View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5183_low_29 (Length: 238)

Name: NF5183_low_29
Description: NF5183
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5183_low_29
NF5183_low_29
[»] chr1 (56 HSPs)
chr1 (20-165)||(39776418-39776563)
chr1 (162-219)||(15034763-15034820)
chr1 (164-219)||(23536067-23536122)
chr1 (162-219)||(24273238-24273295)
chr1 (162-219)||(30190240-30190297)
chr1 (162-219)||(34756425-34756482)
chr1 (164-219)||(4038075-4038130)
chr1 (164-219)||(15034659-15034714)
chr1 (164-219)||(26501097-26501152)
chr1 (161-219)||(6470704-6470762)
chr1 (164-218)||(8224768-8224822)
chr1 (162-219)||(4038179-4038236)
chr1 (162-219)||(45565392-45565449)
chr1 (168-219)||(27804269-27804320)
chr1 (161-219)||(47165230-47165288)
chr1 (166-219)||(40264134-40264187)
chr1 (167-219)||(37036967-37037019)
chr1 (164-212)||(43623003-43623051)
chr1 (164-219)||(29446750-29446805)
chr1 (164-219)||(32287951-32288006)
chr1 (165-219)||(32573026-32573080)
chr1 (166-219)||(28632603-28632656)
chr1 (166-219)||(28745799-28745852)
chr1 (162-219)||(44410309-44410366)
chr1 (166-219)||(50005183-50005236)
chr1 (164-219)||(27804369-27804424)
chr1 (164-219)||(27935589-27935644)
chr1 (164-219)||(38277415-38277470)
chr1 (164-219)||(44410415-44410470)
chr1 (173-219)||(44570687-44570733)
chr1 (164-217)||(31166310-31166363)
chr1 (162-199)||(32572938-32572975)
chr1 (166-219)||(34756531-34756584)
chr1 (173-218)||(37448420-37448465)
chr1 (166-219)||(38277519-38277571)
chr1 (164-204)||(5474417-5474457)
chr1 (164-199)||(15245460-15245495)
chr1 (164-219)||(50005079-50005134)
chr1 (161-199)||(32128045-32128083)
chr1 (164-218)||(49659217-49659270)
chr1 (167-209)||(51847855-51847897)
chr1 (162-199)||(23536173-23536210)
chr1 (162-199)||(37214924-37214961)
chr1 (162-199)||(48953585-48953622)
chr1 (162-218)||(946374-946429)
chr1 (164-216)||(10166499-10166551)
chr1 (163-219)||(32652205-32652261)
chr1 (171-219)||(37447920-37447968)
chr1 (164-199)||(40264048-40264083)
chr1 (164-199)||(41823180-41823215)
chr1 (164-199)||(50471768-50471803)
chr1 (161-199)||(17502286-17502324)
chr1 (169-219)||(28745900-28745950)
chr1 (180-218)||(52280972-52281010)
chr1 (162-199)||(34007356-34007393)
chr1 (163-219)||(32647300-32647356)
[»] chr4 (56 HSPs)
chr4 (161-219)||(49111416-49111474)
chr4 (161-219)||(31473846-31473904)
chr4 (162-219)||(857343-857400)
chr4 (162-219)||(15660287-15660344)
chr4 (162-219)||(36455905-36455962)
chr4 (162-218)||(14982278-14982334)
chr4 (164-219)||(7352916-7352971)
chr4 (165-219)||(4441338-4441392)
chr4 (162-219)||(2125855-2125912)
chr4 (162-219)||(4896646-4896703)
chr4 (166-219)||(7352814-7352867)
chr4 (162-219)||(10128078-10128135)
chr4 (162-219)||(11348341-11348398)
chr4 (161-218)||(16516168-16516225)
chr4 (162-219)||(28845975-28846032)
chr4 (167-219)||(10633035-10633087)
chr4 (164-219)||(1112605-1112660)
chr4 (161-219)||(1107156-1107214)
chr4 (166-219)||(4896736-4896789)
chr4 (164-213)||(31742874-31742923)
chr4 (172-219)||(1539649-1539696)
chr4 (164-219)||(15660183-15660238)
chr4 (164-219)||(36456030-36456085)
chr4 (164-219)||(41498594-41498649)
chr4 (169-219)||(28845876-28845926)
chr4 (162-219)||(5715742-5715799)
chr4 (162-219)||(11040966-11041022)
chr4 (162-219)||(35470120-35470177)
chr4 (166-211)||(42542979-42543024)
chr4 (164-219)||(42844543-42844598)
chr4 (161-199)||(26251015-26251053)
chr4 (166-216)||(42844650-42844700)
chr4 (161-219)||(55266879-55266937)
chr4 (162-219)||(1112726-1112783)
chr4 (166-219)||(10127976-10128029)
chr4 (166-219)||(26250911-26250964)
chr4 (162-213)||(467912-467962)
chr4 (161-219)||(41498486-41498545)
chr4 (166-219)||(31742778-31742831)
chr4 (166-199)||(42775625-42775658)
chr4 (162-199)||(53760810-53760847)
chr4 (163-199)||(47108317-47108353)
chr4 (164-199)||(14982385-14982420)
chr4 (165-195)||(4441438-4441468)
chr4 (164-218)||(52493926-52493978)
chr4 (161-199)||(56339148-56339186)
chr4 (166-219)||(19461754-19461807)
chr4 (162-195)||(32724928-32724961)
chr4 (166-199)||(46243115-46243148)
chr4 (166-199)||(52295065-52295098)
chr4 (191-219)||(857266-857294)
chr4 (164-219)||(1107051-1107107)
chr4 (191-219)||(29091164-29091192)
chr4 (164-219)||(31947590-31947648)
chr4 (164-219)||(41139475-41139528)
chr4 (164-212)||(42776637-42776685)
[»] chr3 (51 HSPs)
chr3 (161-219)||(46672820-46672878)
chr3 (164-219)||(49457343-49457398)
chr3 (162-219)||(36398006-36398063)
chr3 (162-219)||(44692820-44692877)
chr3 (162-219)||(47767430-47767487)
chr3 (159-219)||(9129448-9129508)
chr3 (159-219)||(9137555-9137615)
chr3 (164-219)||(27251998-27252053)
chr3 (164-219)||(44436258-44436313)
chr3 (164-219)||(44692926-44692981)
chr3 (164-218)||(42005971-42006025)
chr3 (162-219)||(37054392-37054449)
chr3 (164-219)||(5415783-5415838)
chr3 (168-219)||(21307549-21307600)
chr3 (168-218)||(35279920-35279970)
chr3 (162-219)||(28092212-28092269)
chr3 (164-219)||(671636-671691)
chr3 (164-219)||(5415887-5415942)
chr3 (164-219)||(7302346-7302401)
chr3 (164-219)||(34088571-34088626)
chr3 (164-219)||(53129860-53129915)
chr3 (162-219)||(46429500-46429557)
chr3 (162-219)||(47284330-47284387)
chr3 (162-219)||(48947603-48947660)
chr3 (162-219)||(53470446-53470503)
chr3 (164-219)||(9129344-9129399)
chr3 (164-219)||(9137451-9137506)
chr3 (180-219)||(31070422-31070461)
chr3 (164-219)||(46001364-46001419)
chr3 (161-219)||(31189414-31189472)
chr3 (161-219)||(37321547-37321605)
chr3 (162-219)||(30767102-30767159)
chr3 (162-219)||(39110392-39110449)
chr3 (166-219)||(42130694-42130747)
chr3 (162-199)||(46429412-46429449)
chr3 (161-208)||(2732636-2732683)
chr3 (172-219)||(19475824-19475871)
chr3 (160-219)||(46635853-46635912)
chr3 (162-199)||(25655313-25655350)
chr3 (166-199)||(27485474-27485507)
chr3 (182-219)||(30766571-30766608)
chr3 (162-219)||(31070510-31070567)
chr3 (170-219)||(44288476-44288525)
chr3 (167-207)||(52527039-52527079)
chr3 (164-199)||(37321622-37321657)
chr3 (164-199)||(54761583-54761618)
chr3 (164-193)||(9007480-9007509)
chr3 (162-199)||(27251910-27251947)
chr3 (162-199)||(47284222-47284259)
chr3 (168-212)||(47336885-47336929)
chr3 (181-213)||(50168633-50168665)
[»] chr6 (20 HSPs)
chr6 (162-219)||(9285645-9285702)
chr6 (162-219)||(34244998-34245055)
chr6 (164-219)||(6919811-6919866)
chr6 (162-219)||(8574693-8574750)
chr6 (162-219)||(29889452-29889509)
chr6 (164-219)||(8574769-8574824)
chr6 (161-219)||(13487272-13487330)
chr6 (166-219)||(6919710-6919763)
chr6 (166-219)||(9763014-9763067)
chr6 (164-219)||(9763116-9763171)
chr6 (164-219)||(28918165-28918220)
chr6 (161-204)||(33733429-33733472)
chr6 (161-219)||(15299529-15299586)
chr6 (162-219)||(776078-776135)
chr6 (162-219)||(1368475-1368532)
chr6 (164-219)||(776184-776239)
chr6 (164-197)||(1195351-1195384)
chr6 (164-199)||(8475179-8475214)
chr6 (168-219)||(15832470-15832521)
chr6 (177-219)||(15299412-15299454)
[»] chr2 (48 HSPs)
chr2 (162-219)||(41461619-41461676)
chr2 (164-219)||(14365700-14365755)
chr2 (162-219)||(14365803-14365860)
chr2 (168-219)||(11684603-11684654)
chr2 (164-219)||(14537199-14537254)
chr2 (164-219)||(17180297-17180352)
chr2 (164-219)||(27033490-27033545)
chr2 (161-219)||(784897-784955)
chr2 (162-219)||(1583827-1583884)
chr2 (162-219)||(11716406-11716463)
chr2 (164-219)||(769036-769091)
chr2 (164-219)||(10480119-10480174)
chr2 (164-219)||(11141305-11141360)
chr2 (172-219)||(11716503-11716550)
chr2 (164-219)||(33189275-33189330)
chr2 (166-219)||(11532271-11532324)
chr2 (166-219)||(11793897-11793950)
chr2 (162-219)||(35047697-35047754)
chr2 (167-219)||(28740599-28740651)
chr2 (162-218)||(45094490-45094546)
chr2 (172-219)||(30698289-30698336)
chr2 (164-218)||(7228031-7228085)
chr2 (162-219)||(10244175-10244232)
chr2 (162-219)||(13017777-13017834)
chr2 (166-218)||(41461517-41461569)
chr2 (164-219)||(3092282-3092337)
chr2 (164-219)||(39630225-39630280)
chr2 (164-218)||(784793-784847)
chr2 (162-199)||(14537305-14537342)
chr2 (166-219)||(44256211-44256263)
chr2 (164-219)||(17905654-17905709)
chr2 (166-199)||(3345765-3345798)
chr2 (162-219)||(8735842-8735899)
chr2 (162-199)||(8736461-8736498)
chr2 (166-199)||(11824786-11824819)
chr2 (162-199)||(21504466-21504503)
chr2 (165-218)||(30751365-30751418)
chr2 (164-199)||(11684696-11684731)
chr2 (164-219)||(14954266-14954321)
chr2 (168-199)||(19231305-19231336)
chr2 (161-199)||(20935722-20935759)
chr2 (162-199)||(3345852-3345889)
chr2 (166-199)||(11595339-11595372)
chr2 (166-199)||(11607241-11607274)
chr2 (169-210)||(39477976-39478017)
chr2 (161-218)||(40026061-40026118)
chr2 (166-199)||(44205678-44205711)
chr2 (191-219)||(32839666-32839694)
[»] chr7 (48 HSPs)
chr7 (164-219)||(40110737-40110792)
chr7 (164-219)||(43955517-43955572)
chr7 (161-219)||(43955618-43955676)
chr7 (162-219)||(6498769-6498826)
chr7 (162-219)||(26162141-26162198)
chr7 (162-219)||(28539172-28539229)
chr7 (164-219)||(2057395-2057450)
chr7 (164-219)||(31632722-31632777)
chr7 (162-213)||(34398959-34399010)
chr7 (161-219)||(35455801-35455859)
chr7 (162-219)||(2057499-2057556)
chr7 (162-219)||(5644781-5644838)
chr7 (158-219)||(23548615-23548676)
chr7 (155-219)||(29065810-29065874)
chr7 (164-219)||(5644677-5644732)
chr7 (164-219)||(14603266-14603321)
chr7 (164-219)||(35776959-35777014)
chr7 (164-219)||(39342646-39342701)
chr7 (164-219)||(40110842-40110897)
chr7 (165-219)||(9784935-9784989)
chr7 (161-219)||(29065923-29065981)
chr7 (162-219)||(23455251-23455308)
chr7 (164-219)||(25189230-25189285)
chr7 (162-219)||(34388369-34388426)
chr7 (170-218)||(21635990-21636038)
chr7 (164-219)||(29639219-29639274)
chr7 (164-219)||(30524255-30524310)
chr7 (168-218)||(30629061-30629111)
chr7 (164-214)||(40854079-40854129)
chr7 (162-199)||(40853985-40854022)
chr7 (163-219)||(18789250-18789306)
chr7 (164-219)||(21635885-21635940)
chr7 (164-211)||(29195709-29195756)
chr7 (164-199)||(31913236-31913271)
chr7 (164-219)||(44915195-44915250)
chr7 (173-219)||(22351876-22351922)
chr7 (165-199)||(30587909-30587943)
chr7 (161-195)||(31913309-31913343)
chr7 (162-199)||(13815000-13815037)
chr7 (166-218)||(22391592-22391644)
chr7 (164-195)||(30080811-30080842)
chr7 (164-219)||(34388265-34388320)
chr7 (153-212)||(46482056-46482115)
chr7 (164-219)||(49052786-49052840)
chr7 (166-215)||(18926812-18926861)
chr7 (162-199)||(32650589-32650626)
chr7 (162-199)||(40667357-40667394)
chr7 (190-219)||(43791116-43791145)
[»] chr5 (56 HSPs)
chr5 (164-219)||(15374064-15374119)
chr5 (164-219)||(40643921-40643976)
chr5 (161-219)||(22766949-22767007)
chr5 (161-219)||(26281284-26281342)
chr5 (166-220)||(28828369-28828423)
chr5 (166-219)||(2721575-2721628)
chr5 (162-219)||(9764442-9764499)
chr5 (162-219)||(22303885-22303942)
chr5 (162-219)||(37722909-37722966)
chr5 (164-219)||(2316378-2316433)
chr5 (164-219)||(15804322-15804377)
chr5 (165-219)||(3563278-3563332)
chr5 (165-219)||(20523237-20523291)
chr5 (166-218)||(15804399-15804451)
chr5 (164-219)||(927302-927357)
chr5 (164-219)||(9764338-9764393)
chr5 (164-219)||(25935305-25935360)
chr5 (164-219)||(40090429-40090484)
chr5 (164-219)||(41762230-41762285)
chr5 (162-219)||(15373958-15374015)
chr5 (166-219)||(19533922-19533975)
chr5 (162-219)||(20523131-20523188)
chr5 (164-219)||(6634015-6634070)
chr5 (164-219)||(16515122-16515177)
chr5 (164-215)||(23092070-23092121)
chr5 (164-219)||(32250113-32250167)
chr5 (165-212)||(33245394-33245441)
chr5 (164-219)||(34982216-34982270)
chr5 (164-219)||(40809341-40809396)
chr5 (164-219)||(13243457-13243514)
chr5 (166-219)||(28828451-28828504)
chr5 (166-219)||(32389974-32390027)
chr5 (162-219)||(35379342-35379398)
chr5 (166-219)||(37145516-37145569)
chr5 (162-219)||(40809445-40809502)
chr5 (161-213)||(13243514-13243566)
chr5 (168-207)||(9894349-9894388)
chr5 (164-219)||(32390076-32390131)
chr5 (164-219)||(32470882-32470937)
chr5 (161-219)||(2316483-2316540)
chr5 (164-209)||(5658776-5658821)
chr5 (162-219)||(23091961-23092017)
chr5 (162-199)||(33146059-33146096)
chr5 (162-199)||(33146189-33146226)
chr5 (164-199)||(2550328-2550363)
chr5 (166-217)||(14834826-14834877)
chr5 (168-219)||(16515009-16515059)
chr5 (164-199)||(22305112-22305147)
chr5 (162-219)||(32470986-32471041)
chr5 (162-199)||(22302537-22302574)
chr5 (162-199)||(34982313-34982350)
chr5 (164-199)||(15270871-15270906)
chr5 (165-199)||(12064485-12064519)
chr5 (172-213)||(12991333-12991374)
chr5 (166-219)||(20320663-20320716)
chr5 (161-194)||(34105086-34105119)
[»] chr8 (50 HSPs)
chr8 (161-219)||(33902664-33902722)
chr8 (162-219)||(3853614-3853671)
chr8 (162-219)||(3858072-3858129)
chr8 (164-219)||(17110869-17110924)
chr8 (164-219)||(42711384-42711439)
chr8 (161-219)||(44889351-44889409)
chr8 (162-219)||(14800064-14800121)
chr8 (162-219)||(17110973-17111030)
chr8 (162-219)||(24044958-24045015)
chr8 (162-219)||(28324690-28324747)
chr8 (162-219)||(29257379-29257436)
chr8 (164-219)||(14991692-14991747)
chr8 (164-219)||(33377325-33377380)
chr8 (164-219)||(40046804-40046859)
chr8 (161-219)||(44346706-44346764)
chr8 (166-219)||(4156271-4156324)
chr8 (166-219)||(29482835-29482888)
chr8 (161-218)||(37268112-37268169)
chr8 (164-219)||(23011734-23011789)
chr8 (164-219)||(36103101-36103156)
chr8 (161-215)||(515564-515618)
chr8 (161-219)||(13404824-13404882)
chr8 (174-219)||(13404931-13404976)
chr8 (164-209)||(27322687-27322732)
chr8 (164-212)||(32626069-32626117)
chr8 (164-219)||(14239-14293)
chr8 (164-219)||(31807409-31807463)
chr8 (164-219)||(33986004-33986059)
chr8 (168-218)||(30435250-30435300)
chr8 (166-219)||(3853720-3853773)
chr8 (166-219)||(3858178-3858231)
chr8 (170-219)||(8689138-8689187)
chr8 (162-199)||(29611386-29611423)
chr8 (162-199)||(34008797-34008834)
chr8 (179-219)||(8049269-8049309)
chr8 (167-219)||(35979032-35979084)
chr8 (164-219)||(1088305-1088360)
chr8 (164-199)||(14799979-14800014)
chr8 (164-219)||(33902771-33902825)
chr8 (181-219)||(40046894-40046932)
chr8 (162-199)||(7202934-7202971)
chr8 (158-219)||(11744747-11744808)
chr8 (163-199)||(30435350-30435386)
chr8 (164-199)||(30444963-30444998)
chr8 (164-199)||(42739949-42739984)
chr8 (161-199)||(8409947-8409985)
chr8 (161-218)||(9982634-9982690)
chr8 (165-194)||(34388527-34388556)
chr8 (162-195)||(42711302-42711335)
chr8 (167-199)||(26520469-26520501)
[»] scaffold1562 (2 HSPs)
scaffold1562 (166-219)||(509-562)
scaffold1562 (164-219)||(405-460)
[»] scaffold1158 (2 HSPs)
scaffold1158 (166-219)||(2031-2084)
scaffold1158 (164-219)||(2133-2188)
[»] scaffold0009 (2 HSPs)
scaffold0009 (161-219)||(41994-42052)
scaffold0009 (164-219)||(42082-42137)
[»] scaffold0048 (1 HSPs)
scaffold0048 (166-219)||(82945-82998)
[»] scaffold0318 (1 HSPs)
scaffold0318 (162-219)||(2865-2922)
[»] scaffold0400 (1 HSPs)
scaffold0400 (165-219)||(4516-4570)
[»] scaffold0365 (1 HSPs)
scaffold0365 (165-219)||(5160-5214)
[»] scaffold0301 (1 HSPs)
scaffold0301 (166-219)||(7153-7206)
[»] scaffold0169 (1 HSPs)
scaffold0169 (164-219)||(4075-4130)
[»] scaffold0129 (2 HSPs)
scaffold0129 (166-213)||(19200-19247)
scaffold0129 (166-209)||(19813-19855)
[»] scaffold0044 (1 HSPs)
scaffold0044 (168-219)||(56378-56429)
[»] scaffold0240 (1 HSPs)
scaffold0240 (157-199)||(17605-17647)
[»] scaffold0039 (1 HSPs)
scaffold0039 (161-199)||(109046-109084)
[»] scaffold0027 (1 HSPs)
scaffold0027 (165-219)||(10887-10941)
[»] scaffold0337 (1 HSPs)
scaffold0337 (164-219)||(15882-15936)
[»] scaffold0065 (1 HSPs)
scaffold0065 (164-219)||(2924-2978)


Alignment Details
Target: chr1 (Bit Score: 142; Significance: 1e-74; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 20 - 165
Target Start/End: Original strand, 39776418 - 39776563
Alignment:
Q  20 agaacaatcaactccagattattaacatgaacattttgaatatgaaagcatacaaagaaagcgtgcgtacagaaccattcattggtcataacaaataaga 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  39776418 agaacaatcaactccagattattaacatgaacattttgaatatgaaagcatacaaagaaagcgtgcgtacagaaccattcattggtcataacaaatatga 39776517  T
Q  120 taaataaaatagctgtaaattacacatatcaggaaattacatttag 165  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  39776518 taaataaaatagctgtaaattacacatatcaggaaattacatttag 39776563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 15034820 - 15034763
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15034820 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 15034763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 23536067 - 23536122
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23536067 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 23536122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 24273295 - 24273238
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24273295 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattc 24273238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 30190297 - 30190240
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  30190297 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggtaattc 30190240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 34756425 - 34756482
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34756425 ttagagagtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 34756482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 4038075 - 4038130
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  4038075 agagtgtgtttgggtgggggaatgttttgagggaatgtaatgttttgagggaattc 4038130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 15034659 - 15034714
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  15034659 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattc 15034714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 26501152 - 26501097
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  26501152 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattc 26501097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 6470762 - 6470704
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  6470762 tttagagtgtgtttggatggcggaatgttttgagagaatgtaatgttttgagggaattc 6470704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 8224768 - 8224822
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaatt 218  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8224768 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaatt 8224822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 4038236 - 4038179
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  4038236 ttagagtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattc 4038179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 45565392 - 45565449
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  45565392 ttagggtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattc 45565449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 168 - 219
Target Start/End: Original strand, 27804269 - 27804320
Alignment:
Q  168 tgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  27804269 tgtgtttggatgggggaatgttttgagggaatgtaatattttgagggaattc 27804320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 47165288 - 47165230
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||| | |||||||||||| |||||||||||||||||||||||    
T  47165288 tttagagtgtgtttggatggagaaatgttttgaggaaatgtaatgttttgagggaattc 47165230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 40264187 - 40264134
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  40264187 agtgtgtttggatgggggaatattttgaggtaatgtaatgttttgagggaattc 40264134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 37037019 - 37036967
Alignment:
Q  167 gtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||    
T  37037019 gtgtgtttggatgagggaatgttttgagtgaatgtaatgttttgagggaattc 37036967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 43623051 - 43623003
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgag 212  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  43623051 agagtgtgtttggatgggggaatgttttgatggaatgtaatgttttgag 43623003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 29446750 - 29446805
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||| | ||||||||||||||| |||||||||||||||||||||||||    
T  29446750 agagtgtgtttgaacgggggaatgttttgaaggaatgtaatgttttgagggaattc 29446805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 32288006 - 32287951
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||    
T  32288006 agagtgtgtttggatggaggaaagttttgagggaatgtaatgttttgaggaaattc 32287951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 219
Target Start/End: Complemental strand, 32573080 - 32573026
Alignment:
Q  165 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||| |||||||||||||| |||||||| |||||||||||||||||||||||    
T  32573080 gagtgtgattggatgggggaatattttgaggtaatgtaatgttttgagggaattc 32573026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 28632656 - 28632603
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||| ||||||    
T  28632656 agtgtgtttggatgagggaatgtttggagggaatgtaatgttttgagagaattc 28632603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 28745799 - 28745852
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||| ||||||||||||||| |||||||||||||||||| |||||||||||||    
T  28745799 agtgtatttggatgggggaatattttgagggaatgtaatggtttgagggaattc 28745852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 44410309 - 44410366
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||| || ||||||    
T  44410309 ttagagtgtatttggatgggagaatgttttgagggaatgtaatgttttaagcgaattc 44410366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 50005236 - 50005183
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||| ||||| |||||||| |||||||||||||||||||||||    
T  50005236 agtgtgtttggatggaggaatattttgaggtaatgtaatgttttgagggaattc 50005183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 27804424 - 27804369
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||| |||||||||||||| |||||||||||| || |||||||    
T  27804424 agagtgtgtttggatggaggaatgttttgaggaaatgtaatgtttagaaggaattc 27804369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 27935644 - 27935589
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||| | ||| |||||||||||||||||||||||||| |||||    
T  27935644 agagtgtgtttggatggagaaatattttgagggaatgtaatgttttgaggaaattc 27935589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 38277415 - 38277470
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||| | |||| |||||||||||||||||||||||| |||||||    
T  38277415 agagtgtgtttggatgagagaatattttgagggaatgtaatgttttgaaggaattc 38277470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 44410470 - 44410415
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||| ||||||| |||||||| ||||||| |||||||||||||||    
T  44410470 agagtgtgtttggattggggaatattttgaggtaatgtaaagttttgagggaattc 44410415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 173 - 219
Target Start/End: Original strand, 44570687 - 44570733
Alignment:
Q  173 ttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||||    
T  44570687 ttggatgggagaatgttttgagggaatgtaatgttttgaaggaattc 44570733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 31166310 - 31166363
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaat 217  Q
    |||||||||||||||| ||||||||||||||  ||||||||||||||| |||||    
T  31166310 agagtgtgtttggatgagggaatgttttgagataatgtaatgttttgatggaat 31166363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 199
Target Start/End: Original strand, 32572938 - 32572975
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||||||||||||||||||||||||    
T  32572938 ttagagtgtgtttggatgggggaatgttttgagggaat 32572975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 34756584 - 34756531
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||| ||| |||||||| ||| |||||||||||||||||||    
T  34756584 agtgtgtttggatggggaaatattttgaggtaatataatgttttgagggaattc 34756531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 173 - 218
Target Start/End: Complemental strand, 37448465 - 37448420
Alignment:
Q  173 ttggatgggggaatgttttgagggaatgtaatgttttgagggaatt 218  Q
    ||||||| |||||||||||||| |||||||||||||||||||||||    
T  37448465 ttggatgagggaatgttttgagagaatgtaatgttttgagggaatt 37448420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 38277571 - 38277519
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||| ||| |||||||| |||||||||||||||||||||||    
T  38277571 agtgtgtttggatgggg-aatattttgaggtaatgtaatgttttgagggaattc 38277519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 164 - 204
Target Start/End: Original strand, 5474417 - 5474457
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaat 204  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  5474417 agagtgtgtttggatgggggaatgttttgagggaatttaat 5474457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 199
Target Start/End: Original strand, 15245460 - 15245495
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||||||||||||||||||||||    
T  15245460 agagtgtgtttggatgggggaatgttttgagggaat 15245495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 50005079 - 50005134
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||  ||||| ||||||| ||||||||||||||||| ||||||    
T  50005079 agagtgtgtttggatgacggaatattttgagagaatgtaatgttttgagcgaattc 50005134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 199
Target Start/End: Original strand, 32128045 - 32128083
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  32128045 tttagagtgtgtttagatgggggaatgttttgagggaat 32128083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 49659217 - 49659270
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaatt 218  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||  |||||||||    
T  49659217 agagtgtgtttggatgggg-aatgtattgagggaatgtaatgttacgagggaatt 49659270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 167 - 209
Target Start/End: Original strand, 51847855 - 51847897
Alignment:
Q  167 gtgtgtttggatgggggaatgttttgagggaatgtaatgtttt 209  Q
    |||||||||||||| |||||||||||||| |||||||||||||    
T  51847855 gtgtgtttggatggaggaatgttttgaggtaatgtaatgtttt 51847897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 199
Target Start/End: Complemental strand, 23536210 - 23536173
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  23536210 ttagaatgtgtttggatgggggaatgttttgagggaat 23536173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 199
Target Start/End: Complemental strand, 37214961 - 37214924
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    |||||||||||||||||||| |||||||||||||||||    
T  37214961 ttagagtgtgtttggatgggagaatgttttgagggaat 37214924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 199
Target Start/End: Original strand, 48953585 - 48953622
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    |||||||||||||||||||||||||||||||| |||||    
T  48953585 ttagagtgtgtttggatgggggaatgttttgaaggaat 48953622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 946374 - 946429
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaatt 218  Q
    |||||||||||||||||| |  |||| |||||||||||||| |||||||||||||||    
T  946374 ttagagtgtgtttggatgaga-aatgctttgagggaatgtattgttttgagggaatt 946429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 164 - 216
Target Start/End: Original strand, 10166499 - 10166551
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaa 216  Q
    |||||||||||||||| | |||||||||| || ||||||||||||||| ||||    
T  10166499 agagtgtgtttggatgagagaatgttttgtggtaatgtaatgttttgaaggaa 10166551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 32652205 - 32652261
Alignment:
Q  163 tagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||| ||||||||| | |||||||||||| |||||| |||||||||| |||||    
T  32652205 tagagtgtatttggatggagaaatgttttgaggaaatgtattgttttgaggaaattc 32652261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 171 - 219
Target Start/End: Complemental strand, 37447968 - 37447920
Alignment:
Q  171 gtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||| ||||||| ||| |||||||||||||||||||| |||||||    
T  37447968 gtttggataggggaatatttggagggaatgtaatgttttgaaggaattc 37447920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 199
Target Start/End: Original strand, 40264048 - 40264083
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||| ||||||||||||||||||||    
T  40264048 agagtgtgtttggataggggaatgttttgagggaat 40264083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 199
Target Start/End: Complemental strand, 41823215 - 41823180
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaat 199  Q
    |||||||||||||||||||||||||||||| |||||    
T  41823215 agagtgtgtttggatgggggaatgttttgaaggaat 41823180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 199
Target Start/End: Original strand, 50471768 - 50471803
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaat 199  Q
    |||||||||||||||||||||| |||||||||||||    
T  50471768 agagtgtgtttggatgggggaaagttttgagggaat 50471803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 199
Target Start/End: Complemental strand, 17502324 - 17502286
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    |||||||||||||| ||| ||||||||||||||||||||    
T  17502324 tttagagtgtgttttgattggggaatgttttgagggaat 17502286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 28745950 - 28745900
Alignment:
Q  169 gtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||| | |||| |||| |||||||||||| ||||||||||||||    
T  28745950 gtgtttggatgagagaatattttaagggaatgtaatattttgagggaattc 28745900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 218
Target Start/End: Complemental strand, 52281010 - 52280972
Alignment:
Q  180 ggggaatgttttgagggaatgtaatgttttgagggaatt 218  Q
    ||||||| ||||||||||| |||||||||||||||||||    
T  52281010 ggggaatcttttgagggaaagtaatgttttgagggaatt 52280972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 199
Target Start/End: Original strand, 34007356 - 34007393
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||||||| ||| ||||||||||||    
T  34007356 ttagagtgtgtttggatggggaaatattttgagggaat 34007393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 219
Target Start/End: Original strand, 32647300 - 32647356
Alignment:
Q  163 tagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||| |||||| || |||||||||||| | |||||| |||||||||| |||||    
T  32647300 tagagtgtatttggacggaggaatgttttgaagaaatgtattgttttgaggaaattc 32647356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 59; Significance: 4e-25; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 49111474 - 49111416
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49111474 tttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 49111416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 31473846 - 31473904
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  31473846 tttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattc 31473904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 857400 - 857343
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  857400 ttagagtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaattc 857343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 15660344 - 15660287
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  15660344 ttagagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattc 15660287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 36455905 - 36455962
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  36455905 ttagagtgtgtttggatgggggaatgttttgagggaatctaatgttttgagggaattc 36455962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 14982278 - 14982334
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaatt 218  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  14982278 ttagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaatt 14982334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 7352971 - 7352916
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7352971 agagtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaattc 7352916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 165 - 219
Target Start/End: Original strand, 4441338 - 4441392
Alignment:
Q  165 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4441338 gagtgtgtttggatggtggaatgttttgagggaatgtaatgttttgagggaattc 4441392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 2125855 - 2125912
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  2125855 ttagagtgtgtttggatgggggaatattttgagggaatgtattgttttgagggaattc 2125912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 4896646 - 4896703
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  4896646 ttagagtgtgtttggatgggggaatattttgaggtaatgtaatgttttgagggaattc 4896703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 7352814 - 7352867
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  7352814 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgatggaattc 7352867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 10128135 - 10128078
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  10128135 ttagagtgtatttggatgggggaatgttttgagagaatgtaatgttttgagggaattc 10128078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 11348398 - 11348341
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  11348398 ttagagtgtatttggatgggggaatgttttaagggaatgtaatgttttgagggaattc 11348341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 16516168 - 16516225
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaatt 218  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  16516168 tttagagtgtgtttggatgggggaatgttttgacggaatgtaatgttttgaaggaatt 16516225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 28846032 - 28845975
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||    
T  28846032 ttagagtgtgtttggatggggaaatgttttgagggaatataatgttttgagggaattc 28845975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 10633035 - 10633087
Alignment:
Q  167 gtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  10633035 gtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattc 10633087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 1112605 - 1112660
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  1112605 agagtgtgtttggatgggggaatgttttgaggaaatgtaatgtttcgagggaattc 1112660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 1107214 - 1107156
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||| ||||||||||||||| |||||||||||| |||||||||||||||||||    
T  1107214 tttagagtgtatttggatgggggaatattttgagggaatataatgttttgagggaattc 1107156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 4896789 - 4896736
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  4896789 agtgtgtttggatggggaaatattttgagggaatgtaatgttttgagggaattc 4896736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 31742923 - 31742874
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagg 213  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31742923 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagg 31742874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 1539649 - 1539696
Alignment:
Q  172 tttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1539649 tttggatggaggaatgttttgagggaatgtaatgttttgagggaattc 1539696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 15660183 - 15660238
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||| ||||||| |||||||| |||||||||||||||||||||||    
T  15660183 agagtgtgtttggataggggaatattttgaggtaatgtaatgttttgagggaattc 15660238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 36456085 - 36456030
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||    
T  36456085 agagtgtgtttggatggaggaatgttttgagggaatgtaatattttgaggaaattc 36456030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 41498649 - 41498594
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||    
T  41498649 agagtgtgtttggatggaggaatattttgagggaatgtaatgttttgaaggaattc 41498594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 169 - 219
Target Start/End: Original strand, 28845876 - 28845926
Alignment:
Q  169 gtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  28845876 gtgtttggatggaggaatgttttgagggaatgtaatgtttcgagggaattc 28845926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 5715742 - 5715799
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||| ||||||||||||||  ||||||||||||||||| |||||    
T  5715742 ttagagtgtgtttggatgagggaatgttttgagataatgtaatgttttgaggtaattc 5715799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 11040966 - 11041022
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||||    
T  11040966 ttagagtgtgtttggatgggg-aatattttgagggaatgtaatgttttgagagaattc 11041022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 35470120 - 35470177
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||| ||||| | ||||||||||||||||||| ||||||||||||||||    
T  35470120 ttagagtgtgtttagatggtgaaatgttttgagggaatgtattgttttgagggaattc 35470177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 211
Target Start/End: Complemental strand, 42543024 - 42542979
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttga 211  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  42543024 agtgtgtttggatggtggaatgttttgagggaatgtaatgttttga 42542979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 42844543 - 42844598
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||| | ||||||||||||||||||||||||||||| |||||| |||||||    
T  42844543 agagtgtgtatagatgggggaatgttttgagggaatgtaatattttgaaggaattc 42844598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 199
Target Start/End: Complemental strand, 26251053 - 26251015
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    |||||||||||||||||||||||||||||||||||||||    
T  26251053 tttagagtgtgtttggatgggggaatgttttgagggaat 26251015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 166 - 216
Target Start/End: Complemental strand, 42844700 - 42844650
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaa 216  Q
    ||||||||||||||||| ||| |||||||| ||||||||||||||||||||    
T  42844700 agtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaa 42844650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 55266937 - 55266879
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||  ||||||||||||| ||| |||| ||||||||||||||    
T  55266937 tttagagtgtgtttggatggatgaatgttttgaggaaatataatattttgagggaattc 55266879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 1112783 - 1112726
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||| |||||||||||||| ||||||||||  |||||||||||| ||||||||||    
T  1112783 ttagagtttgtttggatggggggatgttttgagcaaatgtaatgtttcgagggaattc 1112726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 10127976 - 10128029
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||| |||||| | ||||||||||||||| |||||||    
T  10127976 agtgtgtttggatgggggaatattttgaagtaatgtaatgttttgaaggaattc 10128029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 26250911 - 26250964
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||| |||||| |||||||| ||||||||||||||||| |||||    
T  26250911 agtgtgtttggatgagggaatattttgaggtaatgtaatgttttgaggaaattc 26250964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 162 - 213
Target Start/End: Complemental strand, 467962 - 467912
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagg 213  Q
    ||||||||||||||||||| | |||||||||| |||||||||||||||||||    
T  467962 ttagagtgtgtttggatggag-aatgttttgatggaatgtaatgttttgagg 467912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 41498486 - 41498545
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaatgtaatg-ttttgagggaattc 219  Q
    |||||||||||||||||||||||| ||||||||| |||  ||||| ||||||||||||||    
T  41498486 tttagagtgtgtttggatgggggattgttttgagagaaaataatgtttttgagggaattc 41498545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 31742778 - 31742831
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||| ||||| |||| ||| | |||||||||||||||||||||    
T  31742778 agtgtgtttggatggaggaatattttaaggtagtgtaatgttttgagggaattc 31742831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 199
Target Start/End: Original strand, 42775625 - 42775658
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||||||||||||||||||||    
T  42775625 agtgtgtttggatgggggaatgttttgagggaat 42775658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 199
Target Start/End: Complemental strand, 53760847 - 53760810
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    |||||||||||||| |||||||||||||||||||||||    
T  53760847 ttagagtgtgtttgaatgggggaatgttttgagggaat 53760810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 199
Target Start/End: Original strand, 47108317 - 47108353
Alignment:
Q  163 tagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||| |||||||||||||||||||    
T  47108317 tagagtgtgtttggatgagggaatgttttgagggaat 47108353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 199
Target Start/End: Complemental strand, 14982420 - 14982385
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||||||||| ||||||||||||    
T  14982420 agagtgtgtttggatgggggaatcttttgagggaat 14982385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 195
Target Start/End: Complemental strand, 4441468 - 4441438
Alignment:
Q  165 gagtgtgtttggatgggggaatgttttgagg 195  Q
    |||||||||||||||||||||||||||||||    
T  4441468 gagtgtgtttggatgggggaatgttttgagg 4441438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 52493926 - 52493978
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaatt 218  Q
    ||||||||||||||||||| |||||||||| | ||||||||| ||||||||||||    
T  52493926 agagtgtgtttggatgggg-aatgttttgaagtaatgtaatg-tttgagggaatt 52493978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 199
Target Start/End: Original strand, 56339148 - 56339186
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  56339148 tttagagtgtgtttggatgatggaatgttttgagggaat 56339186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 19461807 - 19461754
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||| ||||||||||| ||| |||||| | |||||||||||||||| ||||||    
T  19461807 agtgtttttggatggggaaatattttgaagtaatgtaatgttttgagcgaattc 19461754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 32724928 - 32724961
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagg 195  Q
    |||||||||||||| |||||||||||||||||||    
T  32724928 ttagagtgtgtttgaatgggggaatgttttgagg 32724961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 199
Target Start/End: Complemental strand, 46243148 - 46243115
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||||||||||||||| ||||    
T  46243148 agtgtgtttggatgggggaatgttttgagagaat 46243115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 199
Target Start/End: Complemental strand, 52295098 - 52295065
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||||||||||| ||||||||    
T  52295098 agtgtgtttggatgggggaatgtttcgagggaat 52295065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 219
Target Start/End: Original strand, 857266 - 857294
Alignment:
Q  191 tgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||||||||||||    
T  857266 tgagggaatgtaatgttttgagggaattc 857294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 1107051 - 1107107
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttga-gggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||| || ||| |||| | |||||||||||||||||| |||||||    
T  1107051 agagtgtgtttggatgaggaaatttttttaagggaatgtaatgttttgaaggaattc 1107107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 219
Target Start/End: Original strand, 29091164 - 29091192
Alignment:
Q  191 tgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||||||||||||    
T  29091164 tgagggaatgtaatgttttgagggaattc 29091192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 31947590 - 31947648
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaa---tgtaatgttttgagggaattc 219  Q
    ||||| |||||||||||| ||||||||||||||||   |||||||||  ||||||||||    
T  31947590 agagtatgtttggatgggagaatgttttgagggaatattgtaatgttacgagggaattc 31947648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 41139475 - 41139528
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||| |  | ||||||| ||||||||||||||||| |||||    
T  41139475 agagtgtgtttggatggggaa--gctttgaggtaatgtaatgttttgaggaaattc 41139528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 42776637 - 42776685
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgag 212  Q
    |||||||||||||||||  ||||||||| |||  |||||||||||||||    
T  42776637 agagtgtgtttggatggaagaatgtttttaggttatgtaatgttttgag 42776685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 4e-25; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 46672878 - 46672820
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46672878 tttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 46672820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 49457343 - 49457398
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49457343 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 49457398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 36398063 - 36398006
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  36398063 ttagagtgtgtttggatgggggaatgttttgagggaatgtattgttttgagggaattc 36398006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 44692820 - 44692877
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  44692820 ttagagtgtgtttggatgggggaatgttttgagggaaagtaatgttttgagggaattc 44692877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 47767430 - 47767487
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  47767430 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaattc 47767487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 219
Target Start/End: Complemental strand, 9129508 - 9129448
Alignment:
Q  159 catttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  9129508 cattaagagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattc 9129448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 159 - 219
Target Start/End: Complemental strand, 9137615 - 9137555
Alignment:
Q  159 catttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  9137615 cattaagagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattc 9137555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 27252053 - 27251998
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  27252053 agagtgtgtttggatggggggatgttttgagggaatgtaatgttttgagggaattc 27251998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 44436258 - 44436313
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  44436258 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattc 44436313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 44692981 - 44692926
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  44692981 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattc 44692926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 42006025 - 42005971
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaatt 218  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  42006025 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaatt 42005971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 37054392 - 37054449
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||    
T  37054392 ttagagtgtgtttggatgggggaatgttttaagggaatgtaatgttttgaaggaattc 37054449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 5415783 - 5415838
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  5415783 agagtgtgtttggataggggaatattttgagggaatgtaatgttttgagggaattc 5415838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 168 - 219
Target Start/End: Complemental strand, 21307600 - 21307549
Alignment:
Q  168 tgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  21307600 tgtgtttggatgggggaatgttttgcgggaatgtaatgttttgagggaattc 21307549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 35279970 - 35279920
Alignment:
Q  168 tgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaatt 218  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  35279970 tgtgtttggatgggggaatgttttgagggaatgtaatgttttgagtgaatt 35279920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 28092212 - 28092269
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  28092212 ttagagtatgtttggatgggggaatgttttgaggaaatgtgatgttttgagggaattc 28092269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 671691 - 671636
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  671691 agagtgtttttggataggggaatgttttgagggaatgtattgttttgagggaattc 671636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 5415942 - 5415887
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||| ||||||||||| |||||||||||| |||||||    
T  5415942 agagtgtgtttggatgggggaatattttgagggaaagtaatgttttgatggaattc 5415887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 7302346 - 7302401
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||| |||||||||||||| |||||||||||||||| |||||||    
T  7302346 agagtgtgtttggatgagggaatgttttgagagaatgtaatgttttgaaggaattc 7302401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 34088571 - 34088626
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||    
T  34088571 agagtgtgtttggatggagaaatgttttgagggaatgtattgttttgagggaattc 34088626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 53129915 - 53129860
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||| |||||||||| |||||||||||||||||| |||||||||    
T  53129915 agagtgtgtttggatgagggaatgtttcgagggaatgtaatgttttaagggaattc 53129860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 46429557 - 46429500
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||| |||||| |||||||| ||||||||||||||| |||||||    
T  46429557 ttagagtgtgtttggatgagggaatattttgaggtaatgtaatgttttgaaggaattc 46429500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 47284387 - 47284330
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||| | |||| |||||||| |||||||||||||||||||||||    
T  47284387 ttagagtgtgtttggatgagagaatattttgaggtaatgtaatgttttgagggaattc 47284330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 48947603 - 48947660
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||  |||||||||||||||||||| ||||||||| ||||||    
T  48947603 ttagagtgtgtttggatggaagaatgttttgagggaatgtattgttttgagagaattc 48947660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 53470503 - 53470446
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||| || |||||||||||||||| || ||||||||||||||||    
T  53470503 ttagagtgtgtttggatgaggaaatgttttgagggaatctattgttttgagggaattc 53470446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 9129344 - 9129399
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||| || | |||||||||||||||||||||||| |||||||    
T  9129344 agagtgtgtttggatgggagactattttgagggaatgtaatgttttgatggaattc 9129399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 9137451 - 9137506
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||| || | |||||||||||||||||||||||| |||||||    
T  9137451 agagtgtgtttggatgggagactattttgagggaatgtaatgttttgatggaattc 9137506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 180 - 219
Target Start/End: Original strand, 31070422 - 31070461
Alignment:
Q  180 ggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  31070422 ggggaatgttttgagggaatgtaatgttttgagggaattc 31070461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 46001364 - 46001419
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||| ||||| |||||||| |||||||||||| ||||||||||    
T  46001364 agagtgtgtttggatggcggaatattttgaggtaatgtaatgtttcgagggaattc 46001419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 31189472 - 31189414
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||| ||| | ||||||||||||| |||||||||||||||| ||||||    
T  31189472 tttagagtgtgtttgaatgagagaatgttttgaggtaatgtaatgttttgagagaattc 31189414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 37321547 - 37321605
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||| ||||||||||||||| |||||||| || |||||||||||||| |||||    
T  37321547 tttagagtgtatttggatgggggaatattttgaggaaaagtaatgttttgaggaaattc 37321605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 30767102 - 30767159
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||| ||||||||||| |||||||||||||||| ||||||| ||| |||||||    
T  30767102 ttagagtgtatttggatggggtaatgttttgagggaatctaatgttatgaaggaattc 30767159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 39110392 - 39110449
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||  | ||||||||||| ||||||||||||||| ||||||||    
T  39110392 ttagagtgtgtttggatgaagaaatgttttgagcgaatgtaatgttttgtgggaattc 39110449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 42130694 - 42130747
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||| ||||||||| ||||||||  ||||||||||||||||||||||    
T  42130694 agtgtgtttgggtgggggaatattttgaggtgatgtaatgttttgagggaattc 42130747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 199
Target Start/End: Original strand, 46429412 - 46429449
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||||||||||||||||||||||||    
T  46429412 ttagagtgtgtttggatgggggaatgttttgagggaat 46429449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 208
Target Start/End: Original strand, 2732636 - 2732683
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttt 208  Q
    |||||||||||||||||||||| |||||||||||| ||| ||||||||    
T  2732636 tttagagtgtgtttggatggggaaatgttttgaggtaatataatgttt 2732683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 19475824 - 19475871
Alignment:
Q  172 tttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||| |||||||||||||||||||||||||| ||||| |||||    
T  19475824 tttggatggaggaatgttttgagggaatgtaatgttatgaggtaattc 19475871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 160 - 219
Target Start/End: Original strand, 46635853 - 46635912
Alignment:
Q  160 atttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||| |  |||||||||||  ||||||||||||||||| |||||    
T  46635853 atttagagtgtgtttggatgagaaaatgttttgagctaatgtaatgttttgaggaaattc 46635912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 199
Target Start/End: Original strand, 25655313 - 25655350
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  25655313 ttagagtgtgtttggatggggaaatgttttgagggaat 25655350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 199
Target Start/End: Original strand, 27485474 - 27485507
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||||||||||||||||||||    
T  27485474 agtgtgtttggatgggggaatgttttgagggaat 27485507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 219
Target Start/End: Original strand, 30766571 - 30766608
Alignment:
Q  182 ggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||||||||||||| |||||||    
T  30766571 ggaatgttttgagggaatgtaatgttttgaaggaattc 30766608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 31070567 - 31070510
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||| |||||| || || |||| |||||||| |||||||||||||||||||||||    
T  31070567 ttagagtatgtttgaattggagaatattttgaggtaatgtaatgttttgagggaattc 31070510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 219
Target Start/End: Complemental strand, 44288525 - 44288476
Alignment:
Q  170 tgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||| |||||||||||||| ||| ||||||||||| |||||||    
T  44288525 tgtttggatggaggaatgttttgaggtaatataatgttttgatggaattc 44288476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 167 - 207
Target Start/End: Original strand, 52527039 - 52527079
Alignment:
Q  167 gtgtgtttggatgggggaatgttttgagggaatgtaatgtt 207  Q
    ||||||||||||||||||||||||||| || ||||||||||    
T  52527039 gtgtgtttggatgggggaatgttttgaagggatgtaatgtt 52527079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 199
Target Start/End: Complemental strand, 37321657 - 37321622
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||| ||||||||||||||||||||    
T  37321657 agagtgtgtttggattggggaatgttttgagggaat 37321622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 199
Target Start/End: Complemental strand, 54761618 - 54761583
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||| ||||||||||||||||||    
T  54761618 agagtgtgtttggatggaggaatgttttgagggaat 54761583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 193
Target Start/End: Complemental strand, 9007509 - 9007480
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttga 193  Q
    ||||||||||||||||||||||||||||||    
T  9007509 agagtgtgtttggatgggggaatgttttga 9007480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 199
Target Start/End: Original strand, 27251910 - 27251947
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||| |||||||||||||||||||||||| |||||||    
T  27251910 ttagaatgtgtttggatgggggaatgttttaagggaat 27251947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 199
Target Start/End: Complemental strand, 47284259 - 47284222
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  47284259 ttagagtgtgtttggatgagggaatattttgagggaat 47284222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 212
Target Start/End: Original strand, 47336885 - 47336929
Alignment:
Q  168 tgtgtttggatgggggaatgttttgagggaatgtaatgttttgag 212  Q
    ||||| ||||||||| |||||||| ||| ||||||||||||||||    
T  47336885 tgtgtgtggatggggaaatgttttaaggtaatgtaatgttttgag 47336929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 181 - 213
Target Start/End: Complemental strand, 50168665 - 50168633
Alignment:
Q  181 gggaatgttttgagggaatgtaatgttttgagg 213  Q
    ||||||||||||||| |||||||||||||||||    
T  50168665 gggaatgttttgaggtaatgtaatgttttgagg 50168633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 2e-24; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 9285645 - 9285702
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9285645 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 9285702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 34245055 - 34244998
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  34245055 ttagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattc 34244998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 6919866 - 6919811
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6919866 agagtgtgtttggatgggggaatgttttgagggaaagtaatgttttgagggaattc 6919811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 8574693 - 8574750
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  8574693 ttagagtgtgtttggatggggaaatgttttgagtgaatgtaatgttttgagggaattc 8574750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 29889509 - 29889452
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||    
T  29889509 ttagagtgtgtttggatggaggaatgttttgatggaatgtaatgttttgagggaattc 29889452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 8574824 - 8574769
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||    
T  8574824 agagtgtgtttggatggggaaatgttttgagtgaatgtaatgttttgagggaattc 8574769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 13487272 - 13487330
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||| |||||||||||    
T  13487272 tttagagtgtgtttagatgggggaatgttttgagggaatgtagtgttatgagggaattc 13487330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 6919710 - 6919763
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  6919710 agtgtgtttggatggaggaatggtttgagggaatgtaatgttttgagggaattc 6919763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 9763014 - 9763067
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||    
T  9763014 agtgtgtttggaaggggaaatgttttgagggaatgtaatgttttgagggaattc 9763067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 9763171 - 9763116
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||    
T  9763171 agagtgtgtttggatggaggaatattttgaggtaatgtaatgttttgagggaattc 9763116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 28918165 - 28918220
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||    
T  28918165 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttaaggaaattc 28918220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 161 - 204
Target Start/End: Original strand, 33733429 - 33733472
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaatgtaat 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  33733429 tttagagtgtgtttggatgggggaatgttttgagggaatgtaat 33733472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 15299586 - 15299529
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||    
T  15299586 tttagaatgtgtttggatgggg-aatgttttgagggaatgtaatgttttgaaggaattc 15299529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 776078 - 776135
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||| ||||| | |||||||||||||||||||||||||||||| |||||    
T  776078 ttagagtgtgtttagatggagaaatgttttgagggaatgtaatgttttgaggaaattc 776135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 1368475 - 1368532
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||| ||||||||||||| ||||||||| |||| |||||||||    
T  1368475 ttagagtgtgtttggatggaggaatgttttgagagaatgtaatattttaagggaattc 1368532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 776239 - 776184
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||| ||  |||||||||||||||||||||||||||||| |||||    
T  776239 agagtgtgtttggataggaaaatgttttgagggaatgtaatgttttgaggaaattc 776184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 197
Target Start/End: Original strand, 1195351 - 1195384
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgaggga 197  Q
    ||||||||||||||||||||||||||||||||||    
T  1195351 agagtgtgtttggatgggggaatgttttgaggga 1195384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 199
Target Start/End: Original strand, 8475179 - 8475214
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||||| ||||||||||||||||    
T  8475179 agagtgtgtttggatggggaaatgttttgagggaat 8475214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 219
Target Start/End: Original strand, 15832470 - 15832521
Alignment:
Q  168 tgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||| || ||||||| || ||||||||||||||| |||||||||    
T  15832470 tgtgtttggatgaggtaatgtttcgaaggaatgtaatgttttaagggaattc 15832521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 219
Target Start/End: Original strand, 15299412 - 15299454
Alignment:
Q  177 atgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||| ||||||||||||| ||||||||||||||||| ||||||    
T  15299412 atggaggaatgttttgagcgaatgtaatgttttgagagaattc 15299454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 58; Significance: 2e-24; HSPs: 48)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 41461676 - 41461619
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41461676 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 41461619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 14365700 - 14365755
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14365700 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 14365755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 14365860 - 14365803
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  14365860 ttagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattc 14365803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 168 - 219
Target Start/End: Original strand, 11684603 - 11684654
Alignment:
Q  168 tgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11684603 tgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 11684654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 14537199 - 14537254
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14537199 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggtaattc 14537254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 17180297 - 17180352
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  17180297 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgagggaattc 17180352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 27033490 - 27033545
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27033490 agagtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattc 27033545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 784955 - 784897
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  784955 tttagagtgtgtttggatgggggaatattttgatggaatgtaatgttttgagggaattc 784897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 1583884 - 1583827
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  1583884 ttagagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattc 1583827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 11716406 - 11716463
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  11716406 ttagagtgtgtttggatggaagaatgttttgagggaatgtaatgttttgagggaattc 11716463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 769036 - 769091
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  769036 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattc 769091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 10480119 - 10480174
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  10480119 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttacgagggaattc 10480174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 11141305 - 11141360
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  11141305 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattc 11141360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 172 - 219
Target Start/End: Complemental strand, 11716550 - 11716503
Alignment:
Q  172 tttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11716550 tttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 11716503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 33189330 - 33189275
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  33189330 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattc 33189275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 11532324 - 11532271
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||||||||||||    
T  11532324 agtgtgtttggatgggggaatatttggagggaatgtaatgttttgagggaattc 11532271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 11793897 - 11793950
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||||||||    
T  11793897 agtgtgtttggatgggggaatattttgagggaatgtaatgttatgagggaattc 11793950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 35047754 - 35047697
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||||||||||||||||| |||||| |||||| |||||||||    
T  35047754 ttagagtgtgtttggatgggggaatgttttgaggaaatgtattgttttaagggaattc 35047697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 28740599 - 28740651
Alignment:
Q  167 gtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  28740599 gtgtgtttgaatggggaaatgttttgagggaatgtaatgttttgagggaattc 28740651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 162 - 218
Target Start/End: Complemental strand, 45094546 - 45094490
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaatt 218  Q
    |||||||||||||| ||| ||||||||||||||||||| ||||||||||||||||||    
T  45094546 ttagagtgtgtttgaatgagggaatgttttgagggaatataatgttttgagggaatt 45094490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 172 - 219
Target Start/End: Original strand, 30698289 - 30698336
Alignment:
Q  172 tttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||    
T  30698289 tttggatgggggaatgttttgagggaatgtaatgttttgaaggaattc 30698336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 7228085 - 7228031
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaatt 218  Q
    ||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||    
T  7228085 agagtgtgtttggatggggaaatgttttgagagaatgtaatgttttgaaggaatt 7228031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 10244175 - 10244232
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||| |||| || |||||||| ||||||||||||||||||||    
T  10244175 ttagagtgtgtttggatgggagaatattctgagggaaagtaatgttttgagggaattc 10244232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 13017777 - 13017834
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||| || ||||||||||||||||||||| |||| |||||||||    
T  13017777 ttagagtgtgtttggatgtggaaatgttttgagggaatgtaatattttaagggaattc 13017834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 41461517 - 41461569
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaatt 218  Q
    ||||||||||||||||| ||| |||||||| ||||||||||||||||||||||    
T  41461517 agtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaatt 41461569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 3092282 - 3092337
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||| ||||||||| ||||||||||||||||||||| |||||||||| |||||    
T  3092282 agagtgtatttggatggaggaatgttttgagggaatgtattgttttgaggaaattc 3092337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 39630225 - 39630280
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||| |||| | ||||||||||||||||||| ||||||||||||||||    
T  39630225 agagtgtgtttgaatggagaaatgttttgagggaatgtattgttttgagggaattc 39630280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 784793 - 784847
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaatt 218  Q
    |||||||||||||||||   |||||||||||||||||||||||||||| ||||||    
T  784793 agagtgtgtttggatggaaaaatgttttgagggaatgtaatgttttgaaggaatt 784847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 199
Target Start/End: Complemental strand, 14537342 - 14537305
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||||||||||||||||||||||||    
T  14537342 ttagagtgtgtttggatgggggaatgttttgagggaat 14537305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 44256263 - 44256211
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||| ||| |||| |||||||||||||||||||||||    
T  44256263 agtgtgtttggatgggggaatattt-gaggtaatgtaatgttttgagggaattc 44256211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 17905654 - 17905709
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||| ||||| |||||||||||||| |||||||||||||| | |||||||    
T  17905654 agagtgtgttaggatgagggaatgttttgagagaatgtaatgttttaaaggaattc 17905709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 199
Target Start/End: Original strand, 3345765 - 3345798
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||||||||||||||||||||    
T  3345765 agtgtgtttggatgggggaatgttttgagggaat 3345798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 8735842 - 8735899
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||   ||||||||||||||| |||||||  ||||||||||    
T  8735842 ttagagtgtgtttggatgggaacatgttttgagggaatataatgttacgagggaattc 8735899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 199
Target Start/End: Complemental strand, 8736498 - 8736461
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    |||||||||||||||||| |||||||||||||||||||    
T  8736498 ttagagtgtgtttggatgagggaatgttttgagggaat 8736461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 199
Target Start/End: Complemental strand, 11824819 - 11824786
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||||||||||||||||||||    
T  11824819 agtgtgtttggatgggggaatgttttgagggaat 11824786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 199
Target Start/End: Original strand, 21504466 - 21504503
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  21504466 ttagagtgtgtttggatcggggaatgttttgagggaat 21504503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 165 - 218
Target Start/End: Complemental strand, 30751418 - 30751365
Alignment:
Q  165 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaatt 218  Q
    ||||||||||||||| | ||||||||||||  |||||||||||||||| |||||    
T  30751418 gagtgtgtttggatgagagaatgttttgagataatgtaatgttttgagtgaatt 30751365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 199
Target Start/End: Complemental strand, 11684731 - 11684696
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||| ||||||||||||||||||    
T  11684731 agagtgtgtttggatggaggaatgttttgagggaat 11684696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 14954266 - 14954321
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||| | ||||||||||||| ||||||||| |||| || ||||||    
T  14954266 agagtgtgtttggatagaggaatgttttgagtgaatgtaatcttttaagagaattc 14954321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 199
Target Start/End: Complemental strand, 19231336 - 19231305
Alignment:
Q  168 tgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||||||||||||||||||    
T  19231336 tgtgtttggatgggggaatgttttgagggaat 19231305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 199
Target Start/End: Original strand, 20935722 - 20935759
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  20935722 tttagagtgtgtttggat-ggggaatgttttgagggaat 20935759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 199
Target Start/End: Complemental strand, 3345889 - 3345852
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  3345889 ttagagcgtgtttggatggggaaatgttttgagggaat 3345852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 199
Target Start/End: Original strand, 11595339 - 11595372
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||| ||||||||||||||||    
T  11595339 agtgtgtttggatggggtaatgttttgagggaat 11595372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 199
Target Start/End: Original strand, 11607241 - 11607274
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||| ||||||||||||||||    
T  11607241 agtgtgtttggatggggtaatgttttgagggaat 11607274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 210
Target Start/End: Complemental strand, 39478017 - 39477976
Alignment:
Q  169 gtgtttggatgggggaatgttttgagggaatgtaatgttttg 210  Q
    ||||||||||| | ||||||||||||| ||||||||||||||    
T  39478017 gtgtttggatgtgagaatgttttgaggtaatgtaatgttttg 39477976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 40026061 - 40026118
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaatt 218  Q
    |||||| | |||||| |||||||||| |||||||| ||| ||||||||||||| ||||    
T  40026061 tttagaatatgtttgaatgggggaatattttgaggtaatataatgttttgaggaaatt 40026118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 199
Target Start/End: Complemental strand, 44205711 - 44205678
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||| ||||||||||||||||    
T  44205711 agtgtgtttggatggggaaatgttttgagggaat 44205678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 219
Target Start/End: Complemental strand, 32839694 - 32839666
Alignment:
Q  191 tgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||||||||||||    
T  32839694 tgagggaatgtaatgttttgagggaattc 32839666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 2e-23; HSPs: 48)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 40110737 - 40110792
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40110737 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 40110792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 43955517 - 43955572
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43955517 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 43955572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 43955676 - 43955618
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43955676 tttatagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 43955618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 6498826 - 6498769
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6498826 ttagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattc 6498769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 26162198 - 26162141
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  26162198 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattc 26162141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 28539229 - 28539172
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  28539229 ttagagtgtgtttggatgggggaatgttttgagggaatgtattgttttgagggaattc 28539172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 2057395 - 2057450
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2057395 agagtgtgtttggatgggggaatgttttgagcgaatgtaatgttttgagggaattc 2057450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 31632722 - 31632777
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  31632722 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgagggaattc 31632777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 162 - 213
Target Start/End: Complemental strand, 34399010 - 34398959
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagg 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34399010 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagg 34398959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 35455801 - 35455859
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  35455801 tttagagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattc 35455859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 2057556 - 2057499
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  2057556 ttagagtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattc 2057499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 5644838 - 5644781
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  5644838 ttagagtgtgtttggatgggggaacgttttgaggtaatgtaatgttttgagggaattc 5644781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 23548676 - 23548615
Alignment:
Q  158 acatttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| |||||    
T  23548676 acatttagagtgtgtttggatggaggaatgttttgagggaatgtattgttttgaggaaattc 23548615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 155 - 219
Target Start/End: Original strand, 29065810 - 29065874
Alignment:
Q  155 attacatttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||| || |||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  29065810 attaccttaagagtgtgtttggatggatgaatgttttgagggaatgtaatgttttgagggaattc 29065874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 5644677 - 5644732
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  5644677 agagtgtgtttgaatggaggaatgttttgagggaatgtaatgttttgagggaattc 5644732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 14603321 - 14603266
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  14603321 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattc 14603266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 35777014 - 35776959
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  35777014 agagtgtgtttggatgagggaatgttttgagggaatgtaatgttatgagggaattc 35776959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 39342701 - 39342646
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  39342701 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattc 39342646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 40110897 - 40110842
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||    
T  40110897 agagtgtgtttggatggggaaatgtttcgagggaatgtaatgttttgagggaattc 40110842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 219
Target Start/End: Complemental strand, 9784989 - 9784935
Alignment:
Q  165 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||    
T  9784989 gagtgtgtttggatggaggaatgttttgagggaatgtattgttttgagggaattc 9784935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 29065981 - 29065923
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||| |||||||||| ||| |||||||||||||||||||||||    
T  29065981 tttagagtgtgtttggatggaggaatgttttaaggtaatgtaatgttttgagggaattc 29065923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 23455308 - 23455251
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||| |||||||||||| |||||||||||||||||||||| ||||||||||||||||    
T  23455308 ttagaatgtgtttggatgagggaatgttttgagggaatgtattgttttgagggaattc 23455251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 25189285 - 25189230
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||| ||||||||||||||| |||| ||||||||||||||||||    
T  25189285 agagtgtgtttggatgtgggaatgttttgaggtaatgcaatgttttgagggaattc 25189230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 34388426 - 34388369
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||| |||  ||||||||||||||||||||||| ||||||||||||||    
T  34388426 ttagagtgtgtttgaatgatggaatgttttgagggaatgtaatattttgagggaattc 34388369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 218
Target Start/End: Complemental strand, 21636038 - 21635990
Alignment:
Q  170 tgtttggatgggggaatgttttgagggaatgtaatgttttgagggaatt 218  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  21636038 tgtttggatggggaaatgttttgagggaatgtaatgttttgaaggaatt 21635990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 29639274 - 29639219
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||| |||||||||||||||||| ||||||||||||||| ||||| |||||    
T  29639274 agagtgtgtatggatgggggaatgttttcagggaatgtaatgttatgaggaaattc 29639219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 30524255 - 30524310
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||| ||||||| | |||||||||| |||||||||||||||||||||||||    
T  30524255 agagtgtgtatggatggagtaatgttttgaaggaatgtaatgttttgagggaattc 30524310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 30629061 - 30629111
Alignment:
Q  168 tgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaatt 218  Q
    ||||||||||||||||||||||||||||||||||| |||||| || |||||    
T  30629061 tgtgtttggatgggggaatgttttgagggaatgtattgttttaagagaatt 30629111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 214
Target Start/End: Complemental strand, 40854129 - 40854079
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggg 214  Q
    ||||||||||||||||||| |||||| |||||||||||||| |||||||||    
T  40854129 agagtgtgtttggatggggaaatgttctgagggaatgtaatattttgaggg 40854079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 199
Target Start/End: Original strand, 40853985 - 40854022
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||||||||||||||||||||||||    
T  40853985 ttagagtgtgtttggatgggggaatgttttgagggaat 40854022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 163 - 219
Target Start/End: Complemental strand, 18789306 - 18789250
Alignment:
Q  163 tagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||| ||||| ||||||| |||| ||||||| |||||||||||    
T  18789306 tagagtgtgtttggatggaggaatattttgagagaatataatgttatgagggaattc 18789250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 21635885 - 21635940
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||| ||||||||| |||| |||||||| |||||||||||||||||| ||||    
T  21635885 agagtgtgcttggatgggagaatattttgaggtaatgtaatgttttgaggggattc 21635940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 29195709 - 29195756
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttga 211  Q
    ||||||||||||||||| ||||| |||||||| |||||||||||||||    
T  29195709 agagtgtgtttggatggaggaatattttgaggtaatgtaatgttttga 29195756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 199
Target Start/End: Original strand, 31913236 - 31913271
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||||||||||||||||||||||    
T  31913236 agagtgtgtttggatgggggaatgttttgagggaat 31913271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 44915195 - 44915250
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||| | |||| ||||||||||| |||||||||||| |||||||    
T  44915195 agagtgtgtttggatgagagaattttttgagggaacgtaatgttttgaaggaattc 44915250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 173 - 219
Target Start/End: Complemental strand, 22351922 - 22351876
Alignment:
Q  173 ttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||| || |||||||||||||||| ||||||    
T  22351922 ttggatgggggaatgttttggggtaatgtaatgttttgagagaattc 22351876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 199
Target Start/End: Complemental strand, 30587943 - 30587909
Alignment:
Q  165 gagtgtgtttggatgggggaatgttttgagggaat 199  Q
    |||||||||||||||||||||||||||||||||||    
T  30587943 gagtgtgtttggatgggggaatgttttgagggaat 30587909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 161 - 195
Target Start/End: Complemental strand, 31913343 - 31913309
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagg 195  Q
    |||||||||||||||||||||||||||||||||||    
T  31913343 tttagagtgtgtttggatgggggaatgttttgagg 31913309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 199
Target Start/End: Complemental strand, 13815037 - 13815000
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  13815037 ttagagtgtgtttggataggggaatgttttgagggaat 13815000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 22391644 - 22391592
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaatt 218  Q
    |||||||||| ||| |  ||||||||||||||||||||||||||||| |||||    
T  22391644 agtgtgtttgaatgagataatgttttgagggaatgtaatgttttgagagaatt 22391592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 195
Target Start/End: Complemental strand, 30080842 - 30080811
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagg 195  Q
    ||||||||||||||||||||||||||||||||    
T  30080842 agagtgtgtttggatgggggaatgttttgagg 30080811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 34388265 - 34388320
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||| ||| |||||||| || |||||||| |||| ||||||    
T  34388265 agagtgtgtttggatggggaaatattttgaggaaaagtaatgttctgagagaattc 34388320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 153 - 212
Target Start/End: Complemental strand, 46482115 - 46482056
Alignment:
Q  153 aaattacatttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgag 212  Q
    |||||||  |||||||||||||| |||| | ||||| |||| ||||||||||||||||||    
T  46482115 aaattactcttagagtgtgtttgaatggagaaatgtgttgaaggaatgtaatgttttgag 46482056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 49052786 - 49052840
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||| |  |||||||||||| |||||||||||||||| ||||||    
T  49052786 agagtgtgtttggatgagaaaatgttttgagg-aatgtaatgttttgagtgaattc 49052840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 18926861 - 18926812
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggga 215  Q
    ||||||||| |||||||| |  |||||||| |||||||||||||||||||    
T  18926861 agtgtgttttgatggggggacattttgaggtaatgtaatgttttgaggga 18926812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 199
Target Start/End: Original strand, 32650589 - 32650626
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||| ||||| ||||||||||||||||||    
T  32650589 ttagagtgtgtttcgatggaggaatgttttgagggaat 32650626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 199
Target Start/End: Original strand, 40667357 - 40667394
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||||||  ||||||||||||||||    
T  40667357 ttagagtgtgtttggatgggaaaatgttttgagggaat 40667394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 190 - 219
Target Start/End: Original strand, 43791116 - 43791145
Alignment:
Q  190 ttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||    
T  43791116 ttgagggaatgtaatgttttgagggaattc 43791145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 2e-23; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 15374119 - 15374064
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15374119 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 15374064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 40643976 - 40643921
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40643976 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 40643921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 22766949 - 22767007
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22766949 tttagagtgtgtttggatgggggaatgttttgagggaatataatgttttgagggaattc 22767007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 26281342 - 26281284
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  26281342 tttagagtgtgtttggatgggggaacgttttgagggaatgtaatgttttgagggaattc 26281284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 28828369 - 28828423
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattct 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28828369 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattct 28828423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 2721628 - 2721575
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2721628 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 2721575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 9764499 - 9764442
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9764499 ttagagtgtgtttggatgggggaatgtttcgagggaatgtaatgttttgagggaattc 9764442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 22303942 - 22303885
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  22303942 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaaggaattc 22303885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 37722966 - 37722909
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  37722966 ttagagtgtgtttggatgggggaatattttgagggaatgtaatgttttgagggaattc 37722909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 2316378 - 2316433
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2316378 agagtgtgtttggatgggggaatgttttgagggaatgtaatattttgagggaattc 2316433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 15804322 - 15804377
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  15804322 agagtgtgtttggatgggggaatgttttgagggaatgtagtgttttgagggaattc 15804377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 165 - 219
Target Start/End: Original strand, 3563278 - 3563332
Alignment:
Q  165 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  3563278 gagtgtgtttggataggggaatgttttgagggaatgtaatgttttgagggaattc 3563332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 165 - 219
Target Start/End: Complemental strand, 20523291 - 20523237
Alignment:
Q  165 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  20523291 gagtgtgtttggatgggggaatgttttgagagaatgtaatgttttgagggaattc 20523237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 15804451 - 15804399
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaatt 218  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15804451 agtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaatt 15804399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 927302 - 927357
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||    
T  927302 agagtgtgtttggatggggaaatgttttgagggaatgtattgttttgagggaattc 927357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 9764338 - 9764393
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  9764338 agagtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattc 9764393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 25935360 - 25935305
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  25935360 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttatgaggaaattc 25935305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 40090484 - 40090429
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  40090484 agagtgtgtttggatgggggaatgttttgaggaaatgtaatgttttgatggaattc 40090429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 41762285 - 41762230
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  41762285 agagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattc 41762230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 15373958 - 15374015
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||    
T  15373958 ttagagtgtgtttggatggaagaattttttgagggaatgtaatgttttgagggaattc 15374015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 19533975 - 19533922
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  19533975 agtgtgtttggatggaggaatgttttgagggaatgtaatgttatgagggaattc 19533922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 20523131 - 20523188
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||| |||||||||||||||||||||| || |||||||||||    
T  20523131 ttagagtgtgtttggatgggagaatgttttgagggaatgtaatattctgagggaattc 20523188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 6634015 - 6634070
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||| || |||||||| |||||||||||||||||||||||    
T  6634015 agagtgtgtttggatggggggatattttgaggtaatgtaatgttttgagggaattc 6634070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 16515177 - 16515122
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||| | ||||||||| |||||||||||||||||||||||||||    
T  16515177 agagtgtgtttggatgagagaatgtttttagggaatgtaatgttttgagggaattc 16515122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 215
Target Start/End: Complemental strand, 23092121 - 23092070
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggga 215  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  23092121 agagtgtgtttggatgggggaatgttttgaacgaatgtaatgttttgaggga 23092070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 32250167 - 32250113
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  32250167 agagtgtgtttggatgggg-aatgttttgagggaaagtaatgttttgagggaattc 32250113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 165 - 212
Target Start/End: Complemental strand, 33245441 - 33245394
Alignment:
Q  165 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgag 212  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  33245441 gagtgtgtttggatgggggaatgttttgatggaatgtaatgttttgag 33245394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 34982216 - 34982270
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||    
T  34982216 agagtgtgtttggataggggaatgttttgagggaatgt-atgttttgagggaattc 34982270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 40809341 - 40809396
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||    
T  40809341 agagtgtgtttggatggggaaatgttttgagagaatataatgttttgagggaattc 40809396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 13243457 - 13243514
Alignment:
Q  164 agagtgtgtttg--gatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||    
T  13243457 agagtgtgtttgtggatgagggaatgttttgagggaatgtaatgttttgagggaattc 13243514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 28828504 - 28828451
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||| ||| |||||||| |||||||||||||||||||||||    
T  28828504 agtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaattc 28828451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 32389974 - 32390027
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||| ||||||||||||| |||||||||| ||||||||||||||    
T  32389974 agtgtgtttggatgagggaatgttttgaaggaatgtaatattttgagggaattc 32390027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 35379342 - 35379398
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||    
T  35379342 ttagagtgtgtttggatgggg-aatgttttgagataatgtaatgttttgagggaattc 35379398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 37145569 - 37145516
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||| ||||||    
T  37145569 agtgggtttggatgggggaatgttttgagggaatgtaatgttatgagagaattc 37145516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 40809502 - 40809445
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||| ||||||| ||||||||||| ||||||||||||||||| ||||||    
T  40809502 ttagagtgtgtttagatggggaaatgttttgagagaatgtaatgttttgagtgaattc 40809445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 213
Target Start/End: Complemental strand, 13243566 - 13243514
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagg 213  Q
    |||| ||||||||||||||||||||| |||||||| |||||||||||||||||    
T  13243566 tttatagtgtgtttggatgggggaatattttgaggtaatgtaatgttttgagg 13243514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 168 - 207
Target Start/End: Complemental strand, 9894388 - 9894349
Alignment:
Q  168 tgtgtttggatgggggaatgttttgagggaatgtaatgtt 207  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  9894388 tgtgtttggatgggggaatgttttgagggaatgtaatgtt 9894349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 32390131 - 32390076
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||  | |||| ||||||||||||||||||||||||||||||||    
T  32390131 agagtgtgtttggattagagaattttttgagggaatgtaatgttttgagggaattc 32390076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 32470882 - 32470937
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||| ||||||||| | |||||||||||||||||||||||||||| |||||||    
T  32470882 agagtgtatttggatggagaaatgttttgagggaatgtaatgttttgaaggaattc 32470937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 2316540 - 2316483
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||   ||||||||||||||||||||||||||||| ||||||    
T  2316540 tttagagtgtgtttggatggaa-aatgttttgagggaatgtaatgttttgagagaattc 2316483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 209
Target Start/End: Original strand, 5658776 - 5658821
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtttt 209  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  5658776 agagtgtgtttggatggagaaatgttttgagggaatgtaatgtttt 5658821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 23091961 - 23092017
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||| ||||||| ||| |||||||||||||||||||||||| |||||||    
T  23091961 ttagagtgtgttttgatgggg-aatattttgagggaatgtaatgttttgaaggaattc 23092017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 199
Target Start/End: Original strand, 33146059 - 33146096
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||||||||||||||||||||||||    
T  33146059 ttagagtgtgtttggatgggggaatgttttgagggaat 33146096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 199
Target Start/End: Original strand, 33146189 - 33146226
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||||||||||||||||||||||||    
T  33146189 ttagagtgtgtttggatgggggaatgttttgagggaat 33146226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 199
Target Start/End: Original strand, 2550328 - 2550363
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||||||||||||||||||||||    
T  2550328 agagtgtgtttggatgggggaatgttttgagggaat 2550363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 217
Target Start/End: Original strand, 14834826 - 14834877
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaat 217  Q
    |||||||||| ||||| |||||||| |||||||||||||||||| |||||||    
T  14834826 agtgtgtttgcatgggagaatgtttcgagggaatgtaatgttttaagggaat 14834877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 219
Target Start/End: Original strand, 16515009 - 16515059
Alignment:
Q  168 tgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||| | |||||||||||||||||||| |||||||||||||||    
T  16515009 tgtgtttggatggag-aatgttttgagggaatgtaaggttttgagggaattc 16515059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 199
Target Start/End: Original strand, 22305112 - 22305147
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||||||||||||||||||||||    
T  22305112 agagtgtgtttggatgggggaatgttttgagggaat 22305147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 32471041 - 32470986
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||| || ||| ||  ||||||||||||||||||||||||||||    
T  32471041 ttagagtgtgtttggatgtggaaatctt--gagggaatgtaatgttttgagggaattc 32470986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 199
Target Start/End: Original strand, 22302537 - 22302574
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  22302537 ttagagtgtgtttggatggggtaatgttttgagggaat 22302574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 199
Target Start/End: Complemental strand, 34982350 - 34982313
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  34982350 ttagagtgtgtttggatggaggaatgttttgagggaat 34982313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 199
Target Start/End: Complemental strand, 15270906 - 15270871
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||| ||||||||||||||||||    
T  15270906 agagtgtgtttggatggaggaatgttttgagggaat 15270871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 199
Target Start/End: Complemental strand, 12064519 - 12064485
Alignment:
Q  165 gagtgtgtttggatgggggaatgttttgagggaat 199  Q
    |||||||||| ||||||||||||||||||||||||    
T  12064519 gagtgtgttttgatgggggaatgttttgagggaat 12064485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 172 - 213
Target Start/End: Complemental strand, 12991374 - 12991333
Alignment:
Q  172 tttggatgggggaatgttttgagggaatgtaatgttttgagg 213  Q
    |||||||| ||||||||||||||| || ||||||||||||||    
T  12991374 tttggatgagggaatgttttgaggtaaagtaatgttttgagg 12991333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 20320716 - 20320663
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||   ||||||||||| |||||||||| |||| |||||||||    
T  20320716 agtgtgtttggatgaatgaatgttttgaaggaatgtaatattttaagggaattc 20320663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 194
Target Start/End: Original strand, 34105086 - 34105119
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgag 194  Q
    |||||||||||||||||||| |||||||||||||    
T  34105086 tttagagtgtgtttggatggaggaatgttttgag 34105119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 50)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 33902664 - 33902722
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  33902664 tttagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgagggaattc 33902722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 3853614 - 3853671
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3853614 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattc 3853671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 3858072 - 3858129
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3858072 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggaaattc 3858129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 17110869 - 17110924
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17110869 agagtgtgtttggatggggaaatgttttgagggaatgtaatgttttgagggaattc 17110924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 42711439 - 42711384
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  42711439 agagtgtgtttggattggggaatgttttgagggaatgtaatgttttgagggaattc 42711384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 44889351 - 44889409
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||    
T  44889351 tttagagtgtgtttggatggaggaatgttttgagggaatataatgttttgagggaattc 44889409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 14800121 - 14800064
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||    
T  14800121 ttagagtgtgtttggatgggggaatattttgagggaaagtaatgttttgagggaattc 14800064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 17111030 - 17110973
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  17111030 ttagagtgtgtttggatggagaaatgttttgagggaatgtaatgttttgagggaattc 17110973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 24044958 - 24045015
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  24044958 ttagagtgtgtttggatgagggaatgttttgagggaatgtaatgttttgaaggaattc 24045015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 28324747 - 28324690
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  28324747 ttagagtgtgtttggatggaggaatgttttgagggaatgtaatgttttgaaggaattc 28324690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 162 - 219
Target Start/End: Complemental strand, 29257436 - 29257379
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  29257436 ttagagtgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattc 29257379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 14991692 - 14991747
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  14991692 agagtgtgtttggatgggggaatgttttgaggtaatgtaatgttttgaggcaattc 14991747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 33377380 - 33377325
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  33377380 agagtgtgtttggatgggggaatgttttgagggaatatattgttttgagggaattc 33377325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 40046804 - 40046859
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||  |||||||||||||||||||||||||||||||||||||    
T  40046804 agagtgtgtttggatggatgaatgttttgagggaatgtaatgttttgagggaattc 40046859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 161 - 219
Target Start/End: Complemental strand, 44346764 - 44346706
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||||    
T  44346764 tttagaatgtgtttggatgggggaatgttttgagggaatgtattgttttaagggaattc 44346706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 4156324 - 4156271
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||    
T  4156324 agtgtgtttggatgggagaatattttgagggaatgtaatgttttgagggaattc 4156271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 29482888 - 29482835
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  29482888 agtgtgtttggatgggggaatgttttgagggaacgtattgttttgagggaattc 29482835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 218
Target Start/End: Complemental strand, 37268169 - 37268112
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaatt 218  Q
    |||||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||    
T  37268169 tttagagtgtgtttggataggggaatattttgaggtaatgtaatgttttgagggaatt 37268112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 23011734 - 23011789
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||    
T  23011734 agagtgtgtttggacgggagaatgttttgagggaatgtaatgttatgagggaattc 23011789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 36103101 - 36103156
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||    
T  36103101 agagtgtgtttggatggaggaatgttttgagggaatgtaatgttttaaggaaattc 36103156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 215
Target Start/End: Complemental strand, 515618 - 515564
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgaggga 215  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||| |||||    
T  515618 tttagagtgtgtttggatggaggaatgttttgaaggaatgtaatgttttaaggga 515564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 13404824 - 13404882
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||| ||||||||||||||||| ||| |||||||| |||||||||||||||||||||||    
T  13404824 tttatagtgtgtttggatggggaaatattttgaggtaatgtaatgttttgagggaattc 13404882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 219
Target Start/End: Complemental strand, 13404976 - 13404931
Alignment:
Q  174 tggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  13404976 tggataggggaatgttttgagggaatgtaatgttttgagggaattc 13404931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 209
Target Start/End: Complemental strand, 27322732 - 27322687
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgtttt 209  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  27322732 agagtgtgtttggatgggagaatgttttgagggaatgtaatgtttt 27322687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 164 - 212
Target Start/End: Complemental strand, 32626117 - 32626069
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgag 212  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||    
T  32626117 agagtgtgcttggatgggggaatcttttgagggaatgtaatgttttgag 32626069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 14239 - 14293
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||| ||||||| |||||||||||||||||| |||||||||    
T  14239 agagtgtgtttggatgggg-aatgtttggagggaatgtaatgttttaagggaattc 14293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 31807409 - 31807463
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||| | ||||||||||||| |||||||||||||||||||||||    
T  31807409 agagtgtgtttggatgagagaatgttttgagg-aatgtaatgttttgagggaattc 31807463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 33986004 - 33986059
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||| |||| | |||||||||||||||| ||||||    
T  33986004 agagtgtgtttggatgggggaatgtcttgaagtaatgtaatgttttgagagaattc 33986059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 168 - 218
Target Start/End: Original strand, 30435250 - 30435300
Alignment:
Q  168 tgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaatt 218  Q
    ||||||||||||| | ||||||||||||||||||||||||| |||||||||    
T  30435250 tgtgtttggatggagaaatgttttgagggaatgtaatgtttggagggaatt 30435300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 3853773 - 3853720
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||| ||| |||||||| |||||||||||| ||||||||||    
T  3853773 agtgtgtttggatggggaaatattttgaggtaatgtaatgtttggagggaattc 3853720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 3858231 - 3858178
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||| ||| |||||||| |||||||||||| ||||||||||    
T  3858231 agtgtgtttggatggggaaatattttgaggtaatgtaatgtttggagggaattc 3858178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 170 - 219
Target Start/End: Original strand, 8689138 - 8689187
Alignment:
Q  170 tgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||| | |||||||||| |||||||||||||||||||||||||    
T  8689138 tgtttggatggagaaatgttttgaaggaatgtaatgttttgagggaattc 8689187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 199
Target Start/End: Original strand, 29611386 - 29611423
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||||||||||||||||||||||||    
T  29611386 ttagagtgtgtttggatgggggaatgttttgagggaat 29611423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 162 - 199
Target Start/End: Original strand, 34008797 - 34008834
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||||||||||||||||||||||||    
T  34008797 ttagagtgtgtttggatgggggaatgttttgagggaat 34008834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 179 - 219
Target Start/End: Original strand, 8049269 - 8049309
Alignment:
Q  179 gggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  8049269 gggggaatgttttgagggaatataatgttttgagggaattc 8049309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 167 - 219
Target Start/End: Complemental strand, 35979084 - 35979032
Alignment:
Q  167 gtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||| ||||||||||||||||||||||| ||  ||||||||||    
T  35979084 gtgtgtttggatggaggaatgttttgagggaatgtaatcttaagagggaattc 35979032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 1088360 - 1088305
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||| ||| ||||||||||||| ||||||| |||||||||| |||||    
T  1088360 agagtgtgtttgggtggaggaatgttttgagagaatgtattgttttgaggaaattc 1088305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 199
Target Start/End: Original strand, 14799979 - 14800014
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||||||||||||||||||||||    
T  14799979 agagtgtgtttggatgggggaatgttttgagggaat 14800014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 33902825 - 33902771
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||| |||||||||||||||| ||||||||||  ||||||||||||||||    
T  33902825 agagtgtgttgggatgggggaatgttt-gagggaatgttttgttttgagggaattc 33902771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 181 - 219
Target Start/End: Complemental strand, 40046932 - 40046894
Alignment:
Q  181 gggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  40046932 gggaatgttttgaggtaatgtaatgttttgagggaattc 40046894  T

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Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 162 - 199
Target Start/End: Complemental strand, 7202971 - 7202934
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  7202971 ttagagtgtgtttggatggaggaatgttttgagggaat 7202934  T

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Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 158 - 219
Target Start/End: Complemental strand, 11744808 - 11744747
Alignment:
Q  158 acatttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||| |||||||||||||||| | |||| ||| |||||||||||||||| ||| |||||||    
T  11744808 acattaagagtgtgtttggatgagagaatatttagagggaatgtaatgttgtgaaggaattc 11744747  T

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Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 199
Target Start/End: Complemental strand, 30435386 - 30435350
Alignment:
Q  163 tagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    |||||||||||||||||||| ||||||||||||||||    
T  30435386 tagagtgtgtttggatggggaaatgttttgagggaat 30435350  T

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Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 199
Target Start/End: Complemental strand, 30444998 - 30444963
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||| ||||||||||||||||||    
T  30444998 agagtgtgtttggatggaggaatgttttgagggaat 30444963  T

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Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 199
Target Start/End: Original strand, 42739949 - 42739984
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||||||| ||||||||||||||||||    
T  42739949 agagtgtgtttggatggaggaatgttttgagggaat 42739984  T

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Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 161 - 199
Target Start/End: Complemental strand, 8409985 - 8409947
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  8409985 tttagagtgtgtttggatggaggaatgttttaagggaat 8409947  T

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Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 218
Target Start/End: Original strand, 9982634 - 9982690
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaatt 218  Q
    ||||||| |||||||||||| | |||||||| ||| |||||||||||||||| |||||    
T  9982634 tttagagcgtgtttggatggag-aatgttttaaggtaatgtaatgttttgagagaatt 9982690  T

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Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 165 - 194
Target Start/End: Original strand, 34388527 - 34388556
Alignment:
Q  165 gagtgtgtttggatgggggaatgttttgag 194  Q
    ||||||||||||||||||||||||||||||    
T  34388527 gagtgtgtttggatgggggaatgttttgag 34388556  T

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Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 162 - 195
Target Start/End: Original strand, 42711302 - 42711335
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagg 195  Q
    ||||||||||||||||||||| ||||||||||||    
T  42711302 ttagagtgtgtttggatggggaaatgttttgagg 42711335  T

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Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 199
Target Start/End: Complemental strand, 26520501 - 26520469
Alignment:
Q  167 gtgtgtttggatgggggaatgttttgagggaat 199  Q
    ||||||||||||| |||||||||||||||||||    
T  26520501 gtgtgtttggatgagggaatgttttgagggaat 26520469  T

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Target: scaffold1562 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 166 - 219
Target Start/End: Complemental strand, 562 - 509
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  562 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 509  T

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Target: scaffold1562; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 405 - 460
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||| |||||||||||  |||||||||||||||||||    
T  405 agagtgtgtttggatgggggaatattttgagggaaaataatgttttgagggaattc 460  T

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Target: scaffold1158 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 2031 - 2084
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2031 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 2084  T

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Target: scaffold1158; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 2188 - 2133
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||||| |||||||||||  |||||||||||||||||||    
T  2188 agagtgtgtttggatgggggaatattttgagggaaaataatgttttgagggaattc 2133  T

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Target: scaffold0009 (Bit Score: 51; Significance: 2e-20; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 161 - 219
Target Start/End: Original strand, 41994 - 42052
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||    
T  41994 tttagagtgtgtttgaatggaggaatgttttgagggaatgtaatgttttgagggaattc 42052  T

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Target: scaffold0009; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 42137 - 42082
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||    
T  42137 agagtgtgtttggatgggggaacgttttgagggaatgtaatgttttgagagaattc 42082  T

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Target: scaffold0048 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 82945 - 82998
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  82945 agtgtgtttggatgggtgaatgttttgagggaatgtaatgttttgagggaattc 82998  T

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Target: scaffold0318 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 162 - 219
Target Start/End: Original strand, 2865 - 2922
Alignment:
Q  162 ttagagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||||||    
T  2865 ttagagtgtgtttagatgggggaatgtttcgagagaatgtaatgttttgagggaattc 2922  T

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Target: scaffold0400 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 219
Target Start/End: Complemental strand, 4570 - 4516
Alignment:
Q  165 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||    
T  4570 gagtgtgtttggatgagggaatgttttgagggaatataatgttttgaggaaattc 4516  T

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Target: scaffold0365 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 165 - 219
Target Start/End: Complemental strand, 5214 - 5160
Alignment:
Q  165 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||    
T  5214 gagtgtgtttggatgagggaatgttttgagggaatataatgttttgaggaaattc 5160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 7153 - 7206
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||| ||||||||||||||||||||| |||||| |||||||||    
T  7153 agtgtgtttggatggaggaatgttttgagggaatgtattgttttaagggaattc 7206  T

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Target: scaffold0169 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 164 - 219
Target Start/End: Original strand, 4075 - 4130
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||||||   ||||||||||||| ||||||||||||||||||||||||    
T  4075 agagtgtgtttggataaaggaatgttttgagagaatgtaatgttttgagggaattc 4130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 213
Target Start/End: Original strand, 19200 - 19247
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagg 213  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||    
T  19200 agtgtgtttggatgggggagtattttgagggaatgtaatgttttgagg 19247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 209
Target Start/End: Complemental strand, 19855 - 19813
Alignment:
Q  166 agtgtgtttggatgggggaatgttttgagggaatgtaatgtttt 209  Q
    ||||||||||||||||||| ||||||||||||||||||||||||    
T  19855 agtgtgtttggatggggga-tgttttgagggaatgtaatgtttt 19813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 168 - 219
Target Start/End: Complemental strand, 56429 - 56378
Alignment:
Q  168 tgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    |||||||||||| |||||| ||||||||||| ||||||||||||||||||||    
T  56429 tgtgtttggatgagggaatattttgagggaaagtaatgttttgagggaattc 56378  T

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Target: scaffold0240 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 157 - 199
Target Start/End: Complemental strand, 17647 - 17605
Alignment:
Q  157 tacatttagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  17647 tacacttagagtgtgtttggatgggggaatgttttgagggaat 17605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 161 - 199
Target Start/End: Original strand, 109046 - 109084
Alignment:
Q  161 tttagagtgtgtttggatgggggaatgttttgagggaat 199  Q
    |||||||||||||||||||||||||||||||||||||||    
T  109046 tttagagtgtgtttggatgggggaatgttttgagggaat 109084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 165 - 219
Target Start/End: Original strand, 10887 - 10941
Alignment:
Q  165 gagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||| ||||  ||||||||| |||||||||||||||||||||||||||    
T  10887 gagtgtgtttgaatggaagaatgttttaagggaatgtaatgttttgagggaattc 10941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 15936 - 15882
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||| ||||||| |||||||||||| | |||| ||||||    
T  15936 agagtgtgtttggatgggggattgttttg-gggaatgtaatgctatgagagaattc 15882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 164 - 219
Target Start/End: Complemental strand, 2978 - 2924
Alignment:
Q  164 agagtgtgtttggatgggggaatgttttgagggaatgtaatgttttgagggaattc 219  Q
    ||||||||||||||||||||| ||||||| |||||||||||| | |||| ||||||    
T  2978 agagtgtgtttggatgggggattgttttg-gggaatgtaatgctatgagagaattc 2924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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