View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5185_high_2 (Length: 248)
Name: NF5185_high_2
Description: NF5185
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5185_high_2 |
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Alignment Details
Target: chr4 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 13 - 232
Target Start/End: Original strand, 37908369 - 37908588
Alignment:
| Q |
13 |
gaactcacaaaattcccaccttcagtaaacaaattattcttcgacaacaaatgatccctaatcctttgatccaacgaggtggccaccatctcagctggtc |
112 |
Q |
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| T |
37908369 |
gaactcacaaaattcccaccttcagtaaacaaattattcttggacaacaaatgatccctaatcctttgatccaacgaggtggccaccatctcagctggtc |
37908468 |
T |
|
| Q |
113 |
caccacgaggacacctaataaccggcacaacaccaagcgtcgccaaaacacaaaacaacccattaacaatcctctcaacaatctcctcaatttcacgatc |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37908469 |
caccacgaggacacctaataaccggcacaacaccaagcgtcgccaaaacacaaaacaacccattaacaatcctctcaacaatctcctcaatttcacgatc |
37908568 |
T |
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| Q |
213 |
accagcagacggatcattaa |
232 |
Q |
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|||||||||||||||||||| |
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| T |
37908569 |
accagcagacggatcattaa |
37908588 |
T |
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