |||||||||||||||||||||||||||    
T  1192296 cgtgatacgattttggcatcgtgacacgatttc 1192328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 174 - 230
Target Start/End: Original strand, 24202360 - 24202416
Alignment:
Q  174 aaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtca 230  Q
    ||||||||||| ||||   ||||||||| ||||||||||  ||||||||||||||||    
T  24202360 aaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtca 24202416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 241; Significance: 1e-133; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 53 - 396
Target Start/End: Original strand, 39784333 - 39784675
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||  | ||| | ||||||||||||||| ||||||    
T  39784333 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattg-gaggtgccgtgagccaagtttgctggatgc 39784431  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
     ||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39784432 aaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 39784531  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaagagagcttaa 351  Q
    ||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||    
T  39784532 gtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttgaagagaaccttaagagagcttaa 39784631  T
Q  352 gagagaaaaatttggaggtcagagaggggatcctatggggtgtgt 396  Q
    ||||| |||  |||||| ||| |||||||||||||||||||||||    
T  39784632 gagag-aaatcttggagatcaaagaggggatcctatggggtgtgt 39784675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 53 - 345
Target Start/End: Original strand, 10683747 - 10684039
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||  |||||| | ||||||||||| ||    
T  10683747 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgag-ctagtttgcaggacgc 10683845  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  10683846 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataaggactggtcaacttggggaccgttgcagatc 10683945  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaagaga 345  Q
    ||||||| |||||||||||||||||||||||||| ||||| |||||||||||| ||  ||||||||||||| | | |||| |||||||||||||    
T  10683946 gtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgctcttttgaaggtaaccttaagaga 10684039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 53 - 397
Target Start/End: Complemental strand, 35745970 - 35745626
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||| ||||||||||||| ||||||| | |||||| |  |||||||||||||   | | | | ||||||||||||||  ||| ||    
T  35745970 ttggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcg-gagatgccgtgagccaagtttgttggaagc 35745872  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
     ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  35745871 aaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctatgataaggactggtcaacctggggaccgttgcagatc 35745772  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaagagagcttaa 351  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||| | | ||||||||||||||||||||||    
T  35745771 gtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttggagataaccttaagagagcttaa 35745672  T
Q  352 gagagaaaaatttggaggtcagaga-ggggatcctatggggtgtgtt 397  Q
    ||||| |||| |||||| ||| ||| ||||||||| |||||||||||    
T  35745671 gagag-aaaacttggagatcaaagatggggatcctttggggtgtgtt 35745626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 53 - 346
Target Start/End: Original strand, 25327672 - 25327965
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc--gtggtacgtgagccaagtttgcaggatg 150  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||||||  ||||   |||||| | |||||||||| |    
T  25327672 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcttcgtggcacgatttcaagtggct-gtgagcta-gtttgcaggacg 25327769  T
Q  151 ccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagat 250  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||| ||| ||||||||| |    
T  25327770 ccaaatcatggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtcaaccttgggtccgttgcagct 25327869  T
Q  251 cgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaagagag 346  Q
    |||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| | |||||  | ||||||||||    
T  25327870 cgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttgaagaagaacttaagagag 25327965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 53 - 324
Target Start/End: Complemental strand, 6311927 - 6311656
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||  |||  |||||| | ||||||||||| ||    
T  6311927 ttggcttcaaatttgtggtctggaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcaaggtgccgtgag-ctagtttgcaggacgc 6311829  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||| |||||||| ||| | | |||| |||    
T  6311828 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactaataaggacttgtcaaccttgggtcagatgcaaatc 6311729  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttt 324  Q
    ||||||| ||   ||||||||||||||| |||||||||| | | |||||||||||||||||||||||||||||    
T  6311728 gtgacacgattgtgggaaatcgtggcacaatttcttcagaggaagactagtatatattgtgttcttgtgcttt 6311656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 53 - 324
Target Start/End: Original strand, 18852635 - 18852905
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||  |||  |||||| | ||||||||||| ||    
T  18852635 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgatacgattttggcatcgtgacacgatttcaaggtgccgtgag-ctagtttgcaggacgc 18852733  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtca-acctggggaccgttgcagat 250  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||| ||| | |  ||||||    
T  18852734 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtcataccttgggtcagacgcagat 18852833  T
Q  251 cgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttt 324  Q
    |||||||| || |  |||||||||||||||||| |||||| | | |||||||||||||||||||||||||||||    
T  18852834 cgtgacacgattt--ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttt 18852905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 53 - 324
Target Start/End: Original strand, 18870029 - 18870299
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggta-cgtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  | |  ||||||| | |||||||||| ||    
T  18870029 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagatgtcgtgagcta-gtttgcaggacgc 18870127  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtca-acctggggaccgttgcagat 250  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||| |||| ||| | |  ||||||    
T  18870128 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactaataaggactggtcataccttgggtcagacgcagat 18870227  T
Q  251 cgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttt 324  Q
    |||||||| || |  | |||||||||||||||| |||||| | | |||||||||||||||||||||||||||||    
T  18870228 cgtgacacgattt--gaaaatcgtggcacgattgcttcagagaaagactagtatatattgtgttcttgtgcttt 18870299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 53 - 320
Target Start/End: Complemental strand, 30656274 - 30656008
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||  |||||| | ||||||||||| ||    
T  30656274 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgag-ctagtttgcaggacgc 30656176  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc-aacctggggaccgttgcagat 250  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||  ||||||||||||||| ||||| ||| | |  ||| ||    
T  30656175 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcaaaccttgggtcagacgcaaat 30656076  T
Q  251 cgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtg 320  Q
    |||||||| ||||  |||||||||||||||||| |||||| | | |||||||||||||||||||||||||    
T  30656075 cgtgacacgatct--ggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtg 30656008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 53 - 323
Target Start/End: Original strand, 4759542 - 4759811
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| | |||||| | |||||||||| ||    
T  4759542 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttgacatcgtgacacgatttcgaggtgccgtgagcta-gtttgcaggacgc 4759640  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtca-acctggggaccgttgcagat 250  Q
    |||||| |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||  |||||||||||||||| |||| || || |  ||| ||    
T  4759641 caaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtatccttgataaggactggtcataccttggaacggacgcaaat 4759740  T
Q  251 cgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctt 323  Q
    |||||||| ||||  |||||||||| |||||||||||||| | | ||||||||||||||||||||||||||||    
T  4759741 cgtgacacgatct--ggaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgctt 4759811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 57 - 324
Target Start/End: Original strand, 7289439 - 7289707
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggta--cgtgagccaagtttgcaggatgccaa 154  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||  || |  | ||||| | |||||||||| |||||    
T  7289439 cttcaaatttgtggtctggaagaacagagaaatagtgacacgattttggcatcgtgacacgatttcaagggagccatgagcta-gtttgcaggacgccaa 7289537  T
Q  155 atcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtg 254  Q
    ||| || ||||||||||| ||||||||||| |||||||||||||||| |||||||||| |||||||||||| ||| |||| ||  | | |||| ||||||    
T  7289538 atcgtgacacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggacttgtctaccttggatcagatgcaaatcgtg 7289637  T
Q  255 acacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttt 324  Q
    |||| |||| |||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||    
T  7289638 acacgatcttgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttt 7289707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 53 - 290
Target Start/End: Complemental strand, 36980006 - 36979770
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||| | |||||||||| ||    
T  36980006 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagcta-gtttgcaggacgc 36979908  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtca-acctggggaccgttgcagat 250  Q
    |||||| |||||||||||||| ||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||| |||| |||      ||| ||    
T  36979907 caaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataaggactggtcataccttgggttgtacgcaaat 36979808  T
Q  251 cgtgacacaatctagggaaatcgtggcacgatttcttcag 290  Q
    |||||||| ||||  |||||||||||||||||| ||||||    
T  36979807 cgtgacacgatct--ggaaatcgtggcacgattgcttcag 36979770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 53 - 230
Target Start/End: Original strand, 33037295 - 33037472
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||| | |||||||||| ||    
T  33037295 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagcta-gtttgcaggacgc 33037393  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtca 230  Q
    |||||| || ||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||    
T  33037394 caaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactggtca 33037472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 138 - 321
Target Start/End: Original strand, 10688692 - 10688875
Alignment:
Q  138 agtttgcaggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggg 237  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||| |||||||| ||    
T  10688692 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactaataaggacttgtcaaccttgg 10688791  T
Q  238 gaccgttgcagatcgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgc 321  Q
    | | | |||| |||||||||| ||   ||||||||||||||| |||||||||| | | ||||||||||||||||||||||||||    
T  10688792 gtcagatgcaaatcgtgacacgattgtgggaaatcgtggcacaatttcttcagaggaagactagtatatattgtgttcttgtgc 10688875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 51 - 324
Target Start/End: Original strand, 1261421 - 1261695
Alignment:
Q  51 atttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggat 149  Q
    |||||| ||||||||| |||| |||||||||| |||||||| ||||||| ||||||||||||||||||||||||| | | |||||| | ||||||||| |    
T  1261421 atttggtttcaaatttgtggtttggaagaacacagaaatcgcgacacgaatttggcatcgtgacacgatttcgtgatgccgtgagcta-gtttgcagggt 1261519  T
Q  150 gccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtca-acctggggac---cgttg 245  Q
    |||||||| || ||||||||||||||||||||||| ||||   ||||||||| ||||||||||  |||||||||||||||| |||| |||||   ||||     
T  1261520 gccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggacatacgtt- 1261618  T
Q  246 cagatcgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttt 324  Q
    || |||||||||| ||||  |||||||||| ||||||||  |||| | | | ||||||| ||  |||||||||||||||    
T  1261619 caaatcgtgacacgatct--ggaaatcgtgacacgattttatcagaggaaggctagtatttaaagtgttcttgtgcttt 1261695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 50 - 229
Target Start/End: Original strand, 2627324 - 2627503
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtg-gtacgtgagccaagtttgcagga 148  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||  | |||||| |  ||||||| |     
T  2627324 gatttggcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgattccgtgag-ctggtttgcatgg 2627422  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    ||||||||| || |||||| |||||||||||||||| ||||   ||||||||| ||||||| ||  ||||||||| |||||    
T  2627423 tgccaaatcgtgacacgattttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggattggtc 2627503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 57 - 229
Target Start/End: Original strand, 3439100 - 3439271
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgccaaa 155  Q
    |||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| |||  |||||| | || ||||||| ||| |||    
T  3439100 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgag-ctaggttgcagggtgcaaaa 3439198  T
Q  156 tcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    || || |||||| |||||||||||||||| |||   |||||||||| ||||||||||  |||||||||||||||    
T  3439199 tcgtgacacgat-ttgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 3439271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 57 - 229
Target Start/End: Complemental strand, 26288504 - 26288332
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgccaaa 155  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||| |  |||||| |  ||||||||| |||||||    
T  26288504 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgag-ctggtttgcagggtgccaaa 26288406  T
Q  156 tcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    || || ||| |||||||||||||||||||  |||   ||||||||| ||||||| ||  |||||||||||||||    
T  26288405 tcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtc 26288332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 57 - 229
Target Start/End: Complemental strand, 26301761 - 26301589
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgccaaa 155  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||| |  |||||| |  ||||||||| |||||||    
T  26301761 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgag-ctggtttgcagggtgccaaa 26301663  T
Q  156 tcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    || || ||| |||||||||||||||||||  |||   ||||||||| ||||||| ||  |||||||||||||||    
T  26301662 tcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtc 26301589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 57 - 229
Target Start/End: Complemental strand, 26313755 - 26313583
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgccaaa 155  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||| |  |||||| |  ||||||||| |||||||    
T  26313755 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacatgattttgtgatgccgtgag-ctggtttgcagggtgccaaa 26313657  T
Q  156 tcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    || || ||| |||||||||||||||||||  |||   ||||||||| ||||||| ||  |||||||||||||||    
T  26313656 tcgtgacacaatcttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtc 26313583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 50 - 167
Target Start/End: Original strand, 31042914 - 31043031
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    |||||| |||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||  |||||| |  |||||||||     
T  31042914 gatttgacttcaaatttgtggtctggaagaatagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgag-ctggtttgcaggg 31043012  T
Q  149 tgccaaatcatggcacgat 167  Q
    ||||||||| || ||||||    
T  31043013 tgccaaatcgtgacacgat 31043031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 7412945 - 7412787
Alignment:
Q  51 atttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggat 149  Q
    ||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||  |  |||||| |  ||||||||| |    
T  7412945 atttgacttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattctgtaatgccgtgag-ctggtttgcagggt 7412847  T
Q  150 gccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagt 209  Q
    | |||||| ||| || || ||| |||||||||||| ||||   |||||||||||||||||    
T  7412846 gtcaaatcgtggtacaattttgtgaaatcgtgacacgattttcaaacttgctggttaagt 7412787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 57 - 229
Target Start/End: Complemental strand, 42575897 - 42575724
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgccaaat 156  Q
    |||||||||| |||| ||||||||||| ||||||||||||||||||||| |||| ||||||||||||     ||||||  | | |||||||    |||||    
T  42575897 cttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttcggatgccgtgagttagggttgcaggggtgcaaat 42575798  T
Q  157 catggcacgatcttggg-aaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    | || |||||| ||||| ||||||||||| |||  ||||||||||| ||||||||||  |||||||||||||||    
T  42575797 cgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 42575724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 57 - 228
Target Start/End: Original strand, 15290155 - 15290327
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgccaaat 156  Q
    |||||||||| |||| ||||||||||| ||||||||||||||||||||| || | ||||||||||||     ||||||  | | |||||||    |||||    
T  15290155 cttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggattgcgacacgatttcggatgccgtgagttagggttgcaggggtgcaaat 15290254  T
Q  157 catggcacgatcttggg-aaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggt 228  Q
    | || |||||| ||||| ||||||||||| |||  ||||||||||| ||||||||||  ||||||||||||||    
T  15290255 cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggt 15290327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 57 - 228
Target Start/End: Original strand, 15470524 - 15470696
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgccaaat 156  Q
    |||||||||| |||| ||||||||||| ||||||||||||||||||||| || | ||||||||||||     ||||||  | | |||||||    |||||    
T  15470524 cttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggattgcgacacgatttcggatgccgtgagttagggttgcaggggtgcaaat 15470623  T
Q  157 catggcacgatcttggg-aaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggt 228  Q
    | || |||||| ||||| ||||||||||| |||  ||||||||||| ||||||||||  ||||||||||||||    
T  15470624 cgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggt 15470696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 10688626 - 10688675
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  10688626 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 10688675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 5701960 - 5702009
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  5701960 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 5702009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 25689573 - 25689618
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||| |||||||||||||||||||||||||||||||||||    
T  25689573 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 25689618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 52 - 102
Target Start/End: Complemental strand, 4456625 - 4456575
Alignment:
Q  52 tttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    ||||||||||||||| |||| |||||||||| |||||||||||||||||||    
T  4456625 tttggcttcaaatttgtggtttggaagaacaaagaaatcgtgacacgattt 4456575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 25689604 - 25689725
Alignment:
Q  107 atcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggtta 206  Q
    ||||||||||||||||| |   ||||||| | ||| ||||| ||| ||||| |||||||||  ||||||||||| ||| |||   |||||||||| ||||    
T  25689604 atcgtgacacgatttcgggtgccgtgagctaggtt-gcagggtgcaaaatcgtggcacgattgtgggaaatcgtcacacgatcgtgaaacttgctcgtta 25689702  T
Q  207 agtatcactgataaggactggtc 229  Q
    ||||||  |||||||||||||||    
T  25689703 agtatccttgataaggactggtc 25689725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 52 - 103
Target Start/End: Original strand, 19175232 - 19175283
Alignment:
Q  52 tttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgatttt 103  Q
    |||||||||||||||  ||| |||||||||||| |||||||| |||||||||    
T  19175232 tttggcttcaaatttgcggtttggaagaacagaaaaatcgtgtcacgatttt 19175283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 121
Target Start/End: Original strand, 11383406 - 11383440
Alignment:
Q  87 aatcgtgacacgattttggcatcgtgacacgattt 121  Q
    |||||||||||||||||||||||||| ||||||||    
T  11383406 aatcgtgacacgattttggcatcgtggcacgattt 11383440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 23799100 - 23799149
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||| ||||||||| |||| || ||||||||||||||||| |||||||||    
T  23799100 ttggtttcaaatttgtggtttgaaagaacagagaaatcgtaacacgattt 23799149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 324
Target Start/End: Original strand, 33037518 - 33037546
Alignment:
Q  296 gactagtatatattgtgttcttgtgcttt 324  Q
    |||||||||||||||||||||||||||||    
T  33037518 gactagtatatattgtgttcttgtgcttt 33037546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 233; Significance: 1e-128; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 233; E-Value: 1e-128
Query Start/End: Original strand, 53 - 396
Target Start/End: Complemental strand, 6439075 - 6438733
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||  | ||| | ||||||||||||||| ||||||    
T  6439075 ttggcttcaaatttatggtctggaagaacatagaaatcgtgacacgattttggaatcgtgacacgattg-gaggtgccgtgagccaagtttgctggatgc 6438977  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
      |||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  6438976 ataatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctagttaagtatcactgataaggactggtcaacctgggaaccgttgcagatc 6438877  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaagagagcttaa 351  Q
    ||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||    
T  6438876 gtgacacgatctagggaaatcgtgacacgatttcttcagggaaggactagtatatattgtgttcttgtgcttttttgaagacaaccttaagagagcttaa 6438777  T
Q  352 gagagaaaaatttggaggtcagagaggggatcctatggggtgtgt 396  Q
    ||||| |||  |||||| ||| |||||||||||||||||||||||    
T  6438776 gagag-aaatcttggagatcaaagaggggatcctatggggtgtgt 6438733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 53 - 324
Target Start/End: Original strand, 14741934 - 14742205
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc--gtggtacgtgagccaagtttgcaggatg 150  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||| | |||||||||| |    
T  14741934 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggt-cgtgagcta-gtttgcaggacg 14742031  T
Q  151 ccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagat 250  Q
    ||||||| |||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||| ||| |||||||||||    
T  14742032 ccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtcaaccttgggtccgttgcagat 14742131  T
Q  251 cgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttt 324  Q
    |||||||| ||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  14742132 cgtgacacgatctaaggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttt 14742205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 53 - 397
Target Start/End: Complemental strand, 16839322 - 16838979
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||| ||||||||||||| ||||||| | |||||| |  |||||||||||||   | | | | ||||||||||||||| ||| ||    
T  16839322 ttggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcg-gagatgccgtgagccaagtttgctggaagc 16839224  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
     ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  16839223 aaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaaccttgggaccgttgcagatc 16839124  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaagagagcttaa 351  Q
    ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||| | | ||| |||||| |||||||||||    
T  16839123 gtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcttttttggagagaaccttgagagagcttaa 16839024  T
Q  352 gagagaaaaatttggaggtcagagaggggatcctatggggtgtgtt 397  Q
    ||||| |||| |||||| ||| ||| |||||||| |||||||||||    
T  16839023 gagag-aaaacttggagatcaaagatgggatcctttggggtgtgtt 16838979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 129 - 396
Target Start/End: Original strand, 28155155 - 28155422
Alignment:
Q  129 cgtgagccaagtttgcaggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggt 228  Q
    ||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  28155155 cgtgagccaagtttgcagggtgcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactggt 28155254  T
Q  229 caacctggggaccgttgcagatcgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtag 328  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||| | |    
T  28155255 caacctggggaccgttgcagatcgtgacacgatctagggaaatcgtgacacgatttcttcaggggaggactagtatatattgtgttcttgtgcttttttg 28155354  T
Q  329 -aagataaccttaagagagcttaagagagaaaaatttggaggtcagagaggggatcctatggggtgtgt 396  Q
     || | |||||||||||| |||||||||| |||| |||||| ||| |||||||||||||||||||||||    
T  28155355 aaaaaaaaccttaagagaacttaagagag-aaaacttggagatcaaagaggggatcctatggggtgtgt 28155422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 53 - 349
Target Start/End: Original strand, 22010197 - 22010493
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc--gtggtacgtgagccaagtttgcaggatg 150  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||  ||| ||  | |||||||||| |    
T  22010197 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggc-cgtaagtta-gtttgcaggacg 22010294  T
Q  151 ccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagat 250  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||| |||| ||| |||||||| ||    
T  22010295 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttgggtccgttgcaaat 22010394  T
Q  251 cgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaagagagctt 349  Q
    |||||||| ||||||||||||||||||||||||||||||| |   ||||||||||||||||||||||||||||| | |||||  | |||||||||||||    
T  22010395 cgtgacacgatctagggaaatcgtggcacgatttcttcagagggagactagtatatattgtgttcttgtgcttttttgaagaagaacttaagagagctt 22010493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 53 - 397
Target Start/End: Complemental strand, 6005998 - 6005652
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacg-tgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||| ||||| ||||||| ||||||| | |||||| |  |||||||||||||   | | | |  |||||||||||||| ||| ||    
T  6005998 ttggcttcaaatttgtggtttggaaaaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcg-gagatgccatgagccaagtttgctggaagc 6005900  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
     ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6005899 aaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagatc 6005800  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgta--gaagataaccttaagagagctt 349  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||| |   ||| | ||||||||||||||||    
T  6005799 gtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgctttttttggaaaaaaaccttaagagagctt 6005700  T
Q  350 aagagagaaaaatttggaggtcagaga-ggggatcctatggggtgtgtt 397  Q
    ||||||| |||| |||||| ||| ||| ||||||||| |||||||||||    
T  6005699 aagagag-aaaacttggagatcaaagatggggatcctttggggtgtgtt 6005652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 53 - 343
Target Start/End: Original strand, 33329941 - 33330231
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||| ||||||||||||| ||||||| | |||||| |  |||||||||||||   | | | | ||||||||||||||| ||| ||    
T  33329941 ttggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcg-gagatgccgtgagccaagtttgctggaagc 33330039  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
     ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33330040 aaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagatc 33330139  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaaga 343  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||| | ||||| ||||||||||    
T  33330140 gtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttgaagacaaccttaaga 33330231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 53 - 324
Target Start/End: Complemental strand, 11857559 - 11857289
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc--gtggtacgtgagccaagtttgcaggatg 150  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||  ||||||| | |||||||||| |    
T  11857559 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggc-cgtgagcta-gtttgcaggacg 11857462  T
Q  151 ccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagat 250  Q
    ||||||| |||||||||||||||||||||||||| |||| ||||||||||| |||||||| |||||||||||||| |||||||| ||| |||||||| ||    
T  11857461 ccaaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtaacactgataaggacttgtcaaccttgggtccgttgcaaat 11857362  T
Q  251 cgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttt 324  Q
    |||||||| || | |||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||    
T  11857361 cgtgacacgat-ttgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttt 11857289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 45 - 397
Target Start/End: Complemental strand, 5344064 - 5343712
Alignment:
Q  45 tgttggatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgc 144  Q
    ||||||| |||||||||||||| |||| ||| ||||||||||||||||| |||||||| | ||||||||||||||   |  | | ||||||||||| | |    
T  5344064 tgttggaattggcttcaaatttgtggtttgggagaacagagaaatcgtgtcacgatttggtcatcgtgacacgatcagggaggaagtgagccaagtcttc 5343965  T
Q  145 aggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgtt 244  Q
     | | || ||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  5343964 tgaaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacttggggaccgtt 5343865  T
Q  245 gcagatcgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaa-gataaccttaaga 343  Q
    ||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||   | ||| | ||||||| |||    
T  5343864 gcatatcgtgacacgatctagggaaatcgtggcacgatttcttcagggctggactagtatataaagtgttcttgtgctcatttgaaggttaaccttgaga 5343765  T
Q  344 gagcttaagagagaaaaatttggaggtcagagaggggatcctatggggtgtgtt 397  Q
    || |||||||||| |||| |||||  ||| ||| |||||||| |||||||||||    
T  5343764 gaacttaagagag-aaaacttggatatcaaagatgggatcctttggggtgtgtt 5343712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 53 - 343
Target Start/End: Original strand, 33335438 - 33335728
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||| ||||||||||||| ||||||  | |||||| |  |||||||||||||   | | | | ||||||||||||||| ||| ||    
T  33335438 ttggcttcaaatttgtggtttggaagaacagaggaatcgtttcgcgatttggcaatcgtgacacgatcg-gagatgccgtgagccaagtttgctggaagc 33335536  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
     ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33335537 aaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagatc 33335636  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaaga 343  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||  |||||| |||||||| | ||||| ||||||||||    
T  33335637 gtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcatgtgcttttttgaagacaaccttaaga 33335728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 138 - 324
Target Start/End: Original strand, 14737159 - 14737345
Alignment:
Q  138 agtttgcaggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggg 237  Q
    ||||||||||| |||||||| |||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||| ||    
T  14737159 agtttgcaggacgccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtcaaccttgg 14737258  T
Q  238 gaccgttgcagatcgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttt 324  Q
    | ||||||||||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  14737259 gtccgttgcagatcgtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttt 14737345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 53 - 212
Target Start/End: Original strand, 30125026 - 30125185
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||| | ||||||||||| ||    
T  30125026 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgag-ctagtttgcaggacgc 30125124  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatc 212  Q
    |||||| ||||||||| |||||||||||||||| |||||||||||||||| ||||||||||    
T  30125125 caaatcgtggcacgattttgggaaatcgtgacacgattcagaaacttgctcgttaagtatc 30125185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 53 - 283
Target Start/End: Original strand, 5674238 - 5674467
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||| ||||| ||| | | ||||||   ||||||||| |||    
T  5674238 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgaatttggcatcgtgacatgattttgtgatgccgtgagctg-gtttgcagggtgc 5674336  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtca-acctggggaccgttgcagat 250  Q
    |||||| || ||| ||||||||||||||||||| ||||  |||||||||| ||||||||||  |||||||||||||||| |||| |||||    ||| ||    
T  5674337 caaatcgtgacacaatcttgggaaatcgtgacacgattttgaaacttgctcgttaagtatccgtgataaggactggtcataccttgggacgtacgcaaat 5674436  T
Q  251 cgtgacacaatctagggaaatcgtggcacgatt 283  Q
    |||||||| ||||  |||||||||| |||||||    
T  5674437 cgtgacacgatct--ggaaatcgtgacacgatt 5674467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 40 - 229
Target Start/End: Complemental strand, 22709650 - 22709460
Alignment:
Q  40 atatgtgttg-gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagcca 137  Q
    |||||||||| ||||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||| ||||||||||||| ||| |  | |||| |     
T  22709650 atatgtgttgagatttggcttcaaatttgtggtctggaagaacagagaaatcatgacacgaatttggcaacgtgacacgattttgtgatgccatgag-ct 22709552  T
Q  138 agtttgcaggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
     ||||||||| ||||||||| || ||||||||||||||||||||||| ||||   ||||||||| ||||||| ||  |||||||||||||||    
T  22709551 ggtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtttccatgataaggactggtc 22709460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 57 - 229
Target Start/End: Complemental strand, 16579089 - 16578917
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgccaaa 155  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||  |||||| | || ||||||| ||| |||    
T  16579089 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgag-ctaggttgcagggtgcaaaa 16578991  T
Q  156 tcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    || ||||||||| | || ||||||||||| |||   |||||||||| ||||||||||  |||||||||||||||    
T  16578990 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 16578917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 57 - 229
Target Start/End: Original strand, 16616291 - 16616463
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgccaaa 155  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||  |||||| | || ||||||| ||| |||    
T  16616291 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgag-ctaggttgcagggtgcaaaa 16616389  T
Q  156 tcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    || ||||||||| | || ||||||||||| |||   |||||||||| ||||||||||  |||||||||||||||    
T  16616390 tcgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 16616463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 50 - 209
Target Start/End: Complemental strand, 2172098 - 2171939
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    ||||||| ||||||||| |||||||||||||||||||||||| |||| || ||||||||||||||||||||||||| |  |||||| |  |||||||||     
T  2172098 gatttggtttcaaatttgtggtctggaagaacagagaaatcgggacatgaatttggcatcgtgacacgatttcgtgatgccgtgag-ctggtttgcaggg 2172000  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagt 209  Q
    ||||||||| || ||||||||||||||||||||||| ||||   ||||||||| |||||||    
T  2171999 tgccaaatcgtgacacgatcttgggaaatcgtgacacgattgtaaaacttgctcgttaagt 2171939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 50 - 284
Target Start/End: Original strand, 411691 - 411927
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    |||||| |||||||||| ||||||||||||| || ||||||||||||||| |||||||| ||||||| ||||||||||  |||||| | ||| ||||||     
T  411691 gatttgtcttcaaatttgtggtctggaagaatagggaaatcgtgacacgaatttggcattgtgacacaatttcgtggtgccgtgag-ctagtctgcaggg 411789  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcag-aaacttgctggttaagtatcactgataaggactggtca-acctggggaccgttgc 246  Q
    ||||||||| || ||||||  ||||||||||||||| ||||  | ||||||||| ||||||| ||  |||||||||||||||| |||| ||||| | |||    
T  411790 tgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttgggacggatgc 411889  T
Q  247 a--gatcgtgacacaatctagggaaatcgtggcacgattt 284  Q
    |   ||||||||||||||   |||||||||| ||||||||    
T  411890 accaatcgtgacacaatc--aggaaatcgtgacacgattt 411927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 52 - 229
Target Start/End: Original strand, 27647475 - 27647652
Alignment:
Q  52 tttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatg 150  Q
    |||| |||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||  |||||| | || ||||||| ||    
T  27647475 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgag-ctaggttgcagggtg 27647573  T
Q  151 ccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    | ||||| |||||||||  || |||||||||||| |||   |||||||||| ||||||||||  |||||  ||||||||    
T  27647574 caaaatcgtggcacgattgtgagaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgatattgactggtc 27647652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 107 - 230
Target Start/End: Complemental strand, 5266610 - 5266487
Alignment:
Q  107 atcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggtt 205  Q
    ||||||||||||||||| ||| | |||||| | |||||||||| |||||||| |||||||||||||||||||||||||| ||||||||||||||||  ||    
T  5266610 atcgtgacacgatttcgaggtgccgtgagcta-gtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcatt 5266512  T
Q  206 aagtatcactgataaggactggtca 230  Q
    |||||||  ||||||||||||||||    
T  5266511 aagtatccttgataaggactggtca 5266487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 57 - 229
Target Start/End: Complemental strand, 6136535 - 6136363
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgccaaat 156  Q
    |||||||||| |||| ||||||||||| ||||||||||||||||||||| |||| ||||||||||||     ||||||| | | |||||||     ||||    
T  6136535 cttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggaatcgagacacgatttcggatgccgtgagctagggttgcaggggtgaaaat 6136436  T
Q  157 catggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    | |||||||||  ||||||||||||||| ||| |||||||||||| ||||||||||  |||||||||||||||    
T  6136435 cgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 6136363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 50 - 230
Target Start/End: Complemental strand, 3073337 - 3073157
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    |||||| |||||||||| ||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||| |  |||||| |  || | ||||     
T  3073337 gatttgtcttcaaatttgtggtctggaagaacaggaaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgag-ctggtctacaggg 3073239  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtca 230  Q
    ||||||||| || ||||||  | ||||||||||||| ||||   ||||||||| ||||||| ||  ||||||||||||||||    
T  3073238 tgccaaatcgtgacacgattgttggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtca 3073157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 57 - 229
Target Start/End: Original strand, 16554466 - 16554638
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgccaaa 155  Q
    |||||||||| |||||||||||||||| |||||||||||| |||||||| ||||||||||||||||| |||  |||||| | || || |||| ||| |||    
T  16554466 cttcaaatttgtggtctggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggggtgccgtgag-ctaggttacagggtgcaaaa 16554564  T
Q  156 tcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    |  ||||||||| | || ||||||||||| |||   |||||||||| ||||||||||  |||||||||||||||    
T  16554565 ttgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 16554638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 57 - 229
Target Start/End: Original strand, 16631022 - 16631194
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgccaaa 155  Q
    |||||||||| |||||||||||||||| |||||||||||| |||||||| ||||||||||||||||| |||  |||||| | || || |||| ||| |||    
T  16631022 cttcaaatttgtggtctggaagaacagggaaatcgtgacatgattttggtatcgtgacacgatttcggggtgccgtgag-ctaggttacagggtgcaaaa 16631120  T
Q  156 tcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    |  ||||||||| | || ||||||||||| |||   |||||||||| ||||||||||  |||||||||||||||    
T  16631121 ttgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 16631194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 57 - 229
Target Start/End: Original strand, 6026846 - 6027018
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgccaaat 156  Q
    |||||||||| |||| |||||||| || |||||||||||||||||  ||||| |||||||||||||| ||| || |||| | | |||||||    |||||    
T  6026846 cttcaaatttgtggtttggaagaatagggaaatcgtgacacgattgcggcattgtgacacgatttcgaggtgcgagagctagggttgcaggggtgcaaat 6026945  T
Q  157 catggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    | ||||||||| | || ||||||||||| ||| |||||||||||| ||||||||||  |||||||||| ||||    
T  6026946 cgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggaccggtc 6027018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 57 - 229
Target Start/End: Original strand, 25420809 - 25420981
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgccaaat 156  Q
    |||||||||| |||||||||||||||| ||||||||||||| ||||||| | |||||||||||||||     ||||||| | | |||||||    |||||    
T  25420809 cttcaaatttgtggtctggaagaacagggaaatcgtgacacaattttgggaccgtgacacgatttcggatgccgtgagctagggttgcaggggtgcaaat 25420908  T
Q  157 catggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    | ||||||||| | || ||||||||||| |||   |||||||||| ||||||||||  |||||||||||||||    
T  25420909 cgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 25420981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 23896950 - 23896792
Alignment:
Q  51 atttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggta-cgtgagccaagtttgcaggat 149  Q
    ||||| |||||||||| |||| || ||||||||| |||||||||||||||||||||||||||||||||||| ||  || ||||||    ||||||||| |    
T  23896950 atttgccttcaaatttgtggtttgaaagaacagaaaaatcgtgacacgattttggcatcgtgacacgattttgtaatatcgtgag-ttggtttgcagggt 23896852  T
Q  150 gccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagt 209  Q
    | |||||| ||| ||||| ||| |||||||||||| ||||   |||||||||||||||||    
T  23896851 gtcaaatcgtggtacgattttgtgaaatcgtgacacgatttttaaacttgctggttaagt 23896792  T

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Target: chr6; HSP #28
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 52 - 229
Target Start/End: Original strand, 34166673 - 34166851
Alignment:
Q  52 tttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgc 151  Q
    |||| |||||||||| |||| ||||||||||| ||||||||||||||||||||| |||||||| ||||||||     ||||||  | | |||||||        
T  34166673 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtg 34166772  T
Q  152 caaatcatggcacgatcttggg-aaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    |||||| || |||||| ||||| ||||||||||| |||  ||||||||||| ||||||||||  |||||||||||||||    
T  34166773 caaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 34166851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 57 - 229
Target Start/End: Complemental strand, 33342676 - 33342503
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgccaaat 156  Q
    |||||||||| |||| ||||||||||  ||||||||||||||||||||| |||| ||| ||||||||     ||||||| | | |||||||    |||||    
T  33342676 cttcaaatttgtggtttggaagaacatggaaatcgtgacacgattttgggatcgcgacgcgatttcggatgccgtgagctagggttgcaggggtgcaaat 33342577  T
Q  157 catggcacgatct-tgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    | ||||||||| | ||||||||||||||| |||  ||||||||||| ||||||||||  |||||||||||||||    
T  33342576 cgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 33342503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 52 - 229
Target Start/End: Original strand, 13150856 - 13151034
Alignment:
Q  52 tttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgc 151  Q
    |||| |||||||||| |||  ||||||||||| ||||||||||||||||||||| |||||||| ||||||||     ||||||  | | |||||||        
T  13150856 tttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtg 13150955  T
Q  152 caaatcatggcacgatcttggg-aaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    |||||| || |||||| ||||| ||||||||||| |||  ||||||||||| ||||||||||  |||||||||||||||    
T  13150956 caaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 13151034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 6097980 - 6097905
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtg 125  Q
    |||||| |||||||||| |||| ||||||||||| |||||| |||||||| |||||||||||||||||||||||||    
T  6097980 gatttgtcttcaaatttgtggtttggaagaacagggaaatcctgacacgaatttggcatcgtgacacgatttcgtg 6097905  T

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Target: chr6; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 50 - 121
Target Start/End: Original strand, 26253595 - 26253666
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 121  Q
    |||||| |||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||| |||||    
T  26253595 gatttgtcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacaagattt 26253666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 52 - 229
Target Start/End: Original strand, 34164451 - 34164629
Alignment:
Q  52 tttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgc 151  Q
    |||| |||||||||| |||  ||||||||||| ||||||||||||||||| ||| |||||||| ||||||||     ||||||  | | |||||||        
T  34164451 tttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattctgggatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtg 34164550  T
Q  152 caaatcatggcacgatcttggg-aaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    |||||| || |||||| ||||| ||||||||||| |||  ||||||||||| ||||||||||  |||||||||||||||    
T  34164551 caaatcgtgtcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 34164629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 5266645 - 5266596
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  5266645 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 5266596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 14737093 - 14737142
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  14737093 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 14737142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 51 - 209
Target Start/End: Original strand, 5756958 - 5757116
Alignment:
Q  51 atttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggat 149  Q
    ||||||||| ||||||||||| |  ||||| |||||||| ||||||||||| |||||||||||||| |||| ||  |  ||||||    ||||||||| |    
T  5756958 atttggctttaaatttatggtttaaaagaatagagaaattgtgacacgattgtggcatcgtgacacaattttgtaatgtcgtgag-ttggtttgcagggt 5757056  T
Q  150 gccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagt 209  Q
    | |||||| ||| ||||| ||| |||||||||||| ||||   |||||||||||||||||    
T  5757057 gtcaaatcgtggtacgattttgtgaaatcgtgacacgattttcaaacttgctggttaagt 5757116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 45 - 100
Target Start/End: Original strand, 28155090 - 28155145
Alignment:
Q  45 tgttggatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgat 100  Q
    ||||||| |||||||||||||| |||||||||||||||||| ||||||||||||||    
T  28155090 tgttggaattggcttcaaatttgtggtctggaagaacagagcaatcgtgacacgat 28155145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 52 - 123
Target Start/End: Original strand, 34151835 - 34151906
Alignment:
Q  52 tttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcg 123  Q
    |||| |||||||||| |||  ||||||||||| ||||||||||||||||| ||| |||||||| ||||||||    
T  34151835 tttgtcttcaaatttgtggcttggaagaacagggaaatcgtgacacgattctgggatcgtgacgcgatttcg 34151906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 5016977 - 5017026
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| |||| |||||||||||| |||||||||||||||||    
T  5016977 ttggcttcaaatttgtggtttggaagaacagaaaaatcgtgacacgattt 5017026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 31085954 - 31086003
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| |||| | ||||||||||||||||||||||||||||    
T  31085954 ttggcttcaaatttgtggtttagaagaacagagaaatcgtgacacgattt 31086003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 16652728 - 16652773
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||| ||||||| |||||||| ||||||||||||||||||    
T  16652728 cttcaaatttgtggtctgaaagaacagggaaatcgtgacacgattt 16652773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 44 - 102
Target Start/End: Original strand, 5571748 - 5571806
Alignment:
Q  44 gtgttggatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||| ||||| |||||||||| || | ||| |||| |||||||||||||||||||||    
T  5571748 gtgttgaatttgtcttcaaatttgtgttttgggagaatagagaaatcgtgacacgattt 5571806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 24714988 - 24714938
Alignment:
Q  53 ttggcttcaaattta-tggtctggaagaacagagaaatcgtgacacgattt 102  Q
    ||||||||||||||  |||| ||||| ||||||||||||||||||||||||    
T  24714988 ttggcttcaaattttgtggtttggaaaaacagagaaatcgtgacacgattt 24714938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 102
Target Start/End: Complemental strand, 603801 - 603772
Alignment:
Q  73 tggaagaacagagaaatcgtgacacgattt 102  Q
    ||||||||||||||||||||||||||||||    
T  603801 tggaagaacagagaaatcgtgacacgattt 603772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 18234699 - 18234650
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    ||||||| |||||| |||| |||||||||||||||||  |||||||||||    
T  18234699 ttggctttaaatttgtggtttggaagaacagagaaatgttgacacgattt 18234650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 121
Target Start/End: Complemental strand, 5413982 - 5413942
Alignment:
Q  81 cagagaaatcgtgacacgattttggcatcgtgacacgattt 121  Q
    |||||||||||||||||||||| |  |||||||||||||||    
T  5413982 cagagaaatcgtgacacgatttggtaatcgtgacacgattt 5413942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 226; Significance: 1e-124; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 45 - 397
Target Start/End: Original strand, 28807076 - 28807427
Alignment:
Q  45 tgttggatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttg 143  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||| ||||||||||  ||||||||||||| | | | | | ||||||||||||||    
T  28807076 tgttggaattggcttcaaatttatggtctggaagaacagaggaatcgtgtcacgattttgcaatcgtgacacgatct-gagatgccgtgagccaagtttg 28807174  T
Q  144 caggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgt 243  Q
    |||| ||| ||||| |||||||||||||||||||||||||| ||| |||||||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  28807175 cagggtgcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgttggttaagtatctctgataaggactggtcaacctggggaccgt 28807274  T
Q  244 tgcagatcgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaaga 343  Q
    ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||| ||||||||||    
T  28807275 tgcagatcgtgacacgatctagggaactcgtggcacgatttcttcagggcaggactagtatatattatgttcttgtgcttttttgaagagaaccttaaga 28807374  T
Q  344 gagcttaagagagaaaaatttggaggtcagagaggggatcctatggggtgtgtt 397  Q
    ||||||||||||| |||| |||||| ||| |||||||||||| |||||||||||    
T  28807375 gagcttaagagag-aaaacttggagatcaaagaggggatcctttggggtgtgtt 28807427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 45 - 397
Target Start/End: Original strand, 37560947 - 37561298
Alignment:
Q  45 tgttggatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttg 143  Q
    ||||| |||||||||||||||| |||||||||||||||||| ||||||||||||||||    ||||||||||||| | | | | | |||||||||||||     
T  37560947 tgttgaatttggcttcaaatttgtggtctggaagaacagagtaatcgtgacacgatttgataatcgtgacacgatct-gagatgccgtgagccaagtttt 37561045  T
Q  144 caggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgt 243  Q
     | |  | |||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  37561046 gatggaggcaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactggttaacctggggaccgt 37561145  T
Q  244 tgcagatcgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaaga 343  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||    
T  37561146 tgcagatcgtgacatgatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttttttgaagagaaccttaaga 37561245  T
Q  344 gagcttaagagagaaaaatttggaggtcagagaggggatcctatggggtgtgtt 397  Q
      ||||||||||| |||| |||||| ||| ||||||||||||||||||||||||    
T  37561246 tggcttaagagag-aaaacttggagatcaaagaggggatcctatggggtgtgtt 37561298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 53 - 397
Target Start/End: Complemental strand, 33791895 - 33791551
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||| ||||||||||||| ||||||| | |||||| |  |||||||||||||   | | | | ||||||||||||||| ||| ||    
T  33791895 ttggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcg-gagatgccgtgagccaagtttgctggaagc 33791797  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
     ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33791796 aaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagatc 33791697  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaagagagcttaa 351  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||| | | ||||||||||||||||||||||    
T  33791696 gtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttggagataaccttaagagagcttaa 33791597  T
Q  352 gagagaaaaatttggaggtcagaga-ggggatcctatggggtgtgtt 397  Q
    ||||| |||| |||||| ||| ||| ||||||||| |||||||||||    
T  33791596 gagag-aaaacttggagatcaaagatggggatcctttggggtgtgtt 33791551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 53 - 397
Target Start/End: Complemental strand, 2785954 - 2785610
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||| ||||||||||||| ||||||| | |||||| |  |||||||||||||   | | | | ||||||||||||||| ||| ||    
T  2785954 ttggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcg-gagatgccgtgagccaagtttgctggaagc 2785856  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
     ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  2785855 aaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggagcgttgcagatc 2785756  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaagagagcttaa 351  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||| | | ||||||||||||||||||||||    
T  2785755 gtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttggagataaccttaagagagcttaa 2785656  T
Q  352 gagagaaaaatttggaggtcagaga-ggggatcctatggggtgtgtt 397  Q
    ||||| |||| |||||| ||| ||| ||||||||| |||||||||||    
T  2785655 gagag-aaaacttggagatcaaagatggggatcctttggggtgtgtt 2785610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 53 - 397
Target Start/End: Complemental strand, 33768763 - 33768419
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||| ||||||||||||| ||||||| | |||||| |  |||||||||||||   | | | | ||||||||||||||| ||| ||    
T  33768763 ttggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcg-gagatgccgtgagccaagtttgctggaagc 33768665  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
     ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33768664 aaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagatc 33768565  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaagagagcttaa 351  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||  ||||||||||||||| | | ||||||||||||||||||||||    
T  33768564 gtgacacgatctagggaaatcgtggcacgatttcttcagggcatgactagtatttaaagtgttcttgtgcttttttggagataaccttaagagagcttaa 33768465  T
Q  352 gagagaaaaatttggaggtcagaga-ggggatcctatggggtgtgtt 397  Q
    ||||| |||| |||||| ||| ||| ||||||||| |||||||||||    
T  33768464 gagag-aaaacttggagatcaaagatggggatcctttggggtgtgtt 33768419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 53 - 349
Target Start/End: Complemental strand, 15045271 - 15044976
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| | || ||||||||||||||||||||||||||||||||| ||||||||||||||| | | | | |||||||| |||||||||| ||    
T  15045271 ttggcttcaaatttgtagtttggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattt-gagatgccgtgagcca-gtttgcaggacgc 15045174  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  15045173 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactggtcaacctggggtccgttgcagatc 15045074  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaagagagctt 349  Q
    ||||||| ||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| | |||||  | |||||||||||||    
T  15045073 gtgacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttgaagaagaacttaagagagctt 15044976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 45 - 397
Target Start/End: Original strand, 37556125 - 37556476
Alignment:
Q  45 tgttggatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttg 143  Q
    ||||| |||||||||||||||| |||||||||||||||||| |||||||||||||||| |  ||||||||||||| | | | | | |||||||||||||     
T  37556125 tgttgaatttggcttcaaatttgtggtctggaagaacagagtaatcgtgacacgatttggtaatcgtgacacgatct-gagatgccgtgagccaagtttt 37556223  T
Q  144 caggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgt 243  Q
     | |  | |||||| ||||||||||||||||||| |||||| |||  |||||||||||||||||||||| ||||||||||||||| |||| | |||||||    
T  37556224 gatggaggcaaatcgtggcacgatcttgggaaattgtgacacgatctagaaacttgctggttaagtatctctgataaggactggttaaccagaggaccgt 37556323  T
Q  244 tgcagatcgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaaga 343  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||    
T  37556324 tgcagatcgtgacacgatctagggaaatcatggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttttttgaagagaaccttaaga 37556423  T
Q  344 gagcttaagagagaaaaatttggaggtcagagaggggatcctatggggtgtgtt 397  Q
      ||||||||||| |||| |||||| ||| ||||||||||||||||||||||||    
T  37556424 tggcttaagagag-aaaacttggagatcaaagaggggatcctatggggtgtgtt 37556476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 53 - 397
Target Start/End: Original strand, 31396498 - 31396841
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc-gtggtacgtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||| ||| ||||||||| ||||||| |||||||| |  |||||||||||||    | || | |||||| |||||||| ||| ||    
T  31396498 ttggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagaggca-gtgagctaagtttgctggaagc 31396596  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
     ||||| || ||||||||||||||||||||||| |||||||| ||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  31396597 aaaatcgtgccacgatcttgggaaatcgtgacacgattcagacacttgttggttaagtttctctgataaggactggtcaacctggggaccgttgcagatc 31396696  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaagagagcttaa 351  Q
    ||||||| |||||||| ||||||| ||||||||||||||||||||||| |||| ||  ||||||||||||||| | ||||| |||||| |||||||||||    
T  31396697 gtgacacgatctagggtaatcgtgacacgatttcttcagggcaggacttgtatttaaagtgttcttgtgcttttttgaagacaaccttgagagagcttaa 31396796  T
Q  352 gagagaaaaatttggaggtcagagaggggatcctatggggtgtgtt 397  Q
    ||||| |||| |||||| ||| ||| |||||||| |||||||||||    
T  31396797 gagag-aaaacttggagatcaaagatgggatcctttggggtgtgtt 31396841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 53 - 397
Target Start/End: Original strand, 31401355 - 31401698
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc-gtggtacgtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||| ||| |||| |||| ||||||| |||||||| |  |||||||||||||    | || | |||||| |||||||| ||| ||    
T  31401355 ttggcttcaaatttgtggtttgggagaatagaggaatcgtgtcacgatttggcaatcgtgacacgatcggagaggca-gtgagctaagtttgctggaagc 31401453  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
     ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||||||||||||||||    
T  31401454 aaaatcgtgccacgatcttgggaaatcgtgacatgattcagaaacttgctgcttaagtttctctgataaggactggtcaacctggggaccgttgcagatc 31401553  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaagagagcttaa 351  Q
    ||||||| |||||||| ||||||| ||||||||||||||||||||||| |||| ||  ||||||||||||||| | ||||| |||||| |||||||||||    
T  31401554 gtgacacgatctagggtaatcgtgacacgatttcttcagggcaggacttgtatttaaagtgttcttgtgcttttttgaagacaaccttgagagagcttaa 31401653  T
Q  352 gagagaaaaatttggaggtcagagaggggatcctatggggtgtgtt 397  Q
    ||||  |||| |||||| ||| ||| |||||||| |||||||||||    
T  31401654 gaga-caaaacttggagatcaaagatgggatcctttggggtgtgtt 31401698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 53 - 324
Target Start/End: Original strand, 1456646 - 1456917
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||  | |||||| | |||| ||||| ||    
T  1456646 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagcta-gtttacaggacgc 1456744  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||| ||| |||| ||| | | |||| |||    
T  1456745 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgcttgttaagtatccctgataaggacttgtctaccttgggtcagatgcaaatc 1456844  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttt 324  Q
    |||||||  ||| ||||||||||||||||||||||| || | | |||||||||||||||||||||||||||||    
T  1456845 gtgacacggtcttgggaaatcgtggcacgatttctttagaggaagactagtatatattgtgttcttgtgcttt 1456917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 53 - 324
Target Start/End: Complemental strand, 27450401 - 27450131
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||  | |||||| | |||||||||| ||    
T  27450401 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagcta-gtttgcaggacgc 27450303  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||| |||| ||| | |  ||| |||    
T  27450302 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgggtcagacgcaaatc 27450203  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttt 324  Q
    ||||||| || | ||||||||||||||||||| |||||| | | | |||||||||||||||||||||||||||    
T  27450202 gtgacacgat-ttgggaaatcgtggcacgattgcttcagaggaaggctagtatatattgtgttcttgtgcttt 27450131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 53 - 324
Target Start/End: Complemental strand, 27445558 - 27445288
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||  ||  | |||||| | |||||||||| ||    
T  27445558 ttggcttcaaatttgtggtctagaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagcta-gtttgcaggacgc 27445460  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||| |||| ||| | |  ||| |||    
T  27445459 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgggtcagacgcaaatc 27445360  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttt 324  Q
    ||||||| || | ||||||||||||||||||| |||||| | | | |||||||||||||||||||||||||||    
T  27445359 gtgacacgat-ttgggaaatcgtggcacgattgcttcagaggaaggctagtatatattgtgttcttgtgcttt 27445288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 53 - 320
Target Start/End: Complemental strand, 43599310 - 43599043
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc--gtggtacgtgagccaagtttgcaggatg 150  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||  | ||  ||||||| | |||||||||| |    
T  43599310 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagcta-gtttgcaggacg 43599212  T
Q  151 ccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagat 250  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||| |||| ||| | |  ||| ||    
T  43599211 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgggtcagacgcaaat 43599112  T
Q  251 cgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtg 320  Q
    |||||||| || | ||||||||||| ||||||| |||||| | | | |||||||||||||||||||||||    
T  43599111 cgtgacacgat-ttgggaaatcgtgacacgattgcttcagaggaaggctagtatatattgtgttcttgtg 43599043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 53 - 320
Target Start/End: Complemental strand, 43604802 - 43604535
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc--gtggtacgtgagccaagtttgcaggatg 150  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||  | ||  ||||||| | |||||||||| |    
T  43604802 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagcta-gtttgcaggacg 43604704  T
Q  151 ccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagat 250  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||| |||| ||| | |  ||| ||    
T  43604703 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgggtcagacgcaaat 43604604  T
Q  251 cgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtg 320  Q
    |||||||| || | ||||||||||| ||||||| |||||| | | | |||||||||||||||||||||||    
T  43604603 cgtgacacgat-ttgggaaatcgtgacacgattgcttcagaggaaggctagtatatattgtgttcttgtg 43604535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 53 - 320
Target Start/End: Complemental strand, 43610294 - 43610027
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc--gtggtacgtgagccaagtttgcaggatg 150  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||  | ||  ||||||| | |||||||||| |    
T  43610294 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcgtcgtgacacgatttcaagggggccgtgagcta-gtttgcaggacg 43610196  T
Q  151 ccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagat 250  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||| |||| ||| | |  ||| ||    
T  43610195 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgggtcagacgcaaat 43610096  T
Q  251 cgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtg 320  Q
    |||||||| || | ||||||||||| ||||||| |||||| | | | |||||||||||||||||||||||    
T  43610095 cgtgacacgat-ttgggaaatcgtgacacgattgcttcagaggaaggctagtatatattgtgttcttgtg 43610027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 53 - 231
Target Start/End: Complemental strand, 30631940 - 30631762
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||| ||||||||||| ||    
T  30631940 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagcc-agtttgcaggacgc 30631842  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaa 231  Q
    |||||| || |||||| |||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||    
T  30631841 caaatcgtgacacgattttgggaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataaggactggtcaa 30631762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 107 - 324
Target Start/End: Complemental strand, 31180787 - 31180570
Alignment:
Q  107 atcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggtt 205  Q
    ||||||||||||||||  |||  |||||| | ||||||||||| |||||||| |||||||||||||||||||||||||| |||||||| |||| || |||    
T  31180787 atcgtgacacgatttcaaggtgtcgtgag-ctagtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagagactttctcgtt 31180689  T
Q  206 aagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtata 305  Q
    ||||||||||||||||||||||||||||| ||| | |  ||| |||||||||  |||| ||||||||||||||||||| |||||| | | ||||||||||    
T  31180688 aagtatcactgataaggactggtcaaccttgggtcagacgcaaatcgtgacatgatcttgggaaatcgtggcacgattgcttcagaggaagactagtata 31180589  T
Q  306 tattgtgttcttgtgcttt 324  Q
    |||||||||||||||||||    
T  31180588 tattgtgttcttgtgcttt 31180570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 53 - 223
Target Start/End: Original strand, 29402558 - 29402728
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc--gtggtacgtgagccaagtttgcaggatg 150  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||  | ||||| | |||||||||| |    
T  29402558 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtggcacgatttcaagtggc-catgagcta-gtttgcaggacg 29402655  T
Q  151 ccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataagga 223  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  29402656 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataagga 29402728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 51 - 283
Target Start/End: Complemental strand, 24136477 - 24136246
Alignment:
Q  51 atttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggat 149  Q
    |||||| ||||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||| |  |||||| | |||||||||| |    
T  24136477 atttggtttcaaatttgtggtctggaagaacacagaaatcgtgacacgaatttggcatcgtgacacaatttcgtgatgccgtgag-ctagtttgcagggt 24136379  T
Q  150 gccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtca-acctggggaccgttgcag 248  Q
    |||||||| || ||||||||||||||||||||||| ||||   ||||||||| ||||||||||  |||||||||||||||| |||| |||||    |||     
T  24136378 gccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggacgtacgcaa 24136279  T
Q  249 atcgtgacacaatctagggaaatcgtggcacgatt 283  Q
    |||||||||| ||||  ||||||||||||||||||    
T  24136278 atcgtgacacgatct--ggaaatcgtggcacgatt 24136246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 138 - 324
Target Start/End: Complemental strand, 43592779 - 43592594
Alignment:
Q  138 agtttgcaggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggg 237  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||||||| |||| ||    
T  43592779 agtttgcaggacgccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtctaccttgg 43592680  T
Q  238 gaccgttgcagatcgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttt 324  Q
    | | |  ||| |||||||||| || | ||||||||||| ||||||| |||| | | | | |||||||||||||||||||||||||||    
T  43592679 gtcagacgcaaatcgtgacacgat-ttgggaaatcgtgacacgattgcttcggaggaaggctagtatatattgtgttcttgtgcttt 43592594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 50 - 229
Target Start/End: Original strand, 26177472 - 26177651
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |  |||||| |  |||||||||     
T  26177472 gatttggcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgag-ctggtttgcaggg 26177570  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    ||||||||| || ||||||| ||||||||||||||| ||||   ||||||||| ||||||| ||  |||||||||||||||    
T  26177571 tgccaaatcgtgacacgatcatgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 26177651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 50 - 230
Target Start/End: Original strand, 29719971 - 29720152
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    |||||| |||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||  |||||| | ||| ||||||     
T  29719971 gatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgag-ctagtctgcaggg 29720069  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcag-aaacttgctggttaagtatcactgataaggactggtca 230  Q
    ||||||||| || ||||||  ||||||||||||||| ||||  | ||||||||| ||||||| ||  ||||||||||||||||    
T  29720070 tgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtca 29720152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 50 - 229
Target Start/End: Complemental strand, 9789803 - 9789624
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    |||||| |||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |  |||||| |  |||||||||     
T  9789803 gatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgag-ctggtttgcaggg 9789705  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    ||||||||| || ||||||  ||||||||||||||| ||||   ||||||||| ||||||| ||  |||||||||||||||    
T  9789704 tgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgaaaacttgctcgttaagtttccatgataaggactggtc 9789624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 39 - 229
Target Start/End: Original strand, 26170351 - 26170542
Alignment:
Q  39 aatatgtgttg-gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagcc 136  Q
    ||||||||||| | |||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||||||||||| ||| |  |||||| |    
T  26170351 aatatgtgttgagttttggcttcaaatttatggtatggaagaacagggaaatcgtgacacgaatttggtatcgtgacacgattttgtgatgccgtgag-c 26170449  T
Q  137 aagtttgcaggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
      ||||||||| ||||||||| || ||||||| |||||||||||||||| |||   ||||||||| ||||||| ||  |||||||||||||||    
T  26170450 tggtttgcagggtgccaaatcgtgacacgatcgtgggaaatcgtgacataatttgcaaacttgctcgttaagtttccatgataaggactggtc 26170542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 57 - 229
Target Start/End: Complemental strand, 22536840 - 22536668
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgccaaa 155  Q
    |||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |||  |||||| | || ||||||| ||| |||    
T  22536840 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcggggtgccgtgag-ctaggttgcagggtgcaaaa 22536742  T
Q  156 tcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    || |||||| ||  ||||||||||||||| |||   |||||||||| ||||||||||  |||||||||||||||    
T  22536741 tcgtggcacaattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 22536668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 50 - 229
Target Start/End: Original strand, 16407647 - 16407826
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||| |  |||||| |  |||||||||     
T  16407647 gatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgattttgtgatgccgtgag-ctggtttgcaggg 16407745  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    ||||||||| || |||||||||| | |||||||||| ||||   ||||||||| ||||||| ||  |||||||||| ||||    
T  16407746 tgccaaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggaccggtc 16407826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 50 - 229
Target Start/End: Complemental strand, 18442227 - 18442048
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    |||||| |||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||| || |  |||||| |  |||||||||     
T  18442227 gatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgag-ctggtttgcaggg 18442129  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    ||||||||| || ||||||  ||||||||||||||| ||||   ||||||||| ||||||| ||  |||||||||||||||    
T  18442128 tgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 18442048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 50 - 229
Target Start/End: Original strand, 16409083 - 16409262
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||| |  |||||| |  ||||||| |     
T  16409083 gatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgtcgtgag-ctggtttgcaagg 16409181  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    ||||||||  || |||||||||| | |||||||||| ||||   ||||||||| ||||||| ||  |||||||||||||||    
T  16409182 tgccaaattgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 16409262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 50 - 223
Target Start/End: Original strand, 29722158 - 29722332
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcagga 148  Q
    |||||| |||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| | ||||| | ||| |||| |     
T  29722158 gatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgctgtgag-ctagtctgcatgg 29722256  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcag-aaacttgctggttaagtatcactgataagga 223  Q
    ||||||||| || ||||||  ||||||||||||||| ||||  | ||||||||| ||||||| ||  |||||||||    
T  29722257 tgccaaatcgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataagga 29722332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 57 - 229
Target Start/End: Original strand, 10592856 - 10593027
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgccaaat 156  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||| || |   ||||||   || ||||||| ||| ||||    
T  10592856 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgattccgggtgccgtgag-ataggttgcagggtgcaaaat 10592954  T
Q  157 catggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    | ||||||||| | || ||||||||||| |||   |||||||||| ||||||||||  |||||||||||||||    
T  10592955 cgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccgtgataaggactggtc 10593027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 52 - 229
Target Start/End: Original strand, 25077713 - 25077890
Alignment:
Q  52 tttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatg 150  Q
    |||| |||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||| ||| || | |||  ||||||| | | ||| |||       
T  25077713 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacgcga-ttggaggtgccgtgagctagggttgtaggggt 25077811  T
Q  151 ccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
     |||||| || ||||||  ||||||||||||||| ||| |||||||||||| ||||||||||  |||||||||||||||    
T  25077812 gcaaatcgtgtcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 25077890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 52 - 229
Target Start/End: Original strand, 25135682 - 25135859
Alignment:
Q  52 tttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatg 150  Q
    |||| |||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||| ||| || | |||  ||||||| | | ||| |||       
T  25135682 tttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacgcga-ttggaggtgccgtgagctagggttgtaggggt 25135780  T
Q  151 ccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
     |||||| || ||||||  ||||||||||||||| ||| |||||||||||| ||||||||||  |||||||||||||||    
T  25135781 gcaaatcgtgtcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 25135859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 50 - 167
Target Start/End: Complemental strand, 29752384 - 29752267
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    |||||| |||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |  |||||| | || |||||||     
T  29752384 gatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgctgccgtgag-ctaggttgcaggg 29752286  T
Q  149 tgccaaatcatggcacgat 167  Q
    ||||||||| |||||||||    
T  29752285 tgccaaatcgtggcacgat 29752267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 50 - 209
Target Start/End: Original strand, 9352813 - 9352972
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    ||||||||||||||||| |||| || |||||||||||||||||||| ||||| ||||||||||||||||||| ||  |  |||||| |  |||||||||     
T  9352813 gatttggcttcaaatttgtggtttgaaagaacagagaaatcgtgacgcgattgtggcatcgtgacacgattttgtaatgccgtgag-ctggtttgcaggg 9352911  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagt 209  Q
    || |||||| |||||||||  || |||||||||||| ||||   |||||||||||||||||    
T  9352912 tgtcaaatcgtggcacgattctgtgaaatcgtgacacgattttcaaacttgctggttaagt 9352972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 57 - 229
Target Start/End: Original strand, 40379690 - 40379862
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgccaaa 155  Q
    |||||||||| |||||||||||||||| ||||||||| ||||||||||| |||||||||||| || | |||  ||||||| | | ||||||| ||| ||     
T  40379690 cttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggaatcgtgacacga-ttggaggtgccgtgagctagggttgcagggtgcaaat 40379788  T
Q  156 tcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    || || |||||| | || ||||||||||| |||   |||||||||| ||||||||||  |||||||||||||||    
T  40379789 tcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 40379862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 50 - 121
Target Start/End: Complemental strand, 15465119 - 15465048
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 121  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||| |||||||||||||||    
T  15465119 gatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggtatcgtgacacgattt 15465048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 57 - 229
Target Start/End: Original strand, 16546228 - 16546400
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgccaaa 155  Q
    |||||||||| |||| ||||||||||| ||||||||| ||||||||||| |||||||||||| || | |||  ||||||| | | ||||||| ||| ||     
T  16546228 cttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacga-ttggaggtgccgtgagctagggttgcagggtgcaaat 16546326  T
Q  156 tcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    || || |||||| | || ||||||||||| |||   |||||||||| ||||||||||  |||||||||||||||    
T  16546327 tcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 16546400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 57 - 229
Target Start/End: Original strand, 40381901 - 40382073
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgccaaa 155  Q
    |||||||||| ||||||| |||||||| ||||||||| ||||||||||| |||||||||||| || | |||  ||||||| | | ||||||| ||| ||     
T  40381901 cttcaaatttgtggtctgaaagaacagggaaatcgtgccacgattttggaatcgtgacacga-ttggaggtgccgtgagctagggttgcagggtgcaaat 40381999  T
Q  156 tcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    || || |||||| | || ||||||||||| |||   |||||||||| ||||||||||  |||||||||||||||    
T  40382000 tcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 40382073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 50 - 121
Target Start/End: Original strand, 36931849 - 36931920
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 121  Q
    ||||| ||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  36931849 gatttcgcttcaaatttgtggtttggaagaacagagaaatcgtgacacgaatttggcatcgtggcacgattt 36931920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 50 - 167
Target Start/End: Complemental strand, 29751718 - 29751601
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    |||||| |||||||||| |||||||||||||||| |||||||||||| || |||||||||  ||||||||||||||||  |||||| | || |||||||     
T  29751718 gatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacatgaatttggcatcacgacacgatttcgtggtgccgtgag-ctaggttgcaggg 29751620  T
Q  149 tgccaaatcatggcacgat 167  Q
    ||||||||| || ||||||    
T  29751619 tgccaaatcgtgacacgat 29751601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 57 - 229
Target Start/End: Original strand, 16544006 - 16544178
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgccaaa 155  Q
    |||||||||| |||| ||||||||||| ||||||||| ||||||||||| |||||||||||| || | ||| | |||||| | | || |||| ||| ||     
T  16544006 cttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacga-ttggaggtgctgtgagctagggttacagggtgcaaat 16544104  T
Q  156 tcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    || || |||||| | || ||||||||||| |||   |||||||||| ||||||||||  |||||||||||||||    
T  16544105 tcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 16544178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 31180822 - 31180773
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  31180822 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 31180773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 43592846 - 43592797
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  43592846 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 43592797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 12083659 - 12083708
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    ||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  12083659 ttggctttaaatttatggtttggaagaacagagaaatcgtgacacgattt 12083708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 14520845 - 14520796
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  14520845 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 14520796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 139 - 229
Target Start/End: Complemental strand, 38219935 - 38219845
Alignment:
Q  139 gtttgcaggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    ||||| ||| ||||||||| || |||||||||||||||| |||||| ||||   ||||||||| ||||||| ||  |||||||||||||||    
T  38219935 gtttgtagggtgccaaatcgtgacacgatcttgggaaattgtgacacgattttcaaacttgcttgttaagtttccatgataaggactggtc 38219845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 50 - 94
Target Start/End: Complemental strand, 35388240 - 35388196
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtga 94  Q
    |||||| |||||||||| |||||||||||||||||||||||||||    
T  35388240 gatttgacttcaaatttgtggtctggaagaacagagaaatcgtga 35388196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 52 - 102
Target Start/End: Original strand, 11916452 - 11916502
Alignment:
Q  52 tttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    ||||||||||||||| |||| || |||||||||||||||||||||| ||||    
T  11916452 tttggcttcaaatttgtggtttgaaagaacagagaaatcgtgacacaattt 11916502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 230
Target Start/End: Complemental strand, 29751615 - 29751559
Alignment:
Q  174 aaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtca 230  Q
    ||||||||||| ||||  |||||||||| ||||||||||  ||||||||||||||||    
T  29751615 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtca 29751559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 53 - 88
Target Start/End: Complemental strand, 43625640 - 43625605
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaa 88  Q
    |||||||||||||| |||||||||||||||||||||    
T  43625640 ttggcttcaaatttgtggtctggaagaacagagaaa 43625605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 121
Target Start/End: Original strand, 25412396 - 25412436
Alignment:
Q  81 cagagaaatcgtgacacgattttggcatcgtgacacgattt 121  Q
    |||||||||||||||||||||| |  |||||||||||||||    
T  25412396 cagagaaatcgtgacacgatttggcaatcgtgacacgattt 25412436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 218; Significance: 1e-120; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 53 - 396
Target Start/End: Complemental strand, 18657021 - 18656667
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||  ||||||||||||| ||    
T  18657021 ttggcttcaaatttgtggtctgaaagaacagagaaatcatgacacgattttggcatcgtgacacgatttcgtggtgccgtgaagcaagtttgcaggacgc 18656922  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
    |||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18656921 caaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 18656822  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataacctta----------- 340  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||| | ||||| |||||||               
T  18656821 gtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttgaagacaaccttaagacaaccttg 18656722  T
Q  341 agagagcttaagagagaaaaatttggaggtcagagaggggatcctatggggtgtgt 396  Q
    ||||| |||||||||| |||| |||||| ||| |||||||||||||||||||||||    
T  18656721 agagaacttaagagag-aaaacttggagatcaaagaggggatcctatggggtgtgt 18656667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 51 - 397
Target Start/End: Original strand, 2672425 - 2672781
Alignment:
Q  51 atttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggat 149  Q
    |||||||||||||||| |||||||||||||||||| ||||||| ||||||||||  |||||||||||||   | | | | | ||||||||||||| |||     
T  2672425 atttggcttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgtaatcgtgacacgatcg-gagatgccgggagccaagtttgctggaa 2672523  T
Q  150 gccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcaga 249  Q
    || ||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2672524 gcaaaatcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcaga 2672623  T
Q  250 tcgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataacctta--------- 340  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||| | ||||| |||||||             
T  2672624 tcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttgaagagaaccttaagacaacct 2672723  T
Q  341 --agagagcttaagagagaaaaatttggaggtcagagaggggatcctatggggtgtgtt 397  Q
      ||||| |||||||||| |||| |||||||||| |||||||||||| |||||||||||    
T  2672724 tgagagaacttaagagag-aaaacttggaggtcaaagaggggatcctttggggtgtgtt 2672781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 51 - 397
Target Start/End: Original strand, 2676581 - 2676937
Alignment:
Q  51 atttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc-gtggtacgtgagccaagtttgcaggat 149  Q
    |||||||||||||||| |||||||||||||||||| ||||||| ||||||||||  |||||||||||||    |  || || ||||||||||||| |||     
T  2676581 atttggcttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgtaatcgtgacacgatcggagatgt-cgggagccaagtttgctggaa 2676679  T
Q  150 gccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcaga 249  Q
    || ||||| || ||||||||||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  2676680 gcaaaatcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagaatctctgataaggactggtcaacctggggaccgttgcaga 2676779  T
Q  250 tcgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataacctta--------- 340  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||| | ||||| |||||||             
T  2676780 tcgtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttgaagagaaccttaagacaacct 2676879  T
Q  341 --agagagcttaagagagaaaaatttggaggtcagagaggggatcctatggggtgtgtt 397  Q
      ||||| |||||||||| |||| |||||||||| |||||||||||| |||||||||||    
T  2676880 tgagagaacttaagagag-aaaacttggaggtcaaagaggggatcctttggggtgtgtt 2676937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 45 - 345
Target Start/End: Complemental strand, 8512827 - 8512527
Alignment:
Q  45 tgttggatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgc 144  Q
    ||||||| ||| |||||||||  |||| ||| ||||||||| ||||||| ||||||||||   ||||||||||||   |  |   |||||| ||||||||    
T  8512827 tgttggaattgacttcaaattagtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgatcagggaggcagtgagctaagtttgc 8512728  T
Q  145 aggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgtt 244  Q
     ||| || ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  8512727 tggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacttggggaccgtt 8512628  T
Q  245 gcagatcgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaagag 344  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||| ||  ||||||||||||| | | |||| ||||||||||||    
T  8512627 gcagatcgtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgctcttttgaaggtaaccttaagag 8512528  T
Q  345 a 345  Q
    |    
T  8512527 a 8512527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 53 - 321
Target Start/End: Original strand, 40372264 - 40372531
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||| | |||||||||| ||    
T  40372264 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagcta-gtttgcaggacgc 40372362  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtca-acctggggaccgttgcagat 250  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||||||||| ||||||| || |  ||| ||    
T  40372363 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcatacctgggaacggacgcaaat 40372462  T
Q  251 cgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgc 321  Q
    |||| ||| ||||  |||||||||| |||||||||||||| | | ||||||||||||||||||||||||||    
T  40372463 cgtgccacgatct--ggaaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgc 40372531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 45 - 345
Target Start/End: Complemental strand, 8517707 - 8517407
Alignment:
Q  45 tgttggatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgc 144  Q
    ||||||| ||| |||||||||  |||| | | ||||||||| ||||||| ||||||||||   ||||||||||||   |  |   |||||| ||||||||    
T  8517707 tgttggaattgacttcaaattagtggtttaggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgatcagggaggcagtgagctaagtttgc 8517608  T
Q  145 aggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgtt 244  Q
     ||| || ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  8517607 tggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacttggggaccgtt 8517508  T
Q  245 gcagatcgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaagag 344  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||| ||  ||||||||||||| | | |||| ||||||||||||    
T  8517507 gcagatcgtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgctcttttgaaggtaaccttaagag 8517408  T
Q  345 a 345  Q
    |    
T  8517407 a 8517407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 53 - 284
Target Start/End: Original strand, 22172670 - 22172900
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||| |||||||||| ||    
T  22172670 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagcca-gtttgcaggacgc 22172768  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||| |||||| ||| ||||||||||||||||||||| ||  |||||||| |||    
T  22172769 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaaggatctctgataaggactggtcaaccttggttccgttgcaaatc 22172868  T
Q  252 gtgacacaatctagggaaatcgtggcacgattt 284  Q
    ||||||| || | ||||||||||||||||||||    
T  22172869 gtgacacgat-ttgggaaatcgtggcacgattt 22172900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 53 - 324
Target Start/End: Original strand, 28503327 - 28503598
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||  | |||||| | |||||| ||| ||    
T  28503327 ttggcttcaaatttgtggcctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagcta-gtttgctggacgc 28503425  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
    |||||| ||||||||||||||||||||||||||  ||||||||||||||| |||||||||| |||||||||||| |||||||| ||| | |  ||| |||    
T  28503426 caaatcgtggcacgatcttgggaaatcgtgacacaattcagaaacttgctcgttaagtatccctgataaggacttgtcaaccttgggtcagacgcaaatc 28503525  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttt 324  Q
    ||||||| |||| ||||||||||||||||||| |||||| | | |||||||||||||||||||||||||||||    
T  28503526 gtgacacgatcttgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttt 28503598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 45 - 323
Target Start/End: Complemental strand, 24968704 - 24968426
Alignment:
Q  45 tgttggatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgc 144  Q
    ||||||| ||| |||||||||  |||| |||||||||| || ||||||| |||||||| |  |||||||||||||   |  |   |||||||||||||||    
T  24968704 tgttggaattgacttcaaattagtggtttggaagaacaaaggaatcgtgtcacgatttggcaatcgtgacacgatcggggaggcagtgagccaagtttgc 24968605  T
Q  145 aggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgtt 244  Q
     ||| || ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  24968604 tggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtcaacctggggaccgtt 24968505  T
Q  245 gcagatcgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctt 323  Q
    ||| |||||| ||| ||||||||||||||||||||||||||||||||||| ||||||||| ||  ||||||||||||||    
T  24968504 gcaaatcgtgccacgatctagggaaatcgtggcacgatttcttcagggcaagactagtatttaaagtgttcttgtgctt 24968426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 53 - 397
Target Start/End: Complemental strand, 32476063 - 32475719
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgcc 152  Q
    |||||||||||||| |||| ||| ||||||||| ||||||| |||||||| | ||||||||||||||   |  |   ||||||||||||  | | | ||     
T  32476063 ttggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgatcagggaggcagtgagccaagttctctgaaagca 32475964  T
Q  153 aaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcg 252  Q
    ||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||| ||||    
T  32475963 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcatcttggggaccgttgcatatcg 32475864  T
Q  253 tgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaa-gataaccttaagagagcttaa 351  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||   | ||| | ||||||| ||||| |||||    
T  32475863 tgacacgatctagggaaatcgtggcacgatttcttctgggcaggactagtatttaaagtgttcttgtgctcatttgaaggttaaccttgagagaacttaa 32475764  T
Q  352 gagagaaaaatttggaggtcagagaggggatcctatggggtgtgtt 397  Q
    |||||  ||| |||||| ||| ||| |||||||| |||||||||||    
T  32475763 gagag-gaaacttggagatcaaagatgggatcctttggggtgtgtt 32475719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 53 - 397
Target Start/End: Complemental strand, 32480921 - 32480577
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgcc 152  Q
    |||||||||||||| |||| ||| ||||||||| ||||||| |||||||| | ||||||||||||||   |  |   ||||||||||||  | | | ||     
T  32480921 ttggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgatcagggaggcagtgagccaagttctctgaaagca 32480822  T
Q  153 aaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcg 252  Q
    ||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||| | |||||||||||||| ||||    
T  32480821 aaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcatcttggggaccgttgcatatcg 32480722  T
Q  253 tgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaa-gataaccttaagagagcttaa 351  Q
    |||||| |||||||||||||||||||||||||||||  |||||||||||||| ||  |||||||||||||   | ||| | ||||||| ||||| |||||    
T  32480721 tgacacgatctagggaaatcgtggcacgatttcttctaggcaggactagtatttaaagtgttcttgtgctcatttgaaggttaaccttgagagaacttaa 32480622  T
Q  352 gagagaaaaatttggaggtcagagaggggatcctatggggtgtgtt 397  Q
    |||||  ||| |||||| ||| ||| |||||||| |||||||||||    
T  32480621 gagag-gaaacttggagatcaaagatgggatcctttggggtgtgtt 32480577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 53 - 324
Target Start/End: Original strand, 28501160 - 28501431
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||  ||  | |||||| | ||||||||||  |    
T  28501160 ttggcttcaaatttgtggcctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggggccgtgagcta-gtttgcaggacac 28501258  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
    |||||| |||||||||||||| ||||||||||| |||||||||||||||| |||||||||| |||||||||||| |||||||| ||| | |  ||| |||    
T  28501259 caaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggacttgtcaaccttgggtcagacgcaaatc 28501358  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttt 324  Q
     |||||| |||| ||||||||||||||||||| |||||| | | |||||||||||||||||| ||||||||||    
T  28501359 atgacacgatcttgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgtacttgtgcttt 28501431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 53 - 321
Target Start/End: Complemental strand, 7167874 - 7167607
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||  |||  |||||| | ||||||||||| ||    
T  7167874 ttggcttcaaatttgtgttctggaagaacagagaaatcgtgacacgattttggcatcgtgacacaatttcaaggtgccgtgag-ctagtttgcaggacgc 7167776  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtca-acctggggaccgttgcagat 250  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||| ||| | |  ||| ||    
T  7167775 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtcataccttgggtcagacgcaaat 7167676  T
Q  251 cgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgc 321  Q
    |||||||| || |  | ||||| ||||||||||||||||| | | ||||||||||||||||||||||||||    
T  7167675 cgtgacacgattt--gaaaatcatggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 7167607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 56 - 321
Target Start/End: Original strand, 27352092 - 27352356
Alignment:
Q  56 gcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgccaa 154  Q
    |||| |||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||||  ||| | ||||||   |||||||| |  ||||    
T  27352092 gctttaaatttgtggtctcgaagaacagaaaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgagctt-gtttgcagaacaccaa 27352190  T
Q  155 atcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtca-acctggggaccgttgcagatcgt 253  Q
    ||| |||||||||||||||||||||||||| |||||||||||||||| ||||| |||||||||||||||||||||| |||| ||||| |  ||| |||||    
T  27352191 atcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaattatcactgataaggactggtcataccttgggacggacgcaaatcgt 27352290  T
Q  254 gacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgc 321  Q
    ||||| || |  |||||||||||||||||| |||||| | | | ||| ||||||||||||||||||||    
T  27352291 gacacgattt--ggaaatcgtggcacgattgcttcagaggaaggctaatatatattgtgttcttgtgc 27352356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 53 - 230
Target Start/End: Complemental strand, 8477994 - 8477817
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| | |||||| | |||||| ||||||    
T  8477994 ttggcttcaaatttgtggtctggaagaacagagaaattgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagcta-gtttgctggatgc 8477896  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtca 230  Q
    |||||| |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||  ||||||||||||||||    
T  8477895 caaatcgtggcacgatcttgggaaatcgtgacacgattgagaaacttgctcgttaagtatccttgataaggactggtca 8477817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 50 - 209
Target Start/End: Complemental strand, 1306598 - 1306439
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||  |||||| |  |||||||||     
T  1306598 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacatgaatttggcatcgtgacacgatttcgtggtgtcgtgag-ctggtttgcaggg 1306500  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagt 209  Q
    ||||||||| || ||||||||||||||||||||||| |||||  ||||||||| |||||||    
T  1306499 tgccaaatcgtgacacgatcttgggaaatcgtgacacgattctcaaacttgctcgttaagt 1306439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 138 - 324
Target Start/End: Original strand, 8738616 - 8738801
Alignment:
Q  138 agtttgcaggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtca-acctgg 236  Q
    ||||||||||| || ||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||||||||| |||| |    
T  8738616 agtttgcaggacgctaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttg 8738715  T
Q  237 ggaccgttgcagatcgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttt 324  Q
    | || |  ||| |||||||||  ||||  |||||||||||||||||| |||||| | | | |||||||||||||||||||||||||||    
T  8738716 gaacggacgcaaatcgtgacatgatct--ggaaatcgtggcacgattgcttcagaggaagtctagtatatattgtgttcttgtgcttt 8738801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 138 - 324
Target Start/End: Original strand, 9090854 - 9091039
Alignment:
Q  138 agtttgcaggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtca-acctgg 236  Q
    ||||||||||| || ||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||||||||| |||| |    
T  9090854 agtttgcaggacgctaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttg 9090953  T
Q  237 ggaccgttgcagatcgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttt 324  Q
    | || |  ||| |||||||||  ||||  |||||||||||||||||| |||||| | | | |||||||||||||||||||||||||||    
T  9090954 gaacggacgcaaatcgtgacatgatct--ggaaatcgtggcacgattgcttcagaggaagtctagtatatattgtgttcttgtgcttt 9091039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 57 - 229
Target Start/End: Original strand, 54634722 - 54634894
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgccaaa 155  Q
    |||||||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||||| |||  ||||||| ||| ||||||| ||| |||    
T  54634722 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggcattgtgacacgatttcggggtgccgtgagctaag-ttgcagggtgcaaaa 54634820  T
Q  156 tcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    || |||||||||  ||||||||||||||| |||   |||||||||| ||||||||||  |||||||||||||||    
T  54634821 tcgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 54634894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 91 - 230
Target Start/End: Original strand, 2671111 - 2671250
Alignment:
Q  91 gtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgccaaatcatggcacgatcttgggaaatcgtgacatgatt 189  Q
    ||||||||||||||||||||||||| ||||||  |||  |||||| | |||||||||||||||||||| |||||||||||||||||||||||||| ||||    
T  2671111 gtgacacgattttggcatcgtgacatgatttcaaggtgccgtgag-ctagtttgcaggatgccaaatcgtggcacgatcttgggaaatcgtgacacgatt 2671209  T
Q  190 cagaaacttgctggttaagtatcactgataaggactggtca 230  Q
     ||||||||||| ||||||||||  ||||||||||||||||    
T  2671210 tagaaacttgctcgttaagtatccttgataaggactggtca 2671250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 25637029 - 25637197
Alignment:
Q  61 aaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgccaaatcatg 160  Q
    |||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| ||| || |||| | | |||||||    |||||| ||    
T  25637029 aaatttgtggtctggaagaacagggaaatcgtgacacgattgtggcatcgtgacacgatttcgaggtgcgagagctagggttgcaggggtgcaaatcgtg 25637128  T
Q  161 gcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    |||||||  ||||||||||||||| |||   |||||||||| ||||||||||  |||||||||||||||    
T  25637129 gcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 25637197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 6716101 - 6716269
Alignment:
Q  61 aaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgccaaatcat 159  Q
    |||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| |||  |||||| | || ||||||| ||| ||||| |    
T  6716101 aaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggggtgccgtgag-ctaggttgcagggtgcaaaatcgt 6716199  T
Q  160 ggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    | ||||||  ||||||||||||||| |||   |||||||||| ||||||||||  |||||||||||||||    
T  6716200 gtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 6716269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 50 - 229
Target Start/End: Complemental strand, 23200723 - 23200544
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcagga 148  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| | | ||||| |  |||||||||     
T  23200723 gatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgctgtgag-ctggtttgcaggg 23200625  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    ||||||||| || |||||| | | | |||||||||| ||||   ||||||||| ||||||| ||   ||||||||||||||    
T  23200624 tgccaaatcgtgacacgatttggaggaatcgtgacacgatttgcaaacttgctcgttaagtttccaggataaggactggtc 23200544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 50 - 229
Target Start/End: Original strand, 800691 - 800870
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    |||||| |||| ||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |  |||||| |  |||||| ||     
T  800691 gatttgtcttcgaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgag-ctggtttgcgggg 800789  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    ||||||||| || ||||||  ||||||||||||||| ||||   ||||||||| ||||||| ||  ||||||||| |||||    
T  800790 tgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggaatggtc 800870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 50 - 229
Target Start/End: Complemental strand, 23198524 - 23198345
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||||| ||| |  |||||| |  |||||||||     
T  23198524 gatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttgacatcgtgacacgattttgtgatgccgtgag-ctggtttgcaggg 23198426  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    ||||||||| || |||||| | | | |||||||||| ||||   ||||||||| ||||||| ||   ||||||||||||||    
T  23198425 tgccaaatcgtgacacgatttggaggaatcgtgacacgatttgcaaacttgctcgttaagtttccaggataaggactggtc 23198345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 50 - 209
Target Start/End: Original strand, 26928086 - 26928245
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||  |  |||||| |  |||||||||     
T  26928086 gatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgttatgccgtgag-ctggtttgcaggg 26928184  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagt 209  Q
    ||||||||| || ||| |||||| | |||||||||| ||||   ||||||||| |||||||    
T  26928185 tgccaaatcgtgacacaatcttgtggaatcgtgacacgattttcaaacttgctcgttaagt 26928245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 50 - 209
Target Start/End: Original strand, 33386143 - 33386302
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    ||||||||||||||||| ||||| | |||||||||||||||||||||||| ||||||||||||||||||||| ||| |  |||||| |  |||||||||     
T  33386143 gatttggcttcaaatttgtggtccgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgag-ctggtttgcaggg 33386241  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagt 209  Q
    ||||||||| || |||||| ||| | |||||||||| ||||   |||||||||||||||||    
T  33386242 tgccaaatcgtgacacgattttgtggaatcgtgacacgattttcaaacttgctggttaagt 33386302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 57 - 229
Target Start/End: Complemental strand, 4599095 - 4598922
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgccaaat 156  Q
    |||||||||| |||| ||||||||||| ||||||||||||||||||||| |||| ||||||||||||     ||||||| | | |||||||    |||||    
T  4599095 cttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttcggatgccgtgagctagggttgcaggggtgcaaat 4598996  T
Q  157 catggcacgatct-tgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    | ||||||||| | ||||||||||||||| |||  ||||||||||| ||||||||||  |||||||||||||||    
T  4598995 cgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 4598922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 57 - 229
Target Start/End: Complemental strand, 4601316 - 4601143
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgccaaat 156  Q
    |||||||||| |||| ||||||||||| ||||||||||||||||||||| |||| ||||||||||||     ||||||| | | |||||||    |||||    
T  4601316 cttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttgggatcgcgacacgatttcggatgccgtgagctagggttgcaggggtgcaaat 4601217  T
Q  157 catggcacgatct-tgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    | ||||||||| | ||||||||||||||| |||  ||||||||||| ||||||||||  |||||||||||||||    
T  4601216 cgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 4601143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 50 - 125
Target Start/End: Complemental strand, 7782706 - 7782631
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtg 125  Q
    ||||||||||||||||| |||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  7782706 gatttggcttcaaatttgtggtctagaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtg 7782631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 52 - 229
Target Start/End: Original strand, 10055812 - 10055990
Alignment:
Q  52 tttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgc 151  Q
    |||| |||||||||| |||| ||||||||||| ||||||||||||||||||||| |||||||| ||||||||     ||||||  | | |||||||        
T  10055812 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtg 10055911  T
Q  152 caaatcatggcacgatcttggg-aaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    |||||| || |||||| ||||| ||||||||||| |||  ||||||||||| ||||||||||  |||||||||||||||    
T  10055912 caaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 10055990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 52 - 229
Target Start/End: Original strand, 10058034 - 10058212
Alignment:
Q  52 tttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgc 151  Q
    |||| |||||||||| |||| ||||||||||| ||||||||||||||||||||| |||||||| ||||||||     ||||||  | | |||||||        
T  10058034 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtg 10058133  T
Q  152 caaatcatggcacgatcttggg-aaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    |||||| || |||||| ||||| ||||||||||| |||  ||||||||||| ||||||||||  |||||||||||||||    
T  10058134 caaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 10058212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 52 - 229
Target Start/End: Original strand, 10060256 - 10060434
Alignment:
Q  52 tttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgc 151  Q
    |||| |||||||||| |||| ||||||||||| ||||||||||||||||||||| |||||||| ||||||||     ||||||  | | |||||||        
T  10060256 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtg 10060355  T
Q  152 caaatcatggcacgatcttggg-aaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    |||||| || |||||| ||||| ||||||||||| |||  ||||||||||| ||||||||||  |||||||||||||||    
T  10060356 caaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 10060434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 52 - 229
Target Start/End: Original strand, 10062478 - 10062656
Alignment:
Q  52 tttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgc 151  Q
    |||| |||||||||| |||| ||||||||||| ||||||||||||||||||||| |||||||| ||||||||     ||||||  | | |||||||        
T  10062478 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtg 10062577  T
Q  152 caaatcatggcacgatcttggg-aaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    |||||| || |||||| ||||| ||||||||||| |||  ||||||||||| ||||||||||  |||||||||||||||    
T  10062578 caaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 10062656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 52 - 229
Target Start/End: Original strand, 10064700 - 10064878
Alignment:
Q  52 tttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgc 151  Q
    |||| |||||||||| |||| ||||||||||| ||||||||||||||||||||| |||||||| ||||||||     ||||||  | | |||||||        
T  10064700 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtg 10064799  T
Q  152 caaatcatggcacgatcttggg-aaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    |||||| || |||||| ||||| ||||||||||| |||  ||||||||||| ||||||||||  |||||||||||||||    
T  10064800 caaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 10064878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 52 - 229
Target Start/End: Original strand, 10066922 - 10067100
Alignment:
Q  52 tttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgc 151  Q
    |||| |||||||||| |||| ||||||||||| ||||||||||||||||||||| |||||||| ||||||||     ||||||  | | |||||||        
T  10066922 tttgtcttcaaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtg 10067021  T
Q  152 caaatcatggcacgatcttggg-aaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    |||||| || |||||| ||||| ||||||||||| |||  ||||||||||| ||||||||||  |||||||||||||||    
T  10067022 caaatcgtgacacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 10067100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 57 - 229
Target Start/End: Original strand, 3617046 - 3617218
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgccaaat 156  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||     ||||||| | | |||||||    |||||    
T  3617046 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcaggggtgcaaat 3617145  T
Q  157 catggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    | || |||||| | || ||||||||||| |||   |||||||||| ||||||||||  |||||| | ||||||    
T  3617146 cgtgtcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataacggctggtc 3617218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 50 - 209
Target Start/End: Original strand, 37408042 - 37408200
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    ||||||||||||||||| |||| |||||||||| |||||||||||||||||| ||||||||||||||||||| || ||  |||||| |  |||||||||     
T  37408042 gatttggcttcaaatttgtggtttggaagaacaaagaaatcgtgacacgattgtggcatcgtgacacgattttgtagtgccgtgag-ctggtttgcaggg 37408140  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagt 209  Q
    || |||||| ||||||||| |  | ||||||||||| ||||   ||||||| |||||||||    
T  37408141 tgtcaaatcgtggcacgat-tgtgtaaatcgtgacacgattttcaaacttgttggttaagt 37408200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 50 - 209
Target Start/End: Complemental strand, 37726293 - 37726134
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||  ||||||||||||||| ||| |  |||||| |  |||||||||     
T  37726293 gatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgaatttgatatcgtgacacgattttgtgatgccgtgag-ctggtttgcaggg 37726195  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagt 209  Q
    || |||||| || |||||| ||| | |||||||||| ||||   ||||||| |||||||||    
T  37726194 tgtcaaatcgtgacacgattttgtggaatcgtgacacgattttcaaacttgttggttaagt 37726134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 57 - 229
Target Start/End: Original strand, 10208790 - 10208963
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgccaaat 156  Q
    |||||||||| |||| ||||||||||| |||||| |||||||||||||| |||||||| ||||||||     ||||||  | | |||||||    |||||    
T  10208790 cttcaaatttgtggtttggaagaacagggaaatcatgacacgattttggtatcgtgacgcgatttcggatgccgtgagttagggttgcaggggtgcaaat 10208889  T
Q  157 catggcacgatcttggg-aaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    | ||||||||| ||||| ||||||||||| |||  ||||||||||| ||||| ||||  |||||||||||||||    
T  10208890 cgtggcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaaatatccttgataaggactggtc 10208963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 50 - 209
Target Start/End: Complemental strand, 27453575 - 27453416
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    ||||||||||||||||| ||||||| |||| ||||||||| ||||||||| ||||||||||||||||||||| ||| |  |||||| |  ||||| |||     
T  27453575 gatttggcttcaaatttgtggtctgaaagagcagagaaattgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgag-ctggtttgtaggg 27453477  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagt 209  Q
    ||||||||| || || |||  || | |||||||||| ||||   |||||||||||||||||    
T  27453476 tgccaaatcgtgacatgattgtgtggaatcgtgacacgattttcaaacttgctggttaagt 27453416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 229
Target Start/End: Original strand, 10210994 - 10211163
Alignment:
Q  61 aaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgccaaatcatg 160  Q
    |||||| |||| ||||||||||| ||||||||||||||||||||| |||||||| |||||| |     ||||||  | | |||||||    |||||| ||    
T  10210994 aaatttgtggtttggaagaacagggaaatcgtgacacgattttggtatcgtgacgcgatttaggatgccgtgagttagggttgcaggggtgcaaatcgtg 10211093  T
Q  161 gcacgatcttggg-aaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    ||||||| ||||| ||||| ||||| |||  ||||||||||| ||||||||||  |||||||||||||||    
T  10211094 gcacgattttgggaaaatcatgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 10211163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 32143922 - 32143868
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttg 104  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  32143922 gatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgattttg 32143868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 51 - 104
Target Start/End: Original strand, 27974440 - 27974493
Alignment:
Q  51 atttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttg 104  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  27974440 atttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttg 27974493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 36029708 - 36029640
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 121  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||  || |||| ||||||||    
T  36029708 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttatcaacgtgtcacgattt 36029640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 8738550 - 8738599
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  8738550 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgattt 8738599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 9090788 - 9090837
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  9090788 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgattt 9090837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 21711817 - 21711768
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  21711817 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 21711768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 30709267 - 30709316
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  30709267 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 30709316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 6718331 - 6718453
Alignment:
Q  107 atcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggtt 205  Q
    ||||||||||||||||| ||| | |||||| | ||| ||||| ||| ||||| || ||||||  ||||||||||||||| |||   |||||||||| |||    
T  6718331 atcgtgacacgatttcggggtgccgtgagctaggtt-gcagggtgcaaaatcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgtt 6718429  T
Q  206 aagtatcactgataaggactggtc 229  Q
    |||||||  |||||||||||||||    
T  6718430 aagtatccttgataaggactggtc 6718453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 268 - 321
Target Start/End: Original strand, 2671268 - 2671321
Alignment:
Q  268 aaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgc 321  Q
    |||||||| |||||||||||||| | | ||||||||||||||||||||||||||    
T  2671268 aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgc 2671321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 6718300 - 6718345
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||    
T  6718300 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 6718345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 16264945 - 16264896
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| |||| ||||||||||| ||||||||||||||||||    
T  16264945 ttggcttcaaatttgtggtttggaagaacagcgaaatcgtgacacgattt 16264896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 102
Target Start/End: Complemental strand, 27027318 - 27027273
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||    
T  27027318 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 27027273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 122
Target Start/End: Complemental strand, 27038657 - 27038588
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 122  Q
    |||||||||| ||| |||| ||||| ||||||||||||||||||||||||   || ||||||||||||||    
T  27038657 ttggcttcaagtttgtggtttggaaaaacagagaaatcgtgacacgatttcatcaacgtgacacgatttc 27038588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 39032026 - 39032075
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| | || ||||||||||||||||||||||||||||||    
T  39032026 ttggcttcaaatttgttgtttggaagaacagagaaatcgtgacacgattt 39032075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 40734087 - 40734132
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||    
T  40734087 cttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 40734132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 103
Target Start/End: Complemental strand, 40845273 - 40845220
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgatttt 103  Q
    |||||| ||||||||||||| | ||| |||||||||||||||||||||||||||    
T  40845273 gatttgtcttcaaatttatgttttgggagaacagagaaatcgtgacacgatttt 40845220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 57 - 102
Target Start/End: Original strand, 45282597 - 45282642
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||    
T  45282597 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattt 45282642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 53 - 95
Target Start/End: Original strand, 1730917 - 1730959
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgac 95  Q
    |||||||||||||| |||| |||||||||||||||||||||||    
T  1730917 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgac 1730959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 58 - 104
Target Start/End: Original strand, 27985971 - 27986017
Alignment:
Q  58 ttcaaatttatggtctggaagaacagagaaatcgtgacacgattttg 104  Q
    ||||||||| |||| ||||| ||||||||||||||||||||||||||    
T  27985971 ttcaaatttgtggtttggaataacagagaaatcgtgacacgattttg 27986017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 35926105 - 35926057
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    ||||||||||||||  ||| ||||||||||||||||||||||||||||||    
T  35926105 ttggcttcaaatttg-ggtttggaagaacagagaaatcgtgacacgattt 35926057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 40592253 - 40592302
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| |||| ||||||||| |||||||||||||| |||||    
T  40592253 ttggcttcaaatttgtggtttggaagaacggagaaatcgtgacatgattt 40592302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 48438831 - 48438782
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    ||||||| |||||| |||| || |||||||||||||||||||||||||||    
T  48438831 ttggctttaaatttgtggtttgtaagaacagagaaatcgtgacacgattt 48438782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 107 - 229
Target Start/End: Original strand, 45282628 - 45282750
Alignment:
Q  107 atcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggtt 205  Q
    ||||||||||||||||| ||| | |||||| | ||| ||||| ||| || || || |||||| | || ||||||||||| |||   |||||||||| |||    
T  45282628 atcgtgacacgatttcggggtgccgtgagctaggtt-gcagggtgcaaattcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgtt 45282726  T
Q  206 aagtatcactgataaggactggtc 229  Q
    |||||||  |||||||||||||||    
T  45282727 aagtatccttgataaggactggtc 45282750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 24694656 - 24694706
Alignment:
Q  53 ttggcttcaaatttatggtct-ggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| |||| | ||||||||||||||||||||| |||||||    
T  24694656 ttggcttcaaatttgtggttttggaagaacagagaaatcgtgatacgattt 24694706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 57 - 203
Target Start/End: Original strand, 40735018 - 40735163
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgccaaat 156  Q
    |||||||||| |||| |||| ||||||| |||||||||||||||||   || |||| |||||||||   | | ||||||   ||||||||| |||  |||    
T  40735018 cttcaaatttgtggtttggatgaacagataaatcgtgacacgatttcatcaacgtgtcacgatttccaagca-gtgagcatggtttgcagggtgctcaat 40735116  T
Q  157 catggcacgatcttgggaaatcgtgacatgattcagaaacttgctgg 203  Q
    | || |||||| |||||||| ||||||| ||||   |||||||||||    
T  40735117 cgtgtcacgattttgggaaaacgtgacacgattttcaaacttgctgg 40735163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 16498645 - 16498694
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| |||| ||||  |||||||||||||||||| |||||    
T  16498645 ttggcttcaaatttgtggtttggagaaacagagaaatcgtgacatgattt 16498694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 73 - 102
Target Start/End: Complemental strand, 43404515 - 43404486
Alignment:
Q  73 tggaagaacagagaaatcgtgacacgattt 102  Q
    ||||||||||||||||||||||||||||||    
T  43404515 tggaagaacagagaaatcgtgacacgattt 43404486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 121
Target Start/End: Complemental strand, 9634856 - 9634816
Alignment:
Q  81 cagagaaatcgtgacacgattttggcatcgtgacacgattt 121  Q
    |||||||||||||||||||||| |  |||||||||||||||    
T  9634856 cagagaaatcgtgacacgatttggcaatcgtgacacgattt 9634816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 324
Target Start/End: Original strand, 22172932 - 22172960
Alignment:
Q  296 gactagtatatattgtgttcttgtgcttt 324  Q
    |||||||||||||||||||||||||||||    
T  22172932 gactagtatatattgtgttcttgtgcttt 22172960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 53 - 396
Target Start/End: Complemental strand, 937 - 595
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||  | ||| | ||||||||||||||| ||||||    
T  937 ttggcttcaaatttgtggtatggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattg-gaggtgccgtgagccaagtttgctggatgc 839  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
     ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| | ||  ||||||||||||    
T  838 aaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaactttggttccgttgcagatc 739  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaagagagcttaa 351  Q
    ||||||| |||||||||||||||| |||||||||||||||| |||||| |||||||||||||||||||||||| | ||||| ||||||||||||||||||    
T  738 gtgacacgatctagggaaatcgtgacacgatttcttcaggggaggactggtatatattgtgttcttgtgcttttttgaagacaaccttaagagagcttaa 639  T
Q  352 gagagaaaaatttggaggtcagagaggggatcctatggggtgtgt 396  Q
    ||||| |||  |||||| ||| |||||||||||||||||||||||    
T  638 gagag-aaatcttggagatcaaagaggggatcctatggggtgtgt 595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 198; Significance: 1e-108; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 45 - 397
Target Start/End: Original strand, 21811739 - 21812090
Alignment:
Q  45 tgttggatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttg 143  Q
    ||||| |||||||||||||||| |||||||||||||||||| ||||||| |||||||||| |||||||||||||| | | | | | |||||| | |||||    
T  21811739 tgttgtatttggcttcaaatttgtggtctggaagaacagaggaatcgtgtcacgattttgccatcgtgacacgatct-gagatgccgtgagcaatgtttg 21811837  T
Q  144 caggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgt 243  Q
    |||| ||| ||||| |||||||||||||||||||||||||| ||| |||||||||||| |||||||||| ||||||||||||||||||||||| ||||||    
T  21811838 cagggtgcaaaatcgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctagttaagtatctctgataaggactggtcaacctggagaccgt 21811937  T
Q  244 tgcagatcgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaaga 343  Q
    ||||||| ||| ||| |||| ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||| | |||| |||||||||||    
T  21811938 tgcagattgtgtcacgatcttgggaaatcgtggcacgatttactcagggcaggactagtatatattgtgttcttgtgcttttttgaagctaaccttaaga 21812037  T
Q  344 gagcttaagagagaaaaatttggaggtcagagaggggatcctatggggtgtgtt 397  Q
    || |||||||||| |||  |||||||||| |||||||||||| |||||||||||    
T  21812038 gaacttaagagag-aaagcttggaggtcaaagaggggatcctttggggtgtgtt 21812090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 53 - 346
Target Start/End: Original strand, 31109078 - 31109372
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||| |||||||||  |   | || ||| |||||||||||| ||    
T  31109078 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattttggcatcgtggcacgatttcaagtgcctgtaagctaagtttgcaggacgc 31109177  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||  ||| ||| ||||||||||||    
T  31109178 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtataactgataaggacttgtctgccttggggccgttgcagatc 31109277  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaagagag 346  Q
    ||||||| ||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||| | |||||||| ||||||||||    
T  31109278 gtgacacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttgaagataaacttaagagag 31109372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 56 - 324
Target Start/End: Original strand, 24023830 - 24024096
Alignment:
Q  56 gcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc--gtggtacgtgagccaagtttgcaggatgcca 153  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||||||||| |||||||||  |||| | | |||| | |||||||||| ||||    
T  24023830 gcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattgtggcatcgtggcacgatttcaagtggca-gagagcta-gtttgcaggacgcca 24023927  T
Q  154 aatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgt 253  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24023928 aatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgt 24024027  T
Q  254 gacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttt 324  Q
    ||||| ||||||||||||||||||||||||||||||||| | ||||||||||||  |||||||||||||||    
T  24024028 gacacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatata--gtgttcttgtgcttt 24024096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 172; E-Value: 3e-92
Query Start/End: Original strand, 53 - 349
Target Start/End: Complemental strand, 4873713 - 4873417
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc--gtggtacgtgagccaagtttgcaggatg 150  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||  ||| ||  | |||||||||| |    
T  4873713 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggc-cgtaagata-gtttgcaggacg 4873616  T
Q  151 ccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagat 250  Q
    ||||||| ||||||||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||||||| |||  ||| ||| |||||||| ||    
T  4873615 ccaaatcgtggcacgatcttgggaaatcgtgacacaattcagaaacttgctcgttaagtatcactgataaggacttgtcttccttgggtccgttgcaaat 4873516  T
Q  251 cgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaagagagctt 349  Q
    |||||||| ||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||| | |||||  | |||||||||||||    
T  4873515 cgtgacacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttgaagaagaacttaagagagctt 4873417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 53 - 311
Target Start/End: Complemental strand, 12406849 - 12406591
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc--gtggtacgtgagccaagtttgcaggatg 150  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||  ||||||| | ||||||| || |    
T  12406849 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtggc-cgtgagcta-gtttgcaagacg 12406752  T
Q  151 ccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagat 250  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||| |||| ||| |||||||| ||    
T  12406751 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttgggtccgttgcaaat 12406652  T
Q  251 cgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgt 311  Q
    |||||||| || | |||||||||||||||||||||||||| | | ||||||||||||||||    
T  12406651 cgtgacacgatttggggaaatcgtggcacgatttcttcagaggaagactagtatatattgt 12406591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 45 - 397
Target Start/End: Complemental strand, 16880660 - 16880308
Alignment:
Q  45 tgttggatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgc 144  Q
    ||||||| ||| |||||||||  |||| ||||||| ||||| ||||||| |||||||||| ||||||||||||||   |  |   ||||||| |||||||    
T  16880660 tgttggaattgacttcaaattagtggtttggaagagcagaggaatcgtgtcacgattttgccatcgtgacacgatcagggaggcagtgagcctagtttgc 16880561  T
Q  145 aggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgtt 244  Q
     ||| || ||||| || |||||||||||||||| |||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  16880560 tggaagcaaaatcgtgtcacgatcttgggaaattgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtcaacctggggaccgtt 16880461  T
Q  245 gcagatcgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaa-gataaccttaaga 343  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||   | ||| | ||||||| |||    
T  16880460 gcagatcgtgacacgatctagggaaatcgtggcacgatttcttctgggcaggactagtatttaaagtgttcttgtgctcatttgaaggttaaccttgaga 16880361  T
Q  344 gagcttaagagagaaaaatttggaggtcagagaggggatcctatggggtgtgtt 397  Q
    || ||||||||||  ||| |||||| ||| ||| |||||||| |||||||||||    
T  16880360 gaacttaagagag-gaaacttggagatcaaagatgggatcctttggggtgtgtt 16880308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 45 - 345
Target Start/End: Original strand, 24265677 - 24265977
Alignment:
Q  45 tgttggatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgc 144  Q
    ||||||| ||| |||||||||  |||| ||| ||||||||| ||||||| ||||||||||   ||||||||||||   |  |   |||||| ||||||||    
T  24265677 tgttggaattgacttcaaattagtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgatcagggaggcagtgagctaagtttgc 24265776  T
Q  145 aggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgtt 244  Q
     ||| || ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  24265777 tggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacttggggaccgtt 24265876  T
Q  245 gcagatcgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaagag 344  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||| ||  ||||||||||||| | | |||| ||||||||||||    
T  24265877 gcagatcgtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgctcttttgaaggtaaccttaagag 24265976  T
Q  345 a 345  Q
    |    
T  24265977 a 24265977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 45 - 390
Target Start/End: Complemental strand, 16885515 - 16885170
Alignment:
Q  45 tgttggatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgc 144  Q
    ||||||| ||| |||||||||  |||| ||||||| ||||| ||||||| |||||||||| ||||||||||||||   |  |   ||||||| |||||||    
T  16885515 tgttggaattgacttcaaattagtggtttggaagagcagaggaatcgtgtcacgattttgccatcgtgacacgatcagggaggcagtgagcctagtttgc 16885416  T
Q  145 aggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgtt 244  Q
     ||| || ||||| || |||||||||||||||| |||||| |||||||||||||||||||||||| || |||||||||||||||||||||||||||||||    
T  16885415 tggaagcaaaatcgtgtcacgatcttgggaaattgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtcaacctggggaccgtt 16885316  T
Q  245 gcagatcgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaa-gataaccttaaga 343  Q
    |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||  |||||||||||||   | ||| | ||||||| |||    
T  16885315 gcagatcgtgacacgatctagggaaatcgtggcacgatttcttctgggcaggactagtatttaaagtgttcttgtgctcatttgaaggttaaccttgaga 16885216  T
Q  344 gagcttaagagagaaaaatttggaggtcagagaggggatcctatggg 390  Q
    || ||||||||||  ||| |||||| ||| ||| |||||||| ||||    
T  16885215 gaacttaagagag-gaaacttggagatcaaagatgggatcctttggg 16885170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 45 - 397
Target Start/End: Original strand, 24260821 - 24261173
Alignment:
Q  45 tgttggatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgc 144  Q
    ||||||| |||||||||||||| |||| ||| ||||||||| ||||||| |||||||| | ||||||||||||||   |  |   |||||||||||   |    
T  24260821 tgttggaattggcttcaaatttgtggtttgggagaacagaggaatcgtgtcacgatttggccatcgtgacacgatcagggaggcagtgagccaagtaatc 24260920  T
Q  145 aggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgtt 244  Q
     | | || ||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| || ||||||||    
T  24260921 tgaaagcaaaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacttgaggaccgtt 24261020  T
Q  245 gcagatcgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaa-gataaccttaaga 343  Q
    | | |||||||||| |||||||||||||||||||||||||| ||||| |||||||||||| ||  |||||||||||||   | ||| | ||||||| |||    
T  24261021 gaaaatcgtgacacgatctagggaaatcgtggcacgatttcatcaggacaggactagtatttaaagtgttcttgtgctcatttgaaggttaaccttgaga 24261120  T
Q  344 gagcttaagagagaaaaatttggaggtcagagaggggatcctatggggtgtgtt 397  Q
    || ||||||||||  ||| |||||| ||| ||| |||||||| |||||||||||    
T  24261121 gaacttaagagag-gaaacttggagatcaaagatgggatcctttggggtgtgtt 24261173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 53 - 321
Target Start/End: Complemental strand, 2058596 - 2058330
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| | |||||| | |||||||||| ||    
T  2058596 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt-gaggtgccgtgagcta-gtttgcaggacgc 2058499  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtca-acctggggaccgttgcagat 250  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||  |||||||||||||||| |||| |||      ||| ||    
T  2058498 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaat 2058399  T
Q  251 cgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgc 321  Q
    |||||||| ||||  |||||||||||||||||| |||||| | | | ||||||||||||||||||||||||    
T  2058398 cgtgacacgatct--ggaaatcgtggcacgattgcttcagaggaaggctagtatatattgtgttcttgtgc 2058330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 53 - 230
Target Start/End: Complemental strand, 21640415 - 21640238
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||| | |||||||||| ||    
T  21640415 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgaggtgccgtgagcta-gtttgcaggacgc 21640317  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtca 230  Q
    |||||| || ||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||||    
T  21640316 caaatcgtgacacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactggtca 21640238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 53 - 231
Target Start/End: Original strand, 20357036 - 20357214
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||  |||||| | ||||||||||| ||    
T  20357036 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgag-ctagtttgcaggacgc 20357134  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaa 231  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||| ||||||    
T  20357135 caaatcgtggcacgatcttgggaaatcgtgacatgattcagaaacttgctcgttaagtatccttgataaggaccggtcaa 20357214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 53 - 349
Target Start/End: Complemental strand, 12397484 - 12397200
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc--gtggtacgtgagccaagtttgcaggatg 150  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||  ||||  ||||||| | |||||||||       
T  12397484 ttggcttcaaatttgtggtctggaagaacagagaaatcgcgacacgattttggtatcgtgacacgatttcaagtggc-cgtgagcta-gtttgcaggc-- 12397389  T
Q  151 ccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagat 250  Q
               || |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||| |||| ||| |||||||| ||    
T  12397388 -----------catgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttgggtccgttgcaaat 12397300  T
Q  251 cgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtg-ctttgtagaagataaccttaagagagctt 349  Q
    |||||||| || | |||||||||||||||||||||||||| | |  |||||||||||||||||||||||| |||| | |||||  | |||||||||||||    
T  12397299 cgtgacacgatttggggaaatcgtggcacgatttcttcagaggaatactagtatatattgtgttcttgtgccttttttgaagaagaacttaagagagctt 12397200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 50 - 230
Target Start/End: Original strand, 24789432 - 24789612
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    |||||| |||||||||| |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||  |||||| | ||||||||||     
T  24789432 gatttgtcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtggtgccgtgag-ctagtttgcaggg 24789530  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtca 230  Q
    ||||||||| |||||||||||||||||||||||||| ||||  |||||||||| ||||||||||  ||||||||||||||||    
T  24789531 tgccaaatcgtggcacgatcttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtca 24789612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 50 - 229
Target Start/End: Complemental strand, 18409393 - 18409214
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    ||||||||||||||||| || |||||||||||||||||||||| |||||| ||||||||||||||||||||| |||||  |||||| |  |||||||||     
T  18409393 gatttggcttcaaatttgtgttctggaagaacagagaaatcgtaacacgaatttggcatcgtgacacgattttgtggtgccgtgag-ctggtttgcaggg 18409295  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    |||||||||||| |||||||||| |||||||||||| |||||  ||||||||| ||||||| ||  |||||||||||||||    
T  18409294 tgccaaatcatgacacgatcttgagaaatcgtgacacgattctcaaacttgcttgttaagtttccatgataaggactggtc 18409214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 50 - 229
Target Start/End: Complemental strand, 18414269 - 18414090
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| |||||  |||||| |  |||||||||     
T  18414269 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgaatttggcatcgtggcacgattttgtggtgccgtgag-ctggtttgcaggg 18414171  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
     |||||||| || ||||||||||||||||||| ||| |||||  ||||||||| ||||||| ||  |||||||||||||||    
T  18414170 cgccaaatcgtgacacgatcttgggaaatcgtaacacgattctcaaacttgcttgttaagtttccatgataaggactggtc 18414090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 51 - 230
Target Start/End: Complemental strand, 21646636 - 21646457
Alignment:
Q  51 atttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggat 149  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||| |  |||||| |  ||||||||| |    
T  21646636 atttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacaaatttggcatcgtgacacgatttcgtgatgccgtgag-ctggtttgcagggt 21646538  T
Q  150 gccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtca 230  Q
    |||||||| || ||||||||||| ||||||||||| ||||   ||||||||| ||||||||||  ||||||| ||||||||    
T  21646537 gccaaatcgtgacacgatcttggaaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataagaactggtca 21646457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 50 - 229
Target Start/End: Original strand, 39730939 - 39731118
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |  |||||| |  |||||||||     
T  39730939 gatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgag-ctggtttgcaggg 39731037  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    ||||||||| || |||||||||| | |||||||||| ||||   ||||||||| ||||||| ||  |||||||||||||||    
T  39731038 tgccaaatcgtgacacgatcttgaggaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 39731118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 50 - 229
Target Start/End: Complemental strand, 43504715 - 43504536
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    ||||| ||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |  |||||| |  |||||||||     
T  43504715 gatttagcttcaaatttgtggtctggaagaacagggaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgag-ctggtttgcaggg 43504617  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    ||||||||| || ||||||| ||||||||||||||| ||||   ||||||||| ||||||| ||  |||||||||||||||    
T  43504616 tgccaaatcgtgacacgatcgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 43504536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 50 - 229
Target Start/End: Original strand, 48408404 - 48408583
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    ||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||| |  |||||| |  |||||||||     
T  48408404 gatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgag-ctggtttgcaggg 48408502  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    ||||||||| || |||||||||| |||||||||||| ||||   ||||||||| ||||||| ||   ||||||||||||||    
T  48408503 tgccaaatcgtgacacgatcttgagaaatcgtgacacgatttgcaaacttgctcgttaagtttctaggataaggactggtc 48408583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 57 - 229
Target Start/End: Complemental strand, 6592909 - 6592737
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgccaaat 156  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||     ||||||| | | |||||||    |||||    
T  6592909 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttgcaggggtgcaaat 6592810  T
Q  157 catggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    | ||||||||| | || ||||||||||| ||| |||||||||||| ||||||||||  |||||||||||||||    
T  6592809 cgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 6592737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 57 - 229
Target Start/End: Original strand, 20343512 - 20343684
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgccaaa 155  Q
    |||||||||| |||||||||||||||| ||||||||||| ||||| ||||||||||||||||||||| |||  |||||| | || |||| |||||| |||    
T  20343512 cttcaaatttgtggtctggaagaacagggaaatcgtgacgcgattgtggcatcgtgacacgatttcggggtgccgtgag-ctaggttgccggatgcaaaa 20343610  T
Q  156 tcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    || || ||||||  ||||||||||||||| |||   |||||||||| ||||||||||  |||||||||||||||    
T  20343611 tcgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 20343684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 57 - 229
Target Start/End: Complemental strand, 6595125 - 6594953
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgccaaat 156  Q
    |||||||||| |||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||     ||||||| | | |||||||    |||||    
T  6595125 cttcaaatttgtggtctggaaaaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttgcaggggtgcaaat 6595026  T
Q  157 catggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    | ||||||||| | || ||||||||||| ||| |||||||||||| ||||||||||  |||||||||||||||    
T  6595025 cgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 6594953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 57 - 229
Target Start/End: Complemental strand, 32060876 - 32060704
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgccaaat 156  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||     ||||||| | | |||||||    |||||    
T  32060876 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcggatgccgtgagctagggttgcaggggtgcaaat 32060777  T
Q  157 catggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    | ||||||||| | || ||||||||||| |||  ||||||||||| ||||||||||  |||||||||||||||    
T  32060776 cgtggcacgatttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtc 32060704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 88 - 319
Target Start/End: Original strand, 1532947 - 1533177
Alignment:
Q  88 atcgtgacacgattttggcatcgtgacacgatttcgtggtacg-tgagccaagtttgcaggatgccaaatcatggcacgatcttgggaaatcgtgacatg 186  Q
    |||||||||||| ||||||||||||||| ||||| | ||| |  ||||| | ||||||||| ||||||||| || ||||||||||||||||||||||| |    
T  1532947 atcgtgacacgaatttggcatcgtgacatgattttgaggtgccatgagcta-gtttgcagggtgccaaatcgtgacacgatcttgggaaatcgtgacacg 1533045  T
Q  187 attcagaaacttgctggttaagtatcactgataaggactggtca-acctggggaccgttgcagatcgtgacacaatctagggaaatcgtggcacgatttc 285  Q
    |||  ||||||| || ||||||||||  |||||||||||||| | |||| |||||     || |||||||||| ||||  |||||||||||||||||| |    
T  1533046 attgtgaaacttactcgttaagtatccttgataaggactggttataccttgggacatacacaaatcgtgacacgatct--ggaaatcgtggcacgattgc 1533143  T
Q  286 ttcagggcaggactagtatatattgtgttcttgt 319  Q
    ||||| | | | ||||||||||| ||||||||||    
T  1533144 ttcagaggaaggctagtatatatagtgttcttgt 1533177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 51 - 118
Target Start/End: Original strand, 1532891 - 1532958
Alignment:
Q  51 atttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacga 118  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1532891 atttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacga 1532958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 47264260 - 47264102
Alignment:
Q  51 atttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggat 149  Q
    |||||||||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||| ||  |  |||||| |  ||||| ||| |    
T  47264260 atttggcttcaaatttgtggtttggaagaatagagaaatcgtgacacgattttggcatcgtgacacgattttgtaatgtcgtgag-ctggtttgtagggt 47264162  T
Q  150 gccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagt 209  Q
    | |||||| |||||| ||  || |||||||||||| ||||   |||||||||||||||||    
T  47264161 gtcaaatcgtggcacaattgtgtgaaatcgtgacacgattttcaaacttgctggttaagt 47264102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 57 - 125
Target Start/End: Complemental strand, 1562575 - 1562507
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtg 125  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  1562575 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttggtatcgtgacacgatttcgtg 1562507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 25767533 - 25767381
Alignment:
Q  51 atttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggat 149  Q
    |||||||||||||||| ||||||||||      |||||||||||||| | ||||||||||||||||||||||||| | | ||||||   ||||||||| |    
T  25767533 atttggcttcaaatttgtggtctggaa------agaaatcgtgacacaaatttggcatcgtgacacgatttcgtgatgccgtgagctg-gtttgcagggt 25767441  T
Q  150 gccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagt 209  Q
    |||||||| || |||||| |||||||||||||||| ||||   ||||||||| |||||||    
T  25767440 gccaaatcgtgacacgattttgggaaatcgtgacacgattttcaaacttgctcgttaagt 25767381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 51 - 121
Target Start/End: Complemental strand, 2479953 - 2479883
Alignment:
Q  51 atttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 121  Q
    |||||||||||||||| |||| || |||||||||||||| |||||||||||||||||||||||||||||||    
T  2479953 atttggcttcaaatttgtggtttgtaagaacagagaaattgtgacacgattttggcatcgtgacacgattt 2479883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 51 - 121
Target Start/End: Original strand, 44847626 - 44847696
Alignment:
Q  51 atttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 121  Q
    |||||||||||||||| |||| |  ||||||||||||||||||||||||||||||||||||||||||||||    
T  44847626 atttggcttcaaatttgtggtttaaaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 44847696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 57 - 229
Target Start/End: Complemental strand, 18392768 - 18392596
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgccaaa 155  Q
    |||||||||| |||| ||||||||||| ||||||||| ||||||||||| |||||||||||| || | |||  ||||||| | | ||||||| ||| ||     
T  18392768 cttcaaatttgtggtttggaagaacagggaaatcgtgccacgattttggaatcgtgacacga-ttggaggtgccgtgagctagggttgcagggtgcaaat 18392670  T
Q  156 tcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    || || |||||| | || ||||||||||| |||   |||||||||| ||||||||||  |||||||||||||||    
T  18392669 tcgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 18392596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 21983858 - 21983790
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 121  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||   ||||||||||||||||    
T  21983858 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgatttcatcatcgtgacacgattt 21983790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 53 - 121
Target Start/End: Complemental strand, 21989522 - 21989454
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 121  Q
    |||||||||||||| |||| |||||||||||||||||||||||| |||||   ||||||||||||||||    
T  21989522 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacaagatttcatcatcgtgacacgattt 21989454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 268 - 324
Target Start/End: Original strand, 20357231 - 20357287
Alignment:
Q  268 aaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttt 324  Q
    |||||||||||||||| |||||| | | |||||||||||||||||||||||||||||    
T  20357231 aaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttt 20357287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 46515810 - 46515860
Alignment:
Q  53 ttggcttcaaatttatggtct-ggaagaacagagaaatcgtgacacgattt 102  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||||    
T  46515810 ttggcttcaaatttatggttttggaagaacagagaaatcgtgacacgattt 46515860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 80004 - 79955
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| || | ||||||||||||||||||||||||||||||    
T  80004 ttggcttcaaatttgtgatttggaagaacagagaaatcgtgacacgattt 79955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 345 - 397
Target Start/End: Complemental strand, 19992597 - 19992546
Alignment:
Q  345 agcttaagagagaaaaatttggaggtcagagaggggatcctatggggtgtgtt 397  Q
    |||||||||||||||| || |||||||| ||||||||||||||||||||||||    
T  19992597 agcttaagagagaaaactt-ggaggtcaaagaggggatcctatggggtgtgtt 19992546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 229
Target Start/End: Complemental strand, 1562479 - 1562403
Alignment:
Q  153 aaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    ||||| || |||||| |||| ||||||||||| |||   |||||||||| ||||||||||  |||||||||||||||    
T  1562479 aaatcgtgtcacgattttggtaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 1562403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 121
Target Start/End: Complemental strand, 4509369 - 4509335
Alignment:
Q  87 aatcgtgacacgattttggcatcgtgacacgattt 121  Q
    ||||||||||||||||||| |||||||||||||||    
T  4509369 aatcgtgacacgattttgggatcgtgacacgattt 4509335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 121
Target Start/End: Complemental strand, 4511211 - 4511177
Alignment:
Q  87 aatcgtgacacgattttggcatcgtgacacgattt 121  Q
    ||||||||||||||||||| |||||||||||||||    
T  4511211 aatcgtgacacgattttgggatcgtgacacgattt 4511177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 121
Target Start/End: Original strand, 6431467 - 6431501
Alignment:
Q  87 aatcgtgacacgattttggcatcgtgacacgattt 121  Q
    ||||||||||||||||||| |||||||||||||||    
T  6431467 aatcgtgacacgattttgggatcgtgacacgattt 6431501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 121
Target Start/End: Complemental strand, 14070382 - 14070348
Alignment:
Q  87 aatcgtgacacgattttggcatcgtgacacgattt 121  Q
    |||||||||||||||||||||||||| ||||||||    
T  14070382 aatcgtgacacgattttggcatcgtggcacgattt 14070348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 121
Target Start/End: Complemental strand, 14380410 - 14380376
Alignment:
Q  87 aatcgtgacacgattttggcatcgtgacacgattt 121  Q
    |||||||||||||||||||||||||| ||||||||    
T  14380410 aatcgtgacacgattttggcatcgtggcacgattt 14380376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 2647180 - 2647228
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    ||||||||||||||||||| | || ||||||||||||||| |||||||||    
T  2647180 ttggcttcaaatttatggttttga-gaacagagaaatcgtaacacgattt 2647228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 103
Target Start/End: Complemental strand, 49092282 - 49092237
Alignment:
Q  58 ttcaaatttatggtctggaagaacagagaaatcgtgacacgatttt 103  Q
    ||||||||| | || ||||||||||||||||| |||||||||||||    
T  49092282 ttcaaatttgtagtttggaagaacagagaaattgtgacacgatttt 49092237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 2575630 - 2575666
Alignment:
Q  8 ccttcaataggaaataccaaatatttcgcaaaatatg 44  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  2575630 ccttcaatagcaaataccaaatattttgcaaaatatg 2575666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 191; Significance: 1e-103; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 53 - 397
Target Start/End: Complemental strand, 19345001 - 19344657
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||| ||||||||||||| ||||||| | |||||| |  ||||||| |||||   | | | | ||||||||||||||| ||| ||    
T  19345001 ttggcttcaaatttgtggtttggaagaacagaggaatcgtgtcgcgatttggcaatcgtgatacgatcg-gagatgccgtgagccaagtttgctggaagc 19344903  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
     |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19344902 aaaatcatggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacctggggaccgttgcagatc 19344803  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaagagagcttaa 351  Q
     |||||| ||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||| | | ||||||||||||||||||||||    
T  19344802 atgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttggagataaccttaagagagcttaa 19344703  T
Q  352 gagagaaaaatttggaggtcagaga-ggggatcctatggggtgtgtt 397  Q
    ||||| |||| |||||| ||| ||| ||||||||| |||||||||||    
T  19344702 gagag-aaaacttggagatcaaagatggggatcctttggggtgtgtt 19344657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 53 - 324
Target Start/End: Original strand, 39811485 - 39811756
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |  || || ||| |||||||||||| ||    
T  39811485 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaagtgaccgtaagc-aagtttgcaggacgc 39811583  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||  ||| ||| ||||||||||||    
T  39811584 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggacttgtctgccttggggccgttgcagatc 39811683  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttt 324  Q
    ||||||| ||||||||||||||||||||||||||||||| | | |||||||||||||||||||||||||||||    
T  39811684 gtgacacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttt 39811756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 53 - 397
Target Start/End: Complemental strand, 19349859 - 19349515
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||| ||||||||| |||| ||||||||||||| ||||||| | | |||| |  |||||||||||||   | | | | ||||||||||||||| ||| ||    
T  19349859 ttggtttcaaatttgtggtttggaagaacagaggaatcgtgtcgcaatttggcaatcgtgacacgatcg-gagatgccgtgagccaagtttgctggaagc 19349761  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
     ||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||    
T  19349760 aaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgttggttaagtatctctgataaggactggtcaacctgaggaccgttgcagatc 19349661  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaagagagcttaa 351  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||  ||||||||||||||| | | ||||||||||||||||||||||    
T  19349660 gtgacacgatctagggaaatcgtggcacgatttcttcagggcaggactagtatttaaagtgttcttgtgcttttttggagataaccttaagagagcttaa 19349561  T
Q  352 gagagaaaaatttggaggtcagaga-ggggatcctatggggtgtgtt 397  Q
    ||||| |||| || ||| ||| ||| ||||||||| |||||||||||    
T  19349560 gagag-aaaacttagagatcaaagatggggatcctttggggtgtgtt 19349515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 53 - 396
Target Start/End: Complemental strand, 32247344 - 32247021
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||| | | |  |||||||||||||||| ||||||    
T  32247344 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgattt-gagatgccgtgagccaagtttgctggatgc 32247246  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
     ||||| ||||||                     |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  32247245 aaaatcgtggcac---------------------gattcagaaacttgctcgttaagtatcactgataaagactggtcaacctggggaccgttgcagatc 32247167  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgc--tttgtagaagataaccttaagagagctt 349  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||| | |||||||||||||||||| |||    
T  32247166 gtgacacgatctagggaaatcgtggcacgatttcttcaggggaggactagtatatattgtgttcttgtgcctttttttgaagataaccttaagagaactt 32247067  T
Q  350 aagagagaaaaatttggaggtcagagaggggatcctatggggtgtgt 396  Q
    ||||||| |||| |||||| ||| ||||||| |||||||||||||||    
T  32247066 aagagag-aaaacttggagatcaaagagggggtcctatggggtgtgt 32247021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 148; E-Value: 5e-78
Query Start/End: Original strand, 53 - 321
Target Start/End: Complemental strand, 14292117 - 14291850
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| | |||||| | |||||||||| ||    
T  14292117 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatctcgaggtgccgtgagcta-gtttgcaggacgc 14292019  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtca-acctggggaccgttgcagat 250  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||||||||||||||| |||| |||      ||| ||    
T  14292018 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtaccactgataaggactggtcataccttgggttgtacgcaaat 14291919  T
Q  251 cgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgc 321  Q
    |||||||| ||||  ||||||||||||||||||||||||| | | ||||||||||||||||||||||||||    
T  14291918 cgtgacacgatct--ggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 14291850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 53 - 321
Target Start/End: Original strand, 11098395 - 11098662
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||  |||||| | ||||||||||| ||    
T  11098395 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatagtgacacgatttcaaggtgccgtgag-ctagtttgcaggacgc 11098493  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc-aacctggggaccgttgcagat 250  Q
    |||||| |||||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||||| ||||| |||      ||| ||    
T  11098494 caaatcgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtatcactgataaggactggtcaaaccttgggttgtacgcaaat 11098593  T
Q  251 cgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgc 321  Q
    |||||||| ||||  ||||||||||||||||||||||||| | | |||||| |||||||||||||||||||    
T  11098594 cgtgacacgatct--ggaaatcgtggcacgatttcttcagaggaagactagcatatattgtgttcttgtgc 11098662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 53 - 324
Target Start/End: Original strand, 9295870 - 9296140
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||  |||||| | ||||||||||||||    
T  9295870 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcaaggtgccgtgag-ctagtttgcaggatgc 9295968  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtca-acctggggaccgttgcagat 250  Q
    |||||| |||||||||||||||||||||||||| ||||||||||||||||  |||||||||  |||||||||||||||| |||| ||| | |  ||| ||    
T  9295969 caaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgataaggactggtcataccttgggtcggacgcaaat 9296068  T
Q  251 cgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttt 324  Q
    |||||||| ||||  | |||||||| ||||||| |||||| | | ||||||||| ||  |||||||||||||||    
T  9296069 cgtgacacgatct--gaaaatcgtgacacgattgcttcagaggaagactagtatttaaagtgttcttgtgcttt 9296140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 52 - 229
Target Start/End: Complemental strand, 25410258 - 25410081
Alignment:
Q  52 tttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatg 150  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |  ||||||    ||||||||| ||    
T  25410258 tttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgag-atggtttgcagggtg 25410160  T
Q  151 ccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    ||||||| || ||||||||||||||||||||||| ||||   ||||||||| ||||||||||  ||||||||| |||||    
T  25410159 ccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggaatggtc 25410081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 50 - 209
Target Start/End: Complemental strand, 3492371 - 3492212
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    ||||||||||||||||| ||||||| |||||||||||||| ||||||||| ||||||||||||||||||||| ||| |  |||||| |  |||||||||     
T  3492371 gatttggcttcaaatttgtggtctgaaagaacagagaaattgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgag-ctggtttgcaggg 3492273  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagt 209  Q
    ||||||||| || ||||||||||||||||||||||| ||||| |||||||||| |||||||    
T  3492272 tgccaaatcgtgacacgatcttgggaaatcgtgacacgattctgaaacttgctcgttaagt 3492212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 50 - 229
Target Start/End: Original strand, 32289154 - 32289333
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |  |||||| |  |||||||||     
T  32289154 gatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattttgtgatgccgtgag-ctggtttgcaggg 32289252  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    ||||||||| || |||||||||| | |||||||||| ||||   ||||||||| ||||||| ||  |||||||||||||||    
T  32289253 tgccaaatcttgacacgatcttgaggaatcgtgacacgatttgaaaacttgctcgttaagtttccatgataaggactggtc 32289333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 50 - 209
Target Start/End: Original strand, 30832927 - 30833086
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| || |||| |||||||||||||||||||| |  |||||| |  |||||||||     
T  30832927 gatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacatgaatttgacatcgtgacacgatttcgtgatgccgtgag-ctggtttgcaggg 30833025  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagt 209  Q
    ||||||||| || ||||||||||||||||||||||| ||||   ||||||||| |||||||    
T  30833026 tgccaaatcgtgacacgatcttgggaaatcgtgacacgattttcaaacttgctcgttaagt 30833086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 57 - 229
Target Start/End: Complemental strand, 4484910 - 4484738
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgccaaa 155  Q
    |||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |  |||||| | |||||||||| |||||||    
T  4484910 cttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgag-ctagtttgcagggtgccaaa 4484812  T
Q  156 tcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    || || |||||||||  | |||||||||| ||||   ||||||||| ||||||| ||  |||||||||||||||    
T  4484811 tcgtgacacgatcttaaggaatcgtgacacgatttgcaaacttgctcgttaagtttctatgataaggactggtc 4484738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 57 - 229
Target Start/End: Complemental strand, 12647955 - 12647783
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgccaaat 156  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||     ||||||| | | |||||||    |||||    
T  12647955 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttgcaggggtgcaaat 12647856  T
Q  157 catggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    | |||||||||  ||||||||||||||| ||| || ||||||||| ||||||||||  |||||||||||||||    
T  12647855 cgtggcacgattgtgggaaatcgtgacacgatccataaacttgctcgttaagtatccttgataaggactggtc 12647783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 53 - 122
Target Start/End: Original strand, 44310479 - 44310548
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 122  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44310479 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc 44310548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 50 - 229
Target Start/End: Original strand, 6266280 - 6266459
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    |||||| |||||||||| |||||||||||||||  ||||||||||||||| |||| ||||||||||| |||||||| |  |||||| |  |||||||||     
T  6266280 gatttgtcttcaaatttgtggtctggaagaacatggaaatcgtgacacgaatttgacatcgtgacacaatttcgtgatgccgtgag-ctggtttgcaggg 6266378  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    ||||||||| || ||||||  ||||||||||||||| ||||   |||||| || ||||||| ||  ||||||||| |||||    
T  6266379 tgccaaatcgtgacacgattgtgggaaatcgtgacacgatttgcaaacttactcgttaagtttccatgataaggaatggtc 6266459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 50 - 209
Target Start/End: Complemental strand, 40739451 - 40739292
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    ||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||||| ||  |  |||||| |  |||||||||     
T  40739451 gatttggcttcaaatttgtggtctggaagaacagacaaatcgtgacacgaatttggcatcgtgacacgattttgttatgccgtgag-ctggtttgcaggg 40739353  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagt 209  Q
    ||||||||| || |||||||||| | ||| ||||||  |||   ||||||||| |||||||    
T  40739352 tgccaaatcgtgacacgatcttgtggaattgtgacacaattttcaaacttgctcgttaagt 40739292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 8389632 - 8389681
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  8389632 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 8389681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 104
Target Start/End: Original strand, 28258676 - 28258729
Alignment:
Q  51 atttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttg 104  Q
    |||||||||||||||| |||| ||||| ||||||||||||||||||||||||||    
T  28258676 atttggcttcaaatttgtggtttggaaaaacagagaaatcgtgacacgattttg 28258729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 36757426 - 36757477
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttg 104  Q
    |||||||||||||| |||| |||||||||||| |||||||||||||||||||    
T  36757426 ttggcttcaaatttgtggtttggaagaacagaaaaatcgtgacacgattttg 36757477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 10706734 - 10706783
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| | || ||||||||||||||||||||||||||||||    
T  10706734 ttggcttcaaatttgttgtttggaagaacagagaaatcgtgacacgattt 10706783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 21630560 - 21630511
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| | || ||||||||||||||||||||||||||||||    
T  21630560 ttggcttcaaatttgtagtttggaagaacagagaaatcgtgacacgattt 21630511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 23077953 - 23078002
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    ||||||||||| || |||| ||||||||||||||||||||||||||||||    
T  23077953 ttggcttcaaaattttggtttggaagaacagagaaatcgtgacacgattt 23078002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 33528106 - 33528155
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| |||| ||||||||||||||||||||||||| ||||    
T  33528106 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacaattt 33528155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 39483492 - 39483443
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| |||| ||||||||||||||||| ||||||||||||    
T  39483492 ttggcttcaaatttgtggtttggaagaacagagaaattgtgacacgattt 39483443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 53 - 96
Target Start/End: Complemental strand, 20522837 - 20522794
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgaca 96  Q
    |||||||||||||| |||| ||||||||||||||||||||||||    
T  20522837 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgaca 20522794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 139 - 209
Target Start/End: Original strand, 28258745 - 28258815
Alignment:
Q  139 gtttgcaggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagt 209  Q
    ||||||||| || |||||| |||||| || ||| |||||||||||| ||||   |||||||||||||||||    
T  28258745 gtttgcagggtgtcaaatcgtggcacaattttgtgaaatcgtgacacgattttcaaacttgctggttaagt 28258815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 65 - 121
Target Start/End: Complemental strand, 17865781 - 17865725
Alignment:
Q  65 ttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 121  Q
    ||||||| |||||||| ||||||||||||||| |||||   ||||||| ||||||||    
T  17865781 ttatggtttggaagaatagagaaatcgtgacatgatttcatcatcgtgtcacgattt 17865725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 175; Significance: 4e-94; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 53 - 324
Target Start/End: Original strand, 3345 - 3616
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc--gtggtacgtgagccaagtttgcaggatg 150  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||  ||||  ||||||| | ||||| |||| |    
T  3345 ttggcttcaaatttgtggtctggaagaaaagagaaatcgtgacacgattttgacatcgtgacacgatttcaagtggc-cgtgagcta-gtttgaaggacg 3442  T
Q  151 ccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagat 250  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  3443 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcaatgataaggactagtcaacctggggaccgttgcagat 3542  T
Q  251 cgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgcttt 324  Q
    |||||||| ||||||| |||||||| |||||||||||||||| | |||||||||||||||| ||||||||||||    
T  3543 cgtgacacgatctaggaaaatcgtgacacgatttcttcaggggaagactagtatatattgtattcttgtgcttt 3616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 164; Significance: 2e-87; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 53 - 349
Target Start/End: Original strand, 34562 - 34858
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc--gtggtacgtgagccaagtttgcaggatg 150  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||  ||| ||    ||||||| || |    
T  34562 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacactatttcaagtggc-cgttagttt-gtttgcatgacg 34659  T
Q  151 ccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagat 250  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||| |||| ||| |||||||||||    
T  34660 ccaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtctaccttgggtccgttgcagat 34759  T
Q  251 cgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaagagagctt 349  Q
    |||||||| |||||||||||||||||||| |||||||||| | | |||||||||||||||||||||| |||||| | ||||  || |||||||||||||    
T  34760 cgtgacacgatctagggaaatcgtggcactatttcttcagaggaagactagtatatattgtgttcttttgcttttttgaagtgaatcttaagagagctt 34858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 163; Significance: 6e-87; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 45 - 343
Target Start/End: Original strand, 1739 - 2037
Alignment:
Q  45 tgttggatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgc 144  Q
    ||||||| ||| |||||||||  |||| ||||||||||||| ||||||| |||||||| |  |||||||||||||   |  |   |||||||||||||||    
T  1739 tgttggaattgacttcaaattagtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggggaggcagtgagccaagtttgc 1838  T
Q  145 aggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgtt 244  Q
     ||| || ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||    
T  1839 tggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtcaaccttgggaccgtt 1938  T
Q  245 gcagatcgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaaga 343  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||  | |||| |||||||||||    
T  1939 gcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcttatttgaaggtaaccttaaga 2037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 163; Significance: 6e-87; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 45 - 343
Target Start/End: Original strand, 148444 - 148742
Alignment:
Q  45 tgttggatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgc 144  Q
    ||||||| ||| |||||||||  |||| ||||||||||||| ||||||| |||||||| |  |||||||||||||   |  |   |||||||||||||||    
T  148444 tgttggaattgacttcaaattagtggtttggaagaacagaggaatcgtgtcacgatttggcaatcgtgacacgatcggggaggcagtgagccaagtttgc 148543  T
Q  145 aggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgtt 244  Q
     ||| || ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||    
T  148544 tggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtcaaccttgggaccgtt 148643  T
Q  245 gcagatcgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaaga 343  Q
    |||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||||  | |||| |||||||||||    
T  148644 gcagatcgtgacacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcttatttgaaggtaaccttaaga 148742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 158; Significance: 6e-84; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 158; E-Value: 6e-84
Query Start/End: Original strand, 53 - 397
Target Start/End: Original strand, 18672 - 19015
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttc-gtggtacgtgagccaagtttgcaggatgc 151  Q
    |||||||||||||| |||| ||| ||||||||| ||||||| | |||||| |  |||||||||||||    | || | |||||| |||||||| ||| ||    
T  18672 ttggcttcaaatttgtggtttgggagaacagaggaatcgtgtcgcgatttggcaatcgtgacacgatcggagaggca-gtgagctaagtttgctggaagc 18770  T
Q  152 caaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatc 251  Q
     ||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||| |||    
T  18771 aaaatcgtgccacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaagactggtcatcctggggaccgttgcaaatc 18870  T
Q  252 gtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaagagagcttaa 351  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||| ||| ||  ||||||||||||||| | ||||| |||||| ||||| |||||    
T  18871 gtgacacgatctaaggaaatcgtggcacgatttcttcagggcaggactaatatttaaagtgttcttgtgcttttttgaagacaaccttgagagaacttaa 18970  T
Q  352 gagagaaaaatttggaggtcagagaggggatcctatggggtgtgtt 397  Q
    ||||| |||| |||||| ||| ||| |||||||| |||||||||||    
T  18971 gagag-aaaacttggagatcaaagatgggatcctttggggtgtgtt 19015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 45 - 345
Target Start/End: Original strand, 13784 - 14084
Alignment:
Q  45 tgttggatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgc 144  Q
    ||||||| ||| |||||||||  |||| ||| ||||||||| ||||||| ||||||||||   ||||||||||||   |  |   |||||| ||||||||    
T  13784 tgttggaattgacttcaaattagtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgatcagggaggcagtgagctaagtttgc 13883  T
Q  145 aggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgtt 244  Q
     ||| || ||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||    
T  13884 tggaagcaaaatcgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaacttggggaccgtt 13983  T
Q  245 gcagatcgtgacacaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgctttgtagaagataaccttaagag 344  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||| ||  ||||||||||||| | | |||| ||||||||||||    
T  13984 gcagatcgtgacacgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgctcttttgaaggtaaccttaagag 14083  T
Q  345 a 345  Q
    |    
T  14084 a 14084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 134; Significance: 1e-69; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 57 - 322
Target Start/End: Original strand, 176462 - 176727
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgccaaat 156  Q
    |||||||||  |||| ||| ||||||||| ||||||| ||||||||||   ||||||||||||   |  |   |||||| |||||||| ||| || ||||    
T  176462 cttcaaattagtggtttgggagaacagaggaatcgtgtcacgattttgcagtcgtgacacgatcagggaggcagtgagctaagtttgctggaagcaaaat 176561  T
Q  157 catggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggggaccgttgcagatcgtgac 256  Q
    | |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||||    
T  176562 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcaactttgggtccgttgcagatcgtgac 176661  T
Q  257 acaatctagggaaatcgtggcacgatttcttcagggcaggactagtatatattgtgttcttgtgct 322  Q
    || |||||||||||||||||||||||||| ||||| |||||||||||| ||  |||||||||||||    
T  176662 acgatctagggaaatcgtggcacgatttcctcaggacaggactagtatttaaagtgttcttgtgct 176727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 101; Significance: 6e-50; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 50 - 229
Target Start/End: Original strand, 17437 - 17616
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |  |||||| |  |||||||||     
T  17437 gatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgag-ctggtttgcaggg 17535  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    ||||||||| || ||||||||||||||||||||||||||||   ||||||||| ||||||||||  ||||||||| |||||    
T  17536 tgccaaatcgtgacacgatcttgggaaatcgtgacatgattttcaaacttgctcgttaagtatccttgataaggattggtc 17616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 50 - 229
Target Start/End: Original strand, 21945 - 22124
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtac-gtgagccaagtttgcagga 148  Q
    ||||||| ||||||||| |||||||||||||||||||||||| |||| || ||||||||||||||||||||||| ||| | |||||| | ||||||||||    
T  21945 gatttggtttcaaatttgtggtctggaagaacagagaaatcgggacatgaatttggcatcgtgacacgatttcgaggtgccgtgagcta-gtttgcagga 22043  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
     |||||||| || ||||||||||||||||||||||| ||||   ||||||||| |||||||||||||||||||||| ||||    
T  22044 cgccaaatcgtgacacgatcttgggaaatcgtgacacgattgtaaaacttgctcgttaagtatcactgataaggacaggtc 22124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 85; Significance: 2e-40; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 50 - 229
Target Start/End: Complemental strand, 9302 - 9124
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |  |||||| |  |||||||||     
T  9302 gatttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgag-ctggtttgcaggg 9204  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    ||||||||| || || ||| |||||||||||||||| ||||   ||||||||| ||||||| ||  |||||||||||||||    
T  9203 tgccaaatcgtgacatgat-ttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 9124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 81; E-Value: 5e-38
Query Start/End: Original strand, 50 - 229
Target Start/End: Complemental strand, 11747 - 11569
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    |||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||||| || |  |||||| |  |||||||||     
T  11747 gatttggcttcaaaattgtggtctggaagaacagagaaatcgtgacacgaatttggcatcgtgacacgatttcatgatgccgtgag-ctggtttgcaggg 11649  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    ||||||||| || |||||| |||||||||||||||| ||||   ||||||||| ||||||| ||  |||||||||||||||    
T  11648 tgccaaatcgtgacacgat-ttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtc 11569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 77; Significance: 1e-35; HSPs: 2)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 138 - 246
Target Start/End: Complemental strand, 8199 - 8091
Alignment:
Q  138 agtttgcaggatgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtcaacctggg 237  Q
    ||||||||||| |||||||| |||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||| |||||||| ||    
T  8199 agtttgcaggacgccaaatcgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtcaaccttgg 8100  T
Q  238 gaccgttgc 246  Q
    | |||||||    
T  8099 gtccgttgc 8091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 8265 - 8216
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||    
T  8265 ttggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattt 8216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 57 - 229
Target Start/End: Complemental strand, 3173 - 3001
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgccaaat 156  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||||||||||     ||||||| | | |||||||    |||||    
T  3173 cttcaaatttgtggtctggaagaacagggaaatcgtgacacgattttgggatcgtgacacgatttcggatgccgtgagctagggttgcaggggtgcaaat 3074  T
Q  157 catggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    | |||||||||  ||||||||||||||| ||| |||||||||||| |||||||||   |||||||||||||||    
T  3073 cgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtattcttgataaggactggtc 3001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 57 - 229
Target Start/End: Complemental strand, 4298 - 4126
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggtacgtgagccaagtttgcaggatgccaaat 156  Q
    |||||||||| |||||||||||||||| ||||||||| ||||||||||| |||||||||||||||   |   ||||||| | | |||||||    |||||    
T  4298 cttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggaatcgtgacacgattttaggtgccgtgagctagggttgcaggggtgcaaat 4199  T
Q  157 catggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    | |||||||||  ||||||||||||||| ||| |||||||||||| ||||||||||  |||||||||||||||    
T  4198 cgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtc 4126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 68; Significance: 3e-30; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 51 - 209
Target Start/End: Original strand, 43441 - 43599
Alignment:
Q  51 atttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggat 149  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||||| ||  |  |||||| |  |||| |||| |    
T  43441 atttggcttcaaatttatggtttggaagaatagagaaatcgtgacacgattgtggcatcgtgacacgattttgtaatgtcgtgag-ctggtttacagggt 43539  T
Q  150 gccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagt 209  Q
    | |||||| ||| ||||| ||| |||||||||||||||||   |||||||||||||||||    
T  43540 gtcaaatcgtggtacgattttgtgaaatcgtgacatgattttcaaacttgctggttaagt 43599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 36333 - 36384
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttg 104  Q
    |||||||||||||| |||| |||||||||||||||||| ||| |||||||||    
T  36333 ttggcttcaaatttgtggtttggaagaacagagaaatcatgatacgattttg 36384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 43 - 120
Target Start/End: Original strand, 1707 - 1784
Alignment:
Q  43 tgtgttggatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatt 120  Q
    ||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1707 tgtgttgaaattggcttcaaatttgtggtctggaagaacagagaaatcgtgacacgattttggaatcgtgacacgatt 1784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 42 - 121
Target Start/End: Original strand, 7908 - 7988
Alignment:
Q  42 atgtgttg-gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgattt 121  Q
    |||||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  7908 atgtgttgagatttggcttcaaatttgtggtctgaaagaacagagaaatcgtgacacgaatttggcatcgtgacacgattt 7988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 51 - 209
Target Start/End: Original strand, 1090 - 1248
Alignment:
Q  51 atttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggta-cgtgagccaagtttgcaggat 149  Q
    ||||| |||||||||| |||| || ||||||||| |||||||||||||||||||||||||||||||||||| ||  || ||||||    ||||||||| |    
T  1090 atttgccttcaaatttgtggtttgaaagaacagaaaaatcgtgacacgattttggcatcgtgacacgattttgtaatatcgtgag-ttggtttgcagggt 1188  T
Q  150 gccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagt 209  Q
    | |||||| ||| ||||| ||| |||||||||||| ||||   |||||||||||||||||    
T  1189 gtcaaatcgtggtacgattttgtgaaatcgtgacacgatttttaaacttgctggttaagt 1248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 57; Significance: 1e-23; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 50 - 209
Target Start/End: Original strand, 132758 - 132917
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcagga 148  Q
    |||||| |||||||||| |||| ||||||||||||||||||||||||||||| ||| |||||| |||||||| ||| |  |||||| |  ||||||||      
T  132758 gatttgtcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattgtggtatcgtggcacgattttgtgatgtcgtgag-ctggtttgcagtg 132856  T
Q  149 tgccaaatcatggcacgatcttgggaaatcgtgacatgattcagaaacttgctggttaagt 209  Q
    || |||||| || |||||| ||| | |||||||||||||||   |||||||||||||||||    
T  132857 tgtcaaatcgtgacacgattttgtggaatcgtgacatgattttcaaacttgctggttaagt 132917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 6301 - 6252
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||||    
T  6301 ttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacgattt 6252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 3109 - 3060
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| |||| |||||||||||||||||| |||||||||||    
T  3109 ttggcttcaaatttgtggtttggaagaacagagaaatcatgacacgattt 3060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 149650 - 149601
Alignment:
Q  53 ttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattt 102  Q
    |||||||||||||| |||| ||||  |||||||||||||||||| |||||    
T  149650 ttggcttcaaatttgtggtttggagaaacagagaaatcgtgacatgattt 149601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 54; Significance: 7e-22; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 81 - 189
Target Start/End: Original strand, 519 - 627
Alignment:
Q  81 cagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgccaaatcatggcacgatcttgggaaatcg 179  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |  |||||| | |||||||||| ||||||||| || |||||||||| | |||||    
T  519 cagagaaatcgtgacacgaatttggcatcgtgacacgatttcgtgatgccgtgag-ctagtttgcagggtgccaaatcgtgacacgatcttgaggaatcg 617  T
Q  180 tgacatgatt 189  Q
    ||||| ||||    
T  618 tgacacgatt 627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 57 - 229
Target Start/End: Original strand, 5871 - 6044
Alignment:
Q  57 cttcaaatttatggtctggaagaacagagaaatcgtgacacgattttggcatcgtgacacgatttcgtggt-acgtgagccaagtttgcaggatgccaaa 155  Q
    |||||||||| |||||||||||||||| ||||||||| |||||||||||  ||||||||||| || | |||  ||||||| | | ||||||| ||| ||     
T  5871 cttcaaatttgtggtctggaagaacagggaaatcgtgccacgattttggagtcgtgacacga-ttggaggtgccgtgagctagggttgcagggtgcaaat 5969  T
Q  156 tcatggcacgatcttgg-gaaatcgtgacatgattcagaaacttgctggttaagtatcactgataaggactggtc 229  Q
    || || ||||||  |||  ||||||||||| |||   |||||||||| ||||||||||  |||||||||||||||    
T  5970 tcgtgtcacgattgtggcaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtc 6044  T

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Target: scaffold0098 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 50 - 104
Target Start/End: Complemental strand, 45798 - 45744
Alignment:
Q  50 gatttggcttcaaatttatggtctggaagaacagagaaatcgtgacacgattttg 104  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||    
T  45798 gatttggcttcaaatttgtggtttggaagaacagagaaatcgtgacacaattttg 45744  T

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Target: scaffold0466 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 87 - 121
Target Start/End: Original strand, 6750 - 6784
Alignment:
Q  87 aatcgtgacacgattttggcatcgtgacacgattt 121  Q
    |||||||||||||||||||||||||| ||||||||    
T  6750 aatcgtgacacgattttggcatcgtggcacgattt 6784  T

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Target: scaffold0036 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 53 - 102
Target Start/End: Complemental strand, 86203 - 86153
Alignment:
Q  53 ttggcttcaaattta-tggtctggaagaacagagaaatcgtgacacgattt 102  Q
    ||||||||||||||  |||| |||||||| |||||||||||||||||||||    
T  86203 ttggcttcaaattttgtggtttggaagaatagagaaatcgtgacacgattt 86153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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