View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5183_high_30 (Length: 236)
Name: NF5183_high_30
Description: NF5183
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5183_high_30 |
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Alignment Details
Target: chr7 (Bit Score: 169; Significance: 9e-91; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 37964739 - 37964919
Alignment:
| Q |
1 |
atggaatacagttttcaaaggtttatgagatctaagatactagtaacaattataaaatgcttttaattttttaaagcagaaaaagatacaaacaaaggac |
100 |
Q |
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| T |
37964739 |
atggaatacagttttcaaaggtttatgagatctaagatactagtaacaattataaaatgcttttaattttttaaagcagaaaaagatacaaacaaaggac |
37964838 |
T |
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| Q |
101 |
aacttaaagagaattctagagtgttatagtgatataaacataagtgcttattgttc-aacaagttctacacaagtaattct |
180 |
Q |
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| T |
37964839 |
aacttaaagagaattctagagtgttatagtgatataaacatatgtgcttattgttctaacaagttctacacaagtaattct |
37964919 |
T |
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