View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5186_high_11 (Length: 249)
Name: NF5186_high_11
Description: NF5186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5186_high_11 |
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Alignment Details
Target: chr6 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 31824790 - 31824554
Alignment:
| Q |
1 |
ggatggtcttgtggctgcagcggatttgggtggtagtgttcttaccggtgttaatgggaatccacttggtgttcttgctagacagttagatttgccgctt |
100 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31824790 |
ggatggtcttgtggctgcggcggatttgggtggtagtgttcttaccggtgttaatgggaatccacttggtgttcttgctagacagttagatttgccgctt |
31824691 |
T |
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| Q |
101 |
cacaaggttagggatatttgtccactttatatgccggatggaaaatgtgttgattctgaggttgattctagggttgaggttttgtttaataagttgttag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31824690 |
cacaaggttagggatatttgtccactttatatgccggatggaaaatgtgttgattctgaggttgattctagggttgaggttttgtttaataagttgttag |
31824591 |
T |
|
| Q |
201 |
agagggtttgtaagcttaggcaagctatgattgatga |
237 |
Q |
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||||||| ||||||||||||||||||||||||||||| |
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| T |
31824590 |
agagggtatgtaagcttaggcaagctatgattgatga |
31824554 |
T |
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