View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5186-Insertion-7 (Length: 237)

Name: NF5186-Insertion-7
Description: NF5186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5186-Insertion-7
NF5186-Insertion-7
[»] chr4 (35 HSPs)
chr4 (8-175)||(37992900-37993080)
chr4 (132-173)||(37993172-37993213)
chr4 (18-75)||(40298029-40298086)
chr4 (9-75)||(2908209-2908275)
chr4 (25-75)||(22812066-22812116)
chr4 (9-75)||(51100024-51100090)
chr4 (174-235)||(18872717-18872778)
chr4 (174-205)||(5734648-5734679)
chr4 (174-209)||(7698471-7698506)
chr4 (9-76)||(14347120-14347186)
chr4 (173-208)||(25124249-25124284)
chr4 (173-208)||(31937075-31937110)
chr4 (20-75)||(37461765-37461819)
chr4 (174-209)||(39670988-39671023)
chr4 (18-73)||(50101280-50101335)
chr4 (174-208)||(4415965-4415999)
chr4 (9-63)||(16831111-16831165)
chr4 (174-208)||(20455184-20455218)
chr4 (174-208)||(28501389-28501423)
chr4 (174-208)||(29520167-29520201)
chr4 (174-208)||(32899221-32899255)
chr4 (174-208)||(46949992-46950026)
chr4 (182-237)||(49228692-49228747)
chr4 (174-208)||(49373696-49373730)
chr4 (174-208)||(49793091-49793125)
chr4 (174-208)||(53564359-53564393)
chr4 (174-208)||(55563130-55563164)
chr4 (174-208)||(56432518-56432552)
chr4 (18-75)||(9119299-9119356)
chr4 (174-206)||(21265220-21265252)
chr4 (174-210)||(23777803-23777839)
chr4 (174-206)||(30523764-30523796)
chr4 (173-209)||(31937339-31937375)
chr4 (173-209)||(37780215-37780251)
chr4 (173-209)||(39114889-39114925)
[»] chr1 (24 HSPs)
chr1 (174-237)||(21631081-21631144)
chr1 (9-75)||(39283719-39283785)
chr1 (174-237)||(9413299-9413362)
chr1 (31-72)||(18910404-18910445)
chr1 (173-210)||(41317592-41317629)
chr1 (174-235)||(4280102-4280163)
chr1 (174-209)||(17483733-17483768)
chr1 (173-208)||(25227303-25227338)
chr1 (174-209)||(27037532-27037567)
chr1 (174-209)||(28885842-28885877)
chr1 (173-237)||(29437828-29437892)
chr1 (174-209)||(38613738-38613773)
chr1 (174-208)||(7763752-7763786)
chr1 (174-208)||(25509209-25509243)
chr1 (174-208)||(27037269-27037303)
chr1 (9-75)||(31160775-31160841)
chr1 (174-208)||(42276164-42276198)
chr1 (174-208)||(43456624-43456658)
chr1 (174-207)||(5765994-5766027)
chr1 (173-209)||(6089996-6090032)
chr1 (169-209)||(15892565-15892605)
chr1 (173-209)||(23530808-23530844)
chr1 (174-210)||(28886105-28886141)
chr1 (173-209)||(28888161-28888197)
[»] chr2 (23 HSPs)
chr2 (174-236)||(30857938-30858000)
chr2 (174-237)||(3095299-3095362)
chr2 (174-237)||(12890182-12890245)
chr2 (173-208)||(2060315-2060350)
chr2 (174-209)||(2200242-2200277)
chr2 (174-209)||(18374706-18374741)
chr2 (174-209)||(24345680-24345715)
chr2 (173-208)||(28566150-28566185)
chr2 (173-237)||(36750858-36750922)
chr2 (174-209)||(41422512-41422547)
chr2 (174-209)||(41494624-41494659)
chr2 (174-208)||(7116302-7116336)
chr2 (174-208)||(8912877-8912911)
chr2 (174-208)||(26322296-26322330)
chr2 (174-207)||(5070309-5070342)
chr2 (174-207)||(10757774-10757807)
chr2 (174-207)||(31751069-31751102)
chr2 (174-206)||(2199978-2200010)
chr2 (173-209)||(12889948-12889984)
chr2 (174-206)||(13215825-13215857)
chr2 (174-206)||(23083515-23083547)
chr2 (20-76)||(23788403-23788459)
chr2 (27-75)||(32083097-32083145)
[»] chr5 (17 HSPs)
chr5 (20-72)||(35349395-35349447)
chr5 (174-237)||(7940452-7940515)
chr5 (173-209)||(4976292-4976328)
chr5 (174-210)||(14435830-14435866)
chr5 (174-208)||(3028013-3028047)
chr5 (9-75)||(6102877-6102943)
chr5 (174-208)||(8949812-8949846)
chr5 (174-208)||(19571942-19571976)
chr5 (174-237)||(20142233-20142296)
chr5 (174-208)||(23260141-23260175)
chr5 (174-208)||(23286477-23286511)
chr5 (174-208)||(43060414-43060448)
chr5 (161-210)||(14570891-14570940)
chr5 (173-209)||(8283850-8283886)
chr5 (173-209)||(9268031-9268067)
chr5 (173-209)||(19571668-19571704)
chr5 (173-209)||(35547524-35547560)
[»] chr3 (27 HSPs)
chr3 (174-235)||(32969201-32969262)
chr3 (173-237)||(15996747-15996811)
chr3 (9-72)||(41287884-41287947)
chr3 (174-237)||(10015763-10015826)
chr3 (174-236)||(19897811-19897873)
chr3 (173-209)||(4759087-4759123)
chr3 (173-209)||(45513639-45513675)
chr3 (174-205)||(18658429-18658460)
chr3 (174-209)||(28875253-28875288)
chr3 (174-209)||(42801521-42801556)
chr3 (174-208)||(4759354-4759388)
chr3 (174-208)||(8321925-8321959)
chr3 (174-208)||(24087338-24087372)
chr3 (174-208)||(41392883-41392917)
chr3 (174-208)||(46845495-46845529)
chr3 (18-75)||(34228256-34228313)
chr3 (18-75)||(48252269-48252326)
chr3 (174-236)||(48904238-48904300)
chr3 (174-206)||(12906418-12906450)
chr3 (176-208)||(20918221-20918253)
chr3 (176-208)||(20927183-20927215)
chr3 (173-209)||(28673034-28673070)
chr3 (31-75)||(28709564-28709608)
chr3 (172-208)||(29719713-29719749)
chr3 (173-209)||(46845230-46845266)
chr3 (173-209)||(49383343-49383379)
chr3 (173-209)||(50433127-50433163)
[»] scaffold0011 (1 HSPs)
scaffold0011 (28-75)||(12947-12994)
[»] scaffold0299 (1 HSPs)
scaffold0299 (9-75)||(18014-18080)
[»] scaffold0020 (1 HSPs)
scaffold0020 (174-237)||(164214-164277)
[»] chr8 (18 HSPs)
chr8 (174-237)||(23487064-23487127)
chr8 (174-236)||(44888680-44888742)
chr8 (9-72)||(12958924-12958987)
chr8 (173-208)||(17069847-17069882)
chr8 (173-208)||(17578391-17578426)
chr8 (174-209)||(23688167-23688202)
chr8 (174-208)||(2152243-2152277)
chr8 (174-208)||(5162304-5162338)
chr8 (174-208)||(6050558-6050592)
chr8 (174-208)||(12802611-12802645)
chr8 (174-237)||(18111949-18112012)
chr8 (174-208)||(18641383-18641417)
chr8 (9-75)||(40607347-40607413)
chr8 (174-207)||(45283796-45283829)
chr8 (173-209)||(23687904-23687940)
chr8 (173-209)||(32522583-32522619)
chr8 (173-209)||(40785153-40785189)
chr8 (174-206)||(44580616-44580648)
[»] chr6 (16 HSPs)
chr6 (170-237)||(9038638-9038705)
chr6 (174-237)||(13321300-13321363)
chr6 (174-237)||(31091445-31091508)
chr6 (18-75)||(6770892-6770949)
chr6 (18-75)||(32800263-32800320)
chr6 (9-72)||(2398057-2398120)
chr6 (174-209)||(16122516-16122551)
chr6 (174-208)||(402624-402658)
chr6 (174-208)||(2090658-2090692)
chr6 (173-207)||(13866592-13866626)
chr6 (174-208)||(13901641-13901675)
chr6 (174-208)||(15498629-15498663)
chr6 (174-208)||(23604460-23604494)
chr6 (174-208)||(25045646-25045680)
chr6 (174-208)||(34915546-34915580)
chr6 (182-210)||(16272969-16272997)
[»] chr7 (19 HSPs)
chr7 (173-210)||(31581676-31581713)
chr7 (173-209)||(32118165-32118201)
chr7 (174-209)||(20950779-20950814)
chr7 (20-75)||(24937891-24937946)
chr7 (174-209)||(27813496-27813531)
chr7 (173-237)||(49045094-49045158)
chr7 (174-208)||(2290019-2290053)
chr7 (174-208)||(33381576-33381610)
chr7 (174-208)||(34012520-34012554)
chr7 (170-208)||(41252364-41252402)
chr7 (18-75)||(22555763-22555820)
chr7 (18-75)||(39386963-39387020)
chr7 (174-206)||(1574719-1574751)
chr7 (32-72)||(4037843-4037883)
chr7 (173-209)||(26736749-26736785)
chr7 (173-209)||(27529228-27529264)
chr7 (173-209)||(35569653-35569689)
chr7 (173-209)||(41444465-41444501)
chr7 (174-206)||(42541864-42541896)
[»] scaffold0240 (2 HSPs)
scaffold0240 (173-209)||(18758-18794)
scaffold0240 (174-208)||(18497-18531)
[»] scaffold0163 (1 HSPs)
scaffold0163 (174-209)||(1448-1483)
[»] scaffold0674 (1 HSPs)
scaffold0674 (174-208)||(5151-5185)
[»] scaffold0549 (1 HSPs)
scaffold0549 (174-208)||(10185-10219)
[»] scaffold0161 (1 HSPs)
scaffold0161 (174-208)||(3438-3472)
[»] scaffold0107 (1 HSPs)
scaffold0107 (174-208)||(48654-48688)
[»] scaffold0237 (1 HSPs)
scaffold0237 (174-207)||(6613-6646)


Alignment Details
Target: chr4 (Bit Score: 109; Significance: 6e-55; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 8 - 175
Target Start/End: Original strand, 37992900 - 37993080
Alignment:
Q  8 aattacctattcaaaaatcaaaatttatatttttaaaataaatcttctatttatagattctttaaccagacatttgttagcaagaccaataatataaaat 107  Q
    |||||| || ||||||||||||||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  37992900 aattacttaatcaaaaatcaaaatttatattttcaaaacaaatcttctatttatagattttttaaccagacatttgttagcaagaccaataatataaaat 37992999  T
Q  108 attaaatgagatctatttatacct-------------gtgtcttagatgtatgtgctcttgatatctatggttgcaaggta 175  Q
    ||||||||| ||||||||||||||             ||||||||||||||| ||||||||||||||||||||||||||||    
T  37993000 attaaatgaaatctatttatacctgtcaataatgaaggtgtcttagatgtatatgctcttgatatctatggttgcaaggta 37993080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 132 - 173
Target Start/End: Original strand, 37993172 - 37993213
Alignment:
Q  132 gtgtcttagatgtatgtgctcttgatatctatggttgcaagg 173  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  37993172 gtgtcttagatgtatatgctcttgatatctatggttgcaagg 37993213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 40298029 - 40298086
Alignment:
Q  18 tcaaaaatcaaaatttatatttttaaaataaatcttctatttatagattctttaacca 75  Q
    ||||||||||||| ||||||||| ||||||||| |||||||||||| ||| |||||||    
T  40298029 tcaaaaatcaaaacttatattttcaaaataaattttctatttatagtttcattaacca 40298086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 2908275 - 2908209
Alignment:
Q  9 attacctattcaaaaatcaaaatttatatttttaaaataaatcttctatttatagattctttaacca 75  Q
    ||||| || ||||||||||||||||||||||| || | |||| |||||||||||| ||| |||||||    
T  2908275 attacttactcaaaaatcaaaatttatattttcaagacaaattttctatttatagtttccttaacca 2908209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 25 - 75
Target Start/End: Complemental strand, 22812116 - 22812066
Alignment:
Q  25 tcaaaatttatatttttaaaataaatcttctatttatagattctttaacca 75  Q
    |||||| ||||||||||||||||||| ||||||||| || |||||||||||    
T  22812116 tcaaaacttatatttttaaaataaatattctatttacagtttctttaacca 22812066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 51100090 - 51100024
Alignment:
Q  9 attacctattcaaaaatcaaaatttatatttttaaaataaatcttctatttatagattctttaacca 75  Q
    ||||| || |||||| | |||| ||||||||| ||||||||| |||||||||||||||| |||||||    
T  51100090 attacttaatcaaaagttaaaacttatattttcaaaataaattttctatttatagattccttaacca 51100024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 235
Target Start/End: Original strand, 18872717 - 18872778
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaagnnnnnnnttgtccctttttataaga 235  Q
    ||||||| ||||||||||||||||||||||||||||        ||||||||||||||||||    
T  18872717 tactacctccgtccctaattataagacccttttgaaaaaataatttgtccctttttataaga 18872778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 205
Target Start/End: Complemental strand, 5734679 - 5734648
Alignment:
Q  174 tactacccccgtccctaattataagacccttt 205  Q
    ||||||||||||||||||||||||||||||||    
T  5734679 tactacccccgtccctaattataagacccttt 5734648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 209
Target Start/End: Complemental strand, 7698506 - 7698471
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaa 209  Q
    ||||||| ||||||||||||||||||||||||||||    
T  7698506 tactacctccgtccctaattataagacccttttgaa 7698471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 76
Target Start/End: Complemental strand, 14347186 - 14347120
Alignment:
Q  9 attacctattcaaaaatcaaaatttatatttttaaaataaatcttctatttatagattctttaaccag 76  Q
    ||||| || ||||||||||||| |||||||||||| |||||| || ||||||||| ||| ||||||||    
T  14347186 attacttaatcaaaaatcaaaacttatatttttaagataaat-ttttatttatagtttccttaaccag 14347120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 208
Target Start/End: Complemental strand, 25124284 - 25124249
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttga 208  Q
    |||||||| |||||||||||||||||||||||||||    
T  25124284 gtactacctccgtccctaattataagacccttttga 25124249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 208
Target Start/End: Original strand, 31937075 - 31937110
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttga 208  Q
    |||||||| |||||||||||||||||||||||||||    
T  31937075 gtactacctccgtccctaattataagacccttttga 31937110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 75
Target Start/End: Complemental strand, 37461819 - 37461765
Alignment:
Q  20 aaaaatcaaaatttatatttttaaaataaatcttctatttatagattctttaacca 75  Q
    ||||||||||||||||||||||||||  ||| |||||||||||  |||||||||||    
T  37461819 aaaaatcaaaatttatatttttaaaa-caattttctatttataatttctttaacca 37461765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 209
Target Start/End: Complemental strand, 39671023 - 39670988
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaa 209  Q
    ||||||| ||||||||||||||||||||||||||||    
T  39671023 tactacctccgtccctaattataagacccttttgaa 39670988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 73
Target Start/End: Complemental strand, 50101335 - 50101280
Alignment:
Q  18 tcaaaaatcaaaatttatatttttaaaataaatcttctatttatagattctttaac 73  Q
    ||||||||||||| |||||||||||| | |||| || |||||||||||| ||||||    
T  50101335 tcaaaaatcaaaacttatatttttaagacaaattttttatttatagattttttaac 50101280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Original strand, 4415965 - 4415999
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  4415965 tactacctccgtccctaattataagacccttttga 4415999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 63
Target Start/End: Complemental strand, 16831165 - 16831111
Alignment:
Q  9 attacctattcaaaaatcaaaatttatatttttaaaataaatcttctatttatag 63  Q
    ||||| || |||||| ||||||||||||||||||||| |||| || |||||||||    
T  16831165 attacttaatcaaaagtcaaaatttatatttttaaaacaaattttatatttatag 16831111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 20455218 - 20455184
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  20455218 tactacctccgtccctaattataagacccttttga 20455184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 28501423 - 28501389
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  28501423 tactacctccgtccctaattataagacccttttga 28501389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 29520201 - 29520167
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  29520201 tactacctccgtccctaattataagacccttttga 29520167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 32899255 - 32899221
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  32899255 tactacctccgtccctaattataagacccttttga 32899221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Original strand, 46949992 - 46950026
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  46949992 tactacctccgtccctaattataagacccttttga 46950026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 237
Target Start/End: Complemental strand, 49228747 - 49228692
Alignment:
Q  182 ccgtccctaattataagacccttttgaagnnnnnnnttgtccctttttataagacc 237  Q
    ||||| |||||||||||||||||||||||       ||||||||||||||||||||    
T  49228747 ccgtctctaattataagacccttttgaagaaaaaatttgtccctttttataagacc 49228692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 49373730 - 49373696
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  49373730 tactacctccgtccctaattataagacccttttga 49373696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Original strand, 49793091 - 49793125
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  49793091 tactacctccgtccctaattataagacccttttga 49793125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 53564393 - 53564359
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  53564393 tactacctccgtccctaattataagacccttttga 53564359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 55563164 - 55563130
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  55563164 tactacctccgtccctaattataagacccttttga 55563130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Original strand, 56432518 - 56432552
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  56432518 tactacctccgtccctaattataagacccttttga 56432552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 9119299 - 9119356
Alignment:
Q  18 tcaaaaatcaaaatttatatttttaaaataaatcttctatttatagattctttaacca 75  Q
    |||||| |||||| ||||||||| |  | |||| ||||||||||||||||||||||||    
T  9119299 tcaaaagtcaaaacttatattttcaccacaaattttctatttatagattctttaacca 9119356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Original strand, 21265220 - 21265252
Alignment:
Q  174 tactacccccgtccctaattataagaccctttt 206  Q
    ||||||| |||||||||||||||||||||||||    
T  21265220 tactacctccgtccctaattataagaccctttt 21265252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 23777839 - 23777803
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaag 210  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  23777839 tactacctccgttcctaattataagacccttttgaag 23777803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Original strand, 30523764 - 30523796
Alignment:
Q  174 tactacccccgtccctaattataagaccctttt 206  Q
    ||||||| |||||||||||||||||||||||||    
T  30523764 tactacctccgtccctaattataagaccctttt 30523796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 31937375 - 31937339
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttgaa 209  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  31937375 gtactacctccgtccctaattataaggcccttttgaa 31937339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 37780251 - 37780215
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttgaa 209  Q
    |||||||| ||||||||| ||||||||||||||||||    
T  37780251 gtactacctccgtccctagttataagacccttttgaa 37780215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 39114925 - 39114889
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttgaa 209  Q
    |||||||| |||||||||||||||||| |||||||||    
T  39114925 gtactacctccgtccctaattataagatccttttgaa 39114889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 21631144 - 21631081
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaagnnnnnnnttgtccctttttataagacc 237  Q
    ||||||| |||||||||||||||||||||||||||||       ||||||||||||||||||||    
T  21631144 tactacctccgtccctaattataagacccttttgaagaaacaaattgtccctttttataagacc 21631081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 39283719 - 39283785
Alignment:
Q  9 attacctattcaaaaatcaaaatttatatttttaaaataaatcttctatttatagattctttaacca 75  Q
    ||||| || ||||||||||||| |||||||||||| |||||| |||||||||||| ||| |||||||    
T  39283719 attacttaatcaaaaatcaaaacttatatttttaagataaattttctatttatagtttcattaacca 39283785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 9413362 - 9413299
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaagnnnnnnnttgtccctttttataagacc 237  Q
    ||||||| ||||||||||||||||||||||||||||        ||||||||||||||||||||    
T  9413362 tactacctccgtccctaattataagacccttttgaaaaaaaaaattgtccctttttataagacc 9413299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 72
Target Start/End: Complemental strand, 18910445 - 18910404
Alignment:
Q  31 tttatatttttaaaataaatcttctatttatagattctttaa 72  Q
    |||||||||||||||||||  |||||||||||||||||||||    
T  18910445 tttatatttttaaaataaaatttctatttatagattctttaa 18910404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 41317592 - 41317629
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttgaag 210  Q
    |||||||| |||||||||||||||||||||||||||||    
T  41317592 gtactacctccgtccctaattataagacccttttgaag 41317629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 4280163 - 4280102
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaagnnnnnnnttgtccctttttataaga 235  Q
    ||||||| ||||||||||||||||||||||||||||        ||||||||||||||||||    
T  4280163 tactacctccgtccctaattataagacccttttgaaaaaataatttgtccctttttataaga 4280102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 209
Target Start/End: Original strand, 17483733 - 17483768
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaa 209  Q
    ||||||| ||||||||||||||||||||||||||||    
T  17483733 tactacctccgtccctaattataagacccttttgaa 17483768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 208
Target Start/End: Original strand, 25227303 - 25227338
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttga 208  Q
    |||||||| |||||||||||||||||||||||||||    
T  25227303 gtactacctccgtccctaattataagacccttttga 25227338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 209
Target Start/End: Complemental strand, 27037567 - 27037532
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaa 209  Q
    ||||||| ||||||||||||||||||||||||||||    
T  27037567 tactacctccgtccctaattataagacccttttgaa 27037532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 209
Target Start/End: Original strand, 28885842 - 28885877
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaa 209  Q
    ||||||| ||||||||||||||||||||||||||||    
T  28885842 tactacctccgtccctaattataagacccttttgaa 28885877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 29437892 - 29437828
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttgaagnnnnnnnttgtccctttttataagacc 237  Q
    |||||||| ||||||||||||||||||| ||||||||        ||||||||||||||||||||    
T  29437892 gtactacctccgtccctaattataagactcttttgaaaaaataatttgtccctttttataagacc 29437828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 209
Target Start/End: Complemental strand, 38613773 - 38613738
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaa 209  Q
    ||||||| ||||||||||||||||||||||||||||    
T  38613773 tactacctccgtccctaattataagacccttttgaa 38613738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 7763786 - 7763752
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  7763786 tactacctccgtccctaattataagacccttttga 7763752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Original strand, 25509209 - 25509243
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  25509209 tactacctccgtccctaattataagacccttttga 25509243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Original strand, 27037269 - 27037303
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  27037269 tactacctccgtccctaattataagacccttttga 27037303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 31160775 - 31160841
Alignment:
Q  9 attacctattcaaaaatcaaaatttatatttttaaaataaatcttctatttatagattctttaacca 75  Q
    ||||| || |||||| ||||||||||||||||||| | |||| |||||||||||  ||| |||||||    
T  31160775 attacttaatcaaaagtcaaaatttatatttttaagacaaattttctatttatattttccttaacca 31160841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 42276198 - 42276164
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  42276198 tactacctccgtccctaattataagacccttttga 42276164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 43456658 - 43456624
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  43456658 tactacctccgtccctaattataagacccttttga 43456624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 207
Target Start/End: Complemental strand, 5766027 - 5765994
Alignment:
Q  174 tactacccccgtccctaattataagacccttttg 207  Q
    ||||||| ||||||||||||||||||||||||||    
T  5766027 tactacctccgtccctaattataagacccttttg 5765994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 6090032 - 6089996
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttgaa 209  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  6090032 gtactacctccgtccctaattataggacccttttgaa 6089996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 209
Target Start/End: Complemental strand, 15892605 - 15892565
Alignment:
Q  169 caaggtactacccccgtccctaattataagacccttttgaa 209  Q
    |||| ||||||| |||| |||||||||||||||||||||||    
T  15892605 caagttactacctccgttcctaattataagacccttttgaa 15892565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 23530844 - 23530808
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttgaa 209  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  23530844 gtactacctccgtccctaattataaggcccttttgaa 23530808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 210
Target Start/End: Complemental strand, 28886141 - 28886105
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaag 210  Q
    ||||||| |||||||||||||||||||| ||||||||    
T  28886141 tactacctccgtccctaattataagaccattttgaag 28886105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 28888161 - 28888197
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttgaa 209  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  28888161 gtactacctccgtccctaattataaggcccttttgaa 28888197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000001; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 30857938 - 30858000
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaagnnnnnnnttgtccctttttataagac 236  Q
    ||||||||||||||||||||||||||||||||||||        |||||||||||||||||||    
T  30857938 tactacccccgtccctaattataagacccttttgaaaaaataatttgtccctttttataagac 30858000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 3095299 - 3095362
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaagnnnnnnnttgtccctttttataagacc 237  Q
    ||||||| ||||||||||||||||||||||||||||        ||||||||||||||||||||    
T  3095299 tactacctccgtccctaattataagacccttttgaaaaaataatttgtccctttttataagacc 3095362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 12890245 - 12890182
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaagnnnnnnnttgtccctttttataagacc 237  Q
    ||||||| ||||||||||||||||||||||||||||        ||||||||||||||||||||    
T  12890245 tactacctccgtccctaattataagacccttttgaaaaaaaaatttgtccctttttataagacc 12890182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 208
Target Start/End: Original strand, 2060315 - 2060350
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttga 208  Q
    |||||||| |||||||||||||||||||||||||||    
T  2060315 gtactacctccgtccctaattataagacccttttga 2060350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 209
Target Start/End: Complemental strand, 2200277 - 2200242
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaa 209  Q
    ||||||| ||||||||||||||||||||||||||||    
T  2200277 tactacctccgtccctaattataagacccttttgaa 2200242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 209
Target Start/End: Complemental strand, 18374741 - 18374706
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaa 209  Q
    ||||||| ||||||||||||||||||||||||||||    
T  18374741 tactacctccgtccctaattataagacccttttgaa 18374706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 209
Target Start/End: Complemental strand, 24345715 - 24345680
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaa 209  Q
    ||||||| ||||||||||||||||||||||||||||    
T  24345715 tactacctccgtccctaattataagacccttttgaa 24345680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 208
Target Start/End: Original strand, 28566150 - 28566185
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttga 208  Q
    |||||||| |||||||||||||||||||||||||||    
T  28566150 gtactacctccgtccctaattataagacccttttga 28566185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 36750922 - 36750858
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttgaagnnnnnnnttgtccctttttataagacc 237  Q
    |||||||  ||||||||||||||||||||||||||||        ||||||||||||||||||||    
T  36750922 gtactacttccgtccctaattataagacccttttgaaaaaataatttgtccctttttataagacc 36750858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 209
Target Start/End: Original strand, 41422512 - 41422547
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaa 209  Q
    ||||||| ||||||||||||||||||||||||||||    
T  41422512 tactacctccgtccctaattataagacccttttgaa 41422547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 209
Target Start/End: Complemental strand, 41494659 - 41494624
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaa 209  Q
    ||||||| ||||||||||||||||||||||||||||    
T  41494659 tactacctccgtccctaattataagacccttttgaa 41494624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 7116336 - 7116302
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  7116336 tactacctccgtccctaattataagacccttttga 7116302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 8912911 - 8912877
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  8912911 tactacctccgtccctaattataagacccttttga 8912877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 26322330 - 26322296
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  26322330 tactacctccgtccctaattataagacccttttga 26322296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 207
Target Start/End: Original strand, 5070309 - 5070342
Alignment:
Q  174 tactacccccgtccctaattataagacccttttg 207  Q
    |||||||| |||||||||||||||||||||||||    
T  5070309 tactaccctcgtccctaattataagacccttttg 5070342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 207
Target Start/End: Original strand, 10757774 - 10757807
Alignment:
Q  174 tactacccccgtccctaattataagacccttttg 207  Q
    |||| |||||||||||||||||||||||||||||    
T  10757774 tactccccccgtccctaattataagacccttttg 10757807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 207
Target Start/End: Original strand, 31751069 - 31751102
Alignment:
Q  174 tactacccccgtccctaattataagacccttttg 207  Q
    ||||||| ||||||||||||||||||||||||||    
T  31751069 tactacctccgtccctaattataagacccttttg 31751102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Original strand, 2199978 - 2200010
Alignment:
Q  174 tactacccccgtccctaattataagaccctttt 206  Q
    ||||||| |||||||||||||||||||||||||    
T  2199978 tactacctccgtccctaattataagaccctttt 2200010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 12889948 - 12889984
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttgaa 209  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  12889948 gtactacctccgtccctaattataggacccttttgaa 12889984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Complemental strand, 13215857 - 13215825
Alignment:
Q  174 tactacccccgtccctaattataagaccctttt 206  Q
    ||||||| |||||||||||||||||||||||||    
T  13215857 tactacctccgtccctaattataagaccctttt 13215825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Original strand, 23083515 - 23083547
Alignment:
Q  174 tactacccccgtccctaattataagaccctttt 206  Q
    ||||||| |||||||||||||||||||||||||    
T  23083515 tactacctccgtccctaattataagaccctttt 23083547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 20 - 76
Target Start/End: Complemental strand, 23788459 - 23788403
Alignment:
Q  20 aaaaatcaaaatttatatttttaaaataaatcttctatttatagattctttaaccag 76  Q
    |||||| | |||||||||||| |||||| |  ||||||||||||||| |||||||||    
T  23788459 aaaaatgataatttatattttcaaaatataaattctatttatagattttttaaccag 23788403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 32083097 - 32083145
Alignment:
Q  27 aaaatttatatttttaaaataaatcttctatttatagattctttaacca 75  Q
    |||||||||||||||||||||||  || |||| ||||||| ||||||||    
T  32083097 aaaatttatatttttaaaataaaatttttattgatagattttttaacca 32083145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000005; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 72
Target Start/End: Complemental strand, 35349447 - 35349395
Alignment:
Q  20 aaaaatcaaaatttatatttttaaaataaatcttctatttatagattctttaa 72  Q
    ||||| ||||| ||||||||| ||||||||| |||||||||||||||||||||    
T  35349447 aaaaaccaaaacttatattttcaaaataaattttctatttatagattctttaa 35349395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 7940452 - 7940515
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaagnnnnnnnttgtccctttttataagacc 237  Q
    ||||||| ||||||||||||||||||||||||||||        ||||||||||||||||||||    
T  7940452 tactacctccgtccctaattataagacccttttgaaaaaaaaaattgtccctttttataagacc 7940515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 4976328 - 4976292
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttgaa 209  Q
    |||||||| ||||||||||||||||||||||||||||    
T  4976328 gtactacctccgtccctaattataagacccttttgaa 4976292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 210
Target Start/End: Original strand, 14435830 - 14435866
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaag 210  Q
    ||||||| |||||||||||||||||||||||||||||    
T  14435830 tactacctccgtccctaattataagacccttttgaag 14435866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Original strand, 3028013 - 3028047
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  3028013 tactacctccgtccctaattataagacccttttga 3028047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 6102877 - 6102943
Alignment:
Q  9 attacctattcaaaaatcaaaatttatatttttaaaataaatcttctatttatagattctttaacca 75  Q
    ||||| || |||||| |||||| ||||||||| || | |||| |||||||||||||||| |||||||    
T  6102877 attacttaatcaaaagtcaaaacttatattttgaagacaaattttctatttatagattccttaacca 6102943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Original strand, 8949812 - 8949846
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  8949812 tactacctccgtccctaattataagacccttttga 8949846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 19571976 - 19571942
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  19571976 tactacctccgtccctaattataagacccttttga 19571942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 20142296 - 20142233
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaagnnnnnnnttgtccctttttataagacc 237  Q
    ||||||| |||||||||||||||||||||||||| |        ||||||||||||||||||||    
T  20142296 tactacctccgtccctaattataagacccttttggaaaaaaaaattgtccctttttataagacc 20142233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 23260175 - 23260141
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  23260175 tactacctccgtccctaattataagacccttttga 23260141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 23286511 - 23286477
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  23286511 tactacctccgtccctaattataagacccttttga 23286477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 43060448 - 43060414
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  43060448 tactacctccgtccctaattataagacccttttga 43060414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 161 - 210
Target Start/End: Complemental strand, 14570940 - 14570891
Alignment:
Q  161 tatggttgcaaggtactacccccgtccctaattataagacccttttgaag 210  Q
    |||||||  ||| ||||||| |||||||||||||||||||| ||||||||    
T  14570940 tatggtttaaagttactacctccgtccctaattataagacctttttgaag 14570891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 8283850 - 8283886
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttgaa 209  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  8283850 gtactacctccgtccctaattataaggcccttttgaa 8283886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 9268031 - 9268067
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttgaa 209  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  9268031 gtactacctccgtccctaattataaggcccttttgaa 9268067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 19571668 - 19571704
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttgaa 209  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  19571668 gtactacctccgtccctaattataaggcccttttgaa 19571704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 35547560 - 35547524
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttgaa 209  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  35547560 gtactacctccgtccctaattataaggcccttttgaa 35547524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000005; HSPs: 27)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 174 - 235
Target Start/End: Complemental strand, 32969262 - 32969201
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaagnnnnnnnttgtccctttttataaga 235  Q
    ||||||||||||||||||||||||||||||||||||        ||||||||||||||||||    
T  32969262 tactacccccgtccctaattataagacccttttgaaaaaataatttgtccctttttataaga 32969201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 15996811 - 15996747
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttgaagnnnnnnnttgtccctttttataagacc 237  Q
    |||||||| ||||||||||||||||||||||||||||        ||||||||||||||||||||    
T  15996811 gtactacctccgtccctaattataagacccttttgaaaaaaaaatttgtccctttttataagacc 15996747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 9 - 72
Target Start/End: Complemental strand, 41287947 - 41287884
Alignment:
Q  9 attacctattcaaaaatcaaaatttatatttttaaaataaatcttctatttatagattctttaa 72  Q
    ||||| || ||||||||||||| |||||||||||||| |||| |||||||||||| ||| ||||    
T  41287947 attacttaatcaaaaatcaaaacttatatttttaaaacaaattttctatttatagtttccttaa 41287884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 10015826 - 10015763
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaagnnnnnnnttgtccctttttataagacc 237  Q
    ||||||| ||||||||||||||||||||||||||||        ||||||||||||||||||||    
T  10015826 tactacctccgtccctaattataagacccttttgaaaaaaaaaattgtccctttttataagacc 10015763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 236
Target Start/End: Complemental strand, 19897873 - 19897811
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaagnnnnnnnttgtccctttttataagac 236  Q
    ||||||| ||||||||||||||||||||||||||||        |||||||||||||||||||    
T  19897873 tactacctccgtccctaattataagacccttttgaaaaaaaaaattgtccctttttataagac 19897811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 4759087 - 4759123
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttgaa 209  Q
    |||||||| ||||||||||||||||||||||||||||    
T  4759087 gtactacctccgtccctaattataagacccttttgaa 4759123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 45513675 - 45513639
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttgaa 209  Q
    |||||||| ||||||||||||||||||||||||||||    
T  45513675 gtactacctccgtccctaattataagacccttttgaa 45513639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 205
Target Start/End: Complemental strand, 18658460 - 18658429
Alignment:
Q  174 tactacccccgtccctaattataagacccttt 205  Q
    ||||||||||||||||||||||||||||||||    
T  18658460 tactacccccgtccctaattataagacccttt 18658429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 209
Target Start/End: Complemental strand, 28875288 - 28875253
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaa 209  Q
    ||||||| ||||||||||||||||||||||||||||    
T  28875288 tactacctccgtccctaattataagacccttttgaa 28875253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 209
Target Start/End: Original strand, 42801521 - 42801556
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaa 209  Q
    ||||||| ||||||||||||||||||||||||||||    
T  42801521 tactacctccgtccctaattataagacccttttgaa 42801556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 4759388 - 4759354
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  4759388 tactacctccgtccctaattataagacccttttga 4759354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Original strand, 8321925 - 8321959
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  8321925 tactacctccgtccctaattataagacccttttga 8321959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 24087372 - 24087338
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  24087372 tactacctccgtccctaattataagacccttttga 24087338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 41392917 - 41392883
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  41392917 tactacctccgtccctaattataagacccttttga 41392883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 46845529 - 46845495
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  46845529 tactacctccgtccctaattataagacccttttga 46845495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 34228313 - 34228256
Alignment:
Q  18 tcaaaaatcaaaatttatatttttaaaataaatcttctatttatagattctttaacca 75  Q
    |||||| ||||||||||||||||||| | |||| || ||||||||| ||| |||||||    
T  34228313 tcaaaagtcaaaatttatatttttaagacaaattttttatttatagtttccttaacca 34228256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 48252326 - 48252269
Alignment:
Q  18 tcaaaaatcaaaatttatatttttaaaataaatcttctatttatagattctttaacca 75  Q
    |||||| |||||| ||||||||| || |||||| || ||||||||||||| |||||||    
T  48252326 tcaaaagtcaaaacttatattttcaagataaattttttatttatagattccttaacca 48252269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 236
Target Start/End: Complemental strand, 48904300 - 48904238
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaagnnnnnnnttgtccctttttataagac 236  Q
    ||||||| ||||||||||||||||||||||||| ||        |||||||||||||||||||    
T  48904300 tactacctccgtccctaattataagacccttttaaaaaaataatttgtccctttttataagac 48904238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Complemental strand, 12906450 - 12906418
Alignment:
Q  174 tactacccccgtccctaattataagaccctttt 206  Q
    ||||||| |||||||||||||||||||||||||    
T  12906450 tactacctccgtccctaattataagaccctttt 12906418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 20918221 - 20918253
Alignment:
Q  176 ctacccccgtccctaattataagacccttttga 208  Q
    ||||| |||||||||||||||||||||||||||    
T  20918221 ctacctccgtccctaattataagacccttttga 20918253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 20927183 - 20927215
Alignment:
Q  176 ctacccccgtccctaattataagacccttttga 208  Q
    ||||| |||||||||||||||||||||||||||    
T  20927183 ctacctccgtccctaattataagacccttttga 20927215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 28673034 - 28673070
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttgaa 209  Q
    |||||||| |||||||||||||||| |||||||||||    
T  28673034 gtactacctccgtccctaattataaaacccttttgaa 28673070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 75
Target Start/End: Complemental strand, 28709608 - 28709564
Alignment:
Q  31 tttatatttttaaaataaatcttctatttatagattctttaacca 75  Q
    |||||||||| || |||||  ||||||||||||||||||||||||    
T  28709608 tttatattttcaagataaaatttctatttatagattctttaacca 28709564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 172 - 208
Target Start/End: Complemental strand, 29719749 - 29719713
Alignment:
Q  172 ggtactacccccgtccctaattataagacccttttga 208  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  29719749 ggtactacctccgtccataattataagacccttttga 29719713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 46845230 - 46845266
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttgaa 209  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  46845230 gtactacctccgtccctaattataaggcccttttgaa 46845266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 49383343 - 49383379
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttgaa 209  Q
    |||||||| ||||||||||||||||||| ||||||||    
T  49383343 gtactacctccgtccctaattataagactcttttgaa 49383379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 50433127 - 50433163
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttgaa 209  Q
    |||||||| ||||||||||||||||| ||||||||||    
T  50433127 gtactacctccgtccctaattataaggcccttttgaa 50433163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 75
Target Start/End: Original strand, 12947 - 12994
Alignment:
Q  28 aaatttatatttttaaaataaatcttctatttatagattctttaacca 75  Q
    ||||||||||||||||||||| | |||||||||||| |||||||||||    
T  12947 aaatttatatttttaaaataatttttctatttatagtttctttaacca 12994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 75
Target Start/End: Complemental strand, 18080 - 18014
Alignment:
Q  9 attacctattcaaaaatcaaaatttatatttttaaaataaatcttctatttatagattctttaacca 75  Q
    ||||| || |||||| |||||| |||||||||||| |||||| |||||||||||| ||| |||||||    
T  18080 attacttaatcaaaagtcaaaacttatatttttaagataaattttctatttatagtttccttaacca 18014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 164214 - 164277
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaagnnnnnnnttgtccctttttataagacc 237  Q
    ||||||| ||||||||||||||||||||||||||||        ||||||||||||||||||||    
T  164214 tactacctccgtccctaattataagacccttttgaaaaaaaaaattgtccctttttataagacc 164277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 35; Significance: 0.00000000008; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 23487064 - 23487127
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaagnnnnnnnttgtccctttttataagacc 237  Q
    ||||||| ||||||||||||||||||||||||||||        ||||||||||||||||||||    
T  23487064 tactacctccgtccctaattataagacccttttgaaaaaaaaaattgtccctttttataagacc 23487127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 44888680 - 44888742
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaagnnnnnnnttgtccctttttataagac 236  Q
    ||||||| ||||||||||||||||||||||||||||        |||||||||||||||||||    
T  44888680 tactacctccgtccctaattataagacccttttgaaaaaaaaaattgtccctttttataagac 44888742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 12958924 - 12958987
Alignment:
Q  9 attacctattcaaaaatcaaaatttatatttttaaaataaatcttctatttatagattctttaa 72  Q
    ||||| || |||||||| |||| ||||||||| || | |||| |||||||||||||||||||||    
T  12958924 attacttaatcaaaaataaaaacttatattttgaagacaaattttctatttatagattctttaa 12958987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 208
Target Start/End: Complemental strand, 17069882 - 17069847
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttga 208  Q
    |||||||| |||||||||||||||||||||||||||    
T  17069882 gtactacctccgtccctaattataagacccttttga 17069847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 208
Target Start/End: Original strand, 17578391 - 17578426
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttga 208  Q
    |||||||| |||||||||||||||||||||||||||    
T  17578391 gtactacctccgtccctaattataagacccttttga 17578426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 209
Target Start/End: Complemental strand, 23688202 - 23688167
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaa 209  Q
    ||||||| ||||||||||||||||||||||||||||    
T  23688202 tactacctccgtccctaattataagacccttttgaa 23688167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 2152277 - 2152243
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  2152277 tactacctccgtccctaattataagacccttttga 2152243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Original strand, 5162304 - 5162338
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  5162304 tactacctccgtccctaattataagacccttttga 5162338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 6050592 - 6050558
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  6050592 tactacctccgtccctaattataagacccttttga 6050558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Original strand, 12802611 - 12802645
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  12802611 tactacctccgtccctaattataagacccttttga 12802645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 18112012 - 18111949
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaagnnnnnnnttgtccctttttataagacc 237  Q
    ||||||| |||||||||||||||||||||||||| |        ||||||||||||||||||||    
T  18112012 tactacctccgtccctaattataagacccttttggaaaaaaaaattgtccctttttataagacc 18111949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 18641417 - 18641383
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  18641417 tactacctccgtccctaattataagacccttttga 18641383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 75
Target Start/End: Original strand, 40607347 - 40607413
Alignment:
Q  9 attacctattcaaaaatcaaaatttatatttttaaaataaatcttctatttatagattctttaacca 75  Q
    ||||| || |||||| |||||| |||||||||||| |||||| ||||||||||| |||  |||||||    
T  40607347 attacttaatcaaaagtcaaaacttatatttttaagataaattttctatttataaatttcttaacca 40607413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 207
Target Start/End: Complemental strand, 45283829 - 45283796
Alignment:
Q  174 tactacccccgtccctaattataagacccttttg 207  Q
    ||||||| ||||||||||||||||||||||||||    
T  45283829 tactacctccgtccctaattataagacccttttg 45283796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 23687904 - 23687940
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttgaa 209  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  23687904 gtactacctccgtccctaattataggacccttttgaa 23687940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 32522583 - 32522619
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttgaa 209  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  32522583 gtactacctccgtccctaattataggacccttttgaa 32522619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 40785189 - 40785153
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttgaa 209  Q
    |||| ||| ||||||||||||||||||||||||||||    
T  40785189 gtaccacctccgtccctaattataagacccttttgaa 40785153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Original strand, 44580616 - 44580648
Alignment:
Q  174 tactacccccgtccctaattataagaccctttt 206  Q
    ||||||| |||||||||||||||||||||||||    
T  44580616 tactacctccgtccctaattataagaccctttt 44580648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 35; Significance: 0.00000000008; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 170 - 237
Target Start/End: Original strand, 9038638 - 9038705
Alignment:
Q  170 aaggtactacccccgtccctaattataagacccttttgaagnnnnnnnttgtccctttttataagacc 237  Q
    |||||||| || ||||||||||||||||||||||||||||        ||||||||||||||||||||    
T  9038638 aaggtactccctccgtccctaattataagacccttttgaaaaaatcatttgtccctttttataagacc 9038705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 13321363 - 13321300
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaagnnnnnnnttgtccctttttataagacc 237  Q
    ||||||| ||||||||||||||||||||||||||||        ||||||||||||||||||||    
T  13321363 tactacctccgtccctaattataagacccttttgaaaaaataatttgtccctttttataagacc 13321300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 31091445 - 31091508
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaagnnnnnnnttgtccctttttataagacc 237  Q
    ||||||| ||||||||||||||||||||||||||||        ||||||||||||||||||||    
T  31091445 tactacctccgtccctaattataagacccttttgaaaaaaaaaattgtccctttttataagacc 31091508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 6770892 - 6770949
Alignment:
Q  18 tcaaaaatcaaaatttatatttttaaaataaatcttctatttatagattctttaacca 75  Q
    |||||| |||||||||||||||| || |||||| |||||||||||| ||| |||||||    
T  6770892 tcaaaagtcaaaatttatattttcaagataaattttctatttatagtttccttaacca 6770949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 32800263 - 32800320
Alignment:
Q  18 tcaaaaatcaaaatttatatttttaaaataaatcttctatttatagattctttaacca 75  Q
    ||||||||||||| |||||||||||| | |||| |||||||||||| ||| |||||||    
T  32800263 tcaaaaatcaaaacttatatttttaagacaaattttctatttatagtttccttaacca 32800320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 72
Target Start/End: Original strand, 2398057 - 2398120
Alignment:
Q  9 attacctattcaaaaatcaaaatttatatttttaaaataaatcttctatttatagattctttaa 72  Q
    ||||| || |||||| |||||| ||||||||| || |||||| |||||||||||||||| ||||    
T  2398057 attacttaatcaaaagtcaaaacttatattttcaagataaattttctatttatagattccttaa 2398120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 209
Target Start/End: Complemental strand, 16122551 - 16122516
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaa 209  Q
    ||||||| ||||||||||||||||||||||||||||    
T  16122551 tactacctccgtccctaattataagacccttttgaa 16122516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 402658 - 402624
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  402658 tactacctccgtccctaattataagacccttttga 402624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Original strand, 2090658 - 2090692
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  2090658 tactacctccgtccctaattataagacccttttga 2090692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 207
Target Start/End: Original strand, 13866592 - 13866626
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttg 207  Q
    |||||||| ||||||||||||||||||||||||||    
T  13866592 gtactacctccgtccctaattataagacccttttg 13866626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Original strand, 13901641 - 13901675
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  13901641 tactacctccgtccctaattataagacccttttga 13901675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Original strand, 15498629 - 15498663
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  15498629 tactacctccgtccctaattataagacccttttga 15498663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Original strand, 23604460 - 23604494
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  23604460 tactacctccgtccctaattataagacccttttga 23604494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 25045680 - 25045646
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  25045680 tactacctccgtccctaattataagacccttttga 25045646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 34915580 - 34915546
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  34915580 tactacctccgtccctaattataagacccttttga 34915546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 210
Target Start/End: Complemental strand, 16272997 - 16272969
Alignment:
Q  182 ccgtccctaattataagacccttttgaag 210  Q
    |||||||||||||||||||||||||||||    
T  16272997 ccgtccctaattataagacccttttgaag 16272969  T

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Target: chr7 (Bit Score: 34; Significance: 0.0000000003; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 173 - 210
Target Start/End: Original strand, 31581676 - 31581713
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttgaag 210  Q
    |||||||| |||||||||||||||||||||||||||||    
T  31581676 gtactacctccgtccctaattataagacccttttgaag 31581713  T

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Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 32118201 - 32118165
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttgaa 209  Q
    |||||||| ||||||||||||||||||||||||||||    
T  32118201 gtactacctccgtccctaattataagacccttttgaa 32118165  T

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Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 209
Target Start/End: Original strand, 20950779 - 20950814
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaa 209  Q
    ||||||||||||||||||||||| ||||||||||||    
T  20950779 tactacccccgtccctaattataggacccttttgaa 20950814  T

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Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 75
Target Start/End: Original strand, 24937891 - 24937946
Alignment:
Q  20 aaaaatcaaaatttatatttttaaaataaatcttctatttatagattctttaacca 75  Q
    |||| ||||||| ||||||||||||| |||| |||||||||||| ||| |||||||    
T  24937891 aaaagtcaaaatctatatttttaaaacaaattttctatttatagtttccttaacca 24937946  T

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Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 209
Target Start/End: Original strand, 27813496 - 27813531
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaa 209  Q
    ||||||| ||||||||||||||||||||||||||||    
T  27813496 tactacctccgtccctaattataagacccttttgaa 27813531  T

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Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 173 - 237
Target Start/End: Complemental strand, 49045158 - 49045094
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttgaagnnnnnnnttgtccctttttataagacc 237  Q
    |||||||| ||||| ||||||||||||||||||||||        ||||||||||||||||||||    
T  49045158 gtactacctccgtctctaattataagacccttttgaaaaaataatttgtccctttttataagacc 49045094  T

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Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 2290053 - 2290019
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  2290053 tactacctccgtccctaattataagacccttttga 2290019  T

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Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 33381610 - 33381576
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  33381610 tactacctccgtccctaattataagacccttttga 33381576  T

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Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 34012554 - 34012520
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  34012554 tactacctccgtccctaattataagacccttttga 34012520  T

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Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 208
Target Start/End: Complemental strand, 41252402 - 41252364
Alignment:
Q  170 aaggtactacccccgtccctaattataagacccttttga 208  Q
    |||||||| || |||||||||||||||||||||||||||    
T  41252402 aaggtactccctccgtccctaattataagacccttttga 41252364  T

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Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 22555763 - 22555820
Alignment:
Q  18 tcaaaaatcaaaatttatatttttaaaataaatcttctatttatagattctttaacca 75  Q
    ||||||||||||| ||||||||| || |||||  ||||||||||  ||||||||||||    
T  22555763 tcaaaaatcaaaacttatattttaaagataaaatttctatttatgaattctttaacca 22555820  T

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Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 39386963 - 39387020
Alignment:
Q  18 tcaaaaatcaaaatttatatttttaaaataaatcttctatttatagattctttaacca 75  Q
    |||||| | ||||||||||||||||  |||||| || ||||||||| |||||||||||    
T  39386963 tcaaaagttaaaatttatatttttaggataaattttttatttatagtttctttaacca 39387020  T

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Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Original strand, 1574719 - 1574751
Alignment:
Q  174 tactacccccgtccctaattataagaccctttt 206  Q
    ||||||| |||||||||||||||||||||||||    
T  1574719 tactacctccgtccctaattataagaccctttt 1574751  T

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Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 72
Target Start/End: Complemental strand, 4037883 - 4037843
Alignment:
Q  32 ttatatttttaaaataaatcttctatttatagattctttaa 72  Q
    |||||||||||||| ||| |||||||||||| |||||||||    
T  4037883 ttatatttttaaaacaaaacttctatttatatattctttaa 4037843  T

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Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 26736785 - 26736749
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttgaa 209  Q
    |||||||| || |||||||||||||||||||||||||    
T  26736785 gtactacctccatccctaattataagacccttttgaa 26736749  T

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Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Original strand, 27529228 - 27529264
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttgaa 209  Q
    |||||||| |||||||||||||||||| |||||||||    
T  27529228 gtactacctccgtccctaattataagatccttttgaa 27529264  T

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Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 35569689 - 35569653
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttgaa 209  Q
    |||||||| |||||| |||||||||||||||||||||    
T  35569689 gtactacctccgtccttaattataagacccttttgaa 35569653  T

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Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 41444501 - 41444465
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttgaa 209  Q
    |||||||| |||||||||||||||||| |||||||||    
T  41444501 gtactacctccgtccctaattataagatccttttgaa 41444465  T

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Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 206
Target Start/End: Complemental strand, 42541896 - 42541864
Alignment:
Q  174 tactacccccgtccctaattataagaccctttt 206  Q
    ||||||| |||||||||||||||||||||||||    
T  42541896 tactacctccgtccctaattataagaccctttt 42541864  T

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Target: scaffold0240 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 209
Target Start/End: Complemental strand, 18794 - 18758
Alignment:
Q  173 gtactacccccgtccctaattataagacccttttgaa 209  Q
    |||||||| ||||||||||||||||||||||||||||    
T  18794 gtactacctccgtccctaattataagacccttttgaa 18758  T

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Target: scaffold0240; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Original strand, 18497 - 18531
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  18497 tactacctccgtccctaattataagacccttttga 18531  T

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Target: scaffold0163 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 209
Target Start/End: Complemental strand, 1483 - 1448
Alignment:
Q  174 tactacccccgtccctaattataagacccttttgaa 209  Q
    ||||||| ||||||||||||||||||||||||||||    
T  1483 tactacctccgtccctaattataagacccttttgaa 1448  T

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Target: scaffold0674 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Original strand, 5151 - 5185
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  5151 tactacctccgtccctaattataagacccttttga 5185  T

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Target: scaffold0549 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0549
Description:

Target: scaffold0549; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Complemental strand, 10219 - 10185
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  10219 tactacctccgtccctaattataagacccttttga 10185  T

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Target: scaffold0161 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Original strand, 3438 - 3472
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  3438 tactacctccgtccctaattataagacccttttga 3472  T

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Target: scaffold0107 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 208
Target Start/End: Original strand, 48654 - 48688
Alignment:
Q  174 tactacccccgtccctaattataagacccttttga 208  Q
    ||||||| |||||||||||||||||||||||||||    
T  48654 tactacctccgtccctaattataagacccttttga 48688  T

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Target: scaffold0237 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 207
Target Start/End: Complemental strand, 6646 - 6613
Alignment:
Q  174 tactacccccgtccctaattataagacccttttg 207  Q
    ||||||| ||||||||||||||||||||||||||    
T  6646 tactacctccgtccctaattataagacccttttg 6613  T

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