View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5186_high_4 (Length: 448)

Name: NF5186_high_4
Description: NF5186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5186_high_4
NF5186_high_4
[»] chr4 (63 HSPs)
chr4 (1-423)||(37992270-37992694)
chr4 (114-366)||(2586409-2586663)
chr4 (117-398)||(31945988-31946268)
chr4 (44-398)||(40694070-40694427)
chr4 (117-308)||(36943745-36943936)
chr4 (175-378)||(51858927-51859132)
chr4 (172-397)||(1177106-1177334)
chr4 (117-308)||(46431784-46431975)
chr4 (118-301)||(24793589-24793772)
chr4 (44-359)||(36511733-36512052)
chr4 (52-308)||(17892256-17892515)
chr4 (112-301)||(42630342-42630532)
chr4 (112-308)||(3109156-3109352)
chr4 (181-306)||(49470419-49470545)
chr4 (190-308)||(44521897-44522017)
chr4 (293-398)||(44521785-44521892)
chr4 (293-398)||(55900887-55900994)
chr4 (172-308)||(754299-754437)
chr4 (177-398)||(51674923-51675145)
chr4 (41-160)||(53322334-53322456)
chr4 (320-388)||(3109054-3109122)
chr4 (306-378)||(24793490-24793562)
chr4 (320-388)||(36943970-36944038)
chr4 (293-396)||(258832-258938)
chr4 (321-396)||(47607381-47607456)
chr4 (320-398)||(30683421-30683499)
chr4 (257-308)||(24784588-24784639)
chr4 (257-308)||(24823627-24823678)
chr4 (257-308)||(52721570-52721621)
chr4 (306-400)||(39957975-39958069)
chr4 (320-398)||(42630217-42630295)
chr4 (44-160)||(8064108-8064227)
chr4 (45-160)||(19738698-19738816)
chr4 (188-308)||(55900999-55901122)
chr4 (42-160)||(41145610-41145731)
chr4 (42-160)||(52122868-52122989)
chr4 (42-160)||(5834828-5834949)
chr4 (320-398)||(7952872-7952950)
chr4 (320-398)||(14614783-14614861)
chr4 (306-400)||(24784659-24784753)
chr4 (306-400)||(24823513-24823607)
chr4 (306-400)||(52721641-52721735)
chr4 (320-388)||(17892549-17892617)
chr4 (42-105)||(14795021-14795084)
chr4 (42-105)||(28376994-28377057)
chr4 (257-308)||(39957904-39957955)
chr4 (44-160)||(38492268-38492377)
chr4 (43-159)||(3403585-3403694)
chr4 (42-99)||(47607108-47607165)
chr4 (306-398)||(49470563-49470655)
chr4 (117-160)||(21637741-21637784)
chr4 (40-138)||(51674854-51674955)
chr4 (293-347)||(28377282-28377338)
chr4 (271-308)||(41146349-41146385)
chr4 (343-400)||(43509649-43509706)
chr4 (271-308)||(52572934-52572970)
chr4 (172-220)||(726497-726545)
chr4 (344-396)||(3402789-3402841)
chr4 (344-396)||(5325234-5325286)
chr4 (306-350)||(5835230-5835274)
chr4 (42-82)||(10257698-10257738)
chr4 (344-400)||(28377348-28377404)
chr4 (43-99)||(31946268-31946324)
[»] chr5 (60 HSPs)
chr5 (42-398)||(26716271-26716630)
chr5 (42-398)||(26986011-26986370)
chr5 (42-397)||(1795390-1795750)
chr5 (42-301)||(5612300-5612562)
chr5 (45-308)||(17138105-17138370)
chr5 (124-396)||(27938242-27938514)
chr5 (52-308)||(30284456-30284717)
chr5 (117-398)||(3934548-3934830)
chr5 (114-377)||(43357540-43357804)
chr5 (46-398)||(26691618-26691996)
chr5 (46-398)||(26961350-26961728)
chr5 (172-398)||(25749735-25749963)
chr5 (180-308)||(27085486-27085616)
chr5 (44-398)||(7629070-7629403)
chr5 (179-300)||(22737974-22738097)
chr5 (172-305)||(11694332-11694465)
chr5 (180-308)||(41233447-41233573)
chr5 (172-378)||(42365882-42366096)
chr5 (293-398)||(15066463-15066570)
chr5 (291-398)||(21251732-21251841)
chr5 (320-398)||(39796705-39796783)
chr5 (321-400)||(11907593-11907672)
chr5 (172-308)||(18001817-18001954)
chr5 (42-160)||(30777521-30777642)
chr5 (293-398)||(3701336-3701442)
chr5 (320-398)||(5722278-5722356)
chr5 (257-397)||(14836548-14836689)
chr5 (42-160)||(1639781-1639902)
chr5 (303-398)||(6242769-6242864)
chr5 (335-398)||(18001717-18001780)
chr5 (42-160)||(32707830-32707951)
chr5 (306-400)||(30777147-30777241)
chr5 (42-160)||(26795003-26795113)
chr5 (44-160)||(33829753-33829872)
chr5 (188-308)||(5722122-5722244)
chr5 (42-160)||(39690762-39690883)
chr5 (320-398)||(9654029-9654107)
chr5 (320-377)||(1921062-1921119)
chr5 (42-160)||(12852117-12852227)
chr5 (344-400)||(10657296-10657352)
chr5 (42-105)||(10656818-10656881)
chr5 (46-160)||(11906220-11906337)
chr5 (257-308)||(11907507-11907558)
chr5 (42-105)||(30918376-30918439)
chr5 (53-159)||(41392712-41392821)
chr5 (306-376)||(9729397-9729467)
chr5 (320-378)||(17138014-17138071)
chr5 (117-159)||(19321449-19321491)
chr5 (336-398)||(34032667-34032729)
chr5 (344-396)||(9793147-9793199)
chr5 (53-160)||(14836390-14836500)
chr5 (320-396)||(27085650-27085725)
chr5 (257-308)||(30777261-30777312)
chr5 (204-301)||(34032521-34032622)
chr5 (42-108)||(5721986-5722051)
chr5 (344-400)||(5985689-5985745)
chr5 (306-350)||(22738124-22738168)
chr5 (52-108)||(27938171-27938227)
chr5 (344-396)||(30918995-30919047)
chr5 (338-398)||(41233614-41233674)
[»] chr2 (49 HSPs)
chr2 (53-398)||(1005522-1005869)
chr2 (52-378)||(8482698-8483027)
chr2 (42-398)||(14824146-14824496)
chr2 (54-398)||(4561798-4562146)
chr2 (117-308)||(34146256-34146447)
chr2 (52-398)||(44156605-44156954)
chr2 (42-308)||(31236037-31236306)
chr2 (52-301)||(35342325-35342578)
chr2 (45-308)||(3545431-3545698)
chr2 (32-284)||(1776311-1776566)
chr2 (44-398)||(3563851-3564197)
chr2 (42-397)||(28746422-28746772)
chr2 (43-308)||(2319274-2319542)
chr2 (44-397)||(24585530-24585892)
chr2 (172-308)||(10573623-10573761)
chr2 (44-301)||(21104482-21104742)
chr2 (185-395)||(40431786-40431997)
chr2 (44-398)||(4355325-4355669)
chr2 (188-302)||(9293250-9293366)
chr2 (322-398)||(40536498-40536574)
chr2 (181-398)||(5588176-5588395)
chr2 (306-388)||(35342604-35342686)
chr2 (52-282)||(14217027-14217264)
chr2 (320-398)||(31235925-31236003)
chr2 (42-160)||(20536773-20536884)
chr2 (41-160)||(6497648-6497770)
chr2 (42-160)||(7876712-7876833)
chr2 (320-375)||(9293663-9293718)
chr2 (42-160)||(16561798-16561919)
chr2 (42-160)||(38602321-38602442)
chr2 (320-398)||(12206266-12206344)
chr2 (320-398)||(34146481-34146559)
chr2 (306-400)||(45158913-45159007)
chr2 (42-160)||(4170501-4170622)
chr2 (42-160)||(33324816-33324937)
chr2 (42-160)||(40308896-40309017)
chr2 (42-160)||(7807373-7807494)
chr2 (190-281)||(12206171-12206264)
chr2 (324-378)||(35996814-35996868)
chr2 (293-400)||(18301367-18301480)
chr2 (42-99)||(45159361-45159418)
chr2 (42-160)||(18300970-18301091)
chr2 (117-160)||(40497384-40497427)
chr2 (355-398)||(10573818-10573861)
chr2 (320-377)||(2319576-2319632)
chr2 (293-343)||(5371347-5371399)
chr2 (271-308)||(6497010-6497046)
chr2 (296-350)||(20537114-20537170)
chr2 (42-82)||(5588105-5588145)
[»] chr7 (75 HSPs)
chr7 (39-305)||(44959989-44960258)
chr7 (117-400)||(21409464-21409746)
chr7 (172-398)||(23969887-23970115)
chr7 (119-398)||(554651-554930)
chr7 (119-308)||(21179911-21180100)
chr7 (52-398)||(35159870-35160242)
chr7 (178-308)||(23078960-23079092)
chr7 (42-398)||(33454065-33454446)
chr7 (119-308)||(40041454-40041642)
chr7 (53-398)||(24956257-24956601)
chr7 (223-398)||(48153722-48153899)
chr7 (178-301)||(15878282-15878407)
chr7 (306-398)||(44270004-44270096)
chr7 (172-308)||(1400119-1400257)
chr7 (172-308)||(36757867-36758005)
chr7 (172-308)||(36767391-36767529)
chr7 (196-301)||(36763654-36763761)
chr7 (172-277)||(44269851-44269958)
chr7 (320-398)||(38064969-38065046)
chr7 (320-396)||(1400009-1400085)
chr7 (306-398)||(19820737-19820829)
chr7 (326-398)||(40053573-40053645)
chr7 (42-160)||(25969392-25969513)
chr7 (306-388)||(15878173-15878255)
chr7 (304-398)||(44959076-44959170)
chr7 (44-160)||(1043070-1043189)
chr7 (115-299)||(38064736-38064921)
chr7 (257-308)||(11058661-11058712)
chr7 (42-160)||(40095645-40095766)
chr7 (306-400)||(9250048-9250142)
chr7 (306-400)||(9283598-9283692)
chr7 (320-398)||(23078848-23078926)
chr7 (306-400)||(25969791-25969885)
chr7 (118-358)||(26973127-26973371)
chr7 (306-388)||(36413631-36413713)
chr7 (320-398)||(36757751-36757829)
chr7 (320-398)||(36763531-36763608)
chr7 (320-398)||(36767275-36767353)
chr7 (41-160)||(42896996-42897107)
chr7 (42-160)||(39520795-39520905)
chr7 (41-160)||(19510517-19510639)
chr7 (44-160)||(27398046-27398165)
chr7 (42-160)||(27353916-27354037)
chr7 (42-160)||(34238153-34238274)
chr7 (42-160)||(48163403-48163524)
chr7 (55-160)||(9250421-9250529)
chr7 (324-398)||(35136309-35136383)
chr7 (42-159)||(38064590-38064710)
chr7 (337-398)||(11058729-11058790)
chr7 (44-160)||(34122616-34122735)
chr7 (41-160)||(11829683-11829805)
chr7 (344-400)||(26773305-26773361)
chr7 (42-160)||(47238616-47238727)
chr7 (116-160)||(49015069-49015113)
chr7 (293-400)||(16563967-16564087)
chr7 (293-400)||(16601575-16601695)
chr7 (42-160)||(16850781-16850902)
chr7 (117-160)||(23311795-23311838)
chr7 (42-160)||(26773711-26773832)
chr7 (42-160)||(38262994-38263115)
chr7 (114-160)||(19820863-19820909)
chr7 (257-295)||(47719952-47719990)
chr7 (293-347)||(1042858-1042914)
chr7 (337-398)||(21180133-21180194)
chr7 (344-400)||(1042792-1042848)
chr7 (257-308)||(9283712-9283763)
chr7 (257-308)||(25969720-25969771)
chr7 (114-160)||(8056333-8056379)
chr7 (343-400)||(4292005-4292062)
chr7 (119-160)||(18113938-18113979)
chr7 (118-159)||(27688010-27688051)
chr7 (119-159)||(7416689-7416729)
chr7 (344-400)||(8029147-8029203)
chr7 (118-154)||(12086912-12086948)
chr7 (323-400)||(19510929-19511010)
[»] chr3 (82 HSPs)
chr3 (42-308)||(30787412-30787682)
chr3 (42-308)||(55268867-55269132)
chr3 (44-301)||(7899576-7899837)
chr3 (42-301)||(21157587-21157849)
chr3 (44-308)||(47642017-47642273)
chr3 (45-308)||(28968511-28968778)
chr3 (117-308)||(19421492-19421683)
chr3 (44-308)||(6134233-6134500)
chr3 (41-308)||(19878953-19879214)
chr3 (38-398)||(22289483-22289845)
chr3 (180-397)||(29915929-29916148)
chr3 (180-397)||(29965082-29965301)
chr3 (42-284)||(45347297-45347541)
chr3 (178-308)||(45057152-45057284)
chr3 (172-301)||(25700890-25701021)
chr3 (180-308)||(38888936-38889067)
chr3 (41-378)||(2122701-2123046)
chr3 (174-308)||(13353046-13353182)
chr3 (44-284)||(13748323-13748565)
chr3 (318-398)||(25322256-25322336)
chr3 (216-308)||(983359-983453)
chr3 (190-350)||(42229811-42229973)
chr3 (257-396)||(28548260-28548401)
chr3 (306-400)||(52684614-52684708)
chr3 (306-398)||(25701050-25701142)
chr3 (132-284)||(41741947-41742099)
chr3 (52-359)||(19349404-19349700)
chr3 (172-308)||(20510007-20510145)
chr3 (42-160)||(52121178-52121299)
chr3 (306-400)||(21006100-21006194)
chr3 (291-378)||(48333210-48333299)
chr3 (338-398)||(19421741-19421801)
chr3 (293-398)||(20509895-20510002)
chr3 (41-160)||(35389747-35389869)
chr3 (257-308)||(2567120-2567171)
chr3 (42-160)||(40497328-40497449)
chr3 (306-388)||(7899468-7899550)
chr3 (43-160)||(52684200-52684320)
chr3 (42-160)||(10225161-10225271)
chr3 (44-160)||(48122825-48122944)
chr3 (320-396)||(13352936-13353012)
chr3 (320-388)||(28968812-28968880)
chr3 (293-378)||(48334155-48334242)
chr3 (42-160)||(7327710-7327831)
chr3 (42-160)||(28704725-28704846)
chr3 (42-160)||(37996810-37996931)
chr3 (322-400)||(2567006-2567084)
chr3 (320-398)||(19878842-19878919)
chr3 (43-160)||(28882677-28882797)
chr3 (320-398)||(45057040-45057118)
chr3 (51-158)||(983201-983311)
chr3 (43-99)||(19420904-19420960)
chr3 (42-160)||(22611383-22611494)
chr3 (320-388)||(47642307-47642375)
chr3 (230-306)||(212693-212771)
chr3 (293-400)||(22311115-22311235)
chr3 (343-400)||(28882292-28882349)
chr3 (343-400)||(50286959-50287016)
chr3 (344-396)||(1678896-1678948)
chr3 (344-396)||(25936294-25936346)
chr3 (293-350)||(35390135-35390194)
chr3 (54-98)||(49419245-49419289)
chr3 (112-160)||(52505832-52505880)
chr3 (327-398)||(983478-983549)
chr3 (117-160)||(3983773-3983816)
chr3 (257-308)||(21006214-21006265)
chr3 (117-160)||(45532979-45533022)
chr3 (320-398)||(47750672-47750750)
chr3 (257-308)||(52684543-52684594)
chr3 (52-105)||(2567444-2567497)
chr3 (271-308)||(22610614-22610650)
chr3 (271-308)||(25936416-25936452)
chr3 (41-110)||(29915858-29915927)
chr3 (41-110)||(29965011-29965080)
chr3 (119-160)||(42229752-42229793)
chr3 (271-308)||(45532400-45532436)
chr3 (344-388)||(7328075-7328119)
chr3 (344-388)||(28705591-28705635)
chr3 (42-82)||(38889159-38889199)
chr3 (344-396)||(42464356-42464408)
chr3 (344-396)||(48123675-48123727)
chr3 (344-396)||(52505039-52505091)
[»] chr6 (37 HSPs)
chr6 (114-397)||(19128226-19128510)
chr6 (42-308)||(7254928-7255188)
chr6 (42-395)||(27083983-27084328)
chr6 (111-308)||(10894370-10894569)
chr6 (172-308)||(31079731-31079866)
chr6 (42-257)||(26327153-26327368)
chr6 (44-359)||(234306-234627)
chr6 (114-308)||(6707892-6708086)
chr6 (257-378)||(22988885-22989008)
chr6 (257-378)||(23799388-23799511)
chr6 (53-301)||(13607643-13607894)
chr6 (321-398)||(3299339-3299416)
chr6 (178-287)||(13045248-13045359)
chr6 (53-377)||(11105295-11105645)
chr6 (41-160)||(32130658-32130780)
chr6 (42-160)||(25834495-25834616)
chr6 (320-398)||(10894258-10894336)
chr6 (306-400)||(32018383-32018477)
chr6 (53-160)||(8356967-8357077)
chr6 (293-398)||(26327567-26327674)
chr6 (42-160)||(1036825-1036946)
chr6 (257-308)||(3212785-3212836)
chr6 (180-308)||(13061225-13061355)
chr6 (306-400)||(3212856-3212950)
chr6 (44-160)||(31195868-31195987)
chr6 (42-160)||(3212475-3212596)
chr6 (306-398)||(6707779-6707871)
chr6 (293-350)||(31740489-31740548)
chr6 (257-308)||(32018313-32018363)
chr6 (324-378)||(7255227-7255281)
chr6 (343-400)||(32130271-32130328)
chr6 (293-398)||(13045121-13045227)
chr6 (119-158)||(10894584-10894623)
chr6 (53-104)||(32017986-32018037)
chr6 (322-398)||(13607520-13607593)
chr6 (271-308)||(8357624-8357660)
chr6 (293-398)||(13061114-13061220)
[»] chr1 (52 HSPs)
chr1 (42-397)||(9781640-9782000)
chr1 (120-308)||(41675841-41676028)
chr1 (46-398)||(29167949-29168304)
chr1 (119-301)||(38218461-38218643)
chr1 (172-398)||(9528605-9528832)
chr1 (257-398)||(10822610-10822751)
chr1 (132-398)||(24851565-24851849)
chr1 (52-308)||(24589974-24590225)
chr1 (306-398)||(32380819-32380911)
chr1 (180-308)||(2472774-2472904)
chr1 (196-308)||(36551537-36551651)
chr1 (172-397)||(29861926-29862156)
chr1 (293-398)||(47654936-47655043)
chr1 (41-159)||(14167081-14167202)
chr1 (172-308)||(47654793-47654931)
chr1 (119-395)||(10763737-10764009)
chr1 (320-397)||(15417695-15417772)
chr1 (172-284)||(34096428-34096542)
chr1 (242-304)||(33039809-33039873)
chr1 (320-388)||(36551685-36551752)
chr1 (42-160)||(6916873-6916994)
chr1 (37-160)||(8132176-8132302)
chr1 (306-397)||(14167334-14167425)
chr1 (42-160)||(38330425-38330546)
chr1 (42-160)||(52895712-52895833)
chr1 (324-398)||(32797474-32797548)
chr1 (293-400)||(34432174-34432283)
chr1 (306-388)||(37922479-37922561)
chr1 (44-160)||(20409553-20409672)
chr1 (44-160)||(37104120-37104239)
chr1 (41-308)||(3708137-3708400)
chr1 (54-160)||(1036469-1036578)
chr1 (42-160)||(1043225-1043346)
chr1 (53-160)||(2364686-2364796)
chr1 (42-160)||(28949240-28949361)
chr1 (42-160)||(37346847-37346968)
chr1 (343-400)||(31653028-31653085)
chr1 (172-220)||(48715166-48715214)
chr1 (44-99)||(10822402-10822457)
chr1 (42-160)||(34432382-34432503)
chr1 (112-158)||(2222980-2223026)
chr1 (336-398)||(3708037-3708099)
chr1 (114-160)||(28659299-28659345)
chr1 (271-308)||(5984919-5984955)
chr1 (293-400)||(13012609-13012722)
chr1 (271-308)||(25257349-25257385)
chr1 (271-308)||(30324452-30324488)
chr1 (293-347)||(43190029-43190085)
chr1 (344-388)||(8133021-8133065)
chr1 (124-160)||(32381058-32381094)
chr1 (172-220)||(33039741-33039789)
chr1 (320-352)||(38218682-38218714)
[»] chr8 (58 HSPs)
chr8 (172-398)||(3892093-3892321)
chr8 (42-398)||(37372257-37372609)
chr8 (44-281)||(32424920-32425161)
chr8 (172-398)||(27968234-27968471)
chr8 (306-398)||(20182654-20182746)
chr8 (172-305)||(38388796-38388931)
chr8 (172-302)||(7411731-7411863)
chr8 (52-160)||(5818310-5818421)
chr8 (172-277)||(20182502-20182609)
chr8 (42-160)||(36483433-36483554)
chr8 (172-398)||(28025220-28025457)
chr8 (293-398)||(27108934-27109041)
chr8 (306-398)||(27886464-27886556)
chr8 (306-398)||(27945122-27945214)
chr8 (42-160)||(22201336-22201457)
chr8 (42-160)||(32759371-32759492)
chr8 (42-160)||(32877435-32877556)
chr8 (306-398)||(41098706-41098798)
chr8 (42-160)||(16384615-16384736)
chr8 (42-160)||(34901381-34901502)
chr8 (257-308)||(40412759-40412810)
chr8 (42-160)||(43771703-43771824)
chr8 (42-160)||(45217219-45217340)
chr8 (306-400)||(8170843-8170937)
chr8 (306-400)||(40412830-40412924)
chr8 (179-308)||(29355760-29355885)
chr8 (41-160)||(2872909-2873031)
chr8 (42-160)||(6028485-6028606)
chr8 (306-400)||(7411889-7411983)
chr8 (42-276)||(27886188-27886425)
chr8 (42-276)||(27944846-27945083)
chr8 (324-398)||(28737803-28737877)
chr8 (343-400)||(25022602-25022659)
chr8 (112-160)||(24100192-24100240)
chr8 (42-160)||(4245938-4246059)
chr8 (257-308)||(8170957-8171008)
chr8 (42-105)||(19436272-19436335)
chr8 (42-105)||(19572421-19572484)
chr8 (257-308)||(27109046-27109097)
chr8 (42-159)||(13422206-13422326)
chr8 (296-397)||(32855-32961)
chr8 (53-160)||(32638865-32638965)
chr8 (306-398)||(38388954-38389044)
chr8 (293-350)||(19436637-19436696)
chr8 (293-350)||(19572786-19572845)
chr8 (41-160)||(25022122-25022244)
chr8 (344-400)||(32877906-32877962)
chr8 (39-99)||(40412430-40412490)
chr8 (344-396)||(43770921-43770973)
chr8 (42-105)||(28876623-28876686)
chr8 (117-158)||(5539500-5539541)
chr8 (293-347)||(6028875-6028931)
chr8 (271-308)||(12579875-12579911)
chr8 (271-308)||(32760098-32760134)
chr8 (293-347)||(32877840-32877896)
chr8 (344-396)||(4246778-4246830)
chr8 (53-105)||(19948053-19948105)
chr8 (344-396)||(32638431-32638483)
[»] scaffold0285 (2 HSPs)
scaffold0285 (52-233)||(13258-13439)
scaffold0285 (306-398)||(13664-13756)
[»] scaffold0037 (2 HSPs)
scaffold0037 (42-160)||(27790-27901)
scaffold0037 (271-307)||(27125-27160)
[»] scaffold0640 (1 HSPs)
scaffold0640 (42-160)||(8091-8212)
[»] scaffold0250 (1 HSPs)
scaffold0250 (46-160)||(5514-5631)
[»] scaffold0005 (2 HSPs)
scaffold0005 (320-398)||(202515-202593)
scaffold0005 (42-105)||(44647-44710)
[»] scaffold0112 (2 HSPs)
scaffold0112 (44-160)||(42075-42183)
scaffold0112 (271-308)||(41422-41458)


Alignment Details
Target: chr4 (Bit Score: 288; Significance: 1e-161; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 288; E-Value: 1e-161
Query Start/End: Original strand, 1 - 423
Target Start/End: Complemental strand, 37992694 - 37992270
Alignment:
Q  1 cattgagaccattagcaatatatttgaattgtgaaatcatttgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcact 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||||| ||||| |||||||||| |||||     
T  37992694 cattcagaccattagcaatatatttgaattgtgaaatcatttgtgaagctccggtacttcaaaatggaagacgtattgtatcccttgcggatcttgcacc 37992595  T
Q  101 gatacatgtca---attttccgatatgtatcagaagagtatccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacata 197  Q
    ||||||||||    | ||||||||| |||||||||||||||||||||||||||||||||||||         | |||||||||||| |||| ||||||||    
T  37992594 gatacatgtctgatactttccgatacgtatcagaagagtatccaaagattaaattttatttttttaaaaaa-ataattatccgataattcccgatacata 37992496  T
Q  198 tcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaattaattaaaataacttaactcttgagtactgatgtgttctt 297  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  37992495 tcaggagagtatctgatgattattctgcaccgatatctgccccgatatttctcaattaattaactaaaataacttaactcttgagtaccgatgtgttctt 37992396  T
Q  298 ttttggatatatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatc 397  Q
    || | ||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37992395 ttcttgatatatagtataggactaacaatgttccttttggatataatatagcactaatggtgctctttttgggatatattgggtatgtaatcgactaatc 37992296  T
Q  398 accgttctcatctcgccgtcaccacc 423  Q
    ||||||||||||||||||||||||||    
T  37992295 accgttctcatctcgccgtcaccacc 37992270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 114 - 366
Target Start/End: Original strand, 2586409 - 2586663
Alignment:
Q  114 tttccgatatgtatcagaagagtatccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctga 213  Q
    ||||| ||| ||||||||||||||||| ||||||||| ||| |||||        |||  |||||| |||||||| |||||||| |||||||||||||||    
T  2586409 tttccaatacgtatcagaagagtatccgaagattaaaatttgtttttttaaaaaataa--ttatcctatacttcccgatacataccaggagagtatctga 2586506  T
Q  214 tgattattctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttcttttttggat--atat 309  Q
    | ||||| || ||||| |||||||| ||||| ||| |||||||  |||| |||||||||||||||||| || |||||||||||||||||| |||  ||||    
T  2586507 tcattatcctacaccggtatctgccccgatacttcccaattaatgttaactaaaataacttaactcttcaggactgatgtgttcttttttagatcgatat 2586606  T
Q  310 agtatatgaataacaatgttccttttggatataatataacactaatggtgctctttt 366  Q
    ||||||  | ||||||||||||||||||||||||||||||||| ||| |||||||||    
T  2586607 agtataacattaacaatgttccttttggatataatataacactgatgatgctctttt 2586663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 117 - 398
Target Start/End: Complemental strand, 31946268 - 31945988
Alignment:
Q  117 ccgatatgtatcagaagagtatccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatga 216  Q
    |||||| ||||||||||||||||| |||||||||||||||||||        |||  ||||||||||||||| ||||| ||||||||||||||| ||| |    
T  31946268 ccgatacgtatcagaagagtatccgaagattaaattttatttttaaaaaaaataa--ttatccgatacttcccgatacgtatcaggagagtatccgataa 31946171  T
Q  217 ttattctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttcttttttggatatata-gta 313  Q
    |||| ||| | | ||||||||| | ||| ||| |||||||  |||||||||||||||||||||||||||| |  ||  |||||||||||||  ||| |||    
T  31946170 ttatcctgtaacaatatctgccccaatacttcccaattaatgttaattaaaataacttaactcttgagta-tagtg-cttcttttttggatcgatatgta 31946073  T
Q  314 tatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||  | |||||||||||||||| |||||| |||| |||| |||||||||||||||||||||||||  |||||||| |||||||||    
T  31946072 tagcactaacaatgttccttttagatatagtatagcacttatggtgctctttttgggatatattgtgtatgtaattgactaatca 31945988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 44 - 398
Target Start/End: Original strand, 40694070 - 40694427
Alignment:
Q  44 tgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatg--tca-attttccgatatgtatcagaagagtatcc 140  Q
    ||||||| ||||||||||||||||| || |||||||||| | |||| || |||||| ||||| ||  | | | || |||||| ||||||| ||||||||     
T  40694070 tgaagccccgatacttcaaaatggatgatgtatcgtatcccatgcgtattctgcaccgatacctgattgatacttcccgatacgtatcaggagagtatct 40694169  T
Q  141 aaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctc 240  Q
     |||||||||||||||||||        |||  ||||| ||||||||| ||||| ||| |||||||||||  || ||||| |||||| |||||||||| |    
T  40694170 gaagattaaattttatttttttataaaataa--ttatctgatacttcccgatacgtatgaggagagtatccaataattatcctgcactgatatctgcccc 40694267  T
Q  241 gatatttctcaattaat--taattaaaataacttaactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttttg 336  Q
     ||| ||| ||||||||  ||| ||||||||||||||||||||||| | |||  |||||||||| ||  ||||||||||  | |||||||||| ||||||    
T  40694268 aatacttcccaattaatattaactaaaataacttaactcttgagta-taatgc-ttcttttttgaatcgatatagtatagtactaacaatgtttcttttg 40694365  T
Q  337 gatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||||||| |||| ||| ||||||||||||||||||||   |||||||| |||||||||    
T  40694366 gatataatatatcacttatgatgctctttttgggatatattacgtatgtaattgactaatca 40694427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 117 - 308
Target Start/End: Original strand, 36943745 - 36943936
Alignment:
Q  117 ccgatatgtatcagaagagtatccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatga 216  Q
    |||||| ||||||||||||||||| ||||||||| |||||||||        |||  ||||| ||||||||||||||| ||||||||||||||||||| |    
T  36943745 ccgatacgtatcagaagagtatccgaagattaaaatttattttttttaaaaataa--ttatctgatacttcctgatacgtatcaggagagtatctgatca 36943842  T
Q  217 ttattctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    |||| || ||||| ||||||||  |||| ||| |||||||  |||| ||||||||||||||||||||||| ||||||||||||||||| |||||    
T  36943843 ttatcctacaccggtatctgccctgatacttcccaattaatgttaactaaaataacttaactcttgagtagtgatgtgttcttttttgaatata 36943936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 175 - 378
Target Start/End: Original strand, 51858927 - 51859132
Alignment:
Q  175 tatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataactt 272  Q
    |||||||||||||| ||||| ||||||||||||||| ||| |||||  ||||| |||| ||||||| ||| ||| |||||||  |||| |||||||||||    
T  51858927 tatccgatacttcccgatacgtatcaggagagtatccgataattatcttgcactgatacctgcctcaatacttcccaattaatgttaactaaaataactt 51859026  T
Q  273 aactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttggg 370  Q
    |||||||||||| | |||  |||||||||||||  ||||||||||  | |||||||||| |||||||||||| |||| |||| ||| ||||||||||| |    
T  51859027 aactcttgagta-ttatg-cttcttttttggatcgatatagtataacactaacaatgtttcttttggatatagtatagcacttatgatgctctttttgtg 51859124  T
Q  371 atatattg 378  Q
    ||||||||    
T  51859125 atatattg 51859132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 172 - 397
Target Start/End: Original strand, 1177106 - 1177334
Alignment:
Q  172 aattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataa 269  Q
    ||||||||||||||||| ||||| |||||||| |||||| ||| ||||| ||||||| ||| ||||| | ||| ||| |||||||  |||| ||||||||    
T  1177106 aattatccgatacttcccgatacgtatcaggaaagtatccgataattatcctgcacctatacctgccccaataattcccaattaacgttaaataaaataa 1177205  T
Q  270 cttaactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataacactaatggtgc-tctttt 366  Q
    ||||||||||||||| | |||  |||||||||||||  ||||||||||  | |||||||||| |||||||||||| |||| |||| ||||| | | ||||    
T  1177206 cttaactcttgagta-taatg-cttcttttttggattgatatagtatagcactaacaatgtttcttttggatatagtatagcacttatggtacttttttt 1177303  T
Q  367 tgggatatattggatatgtaatcgactaatc 397  Q
    ||||||||||||  |||||||| ||||||||    
T  1177304 tgggatatattgtgtatgtaattgactaatc 1177334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 117 - 308
Target Start/End: Complemental strand, 46431975 - 46431784
Alignment:
Q  117 ccgatatgtatcagaagagtatccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatga 216  Q
    |||||| ||||||  ||||||||||||||||||||||||||||         |||  |||||||||||||   ||||  ||||||||||||||| ||| |    
T  46431975 ccgatacgtatcaagagagtatccaaagattaaattttattttaaaaaaaaataa--ttatccgatacttttcgatatgtatcaggagagtatccgataa 46431878  T
Q  217 ttattctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    ||||  |||||||||| |||||  |||||||| ||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  46431877 ttatcatgcaccgatacctgccctgatatttcacaattaatgttaactaaaataacttaactcttgagtactgatgtgttcttttttggatata 46431784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 118 - 301
Target Start/End: Complemental strand, 24793772 - 24793589
Alignment:
Q  118 cgatatgtatcagaagagtatccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgat 217  Q
    ||||| ||||||||||||||||| |||||||||||||||||||        |||  ||||| |||||||||  |||| ||||||||||||||| ||| ||    
T  24793772 cgatacgtatcagaagagtatccgaagattaaattttattttttaaaaaaataa--ttatctgatacttcccaatacgtatcaggagagtatccgatcat 24793675  T
Q  218 tattctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataacttaactcttgagtactgatgtgttctttttt 301  Q
    ||| || ||||  || || |||||||| ||| ||||||||  ||| ||||||||||||||||||||||||||||||||||||||||    
T  24793674 tatcctacaccagtaactacctcgatacttcccaattaatgttaactaaaataacttaactcttgagtactgatgtgttctttttt 24793589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 44 - 359
Target Start/End: Complemental strand, 36512052 - 36511733
Alignment:
Q  44 tgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtatcc 140  Q
    ||||||| ||||||||||||||||  ||||||| ||||| | |||| ||||||| | ||||| || |    | ||||||||| |||||||||||||||||    
T  36512052 tgaagccccgatacttcaaaatggttgacgtattgtatcccgtgcgtatcctgcgccgatacttgcccgatactttccgatacgtatcagaagagtatcc 36511953  T
Q  141 aaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctc 240  Q
     |||||||||||||||||||         | ||||||||||||||||||||||| |||||||| |||||| ||| ||||| ||| ||  ||| ||||| |    
T  36511952 gaagattaaattttatttttttaaaaaa-ataattatccgatacttcctgatacgtatcaggaaagtatccgataattatcctgaacttatacctgcccc 36511854  T
Q  241 gatatttctcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttttg 336  Q
     ||| ||| |||||||  |||| ||||||||||||||||||||||| |  ||  |||||||||||||  ||||| ||||  | ||| |||||| ||||||    
T  36511853 aataattcccaattaacgttaaataaaataacttaactcttgagta-tagtg-cttcttttttggatcgatataatatagcactaagaatgtttcttttg 36511756  T
Q  337 gatataatataacactaatggtg 359  Q
    |||||| |||| |||| ||||||    
T  36511755 gatatagtatagcacttatggtg 36511733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 52 - 308
Target Start/End: Original strand, 17892256 - 17892515
Alignment:
Q  52 cgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtatccaaagatta 148  Q
    ||||||||||||||||| |||||| |||||| | |||| ||| | ||| ||||| || |    | || |||||||||||||||||||||||| |||||||    
T  17892256 cgatacttcaaaatggacgacgtaccgtatctcatgcgtatcatacaccgatacctgcccgatacttcccgatatgtatcagaagagtatccgaagatta 17892355  T
Q  149 aattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttc 248  Q
    |||||||||||         |||  ||||  |||||||||  |||| |||||||||||||||  || ||||| || ||||  |||||||| ||||| |||    
T  17892356 aattttattttaaaaaaaaataa--ttatatgatacttcccaatacgtatcaggagagtatccaatcattatcctacaccagtatctgccccgatacttc 17892453  T
Q  249 tcaattaat--taattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
     ||||||||  |||  |||||||||||||||||||||||||||||||||||||||| |||||    
T  17892454 ccaattaatgttaacaaaaataacttaactcttgagtactgatgtgttcttttttgaatata 17892515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 112 - 301
Target Start/End: Complemental strand, 42630532 - 42630342
Alignment:
Q  112 attttccgatatgtatcagaagagtatccaaagattaaattttatttttnnnnnnnntaa-aattatccgatacttcctgatacatatcaggagagtatc 210  Q
    ||||||||||| ||||||| ||| ||||| ||||||||||||||||||         ||| ||||||||||||||||||||||| ||||||| |||||||    
T  42630532 attttccgatacgtatcaggagaatatccgaagattaaattttatttt--aaaaaaataataattatccgatacttcctgatacgtatcaggtgagtatc 42630435  T
Q  211 tgatgattattctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttctttttt 301  Q
     ||| |||||  ||||| |||||||||  ||||| ||| |||||||  |||| |||||||||| ||||||| |||||| ||||||||||||||    
T  42630434 cgataattatcttgcactgatatctgctccgatacttcacaattaatgttaactaaaataactgaactcttcagtacttatgtgttctttttt 42630342  T

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Target: chr4; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 112 - 308
Target Start/End: Complemental strand, 3109352 - 3109156
Alignment:
Q  112 attttccgatatgtatcagaagagtatccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatct 211  Q
    ||||| ||||| ||||||||||| ||  | |||||||||||||||||||        |||  ||||||||||||||  ||||| |||| ||||||||||     
T  3109352 atttttcgatacgtatcagaagattaatcgaagattaaattttattttttaaacaaataa--ttatccgatacttctcgatacgtatccggagagtatcc 3109255  T
Q  212 gatgattattctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
     || ||||| || ||||| |||||||| ||||| ||| ||||||||  ||| ||||||||||||||||||||||||||||||||| ||||||| |||||    
T  3109254 aatcattatcctacaccggtatctgccccgatacttcccaattaatgttaactaaaataacttaactcttgagtactgatgtgttattttttgaatata 3109156  T

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Target: chr4; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 181 - 306
Target Start/End: Original strand, 49470419 - 49470545
Alignment:
Q  181 atacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataacttaactct 278  Q
    |||||||| ||||| ||||||||||||||||||| ||||| |||||| |||||||||| ||||| ||| |||||||  |||| |||||||||||||||||    
T  49470419 atacttcccgatacgtatcaggagagtatctgataattatcctgcactgatatctgccccgatacttc-caattaatgttaactaaaataacttaactct 49470517  T
Q  279 tgagtactgatgtgttcttttttggata 306  Q
    |||||||| ||||   ||||||||||||    
T  49470518 tgagtactcatgtaaacttttttggata 49470545  T

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Target: chr4; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 190 - 308
Target Start/End: Complemental strand, 44522017 - 44521897
Alignment:
Q  190 gatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataacttaactcttgagtactg 287  Q
    ||||| ||||||||||||||| ||| ||||| || ||  |||||||||| ||||| ||  ||||||||  ||| |||||||||||||||||||||||||     
T  44522017 gatacgtatcaggagagtatccgataattatccttcattgatatctgccccgatactttccaattaatgttaactaaaataacttaactcttgagtacta 44521918  T
Q  288 atgtgttcttttttggatata 308  Q
    ||||||||||||||| |||||    
T  44521917 atgtgttcttttttgaatata 44521897  T

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Target: chr4; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 293 - 398
Target Start/End: Complemental strand, 44521892 - 44521785
Alignment:
Q  293 ttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcg 390  Q
    |||||||||||||  ||||||||||  | ||||||||||||||||||||||| |||| ||||||||||||| |||||| ||||| |||  |||||||| |    
T  44521892 ttcttttttggatcgatatagtataacattaacaatgttccttttggatatagtatagcactaatggtgctttttttgagatattttgtgtatgtaattg 44521793  T
Q  391 actaatca 398  Q
    ||||||||    
T  44521792 actaatca 44521785  T

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Target: chr4; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 293 - 398
Target Start/End: Complemental strand, 55900994 - 55900887
Alignment:
Q  293 ttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcg 390  Q
    |||||||||||||  ||||||||||  | ||||||||||| |||||||||||||||| |||| ||| |||||||||||| ||||||||  |||||||| |    
T  55900994 ttcttttttggatcgatatagtataacactaacaatgttcattttggatataatatagcactgatgatgctctttttggtatatattgtgtatgtaattg 55900895  T
Q  391 actaatca 398  Q
    ||||||||    
T  55900894 actaatca 55900887  T

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Target: chr4; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 172 - 308
Target Start/End: Original strand, 754299 - 754437
Alignment:
Q  172 aattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataa 269  Q
    |||||||  |||||||||||||| ||||||||||||||| ||| ||||| || |||||||||| ||| ||||| ||  || ||||  |||| |||| |||    
T  754299 aattatcatatacttcctgatacgtatcaggagagtatccgatcattatcctacaccgatatccgccccgatacttaccatttaatgttaactaaactaa 754398  T
Q  270 cttaactcttgagtactgatgtgttcttttttggatata 308  Q
    ||||||||||| ||| ||||||||| ||||||| |||||    
T  754399 cttaactcttgtgtattgatgtgttattttttgaatata 754437  T

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Target: chr4; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 177 - 398
Target Start/End: Original strand, 51674923 - 51675145
Alignment:
Q  177 tccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataacttaa 274  Q
    |||||||||| | |||| ||||||| | ||||| | || ||||| |||||| ||||||||| || ||||||| ||||||||  ||| |||||||||||||    
T  51674923 tccgatactttccgatatatatcagaaaagtattttataattatcctgcacggatatctgcttcaatatttcccaattaatgttaactaaaataacttaa 51675022  T
Q  275 ctcttgagtactgatgtgttcttttttggata--tatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggat 372  Q
     | |||||||  | ||  ||||||||||||||  |||||||||| | ||||||| |||||||   ||||| ||||||||| ||| | |||||||| ||||    
T  51675023 tttttgagtatag-tgc-ttcttttttggatagatatagtatatcactaacaatattcctttctaatatagtataacacttatgattctcttttt-ggat 51675119  T
Q  373 atattggatatgtaatcgactaatca 398  Q
    |||||| ||||||||| || ||||||    
T  51675120 atattgtatatgtaattgattaatca 51675145  T

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Target: chr4; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 41 - 160
Target Start/End: Original strand, 53322334 - 53322456
Alignment:
Q  41 ttgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatg-tcaat--tttccgatatgtatcagaagagta 137  Q
    |||||||||| ||||||||||||||||| |||||||||||||  ||||| |||||||||||||||  | || ||  || |||||| ||||| | ||||||    
T  53322334 ttgtgaagccccgatacttcaaaatggatgacgtatcgtatcctttgcgtatcctgcactgataccggctcgatacttcccgatacgtatccggagagta 53322433  T
Q  138 tccaaagattaaattttattttt 160  Q
    |||||| ||||||||||||||||    
T  53322434 tccaaatattaaattttattttt 53322456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 320 - 388
Target Start/End: Complemental strand, 3109122 - 3109054
Alignment:
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaat 388  Q
    ||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||  ||||||||    
T  3109122 taacaatgttccttttggatatagtataacacagatggtgctctttttgggatatattgtgtatgtaat 3109054  T

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Target: chr4; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 306 - 378
Target Start/End: Complemental strand, 24793562 - 24793490
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattg 378  Q
    ||||||||||  | ||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||    
T  24793562 atatagtataacactaacaatgttccttttggatatagtataacactgatgatgctctttttgggatatattg 24793490  T

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Target: chr4; HSP #23
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 320 - 388
Target Start/End: Original strand, 36943970 - 36944038
Alignment:
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaat 388  Q
    ||||||||||||||||||||||| ||||||||| ||| |||||||||||||||||||||  ||||||||    
T  36943970 taacaatgttccttttggatatagtataacactgatgatgctctttttgggatatattgtgtatgtaat 36944038  T

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Target: chr4; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 293 - 396
Target Start/End: Complemental strand, 258938 - 258832
Alignment:
Q  293 ttcttttttggat--atatagtatatgaataacaatgttcc-ttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatc 389  Q
    |||||||||||||  ||||||||||  | |||||||||||| ||||||||||| ||||||||| ||||| ||||||||| |||||||||  ||||||||     
T  258938 ttcttttttggatcaatatagtatagcagtaacaatgttccgttttggatatagtataacacttatggtactctttttgagatatattgtgtatgtaatt 258839  T
Q  390 gactaat 396  Q
    |||||||    
T  258838 gactaat 258832  T

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Target: chr4; HSP #25
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 321 - 396
Target Start/End: Original strand, 47607381 - 47607456
Alignment:
Q  321 aacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaat 396  Q
    ||||||||| |||||||||||| |||| |||| |||||||||||||||||||||||||  |||||||| |||||||    
T  47607381 aacaatgtttcttttggatatagtatagcacttatggtgctctttttgggatatattgtgtatgtaattgactaat 47607456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 320 - 398
Target Start/End: Complemental strand, 30683499 - 30683421
Alignment:
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||||||||||||| ||||| ||||||| | ||||||||||||||||||||||||  ||||||||| || ||||||    
T  30683499 taacaatgttccttttgaatatagtataacattgatggtgctctttttgggatatattatatatgtaattgattaatca 30683421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 257 - 308
Target Start/End: Original strand, 24784588 - 24784639
Alignment:
Q  257 ttaattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  24784588 ttaactaaaataacttaactcttgagtactgatgtgttcttttttcgatata 24784639  T

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Target: chr4; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 257 - 308
Target Start/End: Complemental strand, 24823678 - 24823627
Alignment:
Q  257 ttaattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  24823678 ttaactaaaataacttaactcttgagtactgatgtgttcttttttcgatata 24823627  T

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Target: chr4; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 257 - 308
Target Start/End: Original strand, 52721570 - 52721621
Alignment:
Q  257 ttaattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  52721570 ttaactaaaataacttaactcttgagtactgatgtgttcttttttcgatata 52721621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 306 - 400
Target Start/End: Original strand, 39957975 - 39958069
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatcacc 400  Q
    ||||||||||  | ||||||||||| |||| |||||| ||||||||  ||| |||||||||||| ||||||||  |||||||| |||||||||||    
T  39957975 atatagtatagcactaacaatgttctttttagatatagtataacaccgatgatgctctttttggtatatattgtgtatgtaattgactaatcacc 39958069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 320 - 398
Target Start/End: Complemental strand, 42630295 - 42630217
Alignment:
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||||||||||||||||| | ||||||||| ||| |||| ||||| ||||||||||  |||||||| |||||||||    
T  42630295 taacaatgttccttttggatagagtataacactgatgatgcttttttttggatatattgtgtatgtaattgactaatca 42630217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 160
Target Start/End: Complemental strand, 8064227 - 8064108
Alignment:
Q  44 tgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtatcc 140  Q
    ||||||| ||||||||||||||||| |||||| |||||| | |||| ||||||||| ||||| || |    | ||||||||| ||||| | ||||||||     
T  8064227 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtatct 8064128  T
Q  141 aaagattaaattttattttt 160  Q
    ||| ||||||||||||||||    
T  8064127 aaatattaaattttattttt 8064108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 45 - 160
Target Start/End: Original strand, 19738698 - 19738816
Alignment:
Q  45 gaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtatcca 141  Q
    |||||| ||||||||||||||||| |||||| |||||| | |||| ||||||||| ||||| || |    | || |||||| ||||| | ||||||||||    
T  19738698 gaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatcca 19738797  T
Q  142 aagattaaattttattttt 160  Q
    || ||||||||||||||||    
T  19738798 aatattaaattttattttt 19738816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 188 - 308
Target Start/End: Complemental strand, 55901122 - 55900999
Alignment:
Q  188 ctgatacatatcaggagagtatctgatgattattctgcaccgatatc-tgcctcgatatttctcaattaat--taattaaaataacttaactcttgagta 284  Q
    ||||||| |||||| |||||||  |||  |||| || |||||||| | |||| | ||||||| ||||||||  | | ||||| |||||||||||||||||    
T  55901122 ctgatacttatcagaagagtattcgatagttatcctacaccgataccctgccccaatatttcccaattaatggtgactaaaaaaacttaactcttgagta 55901023  T
Q  285 ctgatgtgttcttttttggatata 308  Q
    ||||||||||||||| ||||||||    
T  55901022 ctgatgtgttcttttatggatata 55900999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 41145610 - 41145731
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| ||||||  ||||| | |||| ||||||||  ||||| ||||    | ||||||||| ||||  | |||||||    
T  41145610 tgtgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcatcgatacctgtccgatactttccgatacgtattcggagagtat 41145709  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  41145710 ccaaatattaaattttattttt 41145731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 52122989 - 52122868
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| ||||||  ||||| | |||| ||||||||| ||||| || |    | || |||||| ||||| | |||||||    
T  52122989 tgtgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtat 52122890  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  52122889 ccaaatattaaattttattttt 52122868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 5834828 - 5834949
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatg-tcaat--tttccgatatgtatcagaagagtat 138  Q
    ||||||||  ||||||||||||||||| |||||| |||||| | |||| ||||||||| ||||| ||  | ||  || |||||| ||||| | |||||||    
T  5834828 tgtgaagctccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatgcttcccgatacgtatcgggagagtat 5834927  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  5834928 ccaaatattaaattttattttt 5834949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 320 - 398
Target Start/End: Complemental strand, 7952950 - 7952872
Alignment:
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||||||||||||||||||| ||||||| | |||  |||| ||||||||||||||  ||||||||| || ||||||    
T  7952950 taacaatgttccttttggatatagtataacattgatgacgctccttttgggatatattatatatgtaattgattaatca 7952872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 320 - 398
Target Start/End: Original strand, 14614783 - 14614861
Alignment:
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||| || ||||||||||||| |||||| | ||| || ||||||||||||||| || ||||||||| |||||||||    
T  14614783 taacaatatttcttttggatataacataacatttatgatgttctttttgggatatactgtatatgtaattgactaatca 14614861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 306 - 400
Target Start/End: Original strand, 24784659 - 24784753
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatcacc 400  Q
    ||||||||||  | || |||||||| ||||||||||| |||| |||  ||| |||||||||||| ||||||||  |||||||| |||||||||||    
T  24784659 atatagtatagcactatcaatgttctttttggatatagtatagcaccgatgatgctctttttggtatatattgtgtatgtaattgactaatcacc 24784753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 306 - 400
Target Start/End: Complemental strand, 24823607 - 24823513
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatcacc 400  Q
    ||||||||||  | || |||||||| ||||||||||| |||| |||  ||| |||||||||||| ||||||||  |||||||| |||||||||||    
T  24823607 atatagtatagcactatcaatgttctttttggatatagtatagcaccgatgatgctctttttggtatatattgtgtatgtaattgactaatcacc 24823513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 306 - 400
Target Start/End: Original strand, 52721641 - 52721735
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatcacc 400  Q
    ||||||||||  | ||||||||||| ||||| ||||| |||| || | ||| |||||||||||| ||||||||  |||||||| |||||||||||    
T  52721641 atatagtataacactaacaatgttctttttgaatatagtatatcattgatgatgctctttttggtatatattgtgtatgtaattgactaatcacc 52721735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 388
Target Start/End: Original strand, 17892549 - 17892617
Alignment:
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaat 388  Q
    ||||||||||||||||| ||||| ||||||||| ||| ||||||||||||  |||||||  ||||||||    
T  17892549 taacaatgttccttttgaatatagtataacactgatgatgctctttttggtttatattgtgtatgtaat 17892617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 105
Target Start/End: Original strand, 14795021 - 14795084
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatac 105  Q
    ||||||||| ||||||||||||||||| |||||| |||||| | |||| ||||||||| |||||    
T  14795021 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatac 14795084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 105
Target Start/End: Original strand, 28376994 - 28377057
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatac 105  Q
    ||||||||| ||||||||||||||||| ||||||||||||| | || | ||||||||| |||||    
T  28376994 tgtgaagccccgatacttcaaaatggatgacgtatcgtatctcctgtgtatcctgcaccgatac 28377057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 257 - 308
Target Start/End: Original strand, 39957904 - 39957955
Alignment:
Q  257 ttaattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    |||| ||||||||||||| |||||| ||||||||||||||||||| ||||||    
T  39957904 ttaactaaaataacttaattcttgaatactgatgtgttcttttttcgatata 39957955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 160
Target Start/End: Complemental strand, 38492377 - 38492268
Alignment:
Q  44 tgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtcaattttccgatatgtatcagaagagtatccaaa 143  Q
    ||||||| ||||||||||||||||| ||||||  ||||| | |||| ||||||||| ||||| ||        |||||| ||||| | ||||||||||||    
T  38492377 tgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatacctg-------cccgatacgtatccggagagtatccaaa 38492285  T
Q  144 gattaaattttattttt 160  Q
     ||||||||||||||||    
T  38492284 tattaaattttattttt 38492268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 43 - 159
Target Start/End: Complemental strand, 3403694 - 3403585
Alignment:
Q  43 gtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtcaattttccgatatgtatcagaagagtatccaa 142  Q
    |||||||| | ||||||||||||||| |||||| |||||| | || | ||||||||||||||    ||   || |||||| ||||| | |||||||||||    
T  3403694 gtgaagccccaatacttcaaaatggatgacgtaccgtatcccctgtgtatcctgcactgata----tc---ttcccgatacgtatccggagagtatccaa 3403602  T
Q  143 agattaaattttatttt 159  Q
    | |||||||||||||||    
T  3403601 atattaaattttatttt 3403585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 42 - 99
Target Start/End: Original strand, 47607108 - 47607165
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcac 99  Q
    ||||||||| ||||||||||||||||| ||| ||||||||| | |||| |||||||||    
T  47607108 tgtgaagccccgatacttcaaaatggatgacatatcgtatctcctgcgtatcctgcac 47607165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 306 - 398
Target Start/End: Original strand, 49470563 - 49470655
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||||| | | ||||||||||||||||||||||| |||| || | ||| ||| |||||||| | ||||||  |||||||| || ||||||    
T  49470563 atatagtatgtcactaacaatgttccttttggatatagtatagcattgatgatgcactttttggaaaatattgtgtatgtaattgattaatca 49470655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 160
Target Start/End: Original strand, 21637741 - 21637784
Alignment:
Q  117 ccgatatgtatcagaagagtatccaaagattaaattttattttt 160  Q
    |||||| ||||||| ||||||||| |||||||||||||||||||    
T  21637741 ccgatacgtatcaggagagtatccgaagattaaattttattttt 21637784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 138
Target Start/End: Original strand, 51674854 - 51674955
Alignment:
Q  40 tttgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagt 136  Q
    ||||||||||  |||||||||||||| || ||||||||||||| | |||  || |||||||||||| ||||    | |||||||||| |||||||| |||    
T  51674854 tttgtgaagcgccgatacttcaaaatagatgacgtatcgtatctcctgcatattctgcactgatacttgtccgatactttccgatatatatcagaaaagt 51674953  T
Q  137 at 138  Q
    ||    
T  51674954 at 51674955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 347
Target Start/End: Original strand, 28377282 - 28377338
Alignment:
Q  293 ttcttttttggat--atatagtatatgaataacaatgttccttttggatataatata 347  Q
    |||||||||||||  ||||||||||  | ||||||||||| ||||||||||||||||    
T  28377282 ttcttttttggatcgatatagtatagcactaacaatgttctttttggatataatata 28377338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 308
Target Start/End: Original strand, 41146349 - 41146385
Alignment:
Q  271 ttaactcttgagtactgatgtgttcttttttggatata 308  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  41146349 ttaactctt-agtactgatgtgttcttttttggatata 41146385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 43509706 - 43509649
Alignment:
Q  343 atataacactaatggtgctctttttgggatatattggatatgtaatcgactaatcacc 400  Q
    |||||| ||| |||||||||||||||| |||| |||  |||||||| |||||||||||    
T  43509706 atataatactgatggtgctctttttggtatattttgcgtatgtaattgactaatcacc 43509649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 308
Target Start/End: Original strand, 52572934 - 52572970
Alignment:
Q  271 ttaactcttgagtactgatgtgttcttttttggatata 308  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  52572934 ttaactctt-agtactgatgtgttcttttttggatata 52572970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 726545 - 726497
Alignment:
Q  172 aattatccgatacttcctgatacatatcaggagagtatctgatgattat 220  Q
    |||||||  |||||||||||||| ||||||||||||||| ||| |||||    
T  726545 aattatcatatacttcctgatacgtatcaggagagtatccgatcattat 726497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 396
Target Start/End: Complemental strand, 3402841 - 3402789
Alignment:
Q  344 tataacactaatggtgctctttttgggatatattggatatgtaatcgactaat 396  Q
    ||||||||| || ||||||||||||| ||||||||  |||||||| |||||||    
T  3402841 tataacacttattgtgctctttttggtatatattgcgtatgtaattgactaat 3402789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 396
Target Start/End: Complemental strand, 5325286 - 5325234
Alignment:
Q  344 tataacactaatggtgctctttttgggatatattggatatgtaatcgactaat 396  Q
    |||| |||| |||||||||||||||| ||||||||  |||||||| |||||||    
T  5325286 tatagcacttatggtgctctttttggtatatattgcgtatgtaattgactaat 5325234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 5835230 - 5835274
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataaca 350  Q
    ||||||||||  | ||||||||||||||||||||||| |||||||    
T  5835230 atatagtatagcattaacaatgttccttttggatatagtataaca 5835274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 10257698 - 10257738
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatc 82  Q
    ||||||||| ||||||||||||||||| || ||||||||||    
T  10257698 tgtgaagccccgatacttcaaaatggatgatgtatcgtatc 10257738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 400
Target Start/End: Original strand, 28377348 - 28377404
Alignment:
Q  344 tataacactaatggtgctctttttgggatatattggatatgtaatcgactaatcacc 400  Q
    ||||||||| |||||||||||||||  |||| |||  |||||||| |||||||||||    
T  28377348 tataacactgatggtgctctttttgttatattttgcgtatgtaattgactaatcacc 28377404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 31946324 - 31946268
Alignment:
Q  43 gtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcac 99  Q
    ||||||| ||||||||| |||||||| ||||||||||||  | |||| |||||||||    
T  31946324 gtgaagcttcgatactttaaaatggatgacgtatcgtattccctgcgtatcctgcac 31946268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 129; Significance: 1e-66; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 42 - 398
Target Start/End: Original strand, 26716271 - 26716630
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtat 138  Q
    ||||||||||||||||||||||||||| ||||||||||||| | |||| ||||| ||| ||||| || |    | || |||||| |||||||||||||||    
T  26716271 tgtgaagcctcgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctacaccgatacctgcctgatacttcccgatacgtatcagaagagtat 26716370  T
Q  139 ccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcc 238  Q
    || |||||||||||||||||||        |||  ||||||||||||||| ||||| ||||||||||||||| ||| ||||| ||||||| ||| |||||    
T  26716371 ccgaagattaaattttatttttttaaaaaataa--ttatccgatacttcccgatacgtatcaggagagtatccgataattatcctgcaccaatacctgcc 26716468  T
Q  239 tcgatatttctcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttt 334  Q
    || ||| ||| |||||||  ||| |||||||||||||||||||||||| |  ||  |||||||||||||  ||||||||||  | ||||||||||| |||    
T  26716469 tcaatacttcccaattaatgttagttaaaataacttaactcttgagta-tagtg-cttcttttttggatcgatatagtatagcactaacaatgttcattt 26716566  T
Q  335 tggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    |||||||| ||||||||  |||||||||||||||||||||||||  |||||||| |||||||||    
T  26716567 tggatatagtataacacctatggtgctctttttgggatatattgtgtatgtaattgactaatca 26716630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 42 - 398
Target Start/End: Original strand, 26986011 - 26986370
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtat 138  Q
    ||||||||||||||||||||||||||| ||||||||||||| | |||| ||||| ||| ||||| || |    | || |||||| |||||||||||||||    
T  26986011 tgtgaagcctcgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctacaccgatacctgcctgatacttcccgatacgtatcagaagagtat 26986110  T
Q  139 ccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcc 238  Q
    || |||||||||||||||||||        |||  ||||||||||||||| ||||| ||||||||||||||| ||| ||||| ||||||| ||| |||||    
T  26986111 ccgaagattaaattttatttttttaaaaaataa--ttatccgatacttcccgatacgtatcaggagagtatccgataattatcctgcaccaatacctgcc 26986208  T
Q  239 tcgatatttctcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttt 334  Q
    || ||| ||| |||||||  ||| |||||||||||||||||||||||| |  ||  |||||||||||||  ||||||||||  | ||||||||||| |||    
T  26986209 tcaatacttcccaattaatgttagttaaaataacttaactcttgagta-tagtg-cttcttttttggatcgatatagtatagcactaacaatgttcattt 26986306  T
Q  335 tggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    |||||||| ||||||||  |||||||||||||||||||||||||  |||||||| |||||||||    
T  26986307 tggatatagtataacacctatggtgctctttttgggatatattgtgtatgtaattgactaatca 26986370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 42 - 397
Target Start/End: Original strand, 1795390 - 1795750
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||  ||||||||||||| | | || ||||||||| ||||| || |    | ||||||||| |||||||||||||||    
T  1795390 tgtgaagccccgatacttcaaaatggttgacgtatcgtatcccctccgtatcctgcaccgatacctgcccgatactttccgatacgtatcagaagagtat 1795489  T
Q  139 ccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcc 238  Q
    || |||||||||||||||||||         | ||||||||||||||||| ||||| |||||| | |||||| ||| ||||| ||||||  ||| ||| |    
T  1795490 ccgaagattaaattttatttttttttaaaa-ataattatccgatacttcccgatacgtatcagaaaagtatccgataattatcctgcacatatacctgtc 1795588  T
Q  239 tcgatatttctcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttt 334  Q
       ||| ||| ||| |||  |||| |||||||||||||||||||||||  | ||  |||||||||||||  ||||||||||  | |||||||||| ||||    
T  1795589 caaataattcccaactaacgttaaataaaataacttaactcttgagtatag-tgc-ttcttttttggatcgatatagtatagcactaacaatgtttcttt 1795686  T
Q  335 tggatataatataacactaatggtgc-tctttttgggatatattggatatgtaatcgactaatc 397  Q
    |||||||| ||||||||| ||||||| | |||||||||||||||| ||||||||| ||||||||    
T  1795687 tggatatagtataacacttatggtgcttttttttgggatatattgtatatgtaattgactaatc 1795750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 42 - 301
Target Start/End: Complemental strand, 5612562 - 5612300
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtat 138  Q
    |||||||||  |||||||||||||||| ||||||||||||    || | |||||||| |||||  || |    | |||| |||| ||| ||| |||||||    
T  5612562 tgtgaagcccagatacttcaaaatggatgacgtatcgtattctctgtgcatcctgcattgataactgcccgatactttctgatacgtaccaggagagtat 5612463  T
Q  139 ccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcc 238  Q
    || |||||||||||||||||||        |||  ||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||| || |||||    
T  5612462 ccgaagattaaattttatttttttaaaaaataa--ttatccgatacttcctgatacgtatcaggagagtatctgataattatcctgcaccgctacctgcc 5612365  T
Q  239 tcgatatttctcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttctttttt 301  Q
     ||||| ||| |||||||  |||||||||||||||||||||| ||||| ||||||||||||||||    
T  5612364 ccgatagttcccaattaatgttaattaaaataacttaactctcgagtattgatgtgttctttttt 5612300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 45 - 308
Target Start/End: Complemental strand, 17138370 - 17138105
Alignment:
Q  45 gaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtatcca 141  Q
    |||||| |||||||||||||| || ||||||| ||||| | |||| ||||||||| ||||  || |    | || |||||| ||||||| ||| |||||     
T  17138370 gaagccccgatacttcaaaatagatgacgtat-gtatcccctgcgtatcctgcaccgataattgcctgatacttcccgatacgtatcaggagaatatccg 17138272  T
Q  142 aagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcg 241  Q
    |||||||||||||||||||        |||  ||||| ||||||||| ||||| ||||||||||||||| ||| ||||| |||||| ||||||||||  |    
T  17138271 aagattaaattttatttttttaaaaagtaa--ttatctgatacttcccgatacgtatcaggagagtatccgataattatcctgcactgatatctgccctg 17138174  T
Q  242 atatttctcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    ||||||| |||||||  |||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  17138173 atatttcccaattaatgttaactaaaataacttaactcttgagtattgatgtgttcttttttggatata 17138105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 124 - 396
Target Start/End: Original strand, 27938242 - 27938514
Alignment:
Q  124 gtatcagaagagtatccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattct 223  Q
    ||||||||||||||||| |||||||||||||||||||        |||  |||||||||||||||  |||| ||||||||||||||| ||| ||||| ||    
T  27938242 gtatcagaagagtatccgaagattaaattttatttttttaaaaaataa--ttatccgatacttcccaatacgtatcaggagagtatccgataattatcct 27938339  T
Q  224 gcaccgatatctgcctcgatatttctcaatta--attaattaaaataacttaactcttgagtactgatgtgttcttttttggat--atatagtatatgaa 319  Q
     |||| |||||| ||   ||| ||||||||||  |||||||||||||||||||||||| |||| |  ||  |||||||||||||  ||||||| ||  |     
T  27938340 acaccaatatctaccctaatacttctcaattaatattaattaaaataacttaactcttaagta-tagtg-cttcttttttggatcgatatagtgtagcac 27938437  T
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaat 396  Q
    ||||| ||||||||||||||||| |||| |||  |||||||||||||||||||||||||  |||||||| |||||||    
T  27938438 taacagtgttccttttggatatagtatagcacgtatggtgctctttttgggatatattgtgtatgtaattgactaat 27938514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 52 - 308
Target Start/End: Complemental strand, 30284717 - 30284456
Alignment:
Q  52 cgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtatccaaagatta 148  Q
    ||||||||||||||||| |||||| |||||| | |||| ||||||||| ||||| || |    | || |||||| ||||||| ||||||||| |||||||    
T  30284717 cgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcctgatacttcccgatacgtatcaggagagtatccgaagatta 30284618  T
Q  149 aattttatttttnnnnnnnntaaaattatccgatacttcctgataca--tatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatt 246  Q
    |||||||||||         |||  ||||||||||||||| ||||||  || |||||||||||   || |||||||||||||||||||||||  ||||||    
T  30284617 aattttattttaaaaaaaaataa--ttatccgatacttcccgatacacgtaccaggagagtattcaataattattctgcaccgatatctgccctgatatt 30284520  T
Q  247 tctcaattaat--taattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    || ||||||||  ||| |||||||||||||||| |||||| ||||||||||||||||| |||||    
T  30284519 tcccaattaatgttaactaaaataacttaactcctgagtagtgatgtgttcttttttgaatata 30284456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 117 - 398
Target Start/End: Complemental strand, 3934830 - 3934548
Alignment:
Q  117 ccgatatgtatcagaagagtatccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatga 216  Q
    |||||| ||||||| ||||||||| |||||||||||||||||||         | |||||||| |||||| | ||||| ||||| ||||||||| ||| |    
T  3934830 ccgatacgtatcaggagagtatccgaagattaaattttattttttaaaaata-ataattatccaatactttccgatacgtatcatgagagtatccgataa 3934732  T
Q  217 ttattctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataacttaactcttgagtactgatgtgttcttttttggat--atatagt 312  Q
    |||| ||||| ||||| ||||||  ||| ||| ||||||||  ||| ||||||||||||||||||||||| | |||  |||||||||||||  ||||| |    
T  3934731 ttatcctgcatcgatacctgcctaaatacttcccaattaatgttaactaaaataacttaactcttgagta-taatgc-ttcttttttggatcgatataat 3934634  T
Q  313 atatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    |||  | |||||||||| |||||||||||| ||||||||| ||| || |||||||| |||||||||  |||||||| |||||||||    
T  3934633 ataacactaacaatgtttcttttggatatagtataacacttatgatgatctttttgagatatattgtgtatgtaattgactaatca 3934548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 114 - 377
Target Start/End: Complemental strand, 43357804 - 43357540
Alignment:
Q  114 tttccgatatgtatcagaagagtatccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctga 213  Q
    ||||||||| |||| | |||||||||| |||||||||||||||||||        |||  ||||||||||||||| ||||| |||||||| |||||||||    
T  43357804 tttccgatacgtattaaaagagtatccgaagattaaattttatttttttaaaaaataa--ttatccgatacttcccgatacgtatcaggaaagtatctga 43357707  T
Q  214 tgattattctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttcttttttggat--atat 309  Q
    | ||||| ||||||| ||| ||||||| ||| ||| |||||||  |||| ||||||||||||||||||||||| |  ||  |||||||||| ||  ||||    
T  43357706 taattatcctgcacctatacctgcctcaataattcccaattaacgttaaataaaataacttaactcttgagta-tagtg-cttcttttttgaatcgatat 43357609  T
Q  310 agtatatgaataacaatgttccttttggatataatataacactaatggtgc-tctttttgggatatatt 377  Q
    ||||||  | |||||||||| |||||||||||| ||||  ||| ||||||| | |||||||||||||||    
T  43357608 agtatagcactaacaatgtttcttttggatatagtatagtacttatggtgcttttttttgggatatatt 43357540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 46 - 398
Target Start/End: Original strand, 26691618 - 26691996
Alignment:
Q  46 aagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtatccaa 142  Q
    ||||| |||||||||||||| || ||||||||||||| | |||| || |||||| ||||| ||||    | || |||||| ||||||  ||||||||| |    
T  26691618 aagccccgatacttcaaaatagatgacgtatcgtatcccctgcgtattctgcaccgatacctgtctgatacttcccgatacgtatcaagagagtatccga 26691717  T
Q  143 agattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcga 242  Q
    ||||||||||||||||||        |||  ||||||||||||||| ||||| |||||||| |||||  ||| ||||| |||||  |||||||||  |||    
T  26691718 agattaaattttattttttttaaaaataa--ttatccgatacttcccgatacgtatcaggatagtatgcgataattatcctgcattgatatctgctccga 26691815  T
Q  243 tatttctcaattaat--taattaaaataacttaactcttgagtactgatgtgtt---------------------cttttttggat--atatagtatatg 317  Q
    || ||| ||||||||  ||| ||||||||||||| | |||||||||||||||||                     |||||||||||  ||| ||||||      
T  26691816 tacttcccaattaatgttaactaaaataacttaagttttgagtactgatgtgttatttttttggatatagtgcttcttttttggatcgatagagtataac 26691915  T
Q  318 aataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    | ||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||  |||||||| |||||||||    
T  26691916 actaacaatgttccttttggatatagtataacattgatggtgctctttttgggatatattgtgtatgtaattgactaatca 26691996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 46 - 398
Target Start/End: Original strand, 26961350 - 26961728
Alignment:
Q  46 aagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtatccaa 142  Q
    ||||| |||||||||||||| || ||||||||||||| | |||| || |||||| ||||| ||||    | || |||||| ||||||  ||||||||| |    
T  26961350 aagccccgatacttcaaaatagatgacgtatcgtatcccctgcgtattctgcaccgatacctgtctgatacttcccgatacgtatcaagagagtatccga 26961449  T
Q  143 agattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcga 242  Q
    ||||||||||||||||||        |||  ||||||||||||||| ||||| |||||||| |||||  ||| ||||| |||||  |||||||||  |||    
T  26961450 agattaaattttattttttttaaaaataa--ttatccgatacttcccgatacgtatcaggatagtatgcgataattatcctgcattgatatctgctccga 26961547  T
Q  243 tatttctcaattaat--taattaaaataacttaactcttgagtactgatgtgtt---------------------cttttttggat--atatagtatatg 317  Q
    || ||| ||||||||  ||| ||||||||||||| | |||||||||||||||||                     |||||||||||  ||| ||||||      
T  26961548 tacttcccaattaatgttaactaaaataacttaagttttgagtactgatgtgttatttttttggatatagtgcttcttttttggatcgatagagtataac 26961647  T
Q  318 aataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    | ||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||  |||||||| |||||||||    
T  26961648 actaacaatgttccttttggatatagtataacattgatggtgctctttttgggatatattgtgtatgtaattgactaatca 26961728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 172 - 398
Target Start/End: Original strand, 25749735 - 25749963
Alignment:
Q  172 aattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataa 269  Q
    ||||||| ||||||| | ||||| ||||||||||||||| ||| ||||| ||||||| ||| ||||| | ||| ||| |||||||  |||||||||||||    
T  25749735 aattatctgatactttccgatacgtatcaggagagtatccgataattatcctgcaccaatacctgccccaatacttcccaattaatgttaattaaaataa 25749834  T
Q  270 cttaactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctcttttt 367  Q
    ||||||| ||||||| |  ||  |||||||||||||  || || ||||  | ||||||||||| ||||||||||| | || |||| ||||||||||||||    
T  25749835 cttaacttttgagta-tagtg-cttcttttttggatcgatgtaatatagcactaacaatgttcattttggatatagtgtagcacttatggtgctcttttt 25749932  T
Q  368 gggatatattggatatgtaatcgactaatca 398  Q
    | |||||||||  |||||||| |||||||||    
T  25749933 gagatatattgtgtatgtaattgactaatca 25749963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 180 - 308
Target Start/End: Original strand, 27085486 - 27085616
Alignment:
Q  180 gatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataacttaactc 277  Q
    |||||||||  |||| |||||| |||||||||||| ||||| ||| ||||||| || || ||||||||  ||||||||  ||| ||||||||||||||||    
T  27085486 gatacttcccaatacgtatcagaagagtatctgataattatcctgaaccgatagctcccccgatatttgccaattaatgttaactaaaataacttaactc 27085585  T
Q  278 ttgagtactgatgtgttcttttttggatata 308  Q
    |||||||||||||||||||||||||||||||    
T  27085586 ttgagtactgatgtgttcttttttggatata 27085616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 44 - 398
Target Start/End: Original strand, 7629070 - 7629403
Alignment:
Q  44 tgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtcaattttccgatatgtatcagaagagtatccaaa 143  Q
    |||||||  ||||| |||||||||| ||||||||||||| | |||| ||| || ||||||||        || |||||| ||||||| ||||||||  ||    
T  7629070 tgaagccctgatacctcaaaatggatgacgtatcgtatcccctgcgtatcttgtactgatac--------ttcccgatacgtatcaggagagtatctgaa 7629161  T
Q  144 gattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgat 243  Q
    ||||||||||||||||          ||||||||| ||||||||| |||||||||||| ||||||||||            |||||||| ||||| | ||    
T  7629162 gattaaattttattttgaaaaaa---aaaattatctgatacttcccgatacatatcagaagagtatctg------------caccgatacctgccccaat 7629246  T
Q  244 atttctcaattaat--taattaaaataacttaactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttttggat 339  Q
    | ||||||||||||  ||| ||||||| ||||||||||||||||  |||  |||||||||||||  ||||||||||  | |||||||||  |||||||||    
T  7629247 acttctcaattaatgttaactaaaatagcttaactcttgagtaca-atgc-ttcttttttggatcgatatagtatagcactaacaatgtatcttttggat 7629344  T
Q  340 ataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||| |||| |||||||| |||||||||||||||||||||  ||||| || |||||||||    
T  7629345 atagtatagcactaatgatgctctttttgggatatattgtgtatgtcattgactaatca 7629403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 179 - 300
Target Start/End: Original strand, 22737974 - 22738097
Alignment:
Q  179 cgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataacttaact 276  Q
    ||||| || ||||||| |||||| |||||||||||| ||||| |||||| |||| ||||||||||| |||||||||||  |||| |||||||| ||||||    
T  22737974 cgataatttctgatacgtatcagaagagtatctgataattatcctgcactgatacctgcctcgatacttctcaattaatgttaactaaaataatttaact 22738073  T
Q  277 cttgagtactgatgtgttcttttt 300  Q
    |||||| |||||||||||||||||    
T  22738074 cttgagcactgatgtgttcttttt 22738097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 172 - 305
Target Start/End: Original strand, 11694332 - 11694465
Alignment:
Q  172 aattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaat-taattaaaataac 270  Q
    ||||||| ||||||||| ||||| ||||| |||| |||||||| ||||| |||||||| || ||||| | ||| ||| |||||||| | | |||||||||    
T  11694332 aattatctgatacttcccgatacgtatcaagagaatatctgataattatcctgcaccgctacctgccccaatagttcccaattaatgttaataaaataac 11694431  T
Q  271 ttaactcttgagtactgatgtgttcttttttggat 305  Q
    ||||||||| |||||||||||||||||||||||||    
T  11694432 ttaactctt-agtactgatgtgttcttttttggat 11694465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 180 - 308
Target Start/End: Original strand, 41233447 - 41233573
Alignment:
Q  180 gatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataacttaactc 277  Q
    ||||||||| ||||| ||||||||||||||||||| |||||    || ||||| ||||| | ||||||| ||||||||  ||| |||||||||||||||     
T  41233447 gatacttcccgatacgtatcaggagagtatctgataattat----catcgatacctgccccaatatttcccaattaatgttaactaaaataacttaactg 41233542  T
Q  278 ttgagtactgatgtgttcttttttggatata 308  Q
    ||||||||| |||||||||||||||||||||    
T  41233543 ttgagtactaatgtgttcttttttggatata 41233573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 172 - 378
Target Start/End: Complemental strand, 42366096 - 42365882
Alignment:
Q  172 aattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataa 269  Q
    |||||||| |||||||| ||||  ||||||||||||||| ||| ||||| |||||||| || ||||||  ||| ||| |||||||  |||| | ||||||    
T  42366096 aattatccaatacttcccgatatgtatcaggagagtatccgataattatcctgcaccgttacctgcctaaatacttcccaattaatgttaactgaaataa 42365997  T
Q  270 cttaactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttttgga-----tataatataacactaatggtgctc 362  Q
    ||||||| ||||||| | |||  |  ||||||||||  ||||||||||| | ||| ||| |||||||||||     |||||||| ||||| |||||||||    
T  42365996 cttaacttttgagta-taatgcttctttttttggatcgatatagtatataactaagaatcttccttttggatatagtataatattacactcatggtgctc 42365898  T
Q  363 tttttgggatatattg 378  Q
    ||||||||||||||||    
T  42365897 tttttgggatatattg 42365882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 293 - 398
Target Start/End: Original strand, 15066463 - 15066570
Alignment:
Q  293 ttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcg 390  Q
    |||||||||||||  ||||||||||  | ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||  |||||||| |    
T  15066463 ttcttttttggatcaatatagtataacactaacaatgttcctttcggatatagtatagcactgatggtgctctttttgggatatattgtgtatgtaattg 15066562  T
Q  391 actaatca 398  Q
    ||||||||    
T  15066563 actaatca 15066570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 291 - 398
Target Start/End: Original strand, 21251732 - 21251841
Alignment:
Q  291 tgttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaat 388  Q
    |||||||||||||||  ||||||||||  | ||||||||||||||||||||||| |||| |||| |||||| |||||||| |||||||||  ||||||||    
T  21251732 tgttcttttttggatcgatatagtatagcattaacaatgttccttttggatatagtatagcactgatggtgttctttttgcgatatattgtgtatgtaat 21251831  T
Q  389 cgactaatca 398  Q
     |||||||||    
T  21251832 tgactaatca 21251841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 320 - 398
Target Start/End: Complemental strand, 39796783 - 39796705
Alignment:
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    |||||||||||||||| |||||| ||||||| | ||||||||||||||||||||||||| ||||||||| |||||||||    
T  39796783 taacaatgttccttttagatatagtataacattgatggtgctctttttgggatatattgtatatgtaattgactaatca 39796705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 321 - 400
Target Start/End: Original strand, 11907593 - 11907672
Alignment:
Q  321 aacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatcacc 400  Q
    |||||||| ||||||||||||| ||||||||| |||||||||||||||| ||||||||  |||||||| |||||||||||    
T  11907593 aacaatgtaccttttggatatagtataacactgatggtgctctttttggtatatattgtgtatgtaattgactaatcacc 11907672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 172 - 308
Target Start/End: Complemental strand, 18001954 - 18001817
Alignment:
Q  172 aattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataa 269  Q
    ||||||| ||||||| | ||||| ||||| ||||||||| ||| |||||  |||||||||| ||||  | ||||| ||||||||||  ||| ||||||||    
T  18001954 aattatctgatactttccgatacgtatcaagagagtatccgataattatcatgcaccgatacctgctccaatatt-ctcaattaatgttaactaaaataa 18001856  T
Q  270 cttaactcttgagtactgatgtgttcttttttggatata 308  Q
    ||||| | ||||||||||||||||||||||||| |||||    
T  18001855 cttaattattgagtactgatgtgttcttttttgaatata 18001817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 30777642 - 30777521
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| ||||||||||||| |||||| ||||||||| ||||| || |    | || |||||| ||||| | |||||||    
T  30777642 tgtgaagccccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtat 30777543  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  30777542 ccaaatattaaattttattttt 30777521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 293 - 398
Target Start/End: Original strand, 3701336 - 3701442
Alignment:
Q  293 ttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcg 390  Q
    |||||||||||||  ||||||||||  | ||||||||||||||||||||||| |||| |||| |||||||||||||| ||||||||||   ||||||| |    
T  3701336 ttcttttttggatcgatatagtataacactaacaatgttccttttggatatagtatagcactgatggtgctcttttt-ggatatattgtgcatgtaattg 3701434  T
Q  391 actaatca 398  Q
    ||||||||    
T  3701435 actaatca 3701442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 320 - 398
Target Start/End: Original strand, 5722278 - 5722356
Alignment:
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||||||  |||||||||||||||| |||| ||| |||||||||||| ||||||||  ||||||||||||||||||    
T  5722278 taacaatgtttattttggatataatatagcactgatgatgctctttttggtatatattgtgtatgtaatcgactaatca 5722356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 257 - 397
Target Start/End: Original strand, 14836548 - 14836689
Alignment:
Q  257 ttaattaaaataacttaactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataacactaa 354  Q
    |||| |||||||||||||||||||||||  | ||  |||||||||||||  ||||||||||| | |||||| ||| |||||||||||| ||||||||| |    
T  14836548 ttaaataaaataacttaactcttgagtatag-tgc-ttcttttttggatcgatatagtatatcactaacaaagtttcttttggatatagtataacactta 14836645  T
Q  355 tggtgctcttt-ttgggatatattggatatgtaatcgactaatc 397  Q
    ||||||| ||| ||| ||||||||   |||||||| ||||||||    
T  14836646 tggtgctttttattgagatatattttgtatgtaattgactaatc 14836689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 1639902 - 1639781
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| ||||||  ||||| | |||| ||||||||| ||||| || |    | || |||||| ||||| |||||||||    
T  1639902 tgtgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccgaagagtat 1639803  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  1639802 ccaaatattaaattttattttt 1639781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 303 - 398
Target Start/End: Complemental strand, 6242864 - 6242769
Alignment:
Q  303 gatatatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    |||||||||||||  | ||||||||||| ||||||||||| |||| |||  |||||||| ||||||| ||||||||  |||||||| |||||||||    
T  6242864 gatatatagtataacactaacaatgttctttttggatatagtatagcaccgatggtgctttttttggtatatattgtgtatgtaattgactaatca 6242769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 335 - 398
Target Start/End: Complemental strand, 18001780 - 18001717
Alignment:
Q  335 tggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    |||||||| |||| |||| ||||||||||||||||||||||||||||||||||| || ||||||    
T  18001780 tggatatagtatagcactgatggtgctctttttgggatatattggatatgtaattgattaatca 18001717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 32707951 - 32707830
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| |||||| |||||| | |||| ||||||||| ||||| || |    | || |||||| ||||| | |||||||    
T  32707951 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtat 32707852  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  32707851 ccaaatattaaattttattttt 32707830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 306 - 400
Target Start/End: Complemental strand, 30777241 - 30777147
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatcacc 400  Q
    ||||||||||  | ||||||||||| ||||| ||||| |||| |||| ||| |||||||||||| ||||||||  |||||||| |||||||||||    
T  30777241 atatagtataacactaacaatgttctttttgaatatagtatatcactgatgatgctctttttggtatatattgtgtatgtaattgactaatcacc 30777147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 26795113 - 26795003
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtcaattttccgatatgtatcagaagagtatcca 141  Q
    |||||||||  ||||||| |||||||| ||||||||||||| | |||| ||||||||| |||||        ||||||||| ||||| | ||||||||||    
T  26795113 tgtgaagccctgatactttaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatac--------tttccgatacgtatccggagagtatcca 26795022  T
Q  142 aagattaaattttattttt 160  Q
    || ||||||||||||||||    
T  26795021 aatattaaattttattttt 26795003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 160
Target Start/End: Original strand, 33829753 - 33829872
Alignment:
Q  44 tgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtatcc 140  Q
    ||||||| ||||||||||||||||| |||||| |||||| | |||| ||||||||| |||||||| |    | || |||||| ||||| | |||||||||    
T  33829753 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacatgcctgatacttcccgatacgtatccggagagtatcc 33829852  T
Q  141 aaagattaaattttattttt 160  Q
    ||| |||||||||| |||||    
T  33829853 aaatattaaatttttttttt 33829872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 188 - 308
Target Start/End: Original strand, 5722122 - 5722244
Alignment:
Q  188 ctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataacttaactcttgagtac 285  Q
    ||||||| |||||| |||||||  ||| ||||| || |||  |||  |||| ||||||||| ||||||||  | | ||||| ||||||||||||||||||    
T  5722122 ctgatacttatcagaagagtattcgataattatcctacacaaatacttgccccgatatttcccaattaatgttgactaaaaaaacttaactcttgagtac 5722221  T
Q  286 tgatgtgttcttttttggatata 308  Q
    | |||||||||||| ||||||||    
T  5722222 ttatgtgttcttttatggatata 5722244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 39690883 - 39690762
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| |||||| |||||| | |||| ||||||||| ||||| || |    | || | |||| ||||| | |||||||    
T  39690883 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatccggagagtat 39690784  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  39690783 ccaaatattaaattttattttt 39690762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 320 - 398
Target Start/End: Original strand, 9654029 - 9654107
Alignment:
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||| |||||| |||||||| |||||||  |||||||||||||||| |||||||||  |||| ||| |||||||||    
T  9654029 taacaatattccttatggatatattataacatcaatggtgctctttttgtgatatattgtgtatgcaattgactaatca 9654107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 320 - 377
Target Start/End: Original strand, 1921062 - 1921119
Alignment:
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggatatatt 377  Q
    |||||||| |||||||||||||| |||| |||| ||| ||||||||||||||||||||    
T  1921062 taacaatgatccttttggatatagtatatcactgatgatgctctttttgggatatatt 1921119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 12852117 - 12852227
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtcaattttccgatatgtatcagaagagtatcca 141  Q
    ||||||||| ||||||||||||||||| |||||| |||||| | |||| ||||||||| |||||        || | |||| ||||| | ||||||||||    
T  12852117 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatac--------ttcctgatacgtatccggagagtatcca 12852208  T
Q  142 aagattaaattttattttt 160  Q
    || ||||||||||||||||    
T  12852209 aatattaaattttattttt 12852227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 400
Target Start/End: Original strand, 10657296 - 10657352
Alignment:
Q  344 tataacactaatggtgctctttttgggatatattggatatgtaatcgactaatcacc 400  Q
    |||||||||||||||||||||||||| |||| |||  |||||||| |||||||||||    
T  10657296 tataacactaatggtgctctttttggtatattttgcgtatgtaattgactaatcacc 10657352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 105
Target Start/End: Original strand, 10656818 - 10656881
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatac 105  Q
    ||||||||| |||||||| |||||||| ||||||||||||| | |||| ||||||||| |||||    
T  10656818 tgtgaagccccgatactttaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatac 10656881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 46 - 160
Target Start/End: Original strand, 11906220 - 11906337
Alignment:
Q  46 aagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtatccaa 142  Q
    ||||||||||||||||||||||| ||||||| ||||  | |||| ||||||||| ||||  ||||    | || |||||| ||||| | ||||||||| |    
T  11906220 aagcctcgatacttcaaaatggatgacgtattgtattccctgcgtatcctgcaccgatatctgtccgatacttcccgatacgtatccggagagtatccga 11906319  T
Q  143 agattaaattttattttt 160  Q
    | ||||||||||||||||    
T  11906320 atattaaattttattttt 11906337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 257 - 308
Target Start/End: Original strand, 11907507 - 11907558
Alignment:
Q  257 ttaattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    |||| |||||||||||||||| ||||||||||||| ||||||||| ||||||    
T  11907507 ttaactaaaataacttaactcctgagtactgatgtattctttttttgatata 11907558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 105
Target Start/End: Original strand, 30918376 - 30918439
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatac 105  Q
    ||||||||| ||||||||||||||||| ||||||| ||||| | |||| ||||||||| |||||    
T  30918376 tgtgaagccccgatacttcaaaatggatgacgtattgtatcccctgcgtatcctgcaccgatac 30918439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 53 - 159
Target Start/End: Complemental strand, 41392821 - 41392712
Alignment:
Q  53 gatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtatccaaagattaa 149  Q
    |||||||||||||||| |||||| |||||| | |||| ||||||||| ||||| || |    | || |||||||||||| |  ||||||||||| |||||    
T  41392821 gatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatatgtatccggggagtatccaaatattaa 41392722  T
Q  150 attttatttt 159  Q
    ||||||||||    
T  41392721 attttatttt 41392712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 306 - 376
Target Start/End: Complemental strand, 9729467 - 9729397
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatat 376  Q
    ||||||||||  | ||||||||||||||||||||||| |   ||||| ||||||||||||||| |||||||    
T  9729467 atatagtatagcattaacaatgttccttttggatatactgcgacactgatggtgctctttttgagatatat 9729397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 320 - 378
Target Start/End: Complemental strand, 17138071 - 17138014
Alignment:
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggatatattg 378  Q
    ||||||||||||||||| |||||||||| || | ||||||||| |||||||||||||||    
T  17138071 taacaatgttccttttgcatataatatagcattgatggtgctc-ttttgggatatattg 17138014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 117 - 159
Target Start/End: Original strand, 19321449 - 19321491
Alignment:
Q  117 ccgatatgtatcagaagagtatccaaagattaaattttatttt 159  Q
    ||||| |||||||||||||||||| ||||||||||||||||||    
T  19321449 ccgatgtgtatcagaagagtatccgaagattaaattttatttt 19321491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 336 - 398
Target Start/End: Original strand, 34032667 - 34032729
Alignment:
Q  336 ggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||| |||| |||| |||||||||||||||||||||||||  |||||||| || ||||||    
T  34032667 ggatatagtatagcactgatggtgctctttttgggatatattgtgtatgtaattgattaatca 34032729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 396
Target Start/End: Original strand, 9793147 - 9793199
Alignment:
Q  344 tataacactaatggtgctctttttgggatatattggatatgtaatcgactaat 396  Q
    ||||||||| |||||||||||||||| ||||||||  |||||||| |||||||    
T  9793147 tataacactgatggtgctctttttggtatatattgcgtatgtaattgactaat 9793199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 53 - 160
Target Start/End: Original strand, 14836390 - 14836500
Alignment:
Q  53 gatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtatccaaagattaa 149  Q
    |||||||||||||||  ||||||| ||||| | |||| ||||||||  ||||  ||||    ||||||||||| ||||||||||||||||| || |||||    
T  14836390 gatacttcaaaatggttgacgtattgtatcccctgcgtatcctgcatcgatatttgtccgatattttccgatacgtatcagaagagtatccgaatattaa 14836489  T
Q  150 attttattttt 160  Q
     |||| |||||    
T  14836490 ttttttttttt 14836500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 320 - 396
Target Start/End: Original strand, 27085650 - 27085725
Alignment:
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaat 396  Q
    ||||||||||| ||||| ||||| |||| ||||  ||||||||||||| ||||||||||  |||||||| |||||||    
T  27085650 taacaatgttcattttgaatatagtatagcactcgtggtgctcttttt-ggatatattgtgtatgtaattgactaat 27085725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 308
Target Start/End: Complemental strand, 30777312 - 30777261
Alignment:
Q  257 ttaattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    |||| |||||||| |||||||||||||| | |||||||||||||| ||||||    
T  30777312 ttaactaaaataatttaactcttgagtaattatgtgttctttttttgatata 30777261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 301
Target Start/End: Original strand, 34032521 - 34032622
Alignment:
Q  204 gagtatctgatgattattctgcaccgatatctgcctcgatatttctcaat--taat--taattaaaataacttaactcttgagtactgatgtgttctttt 299  Q
    ||||||| ||| ||||||||||| ||||| || || ||||||||  ||||  ||||  ||| |||||||| |||||| ||||||||| ||||||||||||    
T  34032521 gagtatccgataattattctgcatcgatacctaccccgatattttccaatattaatgttaactaaaataatttaacttttgagtactaatgtgttctttt 34032620  T
Q  300 tt 301  Q
    ||    
T  34032621 tt 34032622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 42 - 108
Target Start/End: Original strand, 5721986 - 5722051
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatg 108  Q
    ||||||||| ||||| || ||||| || ||||||||||||| | |||| ||||||||||||||||||    
T  5721986 tgtgaagcc-cgatattttaaaattgatgacgtatcgtatcccctgcgtatcctgcactgatacatg 5722051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 400
Target Start/End: Complemental strand, 5985745 - 5985689
Alignment:
Q  344 tataacactaatggtgctctttttgggatatattggatatgtaatcgactaatcacc 400  Q
    ||||||||| ||| |||||||||||| |||| |||  |||||||| |||||||||||    
T  5985745 tataacactgatgatgctctttttggtatattttgcgtatgtaattgactaatcacc 5985689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 306 - 350
Target Start/End: Original strand, 22738124 - 22738168
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataaca 350  Q
    ||||||||||  | ||||||||||||||||||||||| |||||||    
T  22738124 atatagtataacactaacaatgttccttttggatatagtataaca 22738168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 27938171 - 27938227
Alignment:
Q  52 cgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatg 108  Q
    ||||||||||||||||| ||||||| ||||| | |||| ||| ||||| ||||||||    
T  27938171 cgatacttcaaaatggatgacgtattgtatctcatgcgtatcatgcaccgatacatg 27938227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 396
Target Start/End: Original strand, 30918995 - 30919047
Alignment:
Q  344 tataacactaatggtgctctttttgggatatattggatatgtaatcgactaat 396  Q
    ||||||||| ||| |||||||||||| ||||||||  |||||||| |||||||    
T  30918995 tataacactgatgatgctctttttggtatatattgcgtatgtaattgactaat 30919047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 398
Target Start/End: Original strand, 41233614 - 41233674
Alignment:
Q  338 atataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    |||||||||| ||||  || |||||||||||| |||||| | ||||||||| |||||||||    
T  41233614 atataatatagcactcctgatgctctttttggtatatatcgtatatgtaattgactaatca 41233674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 1e-63; HSPs: 49)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 53 - 398
Target Start/End: Original strand, 1005522 - 1005869
Alignment:
Q  53 gatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtcaat--tttccgatatgtatcagaagagtatccaaagattaaa 150  Q
    |||||||||||||||| ||||||||||||| | |||| ||||||||| ||||| |||| ||  || |||||| |||| |||||||||||  |||||||||    
T  1005522 gatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgtcgatacttcccgatacgtattagaagagtatctgaagattaaa 1005621  T
Q  151 ttttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctc 250  Q
    |||||||| |        |||  ||||| ||||||||||||||| |||||| |||||||||||| ||||| ||||||| ||||||||| | ||| ||| |    
T  1005622 ttttatttattttttaaataa--ttatctgatacttcctgatacgtatcagaagagtatctgataattatcctgcaccaatatctgccccaatacttccc 1005719  T
Q  251 aattaa--ttaattaaaataacttaactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttttggatataatat 346  Q
    ||||||  |||||||||||||||||||||||||||| |  ||| |||||||||||||  ||||||||||  | ||||||| ||||||||||||||| |||    
T  1005720 aattaatgttaattaaaataacttaactcttgagta-tagtgt-ttcttttttggatcgatatagtataacactaacaatattccttttggatatagtat 1005817  T
Q  347 aacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    | |||| |||||||||||||| ||||||||||  |||||||| |||||||||    
T  1005818 agcacttatggtgctctttttaggatatattgtgtatgtaattgactaatca 1005869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 52 - 378
Target Start/End: Complemental strand, 8483027 - 8482698
Alignment:
Q  52 cgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtatccaaagatta 148  Q
    ||||||||||||||| | |||||||||||||  ||||| ||||||||| ||||  ||||    | ||||||||| ||||||||||||||||| |||||||    
T  8483027 cgatacttcaaaatgaatgacgtatcgtatcctttgcgtatcctgcaccgatatctgtctgatactttccgatacgtatcagaagagtatccgaagatta 8482928  T
Q  149 aattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttc 248  Q
    ||||||||||||        |||  ||||||||||||||  |||||||||||| |||| ||| ||| ||||| ||||||||||| ||||||| ||| |||    
T  8482927 aattttatttttttaaaaaataa--ttatccgatacttcgcgatacatatcagaagagcatccgataattatcctgcaccgatacctgcctcaatacttc 8482830  T
Q  249 tcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttttggatataat 344  Q
     |||| ||  |||||||||||||||||||||||||||| | |||  |||||||||||||  ||||| ||||  | ||||||||||||||||||||||| |    
T  8482829 ccaatcaatgttaattaaaataacttaactcttgagta-taatg-cttcttttttggatcgatataatataacattaacaatgttccttttggatatagt 8482732  T
Q  345 ataacactaatggtgctctttttgggatatattg 378  Q
    ||| |||  ||||||||| |||||||||||||||    
T  8482731 atagcaccgatggtgctcgttttgggatatattg 8482698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 42 - 398
Target Start/End: Original strand, 14824146 - 14824496
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtcaattttccgatatgtatcagaagagtatcca 141  Q
    ||||||| | |||||||||||||| || ||||||||||||| |||||| ||| ||||| ||||  ||||        |||| |||||||||||||||||     
T  14824146 tgtgaagtcccgatacttcaaaatagatgacgtatcgtatctcttgcgtatcatgcaccgatatctgtct-------gatacgtatcagaagagtatccg 14824238  T
Q  142 aagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcg 241  Q
    ||||||||||||||||||          | |||||||||||| |||| ||||| ||||||||||||||| ||| ||||| ||||||| ||| || || |     
T  14824239 aagattaaattttattttaaaaaaaaa-ataattatccgatatttcccgatacgtatcaggagagtatccgataattatcctgcaccaataccttcccca 14824337  T
Q  242 atatttctcaattaat--taattaaaataacttaactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttttgg 337  Q
    ||| ||| ||||||||  ||||||||||||||||||||||||||| | |||  |||||||||||||  ||||||||||  | ||||||||||| ||||||    
T  14824338 atacttcccaattaatgttaattaaaataacttaactcttgagta-taatgc-ttcttttttggatcgatatagtatagcactaacaatgttctttttgg 14824435  T
Q  338 atataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||| |||| |||| |||||||||||||||||||||||||  |||||||| |||||||||    
T  14824436 atatagtatagcacttatggtgctctttttgggatatattgtgtatgtaattgactaatca 14824496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 54 - 398
Target Start/End: Original strand, 4561798 - 4562146
Alignment:
Q  54 atacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtatccaaagattaaa 150  Q
    ||||||||||||||| ||||||||||||  |||| | ||||||||| ||||| || |    | || ||||||  |||||||||||||||| |||||||||    
T  4561798 atacttcaaaatggatgacgtatcgtattccttgtgtatcctgcaccgatacctgcccgatacttcccgatacatatcagaagagtatccgaagattaaa 4561897  T
Q  151 ttttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctc 250  Q
    ||||||||||         | ||||||| ||||||||| ||||| ||||||||||||||| ||| |||||  |||||| ||| ||| | | ||| ||| |    
T  4561898 ttttatttttttaaaaaa-ataattatctgatacttcccgatacgtatcaggagagtatccgataattatcatgcaccaatacctgtcccaatacttccc 4561996  T
Q  251 aattaat--taattaaaataacttaactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttttggatataatat 346  Q
    |||||||  || ||||||||||||||||||||||||  | ||  |||||||||||||  ||||||||||| | ||||||||||||||||||||||| |||    
T  4561997 aattaatgttacttaaaataacttaactcttgagtatag-tgc-ttcttttttggattgatatagtatatcactaacaatgttccttttggatatagtat 4562094  T
Q  347 aacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    |  ||| ||||| |||||||||||||||||||  |||||||| |||||||||    
T  4562095 agtacttatggtactctttttgggatatattgtgtatgtaattgactaatca 4562146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 117 - 308
Target Start/End: Original strand, 34146256 - 34146447
Alignment:
Q  117 ccgatatgtatcagaagagtatccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatga 216  Q
    |||||| ||||||| |||||||||||||||||||||||||||||        |||  ||||||||||||||||||||| ||||||||||||||| ||| |    
T  34146256 ccgatacgtatcaggagagtatccaaagattaaattttatttttaaaaaaaataa--ttatccgatacttcctgatacgtatcaggagagtatccgataa 34146353  T
Q  217 ttattctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    ||||||||||| |||||||||| ||||| ||| |||||||  |||| |||||||| |||||||||||||| |||| ||||||||||||||||||    
T  34146354 ttattctgcactgatatctgccccgatacttcccaattaatgttaactaaaataatttaactcttgagtattgatttgttcttttttggatata 34146447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 52 - 398
Target Start/End: Original strand, 44156605 - 44156954
Alignment:
Q  52 cgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtatccaaagatta 148  Q
    ||||||||||||||||| ||| ||||||||| | |||| ||| ||||  ||||||||||    | || |||||| ||||||| ||||||||| |||||||    
T  44156605 cgatacttcaaaatggatgacatatcgtatcccctgcgtatcatgcatcgatacatgtctgatacttcccgatacgtatcaggagagtatccgaagatta 44156704  T
Q  149 aattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttc 248  Q
    ||||||||||||         | ||||||||||||||||||||||| ||||||||  ||||| ||| ||||| ||||||||||| ||| | | ||| |||    
T  44156705 aattttattttttttaaaaa-ataattatccgatacttcctgatacgtatcaggatggtatccgataattatcctgcaccgatacctgacccaatacttc 44156803  T
Q  249 tcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttttggatataat 344  Q
     |||||||  |||| ||||||||||||||||||||||| | |||  |||||||||||||  ||||| ||||  | |||||||||| ||| |||||||| |    
T  44156804 ccaattaatgttaactaaaataacttaactcttgagta-taatg-cttcttttttggatcgatataatatagaactaacaatgtttcttctggatatagt 44156901  T
Q  345 ataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||||  |||||||||||||||| ||| |||  |||||||| |||||||||    
T  44156902 ataacacttgtggtgctctttttggg-tatgttgtgtatgtaattgactaatca 44156954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 42 - 308
Target Start/End: Complemental strand, 31236306 - 31236037
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatg--tca-attttccgatatgtatcagaagagtat 138  Q
    ||||||||| |||||||| ||||||||  |||||| ||||| | |||| |||||||||  | || ||  | | |||| |||||| ||||||| |||||||    
T  31236306 tgtgaagccccgatactttaaaatggataacgtattgtatcccctgcgtatcctgcacccacacctgcatgatatttcccgatacgtatcaggagagtat 31236207  T
Q  139 ccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcc 238  Q
    || |||||||||||||| ||||        |||  | | ||||||||||| ||||| ||||||||||||||||||| ||||| || || |||||||||||    
T  31236206 ccgaagattaaattttaattttttaaaaaataa--tcagccgatacttcccgatacgtatcaggagagtatctgataattatcctacatcgatatctgcc 31236109  T
Q  239 tcgatatttctcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    |||||||||| || | ||  |||| |||||||||||||||||| |||||||||||||| |||||||||||||    
T  31236108 tcgatatttcacagtaaatgttaactaaaataacttaactcttcagtactgatgtgtttttttttggatata 31236037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 52 - 301
Target Start/End: Original strand, 35342325 - 35342578
Alignment:
Q  52 cgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtatccaaagatta 148  Q
    ||||||||||||||||| |||||| |||||| |||||| ||||||||| ||||| |  |    | || |||||| |||||| |||||||||| |||||||    
T  35342325 cgatacttcaaaatggatgacgtaccgtatcccttgcgtatcctgcaccgatacctacctgatacttcccgatacgtatcaaaagagtatccgaagatta 35342424  T
Q  149 aattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttc 248  Q
    ||||||||||||         | ||||||| ||||||||| ||||| ||||||||||||||| ||| ||||| || ||| | ||||||||  |||| |||    
T  35342425 aattttatttttaaaaaaaa-ataattatctgatacttcccgatacgtatcaggagagtatccgatcattatcctacacaggtatctgccctgatacttc 35342523  T
Q  249 tcaattaat--taattaaaataacttaactcttgagtactgatgtgttctttttt 301  Q
     ||||||||  ||| |||||||||||||||||||| |||||||||||||||||||    
T  35342524 ccaattaatgttaactaaaataacttaactcttgattactgatgtgttctttttt 35342578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 45 - 308
Target Start/End: Complemental strand, 3545698 - 3545431
Alignment:
Q  45 gaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtatcca 141  Q
    ||||| |||||||||||||||||| |||||||||||||  || || || |||||| ||||| ||||    | ||  ||||||||||||| |||| ||||     
T  3545698 gaagcttcgatacttcaaaatggatgacgtatcgtatcttttacgtattctgcaccgatacttgtctgatacttctcgatatgtatcaggagagcatccg 3545599  T
Q  142 aagattaaattttatttttnnnnnnnntaa-aattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctc 240  Q
    ||||||||||||||||||         ||| ||||||| ||| ||||| ||||||||||| ||||||||||||| |||||  ||||| ||||||| || |    
T  3545598 aagattaaattttatttt--aaaaaaataataattatcagatgcttcccgatacatatcaagagagtatctgataattatcatgcactgatatcttcccc 3545501  T
Q  241 gatatttctcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
     | | |||  ||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  3545500 aaaacttcctaattaatgttaattaaaataacttaattcttgagtactgatgtgttcttttttggatata 3545431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 32 - 284
Target Start/End: Complemental strand, 1776566 - 1776311
Alignment:
Q  32 tgaaatcatttgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca-at--tttccgatatgtatc 128  Q
    ||||||||  ||||||||| ||||||||||||||||  ||||||||||||| |||||| || |||||| ||||| || |  ||  ||||||||| |||||    
T  1776566 tgaaatcacctgtgaagccccgatacttcaaaatggttgacgtatcgtatcccttgcgtattctgcaccgatacctgcccgatcatttccgatacgtatc 1776467  T
Q  129 agaagagtatccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcacc 228  Q
    |||||||||||| |||||||||||||||||||         ||||| || |||||||||| ||||| |||||| | |||||||||| ||||| |||||||    
T  1776466 agaagagtatccgaagattaaattttattttttaaaaaa--aaaatcattcgatacttcccgatacgtatcagaaaagtatctgataattatcctgcacc 1776369  T
Q  229 gatatctgcctcgatatttctcaattaa--ttaattaaaataacttaactcttgagta 284  Q
     ||| ||||| | ||| ||  |||||||  |||| |||||||||||||||||||||||    
T  1776368 tatacctgccccaataatttccaattaacattaaataaaataacttaactcttgagta 1776311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 44 - 398
Target Start/End: Original strand, 3563851 - 3564197
Alignment:
Q  44 tgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtcaattttccgatatgtatcagaagagtatccaaa 143  Q
    ||||||| ||||||||||||||||| ||||||| ||||| | | |  || ||||||||||||        || |||||| ||||||| ||||||||| ||    
T  3563851 tgaagccccgatacttcaaaatggatgacgtattgtatcccctacatattctgcactgatac--------ttcccgatacgtatcaggagagtatccgaa 3563942  T
Q  144 gattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgat 243  Q
    ||||||||||||||| |        |||  ||||| ||||||||| ||||| |||||| |||||||| ||| ||||| ||||| ||||| ||||| | ||    
T  3563943 gattaaattttatttctttaaaaaataa--ttatctgatacttcccgatacgtatcagaagagtatccgataattatcctgcatcgatacctgccacaat 3564040  T
Q  244 atttctcaattaat--taattaaaataacttaactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttttggat 339  Q
    | ||| ||||||||  ||| ||||||||||||||||||||||| |  ||   ||||||||||||   |||||||||  | |||||||| | |||||||||    
T  3564041 acttcccaattaatgttaagtaaaataacttaactcttgagta-tagtg-actcttttttggatcattatagtatagcattaacaatgcttcttttggat 3564138  T
Q  340 ataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||| ||||||| | ||| |||||||||||||||||||||  |||| ||| |||||||||    
T  3564139 atagtataacagttatgatgctctttttgggatatattgtgtatgcaattgactaatca 3564197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 42 - 397
Target Start/End: Complemental strand, 28746772 - 28746422
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||  ||||||||||||| | |||| ||||||||| ||||| || |    | ||| ||||| |||||||||||||||    
T  28746772 tgtgaagccccgatacttcaaaatggttgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttttcgatacgtatcagaagagtat 28746673  T
Q  139 ccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcc 238  Q
    || |||||||| |||| |||||         | ||||||||||||||||| ||||| ||||| || |||||| ||| ||||     |||| ||| |||||    
T  28746672 ccgaagattaattttttttttttaa------ataattatccgatacttcccgatacgtatcaagaaagtatccgataatta-----cacctatacctgcc 28746584  T
Q  239 tcgatatttctcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttt 334  Q
     | ||| ||| |||||||  |||| |||||||||||||||||||| ||  | | |  ||||||||||||  ||||||||||  |||||||||||| ||||    
T  28746583 ccaataattcccaattaacgttaaataaaataacttaactcttgaatatagttct--tcttttttggatcgatatagtataacaataacaatgtttcttt 28746486  T
Q  335 tggatataatataacactaatggtgc-tctttttgggatatattggatatgtaatcgactaatc 397  Q
    |||||||| |||| |||| ||||||| | ||||| ||||||||||  |||||||| ||||||||    
T  28746485 tggatatagtatagcacttatggtgctttttttttggatatattgtgtatgtaattgactaatc 28746422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 43 - 308
Target Start/End: Original strand, 2319274 - 2319542
Alignment:
Q  43 gtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatg--tcaattttcc-gatatgtatcagaagagtatc 139  Q
    ||||| || ||||||||||||||||| ||||||||||||| | |||| ||| ||||| ||||| ||  | |   |||| |||| ||||||||||||||||    
T  2319274 gtgaaaccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcttgcaccgatacttgcttgatacttcctgatacgtatcagaagagtatc 2319373  T
Q  140 caaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcct 239  Q
    | |||||||||||||||||||        |||  ||||||||||| ||| ||||| ||||||||||||||| ||| ||||| ||| |  ||||||||||     
T  2319374 cgaagattaaattttatttttttaaaaaataa--ttatccgatacgtcccgatacgtatcaggagagtatccgataattatcctggattgatatctgccc 2319471  T
Q  240 cgatatttctcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
     |||| ||| |||||||  |||| ||||||||||||||| |||||||||||||  || |||| ||||||||    
T  2319472 tgatacttcccaattaatgttaactaaaataacttaactattgagtactgatgcatttttttatggatata 2319542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 44 - 397
Target Start/End: Original strand, 24585530 - 24585892
Alignment:
Q  44 tgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtatcc 140  Q
    ||||||| ||||||||||||||||| || |||||||||| || ||| ||||||||| ||||| ||||    | || | |||| ||||||| || ||||||    
T  24585530 tgaagccccgatacttcaaaatggatgatgtatcgtatccct-gcgtatcctgcaccgatacctgtctgatacttccagatacgtatcaggagtgtatcc 24585628  T
Q  141 aaagattaaattttatttttnnnnnnnntaaa---attatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgc 237  Q
    ||||||||| |||| |||||         |||   ||||||| ||| ||| |||||| ||||||||||||||  ||| ||||| ||||||  ||| ||||    
T  24585629 aaagattaattttttttttttattttttaaaagtaattatccaatatttcttgatacgtatcaggagagtattcgataattatcctgcactaatacctgc 24585728  T
Q  238 ctcgatatttctcaattaat---taattaaaataacttaactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttcct 332  Q
    |   ||| ||| ||||||||   ||| |||||||||||||||||||||||  | ||  |||||||||||||  ||||||||||  | |||||||||| ||    
T  24585729 cctaatacttcccaattaatgtttaactaaaataacttaactcttgagtatag-tga-ttcttttttggatcgatatagtatagcactaacaatgtttct 24585826  T
Q  333 ttt-ggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatc 397  Q
    ||| ||||||| |||| |||| ||||| ||||||||||||||||||   |||||||| ||||||||    
T  24585827 ttttggatatagtatagcacttatggtactctttttgggatatattctgtatgtaattgactaatc 24585892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 172 - 308
Target Start/End: Original strand, 10573623 - 10573761
Alignment:
Q  172 aattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataa 269  Q
    |||||| | ||||||||  |||| |||| |||||||||| ||| ||||||||||| |||||  || | ||||||||||||||||||  |||  |||||||    
T  10573623 aattattcaatacttccatatacgtatctggagagtatccgataattattctgcatcgatacatgtcccgatatttctcaattaatgttaaccaaaataa 10573722  T
Q  270 cttaactcttgagtactgatgtgttcttttttggatata 308  Q
    ||||||| ||||||| |||||||||||||||||||||||    
T  10573723 cttaactattgagtagtgatgtgttcttttttggatata 10573761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 44 - 301
Target Start/End: Original strand, 21104482 - 21104742
Alignment:
Q  44 tgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtatcc 140  Q
    ||||||| | |||||| |||||||| |||||||||||||   |||| ||| ||||| ||||  ||||    |||| |||||| |||||| | ||||||||    
T  21104482 tgaagccccaatactttaaaatggatgacgtatcgtatcctctgcgtatcttgcaccgatatctgtctgatatttcccgatacgtatcaaaggagtatcc 21104581  T
Q  141 aaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctc 240  Q
     ||||||||||| || ||||        |||  |||||||||| ||||  |||| |||||||| |||||| ||| ||||| || |||||||||||||| |    
T  21104582 gaagattaaattatactttttttaaaaataa--ttatccgatatttccctatacgtatcaggaaagtatccgatcattatcctacaccgatatctgcccc 21104679  T
Q  241 gatatttctcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttctttttt 301  Q
    |||| ||| |||||||  |||| ||||||||||||||| ||||||| |||||||| |||||||    
T  21104680 gatacttcccaattaatgttaactaaaataacttaacttttgagtattgatgtgtactttttt 21104742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 185 - 395
Target Start/End: Complemental strand, 40431997 - 40431786
Alignment:
Q  185 ttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataacttaactcttgag 282  Q
    |||||||||| |||||||| |||||| ||| ||||| |||||||| || ||||| | ||| || |||||||||  | | ||||||||||||||| |||||    
T  40431997 ttcctgatacgtatcaggacagtatccgataattatcctgcaccgttacctgccccaatacttttcaattaatgtttactaaaataacttaactattgag 40431898  T
Q  283 tactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattgga 380  Q
    ||  |   || || |||||  ||  ||||||||||  | ||||||||||||||||||||||| ||||||||  |||||||||||||| |||||| |||      
T  40431897 tatag---tgctcctttttttatcgatatagtataacactaacaatgttccttttggatatagtataacaccgatggtgctctttttaggatattttgtg 40431801  T
Q  381 tatgtaatcgactaa 395  Q
    |||||||| ||||||    
T  40431800 tatgtaattgactaa 40431786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 44 - 398
Target Start/End: Original strand, 4355325 - 4355669
Alignment:
Q  44 tgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatg--tca-attttccgatatgtatcagaagagtatcc 140  Q
    ||||||||||||||||||||||||| ||||||||||||  | |||| || |||||| ||||| ||  | | | || |||||| ||||||| ||||||| |    
T  4355325 tgaagcctcgatacttcaaaatggatgacgtatcgtattccctgcgtattctgcaccgatacctgcttgatacttcccgatacgtatcaggagagtatgc 4355424  T
Q  141 aaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctc 240  Q
    ||||||||||||||||||||        |||  ||||||||||||||| ||||| |             | ||| ||||| || ||| |||| ||||| |    
T  4355425 aaagattaaattttattttttaaaaaactaa--ttatccgatacttcccgatacgt-------------ccgataattatcctacactgatacctgcccc 4355509  T
Q  241 gatatttctcaattaat--taattaaaataacttaactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttttg 336  Q
     ||| ||| ||||||||  ||| ||||||||||||||||||||| |  | ||  |||||||||||||  ||||||||||  | |||||||||| ||||||    
T  4355510 aatacttcccaattaatgttaactaaaataacttaactcttgagaatag-tgc-ttcttttttggatcgatatagtataacactaacaatgtttcttttg 4355607  T
Q  337 gatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    |||||| |||| |||| |||| |||||||||||||||||||   |||||||| |||||||||    
T  4355608 gatatagtatagcacttatggggctctttttgggatatattatgtatgtaattgactaatca 4355669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 188 - 302
Target Start/End: Original strand, 9293250 - 9293366
Alignment:
Q  188 ctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataacttaactcttgagtac 285  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||| | ||| | | ||||  |||||||  |||| |||||||||| |||| ||||||||    
T  9293250 ctgatacgtatcaggagagtatctgatcattattctgcaccgatacccgccccaagattttccaattaatgttaactaaaataactcaactattgagtac 9293349  T
Q  286 tgatgtgttcttttttg 302  Q
     ||||||||||||||||    
T  9293350 cgatgtgttcttttttg 9293366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 322 - 398
Target Start/End: Original strand, 40536498 - 40536574
Alignment:
Q  322 acaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||||||||||||||||| ||||||| | |||||||||||||||| |||||||| ||||||||| |||||||||    
T  40536498 acaatgttccttttggatatagtataacattgatggtgctctttttggaatatattgtatatgtaattgactaatca 40536574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 181 - 398
Target Start/End: Original strand, 5588176 - 5588395
Alignment:
Q  181 atacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataacttaactct 278  Q
    |||||||||||||||||||| |||||||||  || ||||| || |||||||| ||||| | | | ||| |||||||  |||| |||||||||||||||||    
T  5588176 atacttcctgatacatatcatgagagtatccaataattatcctacaccgatacctgccccaacacttcccaattaatgttaactaaaataacttaactct 5588275  T
Q  279 tgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatat 376  Q
    || ||| |  ||  || ||||||||||  ||||| ||||  | |||||||||| |||||| ||| | |||| |||| |||||||||| || |||||||||    
T  5588276 tgcgta-tagtg-cttattttttggatcgatataatataacactaacaatgtttcttttgcatacagtatatcacttatggtgctctcttcgggatatat 5588373  T
Q  377 tggatatgtaatcgactaatca 398  Q
    ||  |||||||| |||||||||    
T  5588374 tgtgtatgtaattgactaatca 5588395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 306 - 388
Target Start/End: Original strand, 35342604 - 35342686
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaat 388  Q
    ||||||||||  | ||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||  ||||||||    
T  35342604 atatagtataacactaacaatgttccttttggatataatataacactgatgatgctctttttaggatatattgtgtatgtaat 35342686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 52 - 282
Target Start/End: Complemental strand, 14217264 - 14217027
Alignment:
Q  52 cgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtatccaaagatta 148  Q
    ||||||||||||||||| ||||||| ||||| | |||| || |||||| ||||  |||     | ||||||||| ||||| | |||||||| ||||||||    
T  14217264 cgatacttcaaaatggatgacgtattgtatcccctgcgtattctgcaccgatatctgtttgatactttccgatacgtatctggagagtatctaaagatta 14217165  T
Q  149 aattttatttttnnnnnnnntaaa--attatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatt 246  Q
    |||||| |||||         |||  |||||||||||||||| ||||| ||||||||||||||| ||| ||||| |||||| ||||  |||| | ||| |    
T  14217164 aattttttttttttttttttaaaataattatccgatacttcccgatacgtatcaggagagtatccgataattatcctgcactgatacatgccccaatact 14217065  T
Q  247 tctcaattaa--ttaattaaaataacttaactcttgag 282  Q
    || |||||||  |||| |||||| ||||||||||||||    
T  14217064 tcccaattaatgttaagtaaaatgacttaactcttgag 14217027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 320 - 398
Target Start/End: Complemental strand, 31236003 - 31235925
Alignment:
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||||||||||||||||||| |||| || | ||| |||||||||||||||||||||  |||||||| |||||||||    
T  31236003 taacaatgttccttttggatatagtatatcattgatgatgctctttttgggatatattgtgtatgtaattgactaatca 31235925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 20536773 - 20536884
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtcaattttccgatatgtatcagaagagtatcca 141  Q
    ||||||||| ||||||||||||||||| ||||||||||||| | |||  ||||||||| |||||       ||  |||||| ||||| ||||||||||||    
T  20536773 tgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcatatcctgcaccgatac-------ttgcccgatacgtatcggaagagtatcca 20536865  T
Q  142 aagattaaattttattttt 160  Q
    || ||||||||||||||||    
T  20536866 aatattaaattttattttt 20536884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 41 - 160
Target Start/End: Complemental strand, 6497770 - 6497648
Alignment:
Q  41 ttgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc-aat--tttccgatatgtatcagaagagta 137  Q
    |||||||| | ||||||||||||||||| |||||| |||||| | |||| ||||||||| ||||| ||||  ||  || |||||| ||||| | ||||||    
T  6497770 ttgtgaagtcccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgtctgattcttcccgatacgtatccggagagta 6497671  T
Q  138 tccaaagattaaattttattttt 160  Q
    |||||| ||||||||||||||||    
T  6497670 tccaaatattaaattttattttt 6497648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 7876712 - 7876833
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| |||||| |||||| | |||| ||||||||| ||||| || |    | || |||||| ||||| | |||||||    
T  7876712 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtat 7876811  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  7876812 ccaaatattaaattttattttt 7876833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 320 - 375
Target Start/End: Original strand, 9293663 - 9293718
Alignment:
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggatata 375  Q
    ||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||    
T  9293663 taacaatgttctttttggatatagtataacattaatggtgctctttttgggatata 9293718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 16561798 - 16561919
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| |||||| |||||| |||||| || |||||| ||||| || |    | || |||||| ||||| | |||||||    
T  16561798 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccttgcgtattctgcaccgatacctgcccgatacttcccgatacgtatccggagagtat 16561897  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  16561898 ccaaatattaaattttattttt 16561919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 38602442 - 38602321
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| |||||| |||||| | |||| ||||||||| ||||| || |    | || |||||| ||||| | |||||||    
T  38602442 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtat 38602343  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  38602342 ccaaatattaaattttattttt 38602321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 320 - 398
Target Start/End: Original strand, 12206266 - 12206344
Alignment:
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||||||||||||||||||||||||||| | |||||||| ||||| |||||||||   |||||| | |||||||||    
T  12206266 taacaatgttccttttggatataatataacattgatggtgctttttttcggatatattttgtatgtatttgactaatca 12206344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 320 - 398
Target Start/End: Original strand, 34146481 - 34146559
Alignment:
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||| ||||||||||||||||| ||||||| | ||| |||||||||||||||||||||  || ||||| |||||||||    
T  34146481 taacagtgttccttttggatatagtataacattgatgatgctctttttgggatatattgtgtaggtaattgactaatca 34146559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 306 - 400
Target Start/End: Complemental strand, 45159007 - 45158913
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatcacc 400  Q
    ||||||||||  | ||| ||||||| ||||||||||| |||| |||  |||||||||||||||| ||||||||  |||||||| |||||||||||    
T  45159007 atatagtatagcactaaaaatgttctttttggatatagtatagcaccgatggtgctctttttggtatatattgtgtatgtaattgactaatcacc 45158913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 4170622 - 4170501
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||  ||||||||||||||||| |||||| |||||| | |||| ||||||||| ||||| || |    | || |||||| ||||| | |||||||    
T  4170622 tgtgaagctccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcctgatacttcccgatacgtatccggagagtat 4170523  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  4170522 ccaaatattaaattttattttt 4170501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 33324816 - 33324937
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| || ||| |||||| | |||| ||||||||| ||||| || |    | || |||||| ||||| | |||||||    
T  33324816 tgtgaagccccgatacttcaaaatggatgatgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtat 33324915  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  33324916 ccaaatattaaattttattttt 33324937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 40309017 - 40308896
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| |||||||||||||| || |||||| |||||| | |||| ||||||||| ||||| || |    | || |||||| ||||| | |||||||    
T  40309017 tgtgaagccccgatacttcaaaatagatgacgtaccgtatcccatgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtat 40308918  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  40308917 ccaaatattaaattttattttt 40308896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 7807494 - 7807373
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatg-tcaat--tttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| ||||||||||||| | |||| ||| || || ||||| || || ||  || |||||| ||||| | | |||||    
T  7807494 tgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcttgtaccgatacctgttcgatacttcccgatacgtatccggaaagtat 7807395  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  7807394 ccaaatattaaattttattttt 7807373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 190 - 281
Target Start/End: Original strand, 12206171 - 12206264
Alignment:
Q  190 gatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataacttaactcttga 281  Q
    ||||| ||||| ||||||||| ||| ||||| |||||| ||||| |||| ||||| ||| ||||||||  ||| ||||||||||||||||||||    
T  12206171 gatacgtatcatgagagtatccgataattatcctgcactgatatatgccccgatacttcccaattaatggtaactaaaataacttaactcttga 12206264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 35996814 - 35996868
Alignment:
Q  324 aatgttccttttggatataatataacactaatggtgctctttttgggatatattg 378  Q
    ||||||| ||||||||||| ||||||||| ||||||||| |||||||||||||||    
T  35996814 aatgttcattttggatatagtataacacttatggtgctccttttgggatatattg 35996868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 293 - 400
Target Start/End: Original strand, 18301367 - 18301480
Alignment:
Q  293 ttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataacact----aatggtgctctttttgggatatattggatatgta 386  Q
    |||||||||||||  ||||| ||||  | || |||||||||||||||||||||||||||| |     |||||||||||||||| |||| |||  ||||||    
T  18301367 ttcttttttggatcgatataatatagcactagcaatgttccttttggatataatataacattgatgtatggtgctctttttggtatattttgcgtatgta 18301466  T
Q  387 atcgactaatcacc 400  Q
    || |||||||||||    
T  18301467 attgactaatcacc 18301480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 42 - 99
Target Start/End: Complemental strand, 45159418 - 45159361
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcac 99  Q
    ||||||||| ||||||||||||||||| ||||||||||||| |||||| ||| |||||    
T  45159418 tgtgaagccccgatacttcaaaatggatgacgtatcgtatcccttgcgtatcttgcac 45159361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 18300970 - 18301091
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    |||||||||  |||||||||||||||| ||||||||||||| | || | || |||||| ||||| ||||    | ||  ||||| ||||| | |||||||    
T  18300970 tgtgaagccctgatacttcaaaatggatgacgtatcgtatcccctgtgtattctgcaccgatacctgtctgatacttctcgatacgtatcgggagagtat 18301069  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  18301070 ccaaatattaaattttattttt 18301091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 117 - 160
Target Start/End: Complemental strand, 40497427 - 40497384
Alignment:
Q  117 ccgatatgtatcagaagagtatccaaagattaaattttattttt 160  Q
    |||||| ||||||| |||||||||||||||||||||||||||||    
T  40497427 ccgatacgtatcaggagagtatccaaagattaaattttattttt 40497384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 355 - 398
Target Start/End: Original strand, 10573818 - 10573861
Alignment:
Q  355 tggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    |||||||||||||| ||||||||| ||||||||| |||||||||    
T  10573818 tggtgctctttttgagatatattgtatatgtaattgactaatca 10573861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 377
Target Start/End: Original strand, 2319576 - 2319632
Alignment:
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggatatatt 377  Q
    ||||||||||||||||||||||| |||| |  | || |||||||||||||||||||||    
T  2319576 taacaatgttccttttggatatagtatatccatgat-gtgctctttttgggatatatt 2319632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 343
Target Start/End: Original strand, 5371347 - 5371399
Alignment:
Q  293 ttcttttttggat--atatagtatatgaataacaatgttccttttggatataa 343  Q
    |||||||||||||  ||||||||||  | ||||||||||||||||||||||||    
T  5371347 ttcttttttggatcgatatagtatagcactaacaatgttccttttggatataa 5371399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 308
Target Start/End: Complemental strand, 6497046 - 6497010
Alignment:
Q  271 ttaactcttgagtactgatgtgttcttttttggatata 308  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  6497046 ttaactctt-agtactgatgtgttcttttttggatata 6497010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 350
Target Start/End: Original strand, 20537114 - 20537170
Alignment:
Q  296 ttttttggat--atatagtatatgaataacaatgttccttttggatataatataaca 350  Q
    ||||||||||  ||||||||||  | ||||||||||||||||||||||| |||||||    
T  20537114 ttttttggatcgatatagtatagcactaacaatgttccttttggatatagtataaca 20537170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 5588105 - 5588145
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatc 82  Q
    ||||||||  ||||||||||||||||| |||||||||||||    
T  5588105 tgtgaagctccgatacttcaaaatggatgacgtatcgtatc 5588145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 120; Significance: 3e-61; HSPs: 75)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 39 - 305
Target Start/End: Complemental strand, 44960258 - 44959989
Alignment:
Q  39 atttgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagag 135  Q
    |||||||||||  ||||||||||||||||| ||||||||||||| | |||| |||||||||||| || ||||    | || |||||||||||||||||||    
T  44960258 atttgtgaagctccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcactgacacctgtctgatacttcccgatatgtatcagaagag 44960159  T
Q  136 tatccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatct 235  Q
    |||||||||||||||||||||||||        |||  ||||| ||||||||| ||||||||||||| ||||||| ||| |||||||||||| |||| ||    
T  44960158 tatccaaagattaaattttattttttgtaaaaataa--ttatcggatacttcccgatacatatcaggggagtatccgataattattctgcactgatacct 44960061  T
Q  236 gcctcgatatttctcaattaat--taattaaaataacttaactcttgagtactgatgtgttcttttttggat 305  Q
     || || |||||| ||||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  44960060 accccggtatttcccaattaatgttaactaaaataacttaactcttgagtactgatgtgttcttttttggat 44959989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 117 - 400
Target Start/End: Original strand, 21409464 - 21409746
Alignment:
Q  117 ccgatatgtatcagaagagtatccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatga 216  Q
    |||||| ||||||| |||||||||||||||||||||||||||||         | ||||||| |||||||||| |||| ||||||||||||||||||| |    
T  21409464 ccgatacgtatcaggagagtatccaaagattaaattttatttttttaaaa---ataattatcggatacttcctaatacgtatcaggagagtatctgataa 21409560  T
Q  217 ttattctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttcttttttggat--atatagt 312  Q
    |||| || |||||||| ||||| | ||| ||  |||||||  |||| ||||||||||||||||||||||| | |||  |||||||||||||  |||||||    
T  21409561 ttatcctacaccgatacctgccccaatactttccaattaatgttaactaaaataacttaactcttgagta-taatg-cttcttttttggatcgatatagt 21409658  T
Q  313 atatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatcacc 400  Q
    |||  | ||||||| || |||||||||||| |||| |||| ||| |||||||||||| ||||||||  |||||||| |||||||||||    
T  21409659 atagcactaacaatatttcttttggatatagtatagcacttatgttgctctttttggaatatattgtgtatgtaattgactaatcacc 21409746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 172 - 398
Target Start/End: Complemental strand, 23970115 - 23969887
Alignment:
Q  172 aattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataa 269  Q
    ||||| ||||||||| | ||||| ||||||||||||||| ||| ||||| ||||||| |||  ||||   ||| ||||||||||||  ||||||||||||    
T  23970115 aattacccgatactttccgatacgtatcaggagagtatccgataattatcctgcaccaatacatgccctaatacttctcaattaatgttaattaaaataa 23970016  T
Q  270 cttaactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctcttttt 367  Q
    |||||||||||||||  | ||  |||||||||||||  ||||||||||  | ||||||||||||||||||||||| |||| |||| ||||||||||||||    
T  23970015 cttaactcttgagtatag-tgc-ttcttttttggatcgatatagtatagcactaacaatgttccttttggatatagtatagcacttatggtgctcttttt 23969918  T
Q  368 gggatatattggatatgtaatcgactaatca 398  Q
    |||||| ||||  |||||||| |||||||||    
T  23969917 gggataaattgtgtatgtaattgactaatca 23969887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 119 - 398
Target Start/End: Complemental strand, 554930 - 554651
Alignment:
Q  119 gatatgtatcagaagagtatccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgatt 218  Q
    |||| ||||||| ||||||| | |||||||||||||||||||        |||  ||||||||||||||| ||||  ||||||||||||||| ||| |||    
T  554930 gatacgtatcaggagagtattcgaagattaaattttattttttttaaaaataa--ttatccgatacttcccgataagtatcaggagagtatccgataatt 554833  T
Q  219 attctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttcttttttggat--atatagtat 314  Q
    || ||||||||||| ||||| | ||| ||| |||| ||  |||| ||||||||||||||||||||||| |  ||  |||||||||||||  |||||||||    
T  554832 atcctgcaccgatacctgccccaatacttcccaatcaatgttaactaaaataacttaactcttgagta-tagtg-cttcttttttggatcgatatagtat 554735  T
Q  315 atgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    |  | |||||||||  ||||| |||||| |||| |||| ||| |||||||||||||||||||||  |||||||| |||||||||    
T  554734 aacactaacaatgtatcttttagatatagtatatcacttatgatgctctttttgggatatattgtgtatgtaattgactaatca 554651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 119 - 308
Target Start/End: Original strand, 21179911 - 21180100
Alignment:
Q  119 gatatgtatcagaagagtatccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgatt 218  Q
    |||||||||||| ||||||||| ||||||||||||||||||         |||  ||||||||||||||| ||||| ||||||||||||||||||| |||    
T  21179911 gatatgtatcaggagagtatccgaagattaaattttattttaaaaaataataa--ttatccgatacttcccgatacgtatcaggagagtatctgataatt 21180008  T
Q  219 attctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    ||  |||| | ||| ||||| | ||||||| ||  ||||  ||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  21180009 atcatgcatcaatacctgccccaatatttcccagctaatgataactaaaataacttaactcttgagtactgatgtgttcttttttggatata 21180100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 52 - 398
Target Start/End: Original strand, 35159870 - 35160242
Alignment:
Q  52 cgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc-aat--tttccgatatgtatcagaagagtatccaaagatta 148  Q
    ||||||||||||||||| || |||||||||| | |||  || |||||| ||||| |||| |||  || |||||| ||||||| ||||||||| |||||||    
T  35159870 cgatacttcaaaatggatgatgtatcgtatcccctgcatattctgcaccgatacttgtctaatacttcccgatacgtatcaggagagtatccgaagatta 35159969  T
Q  149 aattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttc 248  Q
    |||||||||||         |||  ||||| |||| |||| |||||||||||| |||||||| ||| || ||  | ||| |||||||||| ||||| |||    
T  35159970 aattttattttaaaaaaaaataa--ttatctgatagttcccgatacatatcagaagagtatccgataat-atctttcactgatatctgccccgatacttc 35160066  T
Q  249 tcaattaat--taattaaaataacttaactcttgagtactgatgtgttcttt------------------tttggat--atatagtata----tgaataa 322  Q
    |||||||||  |||||||||||| ||||||||||||||||||||||||||||                  |||||||  ||||||||||    | | |||    
T  35160067 tcaattaatgttaattaaaataatttaactcttgagtactgatgtgttcttttttagatagtgcttcttttttggatcgatatagtatagcactaattaa 35160166  T
Q  323 caatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    |||||||||||||||||||| |||| ||||||||||||| ||||||||||||||||  |||||||| |||||||||    
T  35160167 caatgttccttttggatatagtatagcactaatggtgctttttttgggatatattgtgtatgtaattgactaatca 35160242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 178 - 308
Target Start/End: Complemental strand, 23079092 - 23078960
Alignment:
Q  178 ccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataacttaac 275  Q
    ||||||||||| ||||| ||||||||||||||| |||  |||| ||| ||||||| ||| | ||||||||| ||||||||  ||||||||||||||||||    
T  23079092 ccgatacttcccgatacgtatcaggagagtatccgatagttatcctgtaccgatacctgtcccgatatttcccaattaatgttaattaaaataacttaac 23078993  T
Q  276 tcttgagtactgatgtgttcttttttggatata 308  Q
    |||| ||||||||||||||||||||||||||||    
T  23078992 tcttaagtactgatgtgttcttttttggatata 23078960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 42 - 398
Target Start/End: Original strand, 33454065 - 33454446
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||| ||||||||||| ||||||||||||| | |||| |||||||||||||| ||||||   | ||  ||||| ||||||| | |||||    
T  33454065 tgtgaagccccgatatttcaaaatggatgacgtatcgtatcccctgcgtatcctgcactgatatatgtcagatacttctcgatacgtatcaggaaagtat 33454164  T
Q  139 ccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcc 238  Q
    || |||||||||||||||||||        |||  ||| | |||||||||  |||| ||| || |||||||  ||| ||||| || ||||||||  ||||    
T  33454165 ccgaagattaaattttattttttaaaaaaataa--ttagctgatacttcccaatacttattagaagagtattcgataattatcctacaccgatacttgcc 33454262  T
Q  239 tcgatatttctcaattaat--taattaaaataacttaactcttgagtactgatgtgttcttttttggatata----------------------tagtat 314  Q
     ||||||||| ||||||||  | | ||||| ||||||||||||||||||| |||||||||||| ||||||||                      ||||||    
T  33454263 ccgatatttcccaattaatgttgactaaaaaaacttaactcttgagtacttatgtgttcttttatggatatagtgcttcttttttggatcgatatagtat 33454362  T
Q  315 atgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    |  | ||||||||||| |||||||||||||||| |||| ||| |||||||||||| ||||||||  ||||||||||||||||||    
T  33454363 aacactaacaatgttcattttggatataatatagcactgatgatgctctttttggtatatattgtgtatgtaatcgactaatca 33454446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 119 - 308
Target Start/End: Original strand, 40041454 - 40041642
Alignment:
Q  119 gatatgtatcagaagagtatccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgatt 218  Q
    |||| ||||||| ||||||||| ||||||||||||||||||          | |||||||||||| |||| ||||| ||||||||||||||| ||| |||    
T  40041454 gatacgtatcaggagagtatccgaagattaaattttattttaaaaaaa---ataattatccgatatttcccgatacgtatcaggagagtatccgataatt 40041550  T
Q  219 attctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    || |||||| |||| ||||| ||||||||| |||||||  |||| |||||||| |||||| |||||||||||||||||||||||| ||||||    
T  40041551 atcctgcactgatacctgccccgatatttcccaattaatgttaactaaaataatttaactattgagtactgatgtgttcttttttagatata 40041642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 53 - 398
Target Start/End: Original strand, 24956257 - 24956601
Alignment:
Q  53 gatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtatccaaagattaa 149  Q
    ||||||||||||| || ||||||||||||| | | |  ||| |||| ||||||||| |    | ||||||||| ||||||  ||||||||| ||||||||    
T  24956257 gatacttcaaaattgatgacgtatcgtatcccctacatatcatgcattgatacatgcctgatactttccgatacgtatcaagagagtatccgaagattaa 24956356  T
Q  150 attttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttct 249  Q
    ||||||||||         |||  |||||||||||||||| |||| ||||| ||||||||||||| ||||| ||||||||||| ||||| | ||| |||     
T  24956357 attttattttaaagaaaaataa--ttatccgatacttcctaatacgtatcaagagagtatctgataattatcctgcaccgatacctgccacaatacttcc 24956454  T
Q  250 caattaa--ttaattaaaataacttaactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttttggatataata 345  Q
    |||||||  |||| ||||||||||||||||||||||| | |||  |||  ||||||||  ||||||||||  | |||||||||| ||||||||   | ||    
T  24956455 caattaatgttaactaaaataacttaactcttgagta-taatg-cttc--ttttggatcgatatagtatagcactaacaatgtttcttttgga---agta 24956547  T
Q  346 taacac-taatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    || ||| | |||||||||| |||||||||||||   |||||||| |||||||||    
T  24956548 tagcactttatggtgctctctttgggatatattatgtatgtaattgactaatca 24956601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 223 - 398
Target Start/End: Original strand, 48153722 - 48153899
Alignment:
Q  223 tgcaccgatatctgcctcgatatttctcaattaat--taattaaaataacttaactcttgagtactgatgtgttcttttttggat--atatagtatatga 318  Q
    |||||| ||| ||||| | ||| ||| ||||||||  |||||||||||||||||||||||||||  | ||  |||||||||||||  ||||||||||  |    
T  48153722 tgcaccaatacctgccccaatacttcccaattaatgttaattaaaataacttaactcttgagtatag-tgc-ttcttttttggatcgatatagtatagca 48153819  T
Q  319 ataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
     ||||||||||||||||||||||| |||| |||| ||| |||||||||||||||||||||  |||||||| |||||||||    
T  48153820 ctaacaatgttccttttggatatagtatagcacttatgatgctctttttgggatatattgtgtatgtaattgactaatca 48153899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 178 - 301
Target Start/End: Complemental strand, 15878407 - 15878282
Alignment:
Q  178 ccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataacttaac 275  Q
    ||||||||| | ||||| ||||||||||||||| ||| ||||| || ||||| |||||||| ||||| ||| ||||||||  ||| ||||||||||||||    
T  15878407 ccgatactttccgatacgtatcaggagagtatccgatcattatcctacaccggtatctgccccgatacttcccaattaatattaactaaaataacttaac 15878308  T
Q  276 tcttgagtactgatgtgttctttttt 301  Q
    ||||||||| ||||||||||||||||    
T  15878307 tcttgagtattgatgtgttctttttt 15878282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 306 - 398
Target Start/End: Original strand, 44270004 - 44270096
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||||||  | ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||  |||||||| |||||||||    
T  44270004 atatagtataacactaacaatgttccttttggatatagtataacattaatggtgctctttttgggatatattgtttatgtaattgactaatca 44270096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 172 - 308
Target Start/End: Complemental strand, 1400257 - 1400119
Alignment:
Q  172 aattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataa 269  Q
    ||||||| ||||||||| ||||| ||||||||||||||| ||| ||||| || |||   |||||||| ||||| ||| ||||||||  ||||||||||||    
T  1400257 aattatctgatacttcccgatacgtatcaggagagtatccgatcattatcctacacatgtatctgccccgatacttcccaattaatgttaattaaaataa 1400158  T
Q  270 cttaactcttgagtactgatgtgttcttttttggatata 308  Q
    |||||||||| |||| ||||||||| ||||||| |||||    
T  1400157 cttaactcttaagtattgatgtgttattttttgaatata 1400119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 172 - 308
Target Start/End: Complemental strand, 36758005 - 36757867
Alignment:
Q  172 aattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataa 269  Q
    |||||||| |||||||| ||||| ||||||||||||||| ||| |||||  | ||| ||||||||||  |||| ||| ||||||||  ||| ||||||||    
T  36758005 aattatccaatacttcccgatacgtatcaggagagtatccgataattatctttcactgatatctgccctgatacttcccaattaatgttaactaaaataa 36757906  T
Q  270 cttaactcttgagtactgatgtgttcttttttggatata 308  Q
    ||||||||||||||||||||||||  ||||||| |||||    
T  36757905 cttaactcttgagtactgatgtgtcattttttgtatata 36757867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 172 - 308
Target Start/End: Complemental strand, 36767529 - 36767391
Alignment:
Q  172 aattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataa 269  Q
    |||||||| |||||||| ||||| ||||||||||||||| ||| |||||  | ||| ||||||||||  |||| ||| ||||||||  ||| ||||||||    
T  36767529 aattatccaatacttcccgatacgtatcaggagagtatccgataattatctttcactgatatctgccctgatacttcccaattaatgttaactaaaataa 36767430  T
Q  270 cttaactcttgagtactgatgtgttcttttttggatata 308  Q
    ||||||||||||||||||||||||  ||||||| |||||    
T  36767429 cttaactcttgagtactgatgtgtcattttttgtatata 36767391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 196 - 301
Target Start/End: Complemental strand, 36763761 - 36763654
Alignment:
Q  196 tatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataacttaactcttgagtactgatgtgt 293  Q
    ||||||||||||||| ||| |||||  | ||| |||||||||| ||||| ||| ||||||||  ||| ||||||||||||||||||||||||||||||||    
T  36763761 tatcaggagagtatccgataattatctttcactgatatctgccccgatacttcccaattaatgttaactaaaataacttaactcttgagtactgatgtgt 36763662  T
Q  294 tctttttt 301  Q
     |||||||    
T  36763661 cctttttt 36763654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 172 - 277
Target Start/End: Original strand, 44269851 - 44269958
Alignment:
Q  172 aattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataa 269  Q
    ||||| ||||||||||| ||||| ||||| || |||||||||| |||||||| || ||||||||||||||||||||| |||| ||  |||| ||||||||    
T  44269851 aattaaccgatacttcccgatacgtatcaagaaagtatctgataattattctacatcgatatctgcctcgatatttcacaataaatgttaactaaaataa 44269950  T
Q  270 cttaactc 277  Q
    ||||||||    
T  44269951 cttaactc 44269958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 320 - 398
Target Start/End: Original strand, 38064969 - 38065046
Alignment:
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||||||||||||||||||| |||| ||||| ||||||||||||||||||||||||  |||||||| |||||||||    
T  38064969 taacaatgttccttttggatatagtatagcacta-tggtgctctttttgggatatattgcgtatgtaattgactaatca 38065046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 320 - 396
Target Start/End: Complemental strand, 1400085 - 1400009
Alignment:
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaat 396  Q
    ||||||||||||||||||||||| ||||||| | ||| |||||||||||||||||||||  |||||||| |||||||    
T  1400085 taacaatgttccttttggatatagtataacattgatgatgctctttttgggatatattgtgtatgtaattgactaat 1400009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 306 - 398
Target Start/End: Complemental strand, 19820829 - 19820737
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||||||  | ||||||||||||||||||||||| ||||| ||| ||||||||||||||| |||||||||   ||||||| |||||||||    
T  19820829 atatagtatagcactaacaatgttccttttggatatagtataatactgatggtgctctttttgagatatattgtgcatgtaattgactaatca 19820737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 326 - 398
Target Start/End: Original strand, 40053573 - 40053645
Alignment:
Q  326 tgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||||||||||||| ||||||||| ||||||||||||||| | ||||||| ||||||||| |||||||||    
T  40053573 tgttccttttggatatagtataacactgatggtgctctttttgaggtatattgcatatgtaattgactaatca 40053645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 25969392 - 25969513
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| ||||||||||||| | |||| ||||||||| ||||| || |    | || |||||| ||||| | |||||||    
T  25969392 tgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtat 25969491  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  25969492 ccaaatattaaattttattttt 25969513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 306 - 388
Target Start/End: Complemental strand, 15878255 - 15878173
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaat 388  Q
    ||||||||||  | ||||||||||| ||||||||||| ||||||||| ||| |||||||||||||||||||||  ||||||||    
T  15878255 atatagtataacactaacaatgttcattttggatatagtataacactgatgatgctctttttgggatatattgtgtatgtaat 15878173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 304 - 398
Target Start/End: Complemental strand, 44959170 - 44959076
Alignment:
Q  304 atatatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||||||||  | || |||||||||||||||||||| || |||||| || |||||||||||| |||||||||  |||||||| |||||||||    
T  44959170 atatatagtatagcactagcaatgttccttttggatatagtacaacactcatagtgctctttttgagatatattgtgtatgtaattgactaatca 44959076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 44 - 160
Target Start/End: Complemental strand, 1043189 - 1043070
Alignment:
Q  44 tgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtatcc 140  Q
    ||||||| ||||||||||||||||| ||||||||||||| | |||| ||||||||  ||||| || |    | ||||||||| ||||| | |||||||||    
T  1043189 tgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcatcgatacctgcctgatactttccgatacgtatcgggagagtatcc 1043090  T
Q  141 aaagattaaattttattttt 160  Q
    ||| ||||||||||||||||    
T  1043089 aaatattaaattttattttt 1043070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 115 - 299
Target Start/End: Original strand, 38064736 - 38064921
Alignment:
Q  115 ttccgatatgtatcagaagagtatccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgat 214  Q
    |||||||| ||||||  ||||||||| |||||||||||||||||||         ||||||||| |||| ||||  |||| |||| |||| |||||||||    
T  38064736 ttccgatacgtatcaagagagtatccgaagattaaattttattttttaaaata--aaaattatcagatatttcccaatacgtatctggagggtatctgat 38064833  T
Q  215 gattattctgcaccgatatctgcctcgatatttctcaattaatt---aattaaaataacttaactcttgagtactgatgtgttctttt 299  Q
     ||||| ||||||| ||| || || || |||||| ||||||||    || ||||||||||||||| ||||||||| ||||||| ||||    
T  38064834 aattatcctgcaccaatacctaccccgttatttcccaattaatattaaactaaaataacttaacttttgagtactaatgtgttttttt 38064921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 257 - 308
Target Start/End: Original strand, 11058661 - 11058712
Alignment:
Q  257 ttaattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  11058661 ttaactaaaataacttaactcttgtgtactgatgtgttcttttttggatata 11058712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 40095645 - 40095766
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| |||||| |||||| | |||| ||||||||| ||||| || |    | ||||||||| ||||| | |||||||    
T  40095645 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtat 40095744  T
Q  139 ccaaagattaaattttattttt 160  Q
    | ||| ||||||||||||||||    
T  40095745 ctaaatattaaattttattttt 40095766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 306 - 400
Target Start/End: Complemental strand, 9250142 - 9250048
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatcacc 400  Q
    ||||||||||  | ||||||||||| ||||| ||||| |||| |||| ||| |||||||||||| ||||||||  |||||||| |||||||||||    
T  9250142 atatagtataacactaacaatgttctttttgaatatagtatatcactgatgatgctctttttggtatatattgtgtatgtaattgactaatcacc 9250048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 306 - 400
Target Start/End: Complemental strand, 9283692 - 9283598
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatcacc 400  Q
    ||||||||||  | ||||||||||| ||||| ||||| |||| |||| ||| |||||||||||| ||||||||  |||||||| |||||||||||    
T  9283692 atatagtataacactaacaatgttctttttgaatatagtatatcactgatgatgctctttttggtatatattgtgtatgtaattgactaatcacc 9283598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 320 - 398
Target Start/End: Complemental strand, 23078926 - 23078848
Alignment:
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    |||||||||||||||| |||||| |||| |||| ||| |||||||||||||||||||||  |||||||| || ||||||    
T  23078926 taacaatgttcctttttgatatagtatagcactgatgatgctctttttgggatatattgtgtatgtaattgagtaatca 23078848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 306 - 400
Target Start/End: Original strand, 25969791 - 25969885
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatcacc 400  Q
    ||||||||||  | ||||||||||| ||||| ||||| |||| |||| ||| |||||||||||| ||||||||  |||||||| |||||||||||    
T  25969791 atatagtataacactaacaatgttctttttgaatatagtatatcactgatgatgctctttttggtatatattgtgtatgtaattgactaatcacc 25969885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 118 - 358
Target Start/End: Original strand, 26973127 - 26973371
Alignment:
Q  118 cgatatgtatcagaagagtatccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcagga----gagtatctga 213  Q
    ||||| ||||||||||||||||| ||||||||||||| |||||        |  ||||||||||||||||| ||||| ||||||||     |||||| ||    
T  26973127 cgatacgtatcagaagagtatccgaagattaaatttttttttttttttaaat--aattatccgatacttcccgatacgtatcaggaaattaagtatccga 26973224  T
Q  214 tgattattctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttcttttttggat--atat 309  Q
    | |||||  |||||| ||||||||| | ||| ||  |||||||  |||  |||||||| |||||||||||||| |  ||  |||||||||||||  ||||    
T  26973225 taattatcatgcacctatatctgccccaataatttccaattaacgttatataaaataatttaactcttgagta-tagtg-cttcttttttggatcgatat 26973322  T
Q  310 agtatatgaataacaatgttccttttggatataatataacactaatggt 358  Q
    ||||||  | |||||||||| |||||||||||| || |||||| |||||    
T  26973323 agtatagcactaacaatgtttcttttggatatagtacaacacttatggt 26973371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 306 - 388
Target Start/End: Original strand, 36413631 - 36413713
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaat 388  Q
    ||||||||||  | ||||||||||||||||||||||| ||||||||  ||| |||||||||| ||||||||||  ||||||||    
T  36413631 atatagtataacactaacaatgttccttttggatatagtataacaccgatgatgctctttttaggatatattgtgtatgtaat 36413713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 320 - 398
Target Start/End: Complemental strand, 36757829 - 36757751
Alignment:
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||||||||||||||||||| |||| |||| |||||||| || ||||||||||||   |||||||| |||||||||    
T  36757829 taacaatgttccttttggatatagtatagcactgatggtgcttttcttgggatatattatgtatgtaattgactaatca 36757751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 320 - 398
Target Start/End: Complemental strand, 36763608 - 36763531
Alignment:
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||||||||||||||||||| |||| |||| |||||||| ||||| ||||||||||  |||||||| |||||||||    
T  36763608 taacaatgttccttttggatatagtatagcactgatggtgct-ttttttggatatattgtgtatgtaattgactaatca 36763531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 320 - 398
Target Start/End: Complemental strand, 36767353 - 36767275
Alignment:
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||||||||||||||||||| |||| |||| |||||||| || ||||||||||||   |||||||| |||||||||    
T  36767353 taacaatgttccttttggatatagtatagcactgatggtgcttttcttgggatatattatgtatgtaattgactaatca 36767275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 41 - 160
Target Start/End: Original strand, 42896996 - 42897107
Alignment:
Q  41 ttgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtcaattttccgatatgtatcagaagagtatcc 140  Q
    |||||||||| ||||||||||||||||| |||||| |||||| | |||| ||||||||| |||||        || |||||| ||||| | |||||||||    
T  42896996 ttgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatac--------ttcccgatacgtatccggagagtatcc 42897087  T
Q  141 aaagattaaattttattttt 160  Q
    ||| ||||||||||||||||    
T  42897088 aaatattaaattttattttt 42897107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 39520795 - 39520905
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtcaattttccgatatgtatcagaagagtatcca 141  Q
    ||||||||| ||||||||||||||||| |||||| |||||| | |||| ||||||||| |||||        || |||||| ||||| | ||||||||||    
T  39520795 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatac--------ttcccgatacgtatccggagagtatcca 39520886  T
Q  142 aagattaaattttattttt 160  Q
    || ||||||||||||||||    
T  39520887 aatattaaattttattttt 39520905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 160
Target Start/End: Original strand, 19510517 - 19510639
Alignment:
Q  41 ttgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagta 137  Q
    ||||||| || ||||||||||||||||| ||||||||||||| | || | ||| |||||||||||||| |    | || | |||||||||| |  |||||    
T  19510517 ttgtgaaaccccgatacttcaaaatggatgacgtatcgtatcccctgtgtatcatgcactgatacatgcccgatacttcctgatatgtatcgggtgagta 19510616  T
Q  138 tccaaagattaaattttattttt 160  Q
    |||||| ||||||||||||||||    
T  19510617 tccaaatattaaattttattttt 19510639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 44 - 160
Target Start/End: Complemental strand, 27398165 - 27398046
Alignment:
Q  44 tgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatg-tcaat--tttccgatatgtatcagaagagtatcc 140  Q
    |||||||  ||||||| |||||||| ||||||  ||||| | |||| ||||||||||||||| || || ||  ||||| ||||||||| | |||||||||    
T  27398165 tgaagcccggatactttaaaatggatgacgtactgtatcccctgcgtatcctgcactgatacctgctcgatactttccaatatgtatccggagagtatcc 27398066  T
Q  141 aaagattaaattttattttt 160  Q
    ||| ||||||||||||||||    
T  27398065 aaatattaaattttattttt 27398046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 27353916 - 27354037
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| |||||| |||||  | |||| ||||||||| ||||| || |    | || |||||| ||||| | |||||||    
T  27353916 tgtgaagccccgatacttcaaaatggatgacgtaccgtattccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtat 27354015  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  27354016 ccaaatattaaattttattttt 27354037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 34238153 - 34238274
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| |||||| |||||| | |||| || |||||| ||||| || |    | ||||||||| ||||  | |||||||    
T  34238153 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtattctgcaccgatacctgcccgatactttccgatacgtattcggagagtat 34238252  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  34238253 ccaaatattaaattttattttt 34238274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 48163403 - 48163524
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||  |||||| |||||| | |||| ||||||||| ||||| || |    | || |||||| ||||| | |||||||    
T  48163403 tgtgaagccccgatacttcaaaatgggtgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtat 48163502  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  48163503 ccaaatattaaattttattttt 48163524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 55 - 160
Target Start/End: Complemental strand, 9250529 - 9250421
Alignment:
Q  55 tacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtatccaaagattaaat 151  Q
    |||||||||||||| ||||||||||||| | |||| ||||||||| ||||| || |    | || |||||| ||||| | |||||||||||| |||||||    
T  9250529 tacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatccaaatattaaat 9250430  T
Q  152 tttattttt 160  Q
    |||||||||    
T  9250429 tttattttt 9250421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 398
Target Start/End: Original strand, 35136309 - 35136383
Alignment:
Q  324 aatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||| ||||| ||||| |||| || ||||| ||||||||||| ||||||||| ||||||||| |||||||||    
T  35136309 aatgttcattttgaatatattatagcattaatgatgctctttttgagatatattgtatatgtaattgactaatca 35136383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 42 - 159
Target Start/End: Original strand, 38064590 - 38064710
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtat 138  Q
    ||||||||| |||||||| |||||||| ||| || |||||| | |||| ||| ||||||||||| || |    | ||||||||| ||||||| |||||||    
T  38064590 tgtgaagccccgatactttaaaatggatgacataacgtatctcatgcgtatcatgcactgatacctgaccgatactttccgatacgtatcaggagagtat 38064689  T
Q  139 ccaaagattaaattttatttt 159  Q
    || ||||||||||| ||||||    
T  38064690 ccgaagattaaattatatttt 38064710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 337 - 398
Target Start/End: Original strand, 11058729 - 11058790
Alignment:
Q  337 gatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    |||||||| ||||||| ||||||||||||||||||||||||  ||||||||| ||| |||||    
T  11058729 gatataatgtaacactgatggtgctctttttgggatatattatatatgtaattgacaaatca 11058790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 160
Target Start/End: Complemental strand, 34122735 - 34122616
Alignment:
Q  44 tgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtatcc 140  Q
    |||||||| |||||||||||||||| |||||| ||||||   |||| ||||||||| ||||| || |    | || |||||| ||||| | |||||||||    
T  34122735 tgaagcctagatacttcaaaatggatgacgtaccgtatcctctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatctggagagtatcc 34122636  T
Q  141 aaagattaaattttattttt 160  Q
    ||| ||||||||||||||||    
T  34122635 aaatattaaattttattttt 34122616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 41 - 160
Target Start/End: Original strand, 11829683 - 11829805
Alignment:
Q  41 ttgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagta 137  Q
    |||||||||| ||||||||||||||||| |||||| |||||| | |||| ||||||||| ||||  || |    | || || ||| ||||| | ||||||    
T  11829683 ttgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatatctgcctgatacttcccaatacgtatccggagagta 11829782  T
Q  138 tccaaagattaaattttattttt 160  Q
    |||||| ||||||||||||||||    
T  11829783 tccaaatattaaattttattttt 11829805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 344 - 400
Target Start/End: Complemental strand, 26773361 - 26773305
Alignment:
Q  344 tataacactaatggtgctctttttgggatatattggatatgtaatcgactaatcacc 400  Q
    |||||||||||||||||||||||||| |||| |||  |||||||| |||||||||||    
T  26773361 tataacactaatggtgctctttttggtatattttgcgtatgtaattgactaatcacc 26773305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 47238727 - 47238616
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtcaattttccgatatgtatcagaagagtatcca 141  Q
    ||||||||| ||||||||||||||||| || |||||||||| | |||| ||  ||||| ||||| || |       ||||||||||| | ||||||||||    
T  47238727 tgtgaagccccgatacttcaaaatggatgatgtatcgtatcccctgcgtatattgcaccgatacctgcc-------cgatatgtatctggagagtatcca 47238635  T
Q  142 aagattaaattttattttt 160  Q
    || ||||||||||||||||    
T  47238634 aatattaaattttattttt 47238616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 160
Target Start/End: Complemental strand, 49015113 - 49015069
Alignment:
Q  116 tccgatatgtatcagaagagtatccaaagattaaattttattttt 160  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||    
T  49015113 tccgatacgtatcagaagagtatccaacgattaaattttattttt 49015069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 400
Target Start/End: Complemental strand, 16564087 - 16563967
Alignment:
Q  293 ttcttttttggat--atatagtatatgaataacaatgttccttttggatata-----------atataacactaatggtgctctttttgggatatattgg 379  Q
    |||||||||||||  ||||||||||  | |||||||||||||||||||||||           |||||||||| |||||||||||||||| |||| |||     
T  16564087 ttcttttttggatcgatatagtatagcattaacaatgttccttttggatatagtatagtattgatataacactgatggtgctctttttggtatattttgc 16563988  T
Q  380 atatgtaatcgactaatcacc 400  Q
     |||||||| |||||||||||    
T  16563987 gtatgtaattgactaatcacc 16563967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 400
Target Start/End: Original strand, 16601575 - 16601695
Alignment:
Q  293 ttcttttttggat--atatagtatatgaataacaatgttccttttggatata-----------atataacactaatggtgctctttttgggatatattgg 379  Q
    |||||||||||||  ||||||||||  | |||||||||||||||||||||||           |||||||||| |||||||||||||||| |||| |||     
T  16601575 ttcttttttggatcgatatagtatagcattaacaatgttccttttggatatagtatagtattgatataacactgatggtgctctttttggtatattttgc 16601674  T
Q  380 atatgtaatcgactaatcacc 400  Q
     |||||||| |||||||||||    
T  16601675 gtatgtaattgactaatcacc 16601695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 16850781 - 16850902
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||| ||||||||||| |||||| |||||  | || | ||| ||||| ||||| || |    | ||||||||| ||||| |||||||||    
T  16850781 tgtgaagccccgatatttcaaaatggatgacgtaccgtattccctgtgtatcatgcaccgatacttgcccgatactttccgatacgtatctgaagagtat 16850880  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  16850881 ccaaatattaaattttattttt 16850902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 117 - 160
Target Start/End: Original strand, 23311795 - 23311838
Alignment:
Q  117 ccgatatgtatcagaagagtatccaaagattaaattttattttt 160  Q
    |||||||||||||| ||||||||| |||||||||||||||||||    
T  23311795 ccgatatgtatcaggagagtatccgaagattaaattttattttt 23311838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 26773832 - 26773711
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| |||||||| ||||| || ||||||||||||| |||||| ||||||||| ||||  || |    | ||  ||||| ||||| | |||||||    
T  26773832 tgtgaagccccgatactttaaaattgatgacgtatcgtatcccttgcgtatcctgcaccgatatctgcccgatacttctcgatacgtatcgggagagtat 26773733  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  26773732 ccaaatattaaattttattttt 26773711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 38262994 - 38263115
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| |||||| |||||    |||| ||||||||  ||||| || |    | ||||||||| ||||| | |||||||    
T  38262994 tgtgaagccccgatacttcaaaatggatgacgtaccgtattctctgcgtatcctgcatcgatacctgcccgatactttccgatacgtatccggagagtat 38263093  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  38263094 ccaaatattaaattttattttt 38263115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 19820909 - 19820863
Alignment:
Q  114 tttccgatatgtatcagaagagtatccaaagattaaattttattttt 160  Q
    ||||||||||||||||| ||||||||| |||||||||||||| ||||    
T  19820909 tttccgatatgtatcaggagagtatccgaagattaaattttaatttt 19820863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 295
Target Start/End: Complemental strand, 47719990 - 47719952
Alignment:
Q  257 ttaattaaaataacttaactcttgagtactgatgtgttc 295  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  47719990 ttaactaaaataacttaactcttgagtactgatgtgttc 47719952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 293 - 347
Target Start/End: Complemental strand, 1042914 - 1042858
Alignment:
Q  293 ttcttttttggat--atatagtatatgaataacaatgttccttttggatataatata 347  Q
    |||||||||||||  ||||||||||  | ||||||||||||||||||||||||||||    
T  1042914 ttcttttttggatcgatatagtataacactaacaatgttccttttggatataatata 1042858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 337 - 398
Target Start/End: Original strand, 21180133 - 21180194
Alignment:
Q  337 gatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    |||||| ||||||||| ||| || |||||||||||||||||| |||| |||| |||||||||    
T  21180133 gatatagtataacactgatgatgttctttttgggatatattgtatatctaattgactaatca 21180194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 400
Target Start/End: Complemental strand, 1042848 - 1042792
Alignment:
Q  344 tataacactaatggtgctctttttgggatatattggatatgtaatcgactaatcacc 400  Q
    ||||||||| |||||||||||||||| |||| |||  |||||||| |||||||||||    
T  1042848 tataacactgatggtgctctttttggtatattttgcgtatgtaattgactaatcacc 1042792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 308
Target Start/End: Complemental strand, 9283763 - 9283712
Alignment:
Q  257 ttaattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    |||| |||||||| |||||||||||||| | |||||||||||||| ||||||    
T  9283763 ttaactaaaataatttaactcttgagtaattatgtgttctttttttgatata 9283712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 308
Target Start/End: Original strand, 25969720 - 25969771
Alignment:
Q  257 ttaattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    |||| |||||||| |||||||||||||| | |||||||||||||| ||||||    
T  25969720 ttaactaaaataatttaactcttgagtaattatgtgttctttttttgatata 25969771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 8056379 - 8056333
Alignment:
Q  114 tttccgatatgtatcagaagagtatccaaagattaaattttattttt 160  Q
    ||||||||| ||||||| ||||||||  |||||||||||||||||||    
T  8056379 tttccgatacgtatcaggagagtatctgaagattaaattttattttt 8056333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 343 - 400
Target Start/End: Original strand, 4292005 - 4292062
Alignment:
Q  343 atataacactaatggtgctctttttgggatatattggatatgtaatcgactaatcacc 400  Q
    |||||||||| ||| |||||||||||| |||| |||  |||||||| |||||||||||    
T  4292005 atataacactgatgatgctctttttggtatattttgcgtatgtaattgactaatcacc 4292062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 18113979 - 18113938
Alignment:
Q  119 gatatgtatcagaagagtatccaaagattaaattttattttt 160  Q
    |||||||||||| ||||||||  |||||||||||||||||||    
T  18113979 gatatgtatcaggagagtatctgaagattaaattttattttt 18113938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 159
Target Start/End: Complemental strand, 27688051 - 27688010
Alignment:
Q  118 cgatatgtatcagaagagtatccaaagattaaattttatttt 159  Q
    ||||| |||| |||||||||||| ||||||||||||||||||    
T  27688051 cgatacgtataagaagagtatccgaagattaaattttatttt 27688010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 7416689 - 7416729
Alignment:
Q  119 gatatgtatcagaagagtatccaaagattaaattttatttt 159  Q
    |||| ||||||| ||||||||| ||||||||||||||||||    
T  7416689 gatacgtatcaggagagtatccgaagattaaattttatttt 7416729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 400
Target Start/End: Original strand, 8029147 - 8029203
Alignment:
Q  344 tataacactaatggtgctctttttgggatatattggatatgtaatcgactaatcacc 400  Q
    ||||||||| |||||||||||||||| |||| |||  |||||||  |||||||||||    
T  8029147 tataacactgatggtgctctttttggtatattttgcgtatgtaagtgactaatcacc 8029203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 118 - 154
Target Start/End: Original strand, 12086912 - 12086948
Alignment:
Q  118 cgatatgtatcagaagagtatccaaagattaaatttt 154  Q
    ||||||||||||| |||||||||| ||||||||||||    
T  12086912 cgatatgtatcaggagagtatccagagattaaatttt 12086948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 400
Target Start/End: Original strand, 19510929 - 19511010
Alignment:
Q  323 caatgttccttttggatataatataacact----aatggtgctctttttgggatatattggatatgtaatcgactaatcacc 400  Q
    |||||||||||||||||||| ||||||| |     |||||||||||||| | |||| |||  |||||||| |||||||||||    
T  19510929 caatgttccttttggatatagtataacattgatgtatggtgctcttttttgtatattttgagtatgtaattgactaatcacc 19511010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 98; Significance: 4e-48; HSPs: 82)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 42 - 308
Target Start/End: Complemental strand, 30787682 - 30787412
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgt----caattttccgatatgtatcagaagagta 137  Q
    ||||||||| |||||||||||||| || ||||||||||||| | |||| |||||| |||||||| |||    || || || |||| ||||||| ||||||    
T  30787682 tgtgaagccccgatacttcaaaatcgatgacgtatcgtatcccctgcgtatcctgtactgatacttgtttgacacttctc-gatacgtatcaggagagta 30787584  T
Q  138 tccaaagattaaattttatttttnnnnnnnntaa-aattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctg 236  Q
    ||| ||||||||||||||||||         ||| |||||||| |||||||| ||||||||||||||||||||| ||| |||||  ||||| ||||||||    
T  30787583 tccgaagattaaattttatttt--aaaaaaataataattatcctatacttcccgatacatatcaggagagtatccgataattatcatgcactgatatctg 30787486  T
Q  237 cctcgatatttctcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    || ||||| ||| |||||||  |||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  30787485 ccccgatacttcccaattaatgttaactaaaataacttaactcttgagtactgatgtgttattttttggatata 30787412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 42 - 308
Target Start/End: Complemental strand, 55269132 - 55268867
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtcaattttccgatatgtatcagaagagtatcca 141  Q
    ||||||||| ||||||||||||||||| ||||||||||||| | |||| ||||||||  ||||| ||  | ||  |||||| ||||||| |||||||||     
T  55269132 tgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcatcgatacctgatacttc-ccgatacgtatcaggagagtatccg 55269034  T
Q  142 aagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcg 241  Q
    |||||||||||||||||||        |||  ||||||||||||||| |||||  ||||||| |||||| ||| ||||| |||||  ||||||||||  |    
T  55269033 aagattaaattttatttttttaaaaaataa--ttatccgatacttcccgatacgcatcaggatagtatccgataattatcctgcattgatatctgccatg 55268936  T
Q  242 atatttctcaattaat--taattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    ||| ||| ||||||||  ||| ||||||||||||| ||||||||||||||||||| |||||||||||||    
T  55268935 atacttcccaattaatgttaactaaaataacttaagtcttgagtactgatgtgttattttttggatata 55268867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 44 - 301
Target Start/End: Complemental strand, 7899837 - 7899576
Alignment:
Q  44 tgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatg--tca-attttccgatatgtatcagaagagtatcc 140  Q
    ||||||||||||||||||||||||| |||| |  ||||| ||| || |||||||||  |||  ||  | | |||| |||||| |||||||||||||||||    
T  7899837 tgaagcctcgatacttcaaaatggatgacgaaatgtatctcttacgtatcctgcacctatatctgcttgatatttcccgatacgtatcagaagagtatcc 7899738  T
Q  141 aaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctc 240  Q
     |||||||||||||||||||         | ||||||||||||||||| ||||| |||| |||||||||||||| ||||| ||  || |||||||||| |    
T  7899737 gaagattaaattttatttttttacaaaa-ataattatccgatacttcccgatacgtatcgggagagtatctgatcattatcctatactgatatctgcccc 7899639  T
Q  241 gatatttctcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttctttttt 301  Q
    |||| ||| |||||||  |||| ||||||||||||||||||||||||||||||||||||||||    
T  7899638 gatacttcccaattaatgttaactaaaataacttaactcttgagtactgatgtgttctttttt 7899576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 42 - 301
Target Start/End: Complemental strand, 21157849 - 21157587
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtat 138  Q
    |||||||||  |||||||||||||||| ||||||||||||    || | |||||||| |||||  || |    | |||| |||| ||| ||| |||||||    
T  21157849 tgtgaagcccagatacttcaaaatggatgacgtatcgtattctctgtgcatcctgcattgataactgcccgatactttctgatacgtaccaggagagtat 21157750  T
Q  139 ccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcc 238  Q
    || |||||||||||||||||||        |||  ||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||| || |||||    
T  21157749 ccgaagattaaattttatttttttaaaaaataa--ttatccgatacttcctgatacgtatcaggagagtatctgataattatcctgcaccgctacctgcc 21157652  T
Q  239 tcgatatttctcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttctttttt 301  Q
     ||||| ||| |||||||  |||||||||||||||||||||| ||||| ||||||||||||||||    
T  21157651 ccgatagttcccaattaatgttaattaaaataacttaactctcgagtattgatgtgttctttttt 21157587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 44 - 308
Target Start/End: Original strand, 47642017 - 47642273
Alignment:
Q  44 tgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtcaattttccgatatgtatcagaagagtatccaaa 143  Q
    ||||||||||||||||||||||||| |||||| |||||| | |||| ||||||||| |||||        || || ||| ||||||||||||||||| ||    
T  47642017 tgaagcctcgatacttcaaaatggatgacgtaccgtatcccatgcgtatcctgcaccgatac--------ttcccaatacgtatcagaagagtatccgaa 47642108  T
Q  144 gattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgat 243  Q
    ||||||||||||||||         |||  ||||| ||||||||| ||||| ||||||||||||||| ||| ||||| || |||   |||||||| ||||    
T  47642109 gattaaattttattttataaaaaaataa--ttatctgatacttcccgatacgtatcaggagagtatccgatcattatcctacacaagtatctgccccgat 47642206  T
Q  244 atttctcaattaat--taattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    | ||  ||||||||  ||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  47642207 actttccaattaatgttaactaaaataacttaactcttgagtactgatgtgttcttttttgaatata 47642273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 45 - 308
Target Start/End: Original strand, 28968511 - 28968778
Alignment:
Q  45 gaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtatcca 141  Q
    |||||| ||||||||||||||||| |||||| | ||||  || || ||||||||| ||||| || |    | || |||||| |||||||||||||||||     
T  28968511 gaagccccgatacttcaaaatggatgacgtaccatatcctttacgtatcctgcaccgatacctgcccgatacttcccgatacgtatcagaagagtatccg 28968610  T
Q  142 aagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagta-tctgatgattattctgcaccgatatctgcctc 240  Q
    |||||||||||||||||||        |||  ||||||||||||||| ||||| ||||||||||||| || ||| ||||| || || || |||||||| |    
T  28968611 aagattaaattttatttttaaaaaaaataa--ttatccgatacttcccgatacgtatcaggagagtaatccgatcattatcctacatcggtatctgcccc 28968708  T
Q  241 gatatttctcaattaat--taattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    |||| ||| ||||||||  ||| ||||||||||||||||||||||| ||||||||||||||||| |||||    
T  28968709 gatacttcccaattaatgttaactaaaataacttaactcttgagtaatgatgtgttcttttttgaatata 28968778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 117 - 308
Target Start/End: Original strand, 19421492 - 19421683
Alignment:
Q  117 ccgatatgtatcagaagagtatccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatga 216  Q
    |||||| ||||||| ||||||||| |||||||||||||||||||        |||  ||||||||||||||| ||||| ||||||||| |||| |||| |    
T  19421492 ccgatacgtatcaggagagtatccgaagattaaattttatttttttaaaaagtaa--ttatccgatacttcccgatacgtatcaggagcgtatatgataa 19421589  T
Q  217 ttattctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    |||| ||||||||||| |||||  |||||||| |||||||  ||||  |||||||||||||||||||| |||||||| ||||||||||||||||    
T  19421590 ttatcctgcaccgatacctgccctgatatttcccaattaatgttaaccaaaataacttaactcttgagcactgatgtattcttttttggatata 19421683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 44 - 308
Target Start/End: Complemental strand, 6134500 - 6134233
Alignment:
Q  44 tgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtatcc 140  Q
    |||||||  |||||||||||||||| ||||||||||||| | |||| ||||||||| |||||||  |    | || |||||||||||||| |||||||||    
T  6134500 tgaagccctgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacatacctgatacttcccgatatgtatcaggagagtatcc 6134401  T
Q  141 aaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctc 240  Q
     |||||||||| ||||||||        |||  ||||||||||||||| ||||  ||||||||||||||  ||| ||||| ||||| |||||  ||||      
T  6134400 gaagattaaatattattttttaaaaaaataa--ttatccgatacttcccgatatttatcaggagagtattcgataattatcctgcatcgatacatgccct 6134303  T
Q  241 gatatttctcaattaat--taattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    | |||||| ||||||||  | | ||||||||||||||||||||||||||||||||| |||| ||||||||    
T  6134302 gttatttcccaattaatgttgactaaaataacttaactcttgagtactgatgtgtttttttatggatata 6134233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 41 - 308
Target Start/End: Complemental strand, 19879214 - 19878953
Alignment:
Q  41 ttgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtcaattttccgatatgtatcagaagagtatcc 140  Q
    |||||||||| | ||||||||||||||| |||||| |||||| | |||| ||||||||| ||||| || |       |||||||||| || |||||||||    
T  19879214 ttgtgaagccgcaatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcc-------cgatatgtataaggagagtatcc 19879122  T
Q  141 aaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctc 240  Q
     |||||| ||||||||||||        |||  ||||||||||||||| ||||| ||||| ||||||||  ||| ||||| |||||||| |  ||||| |    
T  19879121 gaagattcaattttattttttaaaaaaataa--ttatccgatacttcccgatacgtatcatgagagtattcgataattatcctgcaccgctgcctgcccc 19879024  T
Q  241 -gatatttctcaattaat--taattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
     |||| ||| ||||||||  ||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  19879023 cgatagttcccaattaatgttaactaaaataacttaactcttgagtactgatgtgttctttttttgatata 19878953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 38 - 398
Target Start/End: Complemental strand, 22289845 - 22289483
Alignment:
Q  38 catttgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatg--tca-attttccgatatgtatcagaaga 134  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||| | |||| |||||||||  |||| ||  | | | || | |||| ||||||| |||    
T  22289845 catttatgaagcctcgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccaatacctgcatgatacttcctgatacgtatcaggaga 22289746  T
Q  135 gtatccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatc 234  Q
    |||||| ||||||||||||||||| |        |  ||| ||| ||||||| || |||| ||||||||||||||||||| |||||  || ||||||| |    
T  22289745 gtatccgaagattaaattttatttctttaaaaaat--aatcatctgatactttctaatacgtatcaggagagtatctgataattatcatgtaccgatacc 22289648  T
Q  235 tgcctcgatatttctcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttc 330  Q
    ||||   ||| ||| |||||||  |||| ||||||||||||||| ||| ||| |  ||  |||||||||||||  |||||||| |  | ||||||||||     
T  22289647 tgccctaatacttcccaattaatgttaactaaaataacttaacttttgggta-tagtg-cttcttttttggatcgatatagtacaacactaacaatgttt 22289550  T
Q  331 cttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    |||||||||||| ||||||||| |||||| | ||||||||||||||| | |||||||| || ||||||    
T  22289549 cttttggatatagtataacacttatggtg-tttttttgggatatattcggtatgtaattgaataatca 22289483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 180 - 397
Target Start/End: Original strand, 29915929 - 29916148
Alignment:
Q  180 gatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataacttaactc 277  Q
    ||||||||| ||||| |||||||| |||||||||| ||||| ||||| |||||  |||| | ||| ||| ||||||||  ||| ||||||||||||||||    
T  29915929 gatacttcccgatacgtatcaggatagtatctgataattatcctgcatcgatacatgccccaatacttcccaattaatgttaactaaaataacttaactc 29916028  T
Q  278 ttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatata 375  Q
    || ||||  | ||  |||| |||| |||  ||||||||||  | ||||||||||| ||||||||||| ||||||||| |||||| |||||||||||||||    
T  29916029 tttagtatag-tgc-ttctgttttagatcgatatagtataacactaacaatgttcattttggatatagtataacactgatggtgttctttttgggatata 29916126  T
Q  376 ttggatatgtaatcgactaatc 397  Q
    |||  |||||||||||||||||    
T  29916127 ttgtttatgtaatcgactaatc 29916148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 180 - 397
Target Start/End: Original strand, 29965082 - 29965301
Alignment:
Q  180 gatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataacttaactc 277  Q
    ||||||||| ||||| |||||||| |||||||||| ||||| ||||| |||||  |||| | ||| ||| ||||||||  ||| ||||||||||||||||    
T  29965082 gatacttcccgatacgtatcaggatagtatctgataattatcctgcatcgatacatgccccaatacttcccaattaatgttaactaaaataacttaactc 29965181  T
Q  278 ttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatata 375  Q
    || ||||  | ||  |||| |||| |||  ||||||||||  | ||||||||||| ||||||||||| ||||||||| |||||| |||||||||||||||    
T  29965182 tttagtatag-tgc-ttctgttttagatcgatatagtataacactaacaatgttcattttggatatagtataacactgatggtgttctttttgggatata 29965279  T
Q  376 ttggatatgtaatcgactaatc 397  Q
    |||  |||||||||||||||||    
T  29965280 ttgtttatgtaatcgactaatc 29965301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 42 - 284
Target Start/End: Original strand, 45347297 - 45347541
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtat 138  Q
    ||||||||  ||||||||||||||||  ||| ||||||||| | |||  ||||||||||||||| || |    | ||| ||||| ||||| |||||||||    
T  45347297 tgtgaagctccgatacttcaaaatggttgac-tatcgtatcccctgct-atcctgcactgatacctgcccgatacttttcgatacgtatccgaagagtat 45347394  T
Q  139 ccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcc 238  Q
    || |||||||||||||||||||         | ||||||||||||||||||||||| |||||||| |||||||||| ||||| ||||||| |||||||||    
T  45347395 ccgaagattaaattttattttttttaaaaa-ataattatccgatacttcctgatacgtatcaggaaagtatctgataattatcctgcacctatatctgcc 45347493  T
Q  239 tcgatatttctcaattaa--ttaattaaaataacttaactcttgagta 284  Q
     | ||| |||||||||||  |||| ||||||||||||| |||||||||    
T  45347494 ccaataattctcaattaacgttaaataaaataacttaaatcttgagta 45347541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 178 - 308
Target Start/End: Complemental strand, 45057284 - 45057152
Alignment:
Q  178 ccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataacttaac 275  Q
    ||||||||||| ||||| ||||| ||||||||  ||| ||||| || ||| ||||||||||  |||||||| ||||||||  ||| ||||||||||||||    
T  45057284 ccgatacttcccgatacgtatcatgagagtattcgataattatcctacacagatatctgccctgatatttcccaattaatgttaactaaaataacttaac 45057185  T
Q  276 tcttgagtactgatgtgttcttttttggatata 308  Q
    ||||||||||| |||||||||||||||||||||    
T  45057184 tcttgagtactaatgtgttcttttttggatata 45057152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 172 - 301
Target Start/End: Original strand, 25700890 - 25701021
Alignment:
Q  172 aattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataa 269  Q
    ||||||||||||||||| ||||| ||||||||||||||| ||| ||||| |||||| ||| |||||| ||||| ||| |||||||  || | ||||||||    
T  25700890 aattatccgatacttcccgatacgtatcaggagagtatccgataattatcctgcactgatgtctgccccgatacttcccaattaatgtttactaaaataa 25700989  T
Q  270 cttaactcttgagtactgatgtgttctttttt 301  Q
    ||||||||||||||||| ||||||| ||||||    
T  25700990 cttaactcttgagtacttatgtgttttttttt 25701021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 180 - 308
Target Start/End: Complemental strand, 38889067 - 38888936
Alignment:
Q  180 gatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataacttaactc 277  Q
    ||||||||| ||| | ||||||||||||||| ||| ||||| |||| |  ||| ||||| |||||||||||||||||  |||| ||||||||||||||||    
T  38889067 gatacttcccgatgcgtatcaggagagtatccgataattatcctgctctaatacctgccccgatatttctcaattaatgttaactaaaataacttaactc 38888968  T
Q  278 ttgagtactgatgtg-ttcttttttggatata 308  Q
    |||||||||| |||| ||||||||||||||||    
T  38888967 ttgagtactggtgtgtttcttttttggatata 38888936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 41 - 378
Target Start/End: Original strand, 2122701 - 2123046
Alignment:
Q  41 ttgtgaagcctcgatacttcaaaatggaagacgtatcgtatcactt---gcggatcctgcactgatacatgtca---attttccgatatgtatcagaaga 134  Q
    |||||||||| ||||||||||||||||| ||||||| ||||| | |   ||| ||| ||||| ||||| || |    | || |||||| ||||||| |||    
T  2122701 ttgtgaagccccgatacttcaaaatggatgacgtattgtatcccctcctgcgtatcatgcaccgatacttgcctgatacttcccgatacgtatcaggaga 2122800  T
Q  135 gtatccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatc 234  Q
    | |||| ||||||||||||||||||          | ||||||| ||||||||  ||||| |||||| ||| |||| ||| ||||| |||||| | || |    
T  2122801 gaatccgaagattaaattttattttaaaaaaaaaaagaattatctgatacttcgcgatacgtatcagtagactatccgataattatcctgcactggtacc 2122900  T
Q  235 tgcctcgatatttctcaattaat--taattaaaataacttaactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttc 330  Q
    |||||| ||| ||  ||||||||  ||| |||||||||||||||||||||||  | ||  |||| ||||  ||  | |||||||| || ||||||| ||     
T  2122901 tgcctcaatactttccaattaatgttaactaaaataacttaactcttgagtatag-tgc-ttctatttttaatcaaaatagtataagactaacaatcttt 2122998  T
Q  331 cttttggatataatataacactaatggtgctctttttgggatatattg 378  Q
    |||||||||||||||||||||| ||| |||||||||||||||||||||    
T  2122999 cttttggatataatataacacttatgatgctctttttgggatatattg 2123046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 174 - 308
Target Start/End: Complemental strand, 13353182 - 13353046
Alignment:
Q  174 ttatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataact 271  Q
    ||||| ||||||||| ||||| ||||||||||||||| ||| || || ||||| ||||| |  |  ||||| |||  |||||||  ||| ||||||||||    
T  13353182 ttatctgatacttcccgatacgtatcaggagagtatccgataataatcctgcatcgatagcgactccgatacttcggaattaatgttaactaaaataact 13353083  T
Q  272 taactcttgagtactgatgtgttcttttttggatata 308  Q
    |||||||||||||||||||||||||||||| ||||||    
T  13353082 taactcttgagtactgatgtgttctttttttgatata 13353046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 44 - 284
Target Start/End: Complemental strand, 13748565 - 13748323
Alignment:
Q  44 tgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtatcc 140  Q
    ||||||| ||||||||||||||||  |||||||||||||   |||| ||||||||| ||||| || |    | ||||||||| |||||||||||||||||    
T  13748565 tgaagccccgatacttcaaaatggttgacgtatcgtatcctctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatcagaagagtatcc 13748466  T
Q  141 aaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctc 240  Q
     |||||||||||||||||||         | ||||||| ||||||||| ||||| |||||| | |||||| ||| |||||  || ||| ||| ||||| |    
T  13748465 gaagattaaattttattttttttaaa---ataattatctgatacttcccgatacgtatcagaaaagtatccgataattatcatgtacctatacctgcccc 13748369  T
Q  241 gatatttctcaattaa--ttaattaaaataacttaactcttgagta 284  Q
     ||| ||  |||||||  |||| |||||||| ||||||||||||||    
T  13748368 aataatttccaattaacgttaaataaaataatttaactcttgagta 13748323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 318 - 398
Target Start/End: Complemental strand, 25322336 - 25322256
Alignment:
Q  318 aataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||||||||||||||||||||| ||||||| | || |||||||||||||||||||||  ||||||||| |||||||||    
T  25322336 aataacaatgttccttttggatatagtataacattgatagtgctctttttgggatatattatatatgtaattgactaatca 25322256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 216 - 308
Target Start/End: Original strand, 983359 - 983453
Alignment:
Q  216 attattctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    ||||| |||||||| |||||||| ||||| ||| ||||||||  ||| ||||| ||||||||||||||||||| |||||||||||||||||||||    
T  983359 attatcctgcaccgctatctgccccgatagttcccaattaatgttaactaaaacaacttaactcttgagtacttatgtgttcttttttggatata 983453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 190 - 350
Target Start/End: Original strand, 42229811 - 42229973
Alignment:
Q  190 gatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataacttaactcttgagtactg 287  Q
    ||||| ||||||||||||||| ||| ||||| ||||||| ||| ||||| | ||| ||| |||||||  ||||||||||||||||||||||||||||       
T  42229811 gatacgtatcaggagagtatccgataattatcctgcaccaatacctgccccaatacttcccaattaatgttaattaaaataacttaactcttgagta--t 42229908  T
Q  288 atgtgttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataaca 350  Q
    ||   |||||||||| ||  ||||||||||  | ||||||| ||||||||||||||| |||||||    
T  42229909 attgcttcttttttgaatcgatatagtatagcactaacaatattccttttggatatagtataaca 42229973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 257 - 396
Target Start/End: Original strand, 28548260 - 28548401
Alignment:
Q  257 ttaattaaaataacttaactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataacactaa 354  Q
    |||| ||||||||||||||||||||||  | ||||||||||||||||||  |||||| |||  | ||||||||||| ||||| |||||  ||| |||| |    
T  28548260 ttaactaaaataacttaactcttgagtcttaatgtgttcttttttggatcgatatagcatagcactaacaatgttctttttgaatatagcatatcactga 28548359  T
Q  355 tggtgctctttttgggatatattggatatgtaatcgactaat 396  Q
    || ||||||||||| | |||| || ||||||||| |||||||    
T  28548360 tgttgctctttttgagttatagtgtatatgtaattgactaat 28548401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 306 - 400
Target Start/End: Original strand, 52684614 - 52684708
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatcacc 400  Q
    ||||||||||  | ||||||||||| ||||||||||| ||||||||  |||||||||||||||| ||||||||  |||||||| |||||||||||    
T  52684614 atatagtataacactaacaatgttctttttggatatagtataacaccgatggtgctctttttggtatatattgtgtatgtaattgactaatcacc 52684708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 306 - 398
Target Start/End: Original strand, 25701050 - 25701142
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||||||  | ||||||||||||||||||||||| |||| |||| | |||||||||||||||||||||||  | |||||| |||||||||    
T  25701050 atatagtataacactaacaatgttccttttggatatagtatagcactgacggtgctctttttgggatatattgtgtttgtaattgactaatca 25701142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 132 - 284
Target Start/End: Complemental strand, 41742099 - 41741947
Alignment:
Q  132 agagtatccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgat 231  Q
    ||||||||| |||||||||||||||||||        |||  ||||||| ||||||| ||||| ||||||||||||||| ||| ||||| |||||| |||    
T  41742099 agagtatccgaagattaaattttatttttaaaaaaaataa--ttatccggtacttcccgatacgtatcaggagagtatccgataattatcctgcactgat 41742002  T
Q  232 atctgcctcgatatttctcaattaa--ttaattaaaataacttaactcttgagta 284  Q
    |  |||| | ||| ||| |||||||  |||| |||||||||||||||||||||||    
T  41742001 acatgccccaatacttcccaattaatgttaagtaaaataacttaactcttgagta 41741947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 52 - 359
Target Start/End: Complemental strand, 19349700 - 19349404
Alignment:
Q  52 cgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtcaattttccgatatgtatcagaagagtatccaaagattaaat 151  Q
    ||||||||||||||||  ||||||||||||| | || | | ||||||||||||| || |       ||||| ||||||||||||||| | ||||||||||    
T  19349700 cgatacttcaaaatggttgacgtatcgtatctcctgtgtaacctgcactgatacctgcc-------cgatacgtatcagaagagtatacgaagattaaat 19349608  T
Q  152 tttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctca 251  Q
    ||| |||||         | |||||| |||||||||| ||||| |||||||| || ||| ||| ||||| ||||| |  || ||||| | ||| || |||    
T  19349607 ttttttttttca------ataattattcgatacttcccgatacgtatcaggaaagaatccgataattatcctgcatctttacctgccccaataattttca 19349514  T
Q  252 attaa--ttaattaaaataacttaactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttttggatataatata 347  Q
    |||||  |||| |||||||| |||||||||||||| |  ||  |||||||||||||  ||||||||||  | | |||||||| |||||||||||| ||||    
T  19349513 attaacgttaaataaaataatttaactcttgagta-tagtg-cttcttttttggatcgatatagtatagcactgacaatgtttcttttggatatagtata 19349416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 172 - 308
Target Start/End: Complemental strand, 20510145 - 20510007
Alignment:
Q  172 aattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataa 269  Q
    ||||||| ||||||||| ||||| |||||| | |||||  ||| ||||| ||||| ||||| ||||| | ||||||| ||||||||  | | ||||||||    
T  20510145 aattatctgatacttcccgatacttatcagaaaagtattcgataattatcctgcatcgatacctgccccaatatttcccaattaatgttgactaaaataa 20510046  T
Q  270 cttaactcttgagtactgatgtgttcttttttggatata 308  Q
    |||||||||||| || |||||| ||||||| ||||||||    
T  20510045 cttaactcttgaatagtgatgtattcttttatggatata 20510007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 52121178 - 52121299
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| ||||||||||||| | |||| |||||||||| |||| ||||    | ||  ||||| ||||| | |||||||    
T  52121178 tgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcactaatacctgtccgatacttctcgatacgtatcgggagagtat 52121277  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  52121278 ccaaatattaaattttattttt 52121299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 306 - 400
Target Start/End: Complemental strand, 21006194 - 21006100
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatcacc 400  Q
    ||||||||||  | ||||||||||| ||||||||||| |||| |||  |||||||||||||||| ||||||||  |||||||| |||||||||||    
T  21006194 atatagtataacactaacaatgttctttttggatatagtatagcaccgatggtgctctttttggtatatattgtgtatgtaattgactaatcacc 21006100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 291 - 378
Target Start/End: Original strand, 48333210 - 48333299
Alignment:
Q  291 tgttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattg 378  Q
    |||||||||||||||  ||||||||||  | ||||||| ||||||||||||||| ||||||||| |||||| |||||| |||||||||||    
T  48333210 tgttcttttttggatcgatatagtatagcactaacaatattccttttggatatagtataacactgatggtgttcttttcgggatatattg 48333299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 338 - 398
Target Start/End: Original strand, 19421741 - 19421801
Alignment:
Q  338 atataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    |||||||||| ||||||||||||||||||||||||||||||  |||||||| |||||||||    
T  19421741 atataatatagcactaatggtgctctttttgggatatattgtgtatgtaattgactaatca 19421801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 293 - 398
Target Start/End: Complemental strand, 20510002 - 20509895
Alignment:
Q  293 ttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcg 390  Q
    |||||||||||||  | ||||||||  | ||||||||||| ||||||||||| |||| || | ||||||||| |||||||||||||||  |||||||| |    
T  20510002 ttcttttttggatcgacatagtataacactaacaatgttcattttggatatagtatatcattgatggtgctccttttgggatatattgtgtatgtaattg 20509903  T
Q  391 actaatca 398  Q
    ||||||||    
T  20509902 actaatca 20509895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 41 - 160
Target Start/End: Original strand, 35389747 - 35389869
Alignment:
Q  41 ttgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagta 137  Q
    |||||||||| ||||||||||||||||| |||||| |||||| | |||| ||||||||| ||||| || |    | || |||||| ||||| | ||||||    
T  35389747 ttgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatcgggagagta 35389846  T
Q  138 tccaaagattaaattttattttt 160  Q
    |||||| ||||||||||||||||    
T  35389847 tccaaatattaaattttattttt 35389869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 257 - 308
Target Start/End: Complemental strand, 2567171 - 2567120
Alignment:
Q  257 ttaattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  2567171 ttaactaaaataacttaactcttgagtactgatgtgttcttttttcgatata 2567120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 40497328 - 40497449
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| |||||| |||||| | |||| ||||||||| ||||| || |    | || |||||| ||||| | |||||||    
T  40497328 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacttgcccgatacttcccgatacgtatccggagagtat 40497427  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  40497428 ccaaatattaaattttattttt 40497449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 306 - 388
Target Start/End: Complemental strand, 7899550 - 7899468
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaat 388  Q
    ||||||||||  | || ||||||| ||||||||| || ||||||||| |||||||||||||||||||||||||  ||||||||    
T  7899550 atatagtatagcactagcaatgtttcttttggatgtagtataacactgatggtgctctttttgggatatattgtgtatgtaat 7899468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 43 - 160
Target Start/End: Original strand, 52684200 - 52684320
Alignment:
Q  43 gtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtatc 139  Q
    |||||||  |||||||||||||| || ||||||||||||| | |||| ||||||||| ||||| ||||    | ||||||||| |||| || ||||||||    
T  52684200 gtgaagctccgatacttcaaaatagatgacgtatcgtatctcatgcgtatcctgcaccgatacctgtccgatactttccgatacgtattaggagagtatc 52684299  T
Q  140 caaagattaaattttattttt 160  Q
    | || ||||||||||||||||    
T  52684300 cgaatattaaattttattttt 52684320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 10225271 - 10225161
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtcaattttccgatatgtatcagaagagtatcca 141  Q
    |||||||||  ||||||| |||||||| ||||||||||||| | |||| ||||||||| |||||        ||||||||| ||||| | ||||||||||    
T  10225271 tgtgaagccctgatactttaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatac--------tttccgatacgtatccggagagtatcca 10225180  T
Q  142 aagattaaattttattttt 160  Q
    || ||||||||||||||||    
T  10225179 aatattaaattttattttt 10225161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 160
Target Start/End: Original strand, 48122825 - 48122944
Alignment:
Q  44 tgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtatcc 140  Q
    ||||||| ||||||||||||||||| |||||| |||||| | |||  ||||||||| |||||||| |    |||| |||||| |||||   |||||||||    
T  48122825 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcatatcctgcaccgatacatgcccgatatttcccgatacgtatccagagagtatcc 48122924  T
Q  141 aaagattaaattttattttt 160  Q
    ||| ||||||||||||||||    
T  48122925 aaatattaaattttattttt 48122944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 320 - 396
Target Start/End: Complemental strand, 13353012 - 13352936
Alignment:
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaat 396  Q
    ||||||||||||||||||||||| |||| || |||||||| | ||||| ||||||||||  |||||||| |||||||    
T  13353012 taacaatgttccttttggatatagtatatcattaatggtgttgtttttaggatatattgtgtatgtaattgactaat 13352936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 320 - 388
Target Start/End: Original strand, 28968812 - 28968880
Alignment:
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaat 388  Q
    ||||||||||| ||||||||||| ||||||| | ||| |||||||||||||||||||||  ||||||||    
T  28968812 taacaatgttcattttggatatagtataacattgatgatgctctttttgggatatattgtgtatgtaat 28968880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 293 - 378
Target Start/End: Original strand, 48334155 - 48334242
Alignment:
Q  293 ttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattg 378  Q
    |||||||||||||  ||||||||||  | ||||||||||| ||||||||||| ||||||||  |||||| |||||| |||||||||||    
T  48334155 ttcttttttggatcgatatagtatagcactaacaatgttctttttggatatagtataacacggatggtgttcttttcgggatatattg 48334242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 7327710 - 7327831
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| |||||| |||||| | |||| ||||||||| ||||| || |    | || |||||| ||||| | | |||||    
T  7327710 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggatagtat 7327809  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  7327810 ccaaatattaaattttattttt 7327831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 28704725 - 28704846
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| |||||||| |||||||| |||||| |||||| | |||  ||||||||||||||| | ||    | ||||| ||||||||| | |||||||    
T  28704725 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcatatcctgcactgatacctatccgatactttccaatatgtatccggagagtat 28704824  T
Q  139 ccaaagattaaattttattttt 160  Q
    | ||| ||||||||||||||||    
T  28704825 caaaatattaaattttattttt 28704846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 37996931 - 37996810
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtat 138  Q
    ||||||||| |||||||| |||||||| |||||| |||||| | |||| ||||||||| || || || |    |||| |||||| ||||| | |||||||    
T  37996931 tgtgaagccccgatactttaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgagacctgcccgatatttcccgatacgtatccggagagtat 37996832  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  37996831 ccaaatattaaattttattttt 37996810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 322 - 400
Target Start/End: Complemental strand, 2567084 - 2567006
Alignment:
Q  322 acaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatcacc 400  Q
    ||||||||| |||||||||||  ||| |||  |||||||||||||||| ||||||||  |||||||| |||||||||||    
T  2567084 acaatgttctttttggatatagcatagcaccgatggtgctctttttggtatatattgtgtatgtaattgactaatcacc 2567006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 320 - 398
Target Start/End: Complemental strand, 19878919 - 19878842
Alignment:
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||| ||||||||||||||| |||| ||||  ||||||||||||| ||||||||||  |||||||| |||||||||    
T  19878919 taacaatattccttttggatatattatagcactggtggtgctcttttt-ggatatattgtgtatgtaattgactaatca 19878842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 43 - 160
Target Start/End: Complemental strand, 28882797 - 28882677
Alignment:
Q  43 gtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtatc 139  Q
    |||||||  ||||||||||||||||| |||||| |||||| | |||| ||| ||||| |||| ||| |    | ||||||||| ||||| | ||||||||    
T  28882797 gtgaagctccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcatgcaccgatatatgcccgatactttccgatacgtatcgggagagtatc 28882698  T
Q  140 caaagattaaattttattttt 160  Q
    |||| ||||||||||||||||    
T  28882697 caaatattaaattttattttt 28882677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 320 - 398
Target Start/End: Complemental strand, 45057118 - 45057040
Alignment:
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    |||||||||| |||||| ||||| |||| ||||  ||||||||||||| ||||||||||  |||||||| |||||||||    
T  45057118 taacaatgtttcttttgtatatagtatagcactgctggtgctctttttaggatatattgtgtatgtaattgactaatca 45057040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 51 - 158
Target Start/End: Original strand, 983201 - 983311
Alignment:
Q  51 tcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtatccaaagatt 147  Q
    |||||| ||||||||||| ||||||||||||| | || | ||  ||||||||||  ||||    | || |||||| ||||||| ||||||||||||||||    
T  983201 tcgataattcaaaatggatgacgtatcgtatcccctgtgtattttgcactgatatctgtctgatacttcccgatacgtatcaggagagtatccaaagatt 983300  T
Q  148 aaattttattt 158  Q
    |||||||||||    
T  983301 aaattttattt 983311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 43 - 99
Target Start/End: Original strand, 19420904 - 19420960
Alignment:
Q  43 gtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcac 99  Q
    |||||||| ||||||||||||||||| ||||||||||||| | |||| |||||||||    
T  19420904 gtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcac 19420960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 22611494 - 22611383
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtcaattttccgatatgtatcagaagagtatcca 141  Q
    ||||||||| ||||||||||||||||| |||||| |||||| | ||||  |||||||| ||||| ||        |||||| ||||| | ||||||||||    
T  22611494 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtttcctgcaccgatacctg-------cccgatacgtatccggagagtatcca 22611402  T
Q  142 aagattaaattttattttt 160  Q
    || ||||||||||||||||    
T  22611401 aatattaaattttattttt 22611383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 388
Target Start/End: Original strand, 47642307 - 47642375
Alignment:
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaat 388  Q
    ||||||||||| ||||||||||| ||||||| | ||| ||||||||||| |||||||||  ||||||||    
T  47642307 taacaatgttctttttggatatagtataacattgatgatgctctttttgtgatatattgtgtatgtaat 47642375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 230 - 306
Target Start/End: Original strand, 212693 - 212771
Alignment:
Q  230 atatctgcctcgatatttctcaattaatt--aattaaaataacttaactcttgagtactgatgtgttcttttttggata 306  Q
    ||||||||| || ||||| |||||||||   || |||||| | |||||||||||||| |||||||||||||||||||||    
T  212693 atatctgccccggtatttttcaattaatgtcaactaaaattatttaactcttgagtattgatgtgttcttttttggata 212771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 293 - 400
Target Start/End: Original strand, 22311115 - 22311235
Alignment:
Q  293 ttcttttttggat--atatagtatatgaataacaatgttccttttggatata-----------atataacactaatggtgctctttttgggatatattgg 379  Q
    |||||||||||||  ||||||||||  | |||||||||||||||||||||||           |||||||||| |||||||||||||||| |||| |||     
T  22311115 ttcttttttggatcgatatagtatagcattaacaatgttccttttggatatagtataacattgatataacactgatggtgctctttttggtatatcttgt 22311214  T
Q  380 atatgtaatcgactaatcacc 400  Q
     |||||||| |||||||||||    
T  22311215 gtatgtaattgactaatcacc 22311235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 28882349 - 28882292
Alignment:
Q  343 atataacactaatggtgctctttttgggatatattggatatgtaatcgactaatcacc 400  Q
    |||||||||| |||||||||||||||| |||| |||  |||||||| |||||||||||    
T  28882349 atataacactgatggtgctctttttggtatattttgcgtatgtaattgactaatcacc 28882292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 50287016 - 50286959
Alignment:
Q  343 atataacactaatggtgctctttttgggatatattggatatgtaatcgactaatcacc 400  Q
    |||||||||| |||||||||||||||| |||| |||  |||||||| |||||||||||    
T  50287016 atataacactgatggtgctctttttggtatattttgcgtatgtaattgactaatcacc 50286959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 396
Target Start/End: Complemental strand, 1678948 - 1678896
Alignment:
Q  344 tataacactaatggtgctctttttgggatatattggatatgtaatcgactaat 396  Q
    ||||||||| |||||||||||||||| ||||||||  |||||||| |||||||    
T  1678948 tataacactgatggtgctctttttggtatatattgcgtatgtaattgactaat 1678896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 396
Target Start/End: Complemental strand, 25936346 - 25936294
Alignment:
Q  344 tataacactaatggtgctctttttgggatatattggatatgtaatcgactaat 396  Q
    |||| ||||||||||||||||||||| ||||||||  |||||||| |||||||    
T  25936346 tatagcactaatggtgctctttttggtatatattgcgtatgtaattgactaat 25936294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 350
Target Start/End: Original strand, 35390135 - 35390194
Alignment:
Q  293 ttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataaca 350  Q
    |||||||||||||  ||||||||||  | ||||||||||||||||||||||| |||||||    
T  35390135 ttcttttttggatcgatatagtataacattaacaatgttccttttggatatagtataaca 35390194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 49419245 - 49419289
Alignment:
Q  54 atacttcaaaatggaagacgtatcgtatcacttgcggatcctgca 98  Q
    ||||||||||||||| ||||||||||||| |||||| ||||||||    
T  49419245 atacttcaaaatggatgacgtatcgtatcccttgcgtatcctgca 49419289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 52505880 - 52505832
Alignment:
Q  112 attttccgatatgtatcagaagagtatccaaagattaaattttattttt 160  Q
    |||| |||||| ||||| |||||||||||||| ||||||||||||||||    
T  52505880 atttcccgatacgtatccgaagagtatccaaatattaaattttattttt 52505832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 327 - 398
Target Start/End: Original strand, 983478 - 983549
Alignment:
Q  327 gttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    |||||||||||| ||| |||| |||| ||||||||||||||  |||||||||  |||||||| || ||||||    
T  983478 gttccttttggacatagtatagcactgatggtgctctttttatgatatattgtgtatgtaattgattaatca 983549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 160
Target Start/End: Original strand, 3983773 - 3983816
Alignment:
Q  117 ccgatatgtatcagaagagtatccaaagattaaattttattttt 160  Q
    |||||| ||||||| ||||||||| |||||||||||||||||||    
T  3983773 ccgatacgtatcaggagagtatccgaagattaaattttattttt 3983816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 308
Target Start/End: Complemental strand, 21006265 - 21006214
Alignment:
Q  257 ttaattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    |||| ||||||||||||||| |||||||  ||||||||||||||| ||||||    
T  21006265 ttaaataaaataacttaactattgagtatcgatgtgttcttttttcgatata 21006214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 160
Target Start/End: Complemental strand, 45533022 - 45532979
Alignment:
Q  117 ccgatatgtatcagaagagtatccaaagattaaattttattttt 160  Q
    |||||| ||||| |||||||||||||| ||||||||||||||||    
T  45533022 ccgatacgtatccgaagagtatccaaatattaaattttattttt 45532979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 398
Target Start/End: Complemental strand, 47750750 - 47750672
Alignment:
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggat-atattggatatgtaatcgactaatca 398  Q
    ||||||| ||||||||||||||| ||||| | | ||||||||| ||||||||| |||||| ||||||||| || ||||||    
T  47750750 taacaatattccttttggatatagtataatattgatggtgctc-ttttgggataatattgtatatgtaattgattaatca 47750672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 257 - 308
Target Start/End: Original strand, 52684543 - 52684594
Alignment:
Q  257 ttaattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    |||| |||||||||| |||| ||||||||| |||||||||||||| ||||||    
T  52684543 ttaactaaaataactcaactattgagtactaatgtgttcttttttcgatata 52684594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 105
Target Start/End: Complemental strand, 2567497 - 2567444
Alignment:
Q  52 cgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatac 105  Q
    ||||||||||||||||| ||||||||||||  | |||| ||||||||| |||||    
T  2567497 cgatacttcaaaatggatgacgtatcgtatttcctgcgtatcctgcaccgatac 2567444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 308
Target Start/End: Complemental strand, 22610650 - 22610614
Alignment:
Q  271 ttaactcttgagtactgatgtgttcttttttggatata 308  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  22610650 ttaactctt-agtactgatgtgttcttttttggatata 22610614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 308
Target Start/End: Complemental strand, 25936452 - 25936416
Alignment:
Q  271 ttaactcttgagtactgatgtgttcttttttggatata 308  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  25936452 ttaactctt-agtactgatgtgttcttttttggatata 25936416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 110
Target Start/End: Original strand, 29915858 - 29915927
Alignment:
Q  41 ttgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc 110  Q
    |||||||| | |||||||||||||| || ||||||||||||| | |||| ||| ||||| ||||| ||||    
T  29915858 ttgtgaagtcccgatacttcaaaatagatgacgtatcgtatcccctgcgtatcatgcaccgatacctgtc 29915927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 41 - 110
Target Start/End: Original strand, 29965011 - 29965080
Alignment:
Q  41 ttgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc 110  Q
    |||||||| | |||||||||||||| || ||||||||||||| | |||| ||| ||||| ||||| ||||    
T  29965011 ttgtgaagtcccgatacttcaaaatagatgacgtatcgtatcccctgcgtatcatgcaccgatacctgtc 29965080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 119 - 160
Target Start/End: Original strand, 42229752 - 42229793
Alignment:
Q  119 gatatgtatcagaagagtatccaaagattaaattttattttt 160  Q
    |||| ||||||||||||||||| || ||||||||||||||||    
T  42229752 gatacgtatcagaagagtatccgaaaattaaattttattttt 42229793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 308
Target Start/End: Complemental strand, 45532436 - 45532400
Alignment:
Q  271 ttaactcttgagtactgatgtgttcttttttggatata 308  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  45532436 ttaactctt-agtactgatgtgttcttttttggatata 45532400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 388
Target Start/End: Original strand, 7328075 - 7328119
Alignment:
Q  344 tataacactaatggtgctctttttgggatatattggatatgtaat 388  Q
    |||||||||| ||||||||||||||| ||||||||  ||||||||    
T  7328075 tataacactactggtgctctttttggtatatattgcgtatgtaat 7328119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 388
Target Start/End: Original strand, 28705591 - 28705635
Alignment:
Q  344 tataacactaatggtgctctttttgggatatattggatatgtaat 388  Q
    ||||||| | |||||||||||||||| |||||||| |||||||||    
T  28705591 tataacattgatggtgctctttttggtatatattgcatatgtaat 28705635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 82
Target Start/End: Complemental strand, 38889199 - 38889159
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatc 82  Q
    |||||||||  |||||||||||||||| |||||||||||||    
T  38889199 tgtgaagccctgatacttcaaaatggatgacgtatcgtatc 38889159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 396
Target Start/End: Complemental strand, 42464408 - 42464356
Alignment:
Q  344 tataacactaatggtgctctttttgggatatattggatatgtaatcgactaat 396  Q
    ||||||||| ||| |||||||||||| ||||||||  |||||||| |||||||    
T  42464408 tataacactgatgatgctctttttggtatatattgcgtatgtaattgactaat 42464356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 396
Target Start/End: Original strand, 48123675 - 48123727
Alignment:
Q  344 tataacactaatggtgctctttttgggatatattggatatgtaatcgactaat 396  Q
    |||| |||| |||||||||||||||| ||||||||  |||||||| |||||||    
T  48123675 tatagcactgatggtgctctttttggtatatattgcgtatgtaattgactaat 48123727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 396
Target Start/End: Complemental strand, 52505091 - 52505039
Alignment:
Q  344 tataacactaatggtgctctttttgggatatattggatatgtaatcgactaat 396  Q
    |||| ||||||||||||||||||| | ||||||||  |||||||| |||||||    
T  52505091 tatagcactaatggtgctctttttagtatatattgcgtatgtaattgactaat 52505039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 92; Significance: 2e-44; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 114 - 397
Target Start/End: Original strand, 19128226 - 19128510
Alignment:
Q  114 tttccgatatgtatcagaagagtatccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctga 213  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||||        |||  ||||||||||||||| ||||| |||||||| |||||| ||    
T  19128226 tttccgatacgtatcagaagagtatccgaagattaaattttattttttttaaaaataa--ttatccgatacttcccgatacgtatcaggaaagtatccga 19128323  T
Q  214 tgattattctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttcttttttggat--atat 309  Q
    | ||||| || |||| || |||||| ||||| ||| |||||||  |||| ||||||||||||||||||||||| |  ||  |||||||||||||  ||||    
T  19128324 taattatccttcacctatgtctgccccgataattcccaattaacgttaaataaaataacttaactcttgagta-tagtg-cttcttttttggatcgatat 19128421  T
Q  310 agtatatgaataacaatgttccttttggatataatataacactaatggtgc-tctttttgggatatattggatatgtaatcgactaatc 397  Q
    ||||||  | |||||||||| |||||||||||| ||||||||| ||||||| | ||||| ||||||||||  |||||||| ||||||||    
T  19128422 agtatagcactaacaatgtttcttttggatatagtataacacttatggtgctttttttttggatatattgtgtatgtaattgactaatc 19128510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 42 - 308
Target Start/End: Original strand, 7254928 - 7255188
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtcaattttccgatatgtatcagaagagtatcca 141  Q
    |||||||| |||||||||||||||||| || |||||||||| | || | ||| ||||| |||||||| |       ||||| |||||||||||||||||     
T  7254928 tgtgaagcttcgatacttcaaaatggacgatgtatcgtatcccctgtgtatcatgcaccgatacatgcc-------cgatacgtatcagaagagtatccg 7255020  T
Q  142 aagattaaattttatttttnnnnnnnntaa-aattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctc 240  Q
    |||||||||||||||||          ||| ||||||| ||||||||| ||||| ||||||||||||||| ||| | |||  |||||||||| ||||| |    
T  7255021 aagattaaattttattt--aaaaataataataattatctgatacttcccgatacgtatcaggagagtatccgataagtatcatgcaccgatacctgcccc 7255118  T
Q  241 gatatttctcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    |||||||  |||||||  |||| | ||||||||||||||||||||||||||||||| |||||| ||||||    
T  7255119 gatattttccaattaatgttaacttaaataacttaactcttgagtactgatgtgttatttttttgatata 7255188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 42 - 395
Target Start/End: Original strand, 27083983 - 27084328
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatg-tcaat--tttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| ||||||||||||| | |||| ||||||||| ||||| || |||||  || || ||| |||| || |||||||    
T  27083983 tgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgctcaatacttcccaatacgtataaggagagtat 27084082  T
Q  139 ccaaagattaaattttatttttnnnnnnnntaaaattatccgatactt-cctgatacatatcaggagagtatctgatgattattctgcaccgatatctgc 237  Q
    ||||||||||||||||||||           |||| ||    ||| || || ||||| |||||||| | |||||||| |||||| ||||| |||| ||||    
T  27084083 ccaaagattaaattttattt----------aaaaaata----ataattacccgatacgtatcaggaaaatatctgataattattttgcactgataactgc 27084168  T
Q  238 ctcgatatttctcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttcctt 333  Q
    | | ||| ||| |||||||  |||| ||||||||||||||||||||||| |  ||  |||||||||| ||  ||||||||||  | ||||||||||||||    
T  27084169 ccccatacttcccaattaatgttaactaaaataacttaactcttgagta-tagtg-cttcttttttgaatcgatatagtatagaactaacaatgttcctt 27084266  T
Q  334 ttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaa 395  Q
    | ||||||| ||||||||| ||| |||||||||||||||||||||  |||||||| ||||||    
T  27084267 tcggatatagtataacacttatgatgctctttttgggatatattgtgtatgtaattgactaa 27084328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 111 - 308
Target Start/End: Complemental strand, 10894569 - 10894370
Alignment:
Q  111 aattttccgatatgtatcagaagagtatccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatc 210  Q
    |||| ||||||| ||||||| ||||||||| ||||||||||||| |||||           |||||| ||||||||||| |||| |||||||||||||||    
T  10894569 aattatccgatacgtatcaggagagtatccgaagattaaattttgtttttttttttaaattaattattcgatacttcctaatacgtatcaggagagtatc 10894470  T
Q  211 tgatgattattctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
     ||| ||||| ||||||||||| || || ||||||||| |||||||  |||| |||||| |||||||||| ||||| ||||||||||||| |||||||||    
T  10894469 cgataattatcctgcaccgatacctaccccgatatttcccaattaatgttaactaaaattacttaactctcgagtattgatgtgttctttgttggatata 10894370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 172 - 308
Target Start/End: Original strand, 31079731 - 31079866
Alignment:
Q  172 aattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaattaattaaaataact 271  Q
    ||||||| ||||||||| ||||| ||||||||||||||| |||||||||  |||||||||| ||||  ||||||||| |||||  |||| ||||||||||    
T  31079731 aattatctgatacttcccgatacgtatcaggagagtatccgatgattatcatgcaccgatacctgctccgatatttcccaatt-gttaactaaaataact 31079829  T
Q  272 taactcttgagtactgatgtgttcttttttggatata 308  Q
    ||| |||||| ||||||||||||||||||||||||||    
T  31079830 taaatcttgaatactgatgtgttcttttttggatata 31079866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 42 - 257
Target Start/End: Original strand, 26327153 - 26327368
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| ||||||||||||| | || | ||||||||| ||||| || |    | || |||||| |||| ||| ||||||    
T  26327153 tgtgaagccccgatacttcaaaatggatgacgtatcgtatctcctgtgtatcctgcaccgatacctgcccgatacttcccgatacgtataaga-gagtat 26327251  T
Q  139 ccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcc 238  Q
    || |||||||||||||||||||        |||  ||||||||||||||| ||||| |||| | |||||||  ||||||||| ||||||||||| |||||    
T  26327252 ccgaagattaaattttatttttaaaaaaaataa--ttatccgatacttcccgatacttatctgaagagtattcgatgattatcctgcaccgatacctgcc 26327349  T
Q  239 tcgatatttctcaattaat 257  Q
     ||||||||| ||||||||    
T  26327350 ccgatatttcgcaattaat 26327368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 44 - 359
Target Start/End: Original strand, 234306 - 234627
Alignment:
Q  44 tgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtatcc 140  Q
    ||||||| ||||||||||||||||  ||||||||||||| | |||| ||||||||| ||||| || |    | ||||||||| |||||||||||||||||    
T  234306 tgaagccccgatacttcaaaatggttgacgtatcgtatctcctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatcagaagagtatcc 234405  T
Q  141 aaagattaaattttatttttnnnnnnnntaa-aattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcct 239  Q
     |||||||| |||| |||||         || ||||||||||||||||| ||||  | |||||| |||||| ||| |||||  || | | ||| |||||     
T  234406 gaagattaactttttttttttttttttaaaataattatccgatacttcccgatatgtttcaggaaagtatccgataattatcttgaatctatacctgccc 234505  T
Q  240 cgatatttctcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttcctttt 335  Q
    | ||| ||  |||||||  |||| ||||||||||||||||||||||| |  ||  |||||||||||||  ||||||||||  | | |||||||| |||||    
T  234506 caataatttccaattaacgttaaataaaataacttaactcttgagta-tagtg-cttcttttttggatcgatatagtatagcactgacaatgtttctttt 234603  T
Q  336 ggatataatataacactaatggtg 359  Q
    ||||||| ||||||||| ||||||    
T  234604 ggatatagtataacacttatggtg 234627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 114 - 308
Target Start/End: Complemental strand, 6708086 - 6707892
Alignment:
Q  114 tttccgatatgtatcagaagagtatccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctga 213  Q
    ||||| ||||||||||| ||||||||| |||||||||| |||||||         |||  ||||||||||||||| ||||| |||||| |||||||  ||    
T  6708086 tttccaatatgtatcaggagagtatccgaagattaaatattattttaaaaaaaaataa--ttatccgatacttcccgatacttatcagaagagtattcga 6707989  T
Q  214 tgattattctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    | ||||  | ||||||||| ||||| || |||| | ||||||||  | | ||||||||||||||||||||||| |||||||||||||| ||||||||    
T  6707988 taattacccagcaccgatacctgccccgttattccccaattaatgttgactaaaataacttaactcttgagtattgatgtgttcttttatggatata 6707892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 257 - 378
Target Start/End: Complemental strand, 22989008 - 22988885
Alignment:
Q  257 ttaattaaaataactt-aactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataacacta 353  Q
    |||| ||||||||||| |||||||||| || |||||||||||||||||||  ||||||||||  | ||||||||||||||||||||| | |||||||||     
T  22989008 ttaactaaaataactttaactcttgagaac-gatgtgttcttttttggatcgatatagtatagcactaacaatgttccttttggatacagtataacactg 22988910  T
Q  354 atggtgctctttttgggatatattg 378  Q
    |||||| || |||||||||||||||    
T  22988909 atggtgttccttttgggatatattg 22988885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 257 - 378
Target Start/End: Original strand, 23799388 - 23799511
Alignment:
Q  257 ttaattaaaataactt-aactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataacacta 353  Q
    |||| ||||||||||| |||||||||| || |||||||||||||||||||  ||||||||||  | ||||||||||||||||||||| | |||||||||     
T  23799388 ttaactaaaataactttaactcttgagaac-gatgtgttcttttttggatcgatatagtatagcactaacaatgttccttttggatacagtataacactg 23799486  T
Q  354 atggtgctctttttgggatatattg 378  Q
    |||||| || |||||||||||||||    
T  23799487 atggtgttccttttgggatatattg 23799511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 53 - 301
Target Start/End: Complemental strand, 13607894 - 13607643
Alignment:
Q  53 gatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc-aat--tttccgatatgtatcagaagagtatccaaagattaa 149  Q
    |||||||||||||||| |||||||||||||   |||  ||||||||||||||| || | |||  |||| |||| ||||||| ||||||||| ||||||||    
T  13607894 gatacttcaaaatggatgacgtatcgtatcctctgcatatcctgcactgatacctgcctaataatttctgatacgtatcaggagagtatccgaagattaa 13607795  T
Q  150 attttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttct 249  Q
     |||  ||| |        |||  ||||  ||||||||| ||||| |||||||| ||||| |||| ||||| || |||||||| ||||| | |||||| |    
T  13607794 ctttattttattttataaataa--ttatatgatacttcccgatacgtatcaggatagtatatgataattatcctacaccgatacctgccccaatattttt 13607697  T
Q  250 caattaat--taattaaaataacttaactcttgagtactgatgtgttctttttt 301  Q
    ||||||||  ||| ||||||||||||| ||||||||| ||||||||| ||||||    
T  13607696 caattaatgttaactaaaataacttaattcttgagtattgatgtgttttttttt 13607643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 321 - 398
Target Start/End: Original strand, 3299339 - 3299416
Alignment:
Q  321 aacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    |||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||  |||||||| |||||||||    
T  3299339 aacaatgttccttttggatatattatagcactgatggtgctctttttgggatatattgtgtatgtaattgactaatca 3299416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 178 - 287
Target Start/End: Complemental strand, 13045359 - 13045248
Alignment:
Q  178 ccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataacttaac 275  Q
    ||||||||| ||||||  |||||||||| |||||||| | ||| ||||||||||||||||| | ||||||| |||||||  | || ||||||||||||||    
T  13045359 ccgatactttctgataagtatcaggagaatatctgataactatcctgcaccgatatctgccccaatatttcccaattaatgtcaactaaaataacttaac 13045260  T
Q  276 tcttgagtactg 287  Q
    ||||||||||||    
T  13045259 tcttgagtactg 13045248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 53 - 377
Target Start/End: Original strand, 11105295 - 11105645
Alignment:
Q  53 gatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgt-caat--tttccgatatgtatcagaagagtatccaaagattaa 149  Q
    ||||||| |||||||| |||||| |||||   ||||| ||||||||  ||||||||| | ||  |||| |||| ||||||||||| ||| | ||||||||    
T  11105295 gatactttaaaatggatgacgtaccgtattctttgcgtatcctgcatcgatacatgttcgatactttctgatacgtatcagaagaatattcgaagattaa 11105394  T
Q  150 attttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttct 249  Q
    |||||||||||        |||  |||| ||||||||||  ||||||||||  |||||||| ||| ||||| || || |||||||| |  ||||| ||||    
T  11105395 attttatttttttaaaaaataa--ttattcgatacttccgtatacatatcaaaagagtatccgatcattatcctacaacgatatcttctccgatacttct 11105492  T
Q  250 caattaat--taattaaaataacttaactcttgagtactgatgtgttctttt---------------------ttggat--atatagtatatgaataaca 324  Q
    ||||||||  ||| |||||||| |||| ||||||||| |||| |||||||||                     ||||||  ||||||||||  | |||||    
T  11105493 caattaatgttaaataaaataaattaattcttgagtattgatatgttcttttttttaatacagtgcttctcttttggattgatatagtataacactaaca 11105592  T
Q  325 atgttccttttggatataatataacactaatggtgctctttttgggatatatt 377  Q
    |||||| |||||||||||| |||||||| ||||||||||||||||||||||||    
T  11105593 atgttcattttggatataaaataacactgatggtgctctttttgggatatatt 11105645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 41 - 160
Target Start/End: Complemental strand, 32130780 - 32130658
Alignment:
Q  41 ttgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagta 137  Q
    |||||||||| |||||||| |||||| | |||||| |||||| | |||| ||||||||||||||| |||     |||| |||||| ||||||| ||||||    
T  32130780 ttgtgaagccccgatactttaaaatgaatgacgtaccgtatcccctgcgtatcctgcactgatacctgttcgatatttcccgatacgtatcaggagagta 32130681  T
Q  138 tccaaagattaaattttattttt 160  Q
    |||||| ||||||||||||||||    
T  32130680 tccaaatattaaattttattttt 32130658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 25834616 - 25834495
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    |||||| || |||||||||||| |||| ||||||||||||| | |||| |||||||||||||||||| |    ||||  ||||| ||||||| | |||||    
T  25834616 tgtgaaaccccgatacttcaaattggatgacgtatcgtatcccgtgcgtatcctgcactgatacatgcctgatatttctcgatacgtatcaggacagtat 25834517  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  25834516 ccaaatattaaattttattttt 25834495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 320 - 398
Target Start/End: Complemental strand, 10894336 - 10894258
Alignment:
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||||||||||||||||||| |||| |||| |||||| |||||||| |||||||||  |||||||| |||||||||    
T  10894336 taacaatgttccttttggatatagtatagcactgatggtgttctttttgtgatatattgtgtatgtaattgactaatca 10894258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 306 - 400
Target Start/End: Original strand, 32018383 - 32018477
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatcacc 400  Q
    ||||||||||  | ||||||||||| ||||||||||| |||| |||  |||||||||||||||| ||||||||  |||||||| |||||||||||    
T  32018383 atatagtataacactaacaatgttctttttggatatagtatagcaccgatggtgctctttttggtatatattgtgtatgtaattgactaatcacc 32018477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 53 - 160
Target Start/End: Original strand, 8356967 - 8357077
Alignment:
Q  53 gatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtatccaaagattaa 149  Q
    |||||||||||||||| |||||| |||||| | |||| ||||||||| ||||| ||||    | || |||||| ||||| |||||||||||||| |||||    
T  8356967 gatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgtccgatacttcccgatacgtatccgaagagtatccaaatattaa 8357066  T
Q  150 attttattttt 160  Q
    |||||||||||    
T  8357067 attttattttt 8357077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 293 - 398
Target Start/End: Original strand, 26327567 - 26327674
Alignment:
Q  293 ttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcg 390  Q
    |||||||||||||  ||||||||||  | ||||||||| | |||| |||||| |||||||||||| |||||||||||| |||||||||  |||||||  |    
T  26327567 ttcttttttggatcaatatagtataacactaacaatgtacattttagatatagtataacactaattgtgctctttttgagatatattgtctatgtaactg 26327666  T
Q  391 actaatca 398  Q
    ||||||||    
T  26327667 actaatca 26327674  T

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Target: chr6; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 1036946 - 1036825
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| |||||| |||||| | |||| ||||||||| ||||| || |    | ||||||||| ||||| | |||||||    
T  1036946 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtat 1036847  T
Q  139 ccaaagattaaattttattttt 160  Q
    | ||| ||||||||||||||||    
T  1036846 ctaaatattaaattttattttt 1036825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 257 - 308
Target Start/End: Original strand, 3212785 - 3212836
Alignment:
Q  257 ttaattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  3212785 ttaactaaaataacttaactcttgagtactgatgtgttctttttttgatata 3212836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 180 - 308
Target Start/End: Complemental strand, 13061355 - 13061225
Alignment:
Q  180 gatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataacttaactc 277  Q
    ||||||| ||||||| ||| ||||||||||||||| | |||  |||| | ||| ||||| |  |||||| ||||||||  ||| ||||||||||||| |     
T  13061355 gatactttctgatacgtattaggagagtatctgataactatcttgcagcaatacctgccccagtatttcccaattaatattaactaaaataacttaattt 13061256  T
Q  278 ttgagtactgatgtgttcttttttggatata 308  Q
    ||||||| ||||||||| |||||||||||||    
T  13061255 ttgagtattgatgtgttattttttggatata 13061225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 306 - 400
Target Start/End: Original strand, 3212856 - 3212950
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatcacc 400  Q
    ||||||||||  | ||||||||||| ||||| ||||| |||| |||| ||| |||||||||||| ||||||||  |||||||| |||||||||||    
T  3212856 atatagtataacactaacaatgttctttttgaatatagtatatcactgatgatgctctttttggtatatattgtgtatgtaattgactaatcacc 3212950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 160
Target Start/End: Complemental strand, 31195987 - 31195868
Alignment:
Q  44 tgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtatcc 140  Q
    |||||| || ||||||||||||||| ||||||||||||| | |||| ||||||||| ||||| || |    | || |||||| ||||| | |||||||||    
T  31195987 tgaagcttccatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatctggagagtatcc 31195888  T
Q  141 aaagattaaattttattttt 160  Q
    ||| ||||||||||||||||    
T  31195887 aaatattaaattttattttt 31195868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 3212475 - 3212596
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| ||||||||||||  |||| | ||||||||| ||||  || |    | || |||||| ||||| | |||||||    
T  3212475 tgtgaagccccgatacttcaaaatggatgacgtatcgtattccttgtgtatcctgcaccgatatctgcccgatacttcccgatacgtatccggagagtat 3212574  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  3212575 ccaaatattaaattttattttt 3212596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 306 - 398
Target Start/End: Complemental strand, 6707871 - 6707779
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||||||  | ||||||||||| ||||||||||| |||| || | ||||||||| ||||||||| |||||  |||||||| || ||||||    
T  6707871 atatagtataacactaacaatgttcattttggatatagtatagcattgatggtgctccttttgggatgtattgtgtatgtaattgattaatca 6707779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 293 - 350
Target Start/End: Complemental strand, 31740548 - 31740489
Alignment:
Q  293 ttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataaca 350  Q
    |||||||||||||  ||||||||||  | |||||||||||||||||||||||||||||||    
T  31740548 ttcttttttggatcgatatagtatagcactaacaatgttccttttggatataatataaca 31740489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 257 - 308
Target Start/End: Original strand, 32018313 - 32018363
Alignment:
Q  257 ttaattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    |||| ||||||||||||||||||||||||| |||||||||||||| ||||||    
T  32018313 ttaactaaaataacttaactcttgagtact-atgtgttcttttttcgatata 32018363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 324 - 378
Target Start/End: Original strand, 7255227 - 7255281
Alignment:
Q  324 aatgttccttttggatataatataacactaatggtgctctttttgggatatattg 378  Q
    ||||||||||||||||||| |||| |||| || ||||||||| ||||||||||||    
T  7255227 aatgttccttttggatatagtatagcactgattgtgctctttgtgggatatattg 7255281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 32130328 - 32130271
Alignment:
Q  343 atataacactaatggtgctctttttgggatatattggatatgtaatcgactaatcacc 400  Q
    |||||||||| |||||||||||||||| |||| |||  |||||||| |||||||||||    
T  32130328 atataacactgatggtgctctttttggtatattttgcgtatgtaattgactaatcacc 32130271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 398
Target Start/End: Complemental strand, 13045227 - 13045121
Alignment:
Q  293 ttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcg 390  Q
    |||||||||||||  ||||||||||  | |||| || ||||||||||||||| |||  |||| |||||||| ||||| ||||||||||  |||||||| |    
T  13045227 ttcttttttggattgatatagtataacactaacgatcttccttttggatatagtattgcactgatggtgct-tttttaggatatattgtgtatgtaattg 13045129  T
Q  391 actaatca 398  Q
     |||||||    
T  13045128 gctaatca 13045121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 158
Target Start/End: Complemental strand, 10894623 - 10894584
Alignment:
Q  119 gatatgtatcagaagagtatccaaagattaaattttattt 158  Q
    |||| ||||||| |||||||||||||||||||||||||||    
T  10894623 gatacgtatcaggagagtatccaaagattaaattttattt 10894584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 104
Target Start/End: Original strand, 32017986 - 32018037
Alignment:
Q  53 gatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgata 104  Q
    |||||||||||||||| ||||||||||||| | |||| ||||||||| ||||    
T  32017986 gatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgata 32018037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 322 - 398
Target Start/End: Complemental strand, 13607593 - 13607520
Alignment:
Q  322 acaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||| || |||||| |||||||||||||   ||| || ||||||||||||||||||  |||||||| |||||||||    
T  13607593 acaatttttcttttgaatataatataaca---atgatgttctttttgggatatattgtgtatgtaattgactaatca 13607520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 308
Target Start/End: Original strand, 8357624 - 8357660
Alignment:
Q  271 ttaactcttgagtactgatgtgttcttttttggatata 308  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  8357624 ttaactctt-agtactgatgtgttcttttttggatata 8357660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 293 - 398
Target Start/End: Complemental strand, 13061220 - 13061114
Alignment:
Q  293 ttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcg 390  Q
    |||||||||||||  ||||||||||  | |||  || ||||| |||| |||| ||||||||| ||| || | ||||||||||||||||  |||||||| |    
T  13061220 ttcttttttggatcgatatagtatagcactaatgatcttcctcttgggtatagtataacactgatgctgtt-tttttgggatatattgtgtatgtaattg 13061122  T
Q  391 actaatca 398  Q
    ||||||||    
T  13061121 actaatca 13061114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 91; Significance: 6e-44; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 42 - 397
Target Start/End: Original strand, 9781640 - 9782000
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtat 138  Q
    |||||||||  |||||||||||||||  ||||||||||||| | |||| ||||||||| ||||| || |    | ||||||||| |||||||||||||||    
T  9781640 tgtgaagccctgatacttcaaaatggttgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatcagaagagtat 9781739  T
Q  139 ccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcc 238  Q
    || |||||||| |||| |||||        |||  ||||||||||||||| ||||| |||||||| |||||| ||| ||||| ||||||| ||| |||||    
T  9781740 ccgaagattaatttttttttttttttaaaataa--ttatccgatacttcccgatacgtatcaggaaagtatccgataattatcctgcacctatacctgcc 9781837  T
Q  239 tcgatatttctcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttt 334  Q
     | ||| ||| |||||||  |||| |||||||||||||||||||||||| | ||  |||||||||||||  ||| ||||||  | |||||||||| ||||    
T  9781838 ccaataattcccaattaacgttaaataaaataacttaactcttgagtacag-tg-cttcttttttggatcgatacagtatagcactaacaatgtttcttt 9781935  T
Q  335 tggatataatataacactaatggtgc--tctttttgggatatattggatatgtaatcgactaatc 397  Q
    |||||||| |||| |||| |||||||  | ||||||||||||||||  || ||||| ||||||||    
T  9781936 tggatatagtatagcacttatggtgctttttttttgggatatattgtgtacgtaattgactaatc 9782000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 120 - 308
Target Start/End: Complemental strand, 41676028 - 41675841
Alignment:
Q  120 atatgtatcagaagagtatccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgatta 219  Q
    ||||||||  ||||||||||| |||||||||||||||||||        |||  |||||| |||||||| ||||| ||||||||||||||| ||| ||||    
T  41676028 atatgtattggaagagtatccgaagattaaattttatttttttaaaaaataa--ttatccaatacttcccgatacttatcaggagagtatccgatcatta 41675931  T
Q  220 ttctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    | || ||||| |||||||| ||||| | | ||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  41675930 tcctacaccggtatctgccccgatactcc-caattaatgttaattaaaataacttaactcttgagtactgatgtgttcttttttgaatata 41675841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 46 - 398
Target Start/End: Original strand, 29167949 - 29168304
Alignment:
Q  46 aagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatg--tca-attttccgatatgtatcagaagagtatccaa 142  Q
    ||||||| ||||||||||||||| |||||||| |||| | |||| ||||||||| ||||| ||  | | | || ||| || ||||||| ||||||||| |    
T  29167949 aagcctccatacttcaaaatggatgacgtatcatatcccctgcgtatcctgcaccgatacctgcatgatacttcccgttacgtatcaggagagtatccga 29168048  T
Q  143 agattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcga 242  Q
    ||||||||||| ||||||        |||  ||||| ||||||||| ||||| ||| ||||||||| |  || ||||| |||||| |||| || || | |    
T  29168049 agattaaatttaatttttttaaaaaataa--ttatctgatacttcccgatacgtatgaggagagtacccaataattatcctgcactgatacctaccccaa 29168146  T
Q  243 tatttctcaattaat--taattaaaataacttaactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttttgga 338  Q
    || ||| ||||||||  ||| ||||||||||||||| ||||||| | |||  |||||||||||||  ||||||||||  | |||||||||| ||||||||    
T  29168147 tacttcccaattaatattaactaaaataacttaactattgagta-taatgc-ttcttttttggatcaatatagtatagtactaacaatgtttcttttgga 29168244  T
Q  339 tataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    |||| |||| |||| ||| |||||||||| ||||||||||  |||||||| |||||||||    
T  29168245 tatagtatatcacttatgatgctcttttttggatatattgtgtatgtaattgactaatca 29168304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 119 - 301
Target Start/End: Original strand, 38218461 - 38218643
Alignment:
Q  119 gatatgtatcagaagagtatccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgatt 218  Q
    |||| ||||||||||||||||| |||||||||||||||||||        |||  |||| |||||||||| ||||||||| ||||||||||| ||| |||    
T  38218461 gatacgtatcagaagagtatccgaagattaaattttatttttttaaaaaataa--ttattcgatacttcccgatacatattaggagagtatccgatcatt 38218558  T
Q  219 attctgcaccgatatctgcctcgatatttctcaatta--attaattaaaataacttaactcttgagtactgatgtgttctttttt 301  Q
    || || ||||  |||||||| ||||| ||| ||||||  ||||  ||||||||||||||||||||||| ||||||||||||||||    
T  38218559 atcctacaccagtatctgccccgatacttcccaattaatattagctaaaataacttaactcttgagtattgatgtgttctttttt 38218643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 172 - 398
Target Start/End: Complemental strand, 9528832 - 9528605
Alignment:
Q  172 aattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataa 269  Q
    ||||||| ||||||||| ||||| ||| ||||||||||| ||| |||||||||||| |||| ||||| | ||| |||| ||||||  |||| ||||||||    
T  9528832 aattatctgatacttcccgatacgtattaggagagtatccgataattattctgcacagatacctgccccaatacttcttaattaatgttaactaaaataa 9528733  T
Q  270 cttaactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctcttttt 367  Q
    ||||||| ||||||| |  ||  |||||||||||||  ||||||||||  | |||| ||||| |||||||||||| |||| |||| ||| ||  ||||||    
T  9528732 cttaact-ttgagta-tagtg-cttcttttttggatcgatatagtatagcactaacgatgtttcttttggatatagtatagcacttatgatgtccttttt 9528636  T
Q  368 gggatatattggatatgtaatcgactaatca 398  Q
    |||||||||||  |||||||| |||||||||    
T  9528635 gggatatattgtgtatgtaattgactaatca 9528605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 257 - 398
Target Start/End: Original strand, 10822610 - 10822751
Alignment:
Q  257 ttaattaaaataacttaactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataacactaa 354  Q
    |||||||||||||||||||||||||||| | |||  |||||||||||||  ||||| ||||| | |||||||||| |||||||||||| |||| |||| |    
T  10822610 ttaattaaaataacttaactcttgagta-taatgc-ttcttttttggatcgatataatatatcactaacaatgtttcttttggatatagtatagcactta 10822707  T
Q  355 tggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
     |||||||||||||||||||||||  |||||||| |||||||||    
T  10822708 cggtgctctttttgggatatattgtgtatgtaattgactaatca 10822751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 132 - 398
Target Start/End: Original strand, 24851565 - 24851849
Alignment:
Q  132 agagtatccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgat 231  Q
    |||||||||||||||||||||||||||||        |||  ||||||||||||||| |||||  |||||||||||||| ||| |||||    |||| ||    
T  24851565 agagtatccaaagattaaattttatttttttaaaaaataa--ttatccgatacttcccgatacgcatcaggagagtatccgataattat----cacccat 24851658  T
Q  232 atctgcctcgatatttctcaattaat--taattaaaataacttaactcttgagtactgatgtgttcttttttggat----------------------at 307  Q
    | ||||| ||||||||  ||||||||  ||| ||||||||||||||||||||||| |||||||||||||||| |||                      ||    
T  24851659 acctgccccgatattttccaattaatgttaactaaaataacttaactcttgagtaatgatgtgttctttttttgatatagtgattcttttttggatcgat 24851758  T
Q  308 atagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||||  | ||||||||||| ||||||||||| |||| ||| ||||||||||||||||||||||||||  |||||||| |||||||||    
T  24851759 atagtatagcactaacaatgttcgttttggatatagtatagcacaaatggtgctctttttgggatatattgtgtatgtaattgactaatca 24851849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 52 - 308
Target Start/End: Complemental strand, 24590225 - 24589974
Alignment:
Q  52 cgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtcaattttccgatatgtatcagaagagtatccaaagattaaat 151  Q
    ||||||||||||| ||| | |||| |||||  |||||| ||||||||||||||| || |      |||||| ||||||  |||||||   ||||||||||    
T  24590225 cgatacttcaaaagggatggcgtaccgtattccttgcgtatcctgcactgatacctgcc------ccgatacgtatcaagagagtatttgaagattaaat 24590132  T
Q  152 tttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctca 251  Q
    |||||||||        |||  ||||| ||||||||| ||||||||||| ||||||||| ||| ||||| || ||||||||  || | ||||| ||| ||    
T  24590131 tttatttttttaaaaaataa--ttatctgatacttcccgatacatatcaagagagtatccgatcattatcctacaccgatacatgtcccgatacttccca 24590034  T
Q  252 attaa--ttaattaaaataacttaactcttgagtactgatgtg-ttcttttttggatata 308  Q
    |||||  |||| ||||||||||||||||||||||||||||||| |||||||||| |||||    
T  24590033 attaatgttaactaaaataacttaactcttgagtactgatgtgcttcttttttgaatata 24589974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 306 - 398
Target Start/End: Complemental strand, 32380911 - 32380819
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||||||  | ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||   ||||||||||||||||||    
T  32380911 atatagtataacactaacaatgttccttttgaatatagtataacactaatggtgctctttttgggatatattatgtatgtaatcgactaatca 32380819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 180 - 308
Target Start/End: Complemental strand, 2472904 - 2472774
Alignment:
Q  180 gatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataacttaactc 277  Q
    ||||||| | ||||| ||||||||||||||| ||| ||||| | |||| || | ||||| ||||||||| ||||||||  ||| ||||||||||||||||    
T  2472904 gatactttccgatacgtatcaggagagtatccgataattatccagcactgacacctgccccgatatttcccaattaatgttaactaaaataacttaactc 2472805  T
Q  278 ttgagtactgatgtgttcttttttggatata 308  Q
    ||||||||  ||||||| |||||||||||||    
T  2472804 ttgagtacgaatgtgttattttttggatata 2472774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 196 - 308
Target Start/End: Original strand, 36551537 - 36551651
Alignment:
Q  196 tatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataacttaactcttgagtactgatgtgt 293  Q
    ||||||||||||||| ||| ||||| ||  | ||||||||||| ||||| ||| ||||||||  ||| ||||||||||||||||||||||| ||||||||    
T  36551537 tatcaggagagtatccgatcattatcctatatcgatatctgccccgatacttcccaattaatgttaactaaaataacttaactcttgagtagtgatgtgt 36551636  T
Q  294 tcttttttggatata 308  Q
    ||||||||| |||||    
T  36551637 tcttttttgaatata 36551651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 172 - 397
Target Start/End: Original strand, 29861926 - 29862156
Alignment:
Q  172 aattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataa 269  Q
    ||||||||||||||||  ||||| |||||||| |||||| ||| ||||| ||||||| ||| ||| | | ||| ||| |||||||  |||| ||||||||    
T  29861926 aattatccgatacttctcgatacgtatcaggaaagtatccgataattatcctgcacctatacctgtcccaataattcccaattaacgttaaataaaataa 29862025  T
Q  270 cttaactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataacactaatggtg---ctctt 364  Q
    ||||||||||||||| |  ||  |||||||||||||  ||| ||||||  | |||||||||| |||||||||||| |||| |||| || |||    | ||    
T  29862026 cttaactcttgagta-tagtg-cttcttttttggattgataaagtataccactaacaatgtttcttttggatatagtatatcacttatagtgtttttttt 29862123  T
Q  365 tttgggatatattggatatgtaatcgactaatc 397  Q
    ||||||||||||||  |||||||| ||||||||    
T  29862124 tttgggatatattgtgtatgtaattgactaatc 29862156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 293 - 398
Target Start/End: Original strand, 47654936 - 47655043
Alignment:
Q  293 ttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcg 390  Q
    |||||||||||||  ||||||||||  | ||||||||||| |||||||||||||||| |||| ||| |||||||||||| ||||||||  |||||||| |    
T  47654936 ttcttttttggatcgatatagtataacactaacaatgttcattttggatataatatagcactgatgatgctctttttggtatatattgtgtatgtaattg 47655035  T
Q  391 actaatca 398  Q
    ||||||||    
T  47655036 actaatca 47655043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 41 - 159
Target Start/End: Original strand, 14167081 - 14167202
Alignment:
Q  41 ttgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagta 137  Q
    |||||||| ||||||||||||||||||| ||| ||||||||||| |||| ||||||||| ||||  ||||    | || | |||| ||||||||||||||    
T  14167081 ttgtgaagtctcgatacttcaaaatggatgacttatcgtatcacctgcgtatcctgcaccgatatctgtctgatacttcctgatacgtatcagaagagta 14167180  T
Q  138 tccaaagattaaattttatttt 159  Q
    ||| ||||||||||||||||||    
T  14167181 tccgaagattaaattttatttt 14167202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 172 - 308
Target Start/End: Original strand, 47654793 - 47654931
Alignment:
Q  172 aattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataa 269  Q
    ||||||||||||| |||| |||| |||||| | |||||  ||| ||||| || |||||||| ||||| ||||||||  ||||||||  | | ||||| ||    
T  47654793 aattatccgatacatcctcatacttatcagaatagtattcgataattatcctacaccgatacctgccccgatattttccaattaatgttgactaaaaaaa 47654892  T
Q  270 cttaactcttgagtactgatgtgttcttttttggatata 308  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  47654893 cttaactcttgagtactgatgtgttcttttacggatata 47654931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 119 - 395
Target Start/End: Original strand, 10763737 - 10764009
Alignment:
Q  119 gatatgtatcagaagagtatccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgatt 218  Q
    |||| ||||||||||||||||| |||||||| |||| |||||         | ||||||||||||||||| | ||| |||||| | |||||||||| |||    
T  10763737 gatacgtatcagaagagtatccgaagattaatttttttttttaa-------ataattatccgatacttccgg-tacgtatcagaaaagtatctgataatt 10763828  T
Q  219 attctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttcttttttggat--atatagtat 314  Q
    || ||||||| ||| ||||| | ||| ||| |||||||  |||| |||||||||||||||| |||||| || ||  ||||||||| |||  |||||||||    
T  10763829 atcctgcacctatacctgccccaataattcccaattaacgttaaataaaataacttaactcctgagta-tggtg-cttcttttttagatcgatatagtat 10763926  T
Q  315 atgaataacaatgttccttttggatataatataacactaatggtgc--tctttttgggatatattggatatgtaatcgactaa 395  Q
    |  | ||| |||||| ||||||||||||  ||| |||| |||||||  | ||||||| ||||||||  |||||||| ||||||    
T  10763927 agcactaaaaatgtttcttttggatatagaatatcacttatggtgctttttttttggaatatattgtgtatgtaattgactaa 10764009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 320 - 397
Target Start/End: Original strand, 15417695 - 15417772
Alignment:
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatc 397  Q
    |||||||||||||||| |||||| ||||||| | ||||| ||||||||||||||||||| ||||||||| ||||||||    
T  15417695 taacaatgttcctttttgatatagtataacattgatggtcctctttttgggatatattgtatatgtaattgactaatc 15417772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 172 - 284
Target Start/End: Complemental strand, 34096542 - 34096428
Alignment:
Q  172 aattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataa 269  Q
    ||||||||||||||||| ||||| |||||||| ||||||  || ||||| ||||||| ||| ||||| | ||| |||||||||||  |||| ||||||||    
T  34096542 aattatccgatacttcccgatacgtatcaggaaagtatccaataattatcctgcacctatacctgccccaataattctcaattaacgttaaataaaataa 34096443  T
Q  270 cttaactcttgagta 284  Q
    ||||||||| |||||    
T  34096442 cttaactctcgagta 34096428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 242 - 304
Target Start/End: Original strand, 33039809 - 33039873
Alignment:
Q  242 atatttctcaattaat--taattaaaataacttaactcttgagtactgatgtgttcttttttgga 304  Q
    ||||||| ||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||    
T  33039809 atatttcccaattaatgttaactaaaataacttaactcttgagtactgatgtgttcttttttgga 33039873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 320 - 388
Target Start/End: Original strand, 36551685 - 36551752
Alignment:
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaat 388  Q
    ||||||||||||||||||||||||||||||||| ||  |||||||||||||||||||||  ||||||||    
T  36551685 taacaatgttccttttggatataatataacactgat-atgctctttttgggatatattgtgtatgtaat 36551752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 6916994 - 6916873
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| |||||| |||||| | |||| ||||||||| ||||| || |    | ||||||||| ||||| | |||||||    
T  6916994 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtat 6916895  T
Q  139 ccaaagattaaattttattttt 160  Q
    | ||| ||||||||||||||||    
T  6916894 ctaaatattaaattttattttt 6916873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 37 - 160
Target Start/End: Original strand, 8132176 - 8132302
Alignment:
Q  37 tcatttgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatg-tcaat--tttccgatatgtatcagaag 133  Q
    |||| ||||||||  |||||||||||||| || |||||| |||||| | |||| ||||||||| |||||||| || ||  || |||||| ||||| | ||    
T  8132176 tcatctgtgaagctccgatacttcaaaatagatgacgtaccgtatcccctgcgtatcctgcaccgatacatgttcgatacttcccgatacgtatccggag 8132275  T
Q  134 agtatccaaagattaaattttattttt 160  Q
    |||||||||| ||||||||||||||||    
T  8132276 agtatccaaatattaaattttattttt 8132302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 306 - 397
Target Start/End: Original strand, 14167334 - 14167425
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatc 397  Q
    ||||||||||  | |||||||||  |||||||||||| |||| | || |||||||||||||||||||||||||  |||||||| ||||||||    
T  14167334 atatagtataacactaacaatgtatcttttggatatagtatagctcttatggtgctctttttgggatatattgtgtatgtaattgactaatc 14167425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 38330425 - 38330546
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| |||||| |||||| | |||| ||||||||| ||||| || |    | ||||||||| ||||| | |||||||    
T  38330425 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtat 38330524  T
Q  139 ccaaagattaaattttattttt 160  Q
    | ||| ||||||||||||||||    
T  38330525 ctaaatattaaattttattttt 38330546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 52895833 - 52895712
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| |||||| |||||| | |||| ||||||||| ||||| || |    | ||||||||| ||||| | |||||||    
T  52895833 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtat 52895734  T
Q  139 ccaaagattaaattttattttt 160  Q
    | ||| ||||||||||||||||    
T  52895733 ctaaatattaaattttattttt 52895712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 324 - 398
Target Start/End: Original strand, 32797474 - 32797548
Alignment:
Q  324 aatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||| ||||||||||| |||| || | ||||||||||||||||||||||||  ||||||||| |||||||||    
T  32797474 aatgttcattttggatatagtatatcattgatggtgctctttttgggatatattatatatgtaattgactaatca 32797548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 293 - 400
Target Start/End: Complemental strand, 34432283 - 34432174
Alignment:
Q  293 ttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcg 390  Q
    |||||||||||||  ||||||||||  | |||||||||| |||| ||||||| ||||  ||| |||||| |||||||| |||||||||  |||||||| |    
T  34432283 ttcttttttggatcgatatagtataacactaacaatgtttctttgggatatagtatagtacttatggtgttctttttgagatatattgtgtatgtaattg 34432184  T
Q  391 actaatcacc 400  Q
    ||||||||||    
T  34432183 actaatcacc 34432174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 306 - 388
Target Start/End: Original strand, 37922479 - 37922561
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaat 388  Q
    ||||||||||  | |||||||||| |||||||||||| |||| || | |||||||||||||||||||||||||  ||||||||    
T  37922479 atatagtatagcactaacaatgtttcttttggatatagtatagcattgatggtgctctttttgggatatattgtgtatgtaat 37922561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 160
Target Start/End: Complemental strand, 20409672 - 20409553
Alignment:
Q  44 tgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtatcc 140  Q
    ||||||| ||||||||||||||||| |||||| |||||| | |||| ||||||||| ||||| || |    | || |||||| ||||| | |||||||||    
T  20409672 tgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtatcc 20409573  T
Q  141 aaagattaaattttattttt 160  Q
    ||| ||||||||||||||||    
T  20409572 aaatattaaattttattttt 20409553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 160
Target Start/End: Original strand, 37104120 - 37104239
Alignment:
Q  44 tgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtatcc 140  Q
    ||||||| ||||||||||||||||| ||||||||||||| | |||| ||||||||| ||||| || |    | || | |||| ||||| | |||||||||    
T  37104120 tgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatccggagagtatcc 37104219  T
Q  141 aaagattaaattttattttt 160  Q
    ||| ||||||||||||||||    
T  37104220 aaatattaaattttattttt 37104239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 308
Target Start/End: Complemental strand, 3708400 - 3708137
Alignment:
Q  41 ttgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagta 137  Q
    ||||||| || ||||||||||||||||| |||||||||||||   |||  ||||| |||  ||||||| |    | ||| ||||| ||||||| ||||||    
T  3708400 ttgtgaaaccccgatacttcaaaatggatgacgtatcgtatcctctgcatatcctacaccaatacatgcccgatacttttcgatacgtatcaggagagta 3708301  T
Q  138 tccaaagattaaa-ttttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctg 236  Q
    | | || |||||| ||||||||||        || |||||| |||||||||  ||||| |||||||||||||||  || |||||  |||||| |||  ||    
T  3708300 ttcgaatattaaatttttattttt---taaaatataattattcgatacttctcgatacgtatcaggagagtatccaataattatcttgcaccaatacttg 3708204  T
Q  237 cctcgatatttctcaattaattaattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    || | ||||||     || ||| | |||||||||||||||||||||||| ||||||||||||||| ||||||    
T  3708203 ccccaatattt-----ttcattgactaaaataacttaactcttgagtaccgatgtgttcttttttagatata 3708137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 54 - 160
Target Start/End: Original strand, 1036469 - 1036578
Alignment:
Q  54 atacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtatccaaagattaaa 150  Q
    ||||||||||||||| |||||| |||||| | |||| ||||||||| ||||| || |    | ||||||||| ||||| | |||||||||||| ||||||    
T  1036469 atacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtatccaaatattaaa 1036568  T
Q  151 ttttattttt 160  Q
    ||||||||||    
T  1036569 ttttattttt 1036578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 1043225 - 1043346
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| || ||| |||||| | |||| ||||||||| ||||| || |    | || |||||| ||||| | |||||||    
T  1043225 tgtgaagccccgatacttcaaaatggatgatgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtat 1043324  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  1043325 ccaaatattaaattttattttt 1043346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 160
Target Start/End: Original strand, 2364686 - 2364796
Alignment:
Q  53 gatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc-aat--tttccgatatgtatcagaagagtatccaaagattaa 149  Q
    ||||||||||||||||  ||||| | |||| | |||| ||||||||  ||||| || | |||  ||||||||| ||||||||||||||||| ||||||||    
T  2364686 gatacttcaaaatggataacgtaccatatcccctgcgtatcctgcatcgatacctgcccaatactttccgatacgtatcagaagagtatccgaagattaa 2364785  T
Q  150 attttattttt 160  Q
    |||||||||||    
T  2364786 attttattttt 2364796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 28949361 - 28949240
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| |||||| |||||| | |||| ||||||||| ||||| || |    | || | |||| ||||| | |||||||    
T  28949361 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatccggagagtat 28949262  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  28949261 ccaaatattaaattttattttt 28949240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 37346968 - 37346847
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| |||||| |||||| | |||| ||||||||| ||||| || |    | || |||||| ||||| |  ||||||    
T  37346968 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatcgggggagtat 37346869  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  37346868 ccaaatattaaattttattttt 37346847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 343 - 400
Target Start/End: Complemental strand, 31653085 - 31653028
Alignment:
Q  343 atataacactaatggtgctctttttgggatatattggatatgtaatcgactaatcacc 400  Q
    |||||||||| |||||||||||||||| |||| |||  |||||||| |||||||||||    
T  31653085 atataacacttatggtgctctttttggtatattttgcgtatgtaattgactaatcacc 31653028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 220
Target Start/End: Complemental strand, 48715214 - 48715166
Alignment:
Q  172 aattatccgatacttcctgatacatatcaggagagtatctgatgattat 220  Q
    ||||||| ||||||||| ||||||||||| ||||||||||||| |||||    
T  48715214 aattatcagatacttcccgatacatatcaagagagtatctgataattat 48715166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 99
Target Start/End: Original strand, 10822402 - 10822457
Alignment:
Q  44 tgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcac 99  Q
    ||||||||||||||||||||||||| |||||||| |||  | |||| |||||||||    
T  10822402 tgaagcctcgatacttcaaaatggatgacgtatcatattccctgcgtatcctgcac 10822457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 34432503 - 34432382
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtat 138  Q
    ||||||||  ||||||||||||||||| ||||||| ||||| | |||| ||| ||||||| ||  || |    | || | |||| ||||||| |||||||    
T  34432503 tgtgaagctccgatacttcaaaatggatgacgtattgtatcccctgcgtatcatgcactggtatctgcctgatacttcctgatacgtatcaggagagtat 34432404  T
Q  139 ccaaagattaaattttattttt 160  Q
    || |||||||||||||||||||    
T  34432403 ccgaagattaaattttattttt 34432382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 158
Target Start/End: Complemental strand, 2223026 - 2222980
Alignment:
Q  112 attttccgatatgtatcagaagagtatccaaagattaaattttattt 158  Q
    ||||||||||| ||||||| ||||||||  |||||||||||||||||    
T  2223026 attttccgatacgtatcaggagagtatctgaagattaaattttattt 2222980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 336 - 398
Target Start/End: Complemental strand, 3708099 - 3708037
Alignment:
Q  336 ggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||| |||| ||||  |||| |||||||||||||||||||  |||||||| |||||||||    
T  3708099 ggatatagtatagcactggtggtcctctttttgggatatattgtgtatgtaattgactaatca 3708037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 114 - 160
Target Start/End: Complemental strand, 28659345 - 28659299
Alignment:
Q  114 tttccgatatgtatcagaagagtatccaaagattaaattttattttt 160  Q
    ||||||||| ||||| | |||||||||||| ||||||||||||||||    
T  28659345 tttccgatacgtatccggagagtatccaaatattaaattttattttt 28659299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 308
Target Start/End: Original strand, 5984919 - 5984955
Alignment:
Q  271 ttaactcttgagtactgatgtgttcttttttggatata 308  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  5984919 ttaactctt-agtactgatgtgttcttttttggatata 5984955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 400
Target Start/End: Complemental strand, 13012722 - 13012609
Alignment:
Q  293 ttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataacact----aatggtgctctttttgggatatattggatatgta 386  Q
    |||||||||||||  ||||| ||||  | || ||||||||||||| |||||| ||||||| |     |||||||||||||||| |||| |||  ||||||    
T  13012722 ttcttttttggatcgatataatatagcactagcaatgttccttttagatatagtataacattgatgtatggtgctctttttggtatattttgcgtatgta 13012623  T
Q  387 atcgactaatcacc 400  Q
    || |||||||||||    
T  13012622 attgactaatcacc 13012609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 308
Target Start/End: Original strand, 25257349 - 25257385
Alignment:
Q  271 ttaactcttgagtactgatgtgttcttttttggatata 308  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  25257349 ttaactctt-agtactgatgtgttcttttttggatata 25257385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 308
Target Start/End: Original strand, 30324452 - 30324488
Alignment:
Q  271 ttaactcttgagtactgatgtgttcttttttggatata 308  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  30324452 ttaactctt-agtactgatgtgttcttttttggatata 30324488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 347
Target Start/End: Original strand, 43190029 - 43190085
Alignment:
Q  293 ttcttttttggat--atatagtatatgaataacaatgttccttttggatataatata 347  Q
    |||||||||||||  ||||||||||  | ||||||||||||||||||||||| ||||    
T  43190029 ttcttttttggatcgatatagtatagcactaacaatgttccttttggatatagtata 43190085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 388
Target Start/End: Original strand, 8133021 - 8133065
Alignment:
Q  344 tataacactaatggtgctctttttgggatatattggatatgtaat 388  Q
    ||||||| | |||||||||||||||| |||||||| |||||||||    
T  8133021 tataacagtgatggtgctctttttggtatatattgcatatgtaat 8133065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 124 - 160
Target Start/End: Complemental strand, 32381094 - 32381058
Alignment:
Q  124 gtatcagaagagtatccaaagattaaattttattttt 160  Q
    ||||||| ||||||||| |||||||||||||||||||    
T  32381094 gtatcaggagagtatccgaagattaaattttattttt 32381058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 172 - 220
Target Start/End: Original strand, 33039741 - 33039789
Alignment:
Q  172 aattatccgatacttcctgatacatatcaggagagtatctgatgattat 220  Q
    ||||||||||||||||| ||||| ||| ||||||||||| ||| |||||    
T  33039741 aattatccgatacttcccgatacgtatgaggagagtatccgataattat 33039789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 320 - 352
Target Start/End: Original strand, 38218682 - 38218714
Alignment:
Q  320 taacaatgttccttttggatataatataacact 352  Q
    |||||||||| ||||||||||||||||||||||    
T  38218682 taacaatgttacttttggatataatataacact 38218714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 1e-42; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 172 - 398
Target Start/End: Original strand, 3892093 - 3892321
Alignment:
Q  172 aattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataa 269  Q
    ||||||| ||||||||  ||||| ||||||||||||||| ||| ||||| ||||||||||| ||||| | ||| ||| ||||||||  ||| ||||||||    
T  3892093 aattatctgatacttctcgatacgtatcaggagagtatccgataattatcctgcaccgatacctgccccaatacttcccaattaatgttaactaaaataa 3892192  T
Q  270 cttaactcttgagtactgatgtgttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctcttttt 367  Q
    |||||||||||||||  | ||  |||||||||||||  ||||||||||  | |||||||||| |||||||||||| ||||||||| ||||||||||||||    
T  3892193 cttaactcttgagtatag-tgc-ttcttttttggattgatatagtatagcactaacaatgtttcttttggatatagtataacacttatggtgctcttttt 3892290  T
Q  368 gggatatattggatatgtaatcgactaatca 398  Q
     ||||||||||  |||||||| |||||||||    
T  3892291 aggatatattgtgtatgtaattgactaatca 3892321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 42 - 398
Target Start/End: Original strand, 37372257 - 37372609
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtat 138  Q
    ||||||||  ||||||||||||||||| ||||||||||||| | |||| ||||||||||||||| ||||    | || |||||| ||||||| |||||||    
T  37372257 tgtgaagctccgatacttcaaaatggatgacgtatcgtatctcctgcgtatcctgcactgatacctgtctgatacttcccgatacgtatcaggagagtat 37372356  T
Q  139 ccaaagattaaattttatttttnnnnnnnntaa-aattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgc 237  Q
    || |||||||||||||||||          ||| |||||| ||||||||||  |||| ||||||||||||||| ||| |||||| |||||||||| ||||    
T  37372357 ccgaagattaaattttattt--aaaaataataataattattcgatacttcccaatacgtatcaggagagtatccgataattattttgcaccgatacctgc 37372454  T
Q  238 ctcgatatttctcaattaa--ttaattaaaataacttaactcttgagtactgatgtgttcttttttggatatatagtatatgaataacaatgttcctttt 335  Q
    | | ||| ||| |||||||  |||| ||||||||||||| ||||||||| |  ||  |||||||||||||  |||  ||    ||| ||   || |||||    
T  37372455 cccaatacttcccaattaatgttaactaaaataacttaattcttgagta-tagtg-cttcttttttggatcgatataat----atagca--ctttctttt 37372546  T
Q  336 ggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||| |||| |||| |||||||||||||||||||||||||  |||||||| |||||||||    
T  37372547 ggatatagtatagcacttatggtgctctttttgggatatattgtgtatgtaattgactaatca 37372609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 44 - 281
Target Start/End: Original strand, 32424920 - 32425161
Alignment:
Q  44 tgaagcctc-gatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtatc 139  Q
    ||||||||| |||||||||||||||| |||||| |||||| |||||| ||||||||| ||||| ||||    | ||  ||||| ||||||||||||||||    
T  32424920 tgaagcctccgatacttcaaaatggatgacgtaccgtatcccttgcgtatcctgcaccgatacctgtctgatacttcacgatacgtatcagaagagtatc 32425019  T
Q  140 caaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcct 239  Q
    | |||||||||||||||||||        |||  ||||||||||||||| ||||  ||||||||||||||| ||| ||||| || ||||| ||||||||     
T  32425020 cgaagattaaattttatttttaaaaaaaataa--ttatccgatacttcccgatatgtatcaggagagtatccgatcattatcctacaccggtatctgccc 32425117  T
Q  240 cgatatttctcaattaa--ttaattaaaataacttaactcttga 281  Q
    ||||| ||  |||||||  |||| ||||||||||||||||||||    
T  32425118 cgatactttccaattaatgttaactaaaataacttaactcttga 32425161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 172 - 398
Target Start/End: Original strand, 27968234 - 27968471
Alignment:
Q  172 aattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataa 269  Q
    ||||||| ||||||||  ||||||||||||||||||||| ||| |||||  ||||| ||||||||||  |||| ||| ||||||||  ||| ||||||||    
T  27968234 aattatctgatacttctcgatacatatcaggagagtatccgataattatcttgcactgatatctgccctgatacttcccaattaatgttaactaaaataa 27968333  T
Q  270 cttaactcttgagtact------gat---gtgttcttttttggatatatagtatatgaataacaatgttccttttggatataatataacactaatggtgc 360  Q
    |||||||  || || ||      |||   ||||| ||||||    ||||||||||  | ||||||||||||||||||||||| ||||||||| |||||||    
T  27968334 cttaactgatgtgttcttttttggatatagtgtttttttttatcgatatagtataacactaacaatgttccttttggatatagtataacactgatggtgc 27968433  T
Q  361 tctttttgggatatattggatatgtaatcgactaatca 398  Q
    |||||||| |||||||||  |||||||| |||||||||    
T  27968434 tctttttgtgatatattgtgtatgtaattgactaatca 27968471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 306 - 398
Target Start/End: Original strand, 20182654 - 20182746
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||||||  | ||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||  |||||||| |||||||||    
T  20182654 atatagtataacactaacaatgttccttttggatatagtataacattaatggtgctctttttgggatatattgtttatgtaattgactaatca 20182746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 172 - 305
Target Start/End: Original strand, 38388796 - 38388931
Alignment:
Q  172 aattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataa 269  Q
    |||||||| |||||||||||||| |||||| |||||||  ||| ||||| || |||||||| ||||| ||||||||| |||||||  || | ||||| ||    
T  38388796 aattatccaatacttcctgatacttatcagaagagtattcgataattatcctacaccgatacctgccccgatatttcccaattaatgttgactaaaaaaa 38388895  T
Q  270 cttaactcttgagtactgatgtgttcttttttggat 305  Q
    ||||||||| |||||||||||||||||||| |||||    
T  38388896 cttaactctcgagtactgatgtgttcttttatggat 38388931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 172 - 302
Target Start/End: Original strand, 7411731 - 7411863
Alignment:
Q  172 aattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataa 269  Q
    ||||||||||||||||  ||||||||||||||||||||| ||| ||||| || ||  ||||  |||| ||||| ||| |||||||  |||| ||||||||    
T  7411731 aattatccgatacttctcgatacatatcaggagagtatccgatcattatcctacattgatacatgccccgatacttcccaattaatgttaactaaaataa 7411830  T
Q  270 cttaactcttgagtactgatgtgttcttttttg 302  Q
    ||||||||||||| || ||||||||||||||||    
T  7411831 cttaactcttgagaaccgatgtgttcttttttg 7411863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 52 - 160
Target Start/End: Complemental strand, 5818421 - 5818310
Alignment:
Q  52 cgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatg--tca-attttccgatatgtatcagaagagtatccaaagatta 148  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||||| ||||| ||  | | |||| |||||||||||||| ||||||||  |||||||    
T  5818421 cgatacttcaaaatggatgacgtatcgtatcacttgcgtatcctgcaccgatacctgcatgatatttcccgatatgtatcaggagagtatctgaagatta 5818322  T
Q  149 aattttattttt 160  Q
    ||||||||||||    
T  5818321 aattttattttt 5818310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 172 - 277
Target Start/End: Original strand, 20182502 - 20182609
Alignment:
Q  172 aattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataa 269  Q
    ||||| ||||||||||| ||||| ||||| || |||||||||| |||||||| || ||||||||||||||||||||| |||| ||  |||| ||||||||    
T  20182502 aattaaccgatacttcccgatacgtatcaagaaagtatctgataattattctacatcgatatctgcctcgatatttcacaataaatgttaactaaaataa 20182601  T
Q  270 cttaactc 277  Q
    ||||||||    
T  20182602 cttaactc 20182609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 36483433 - 36483554
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| |||||| |||||| | |||| ||||||||| ||||| || |    | ||||||||| ||||| |||||||||    
T  36483433 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccgaagagtat 36483532  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  36483533 ccaaatattaaattttattttt 36483554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 172 - 398
Target Start/End: Original strand, 28025220 - 28025457
Alignment:
Q  172 aattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaat--taattaaaataa 269  Q
    ||||||| ||||||||  ||||||||||||||||||||| ||| |||||  ||||| ||||||||||  |||| ||| ||||||||  |||  |||||||    
T  28025220 aattatctgatacttctcgatacatatcaggagagtatccgataattatcttgcactgatatctgccctgatacttcacaattaatgttaacgaaaataa 28025319  T
Q  270 cttaactcttgagtact------gat---gtgttcttttttggatatatagtatatgaataacaatgttccttttggatataatataacactaatggtgc 360  Q
    |||||||  || ||  |      |||   ||||| ||||||    ||||||||||  | |||||||||| |||||||||||| ||||||||| |||| ||    
T  28025320 cttaactgatgtgttattttttggatatagtgtttttttttatcgatatagtataacactaacaatgtttcttttggatatagtataacactgatggggc 28025419  T
Q  361 tctttttgggatatattggatatgtaatcgactaatca 398  Q
    |||||||| |||||||||  |||||||| |||||||||    
T  28025420 tctttttgtgatatattgtgtatgtaattgactaatca 28025457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 293 - 398
Target Start/End: Complemental strand, 27109041 - 27108934
Alignment:
Q  293 ttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcg 390  Q
    |||||||||||||  ||||||||||  | ||||||| ||||||||||||||| |||| |||| || |||||||||||||||||||||   |||||||| |    
T  27109041 ttcttttttggatcgatatagtataacactaacaattttccttttggatatagtatagcacttattgtgctctttttgggatatattatgtatgtaattg 27108942  T
Q  391 actaatca 398  Q
    ||||||||    
T  27108941 actaatca 27108934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 306 - 398
Target Start/End: Original strand, 27886464 - 27886556
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||||||  | |||||||||| |||||||||||| ||||||||| |||| |||||||||| |||||||||  |||||||| |||||||||    
T  27886464 atatagtataacactaacaatgtttcttttggatatagtataacactgatggggctctttttgtgatatattgtgtatgtaattgactaatca 27886556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 306 - 398
Target Start/End: Original strand, 27945122 - 27945214
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||||||  | |||||||||| |||||||||||| ||||||||| |||| |||||||||| |||||||||  |||||||| |||||||||    
T  27945122 atatagtataacactaacaatgtttcttttggatatagtataacactgatggggctctttttgtgatatattgtgtatgtaattgactaatca 27945214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 22201457 - 22201336
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||| | ||||||||||||||||| ||||||||||||| | |||| ||||||||| ||||| || |    | ||||||||| ||||| | |||||||    
T  22201457 tgtgaagtcccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtat 22201358  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  22201357 ccaaatattaaattttattttt 22201336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 32759371 - 32759492
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||||||||||||||||||||| |||||| |||||| | |||| ||||||||| ||||| || |    | || |||||| ||||| | |||||||    
T  32759371 tgtgaagcctcgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatctggagagtat 32759470  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  32759471 ccaaatattaaattttattttt 32759492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 32877435 - 32877556
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| ||||||||||||| | |||| ||||||||| ||||| || |    | || |||||| ||||| | |||||||    
T  32877435 tgtgaagccccgatacttcaaaatggatgacgtatcgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatcgggagagtat 32877534  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  32877535 ccaaatattaaattttattttt 32877556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 306 - 398
Target Start/End: Complemental strand, 41098798 - 41098706
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||||||  | ||||||||| | |||| |||||| |||||||||||| |||||||||||| |||||||||  |||||||| |||||||||    
T  41098798 atatagtataacattaacaatgtacattttagatatagtataacactaattgtgctctttttgagatatattgtgtatgtaattgactaatca 41098706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 16384615 - 16384736
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| |||||| |||||| | || | ||||||||| ||||| || |    | || |||||| ||||| |||||||||    
T  16384615 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgagtatcctgcaccgatacctgcccgatacttcccgatacgtatccgaagagtat 16384714  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  16384715 ccaaatattaaattttattttt 16384736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 34901502 - 34901381
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| |||||| |||||| | |||| ||||||||| ||||| || |    | ||||||||| ||||| | |||||||    
T  34901502 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatactttccgatacgtatccggagagtat 34901403  T
Q  139 ccaaagattaaattttattttt 160  Q
    | ||| ||||||||||||||||    
T  34901402 ctaaatattaaattttattttt 34901381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 257 - 308
Target Start/End: Original strand, 40412759 - 40412810
Alignment:
Q  257 ttaattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    |||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  40412759 ttaactaaaataacttaactcttgagtactgatgtgttctttttttgatata 40412810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 43771824 - 43771703
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    |||||| || ||||||||||||||||| |||||| |||||| | |||| ||||||||| ||||||||||    | || | |||| ||||| | |||||||    
T  43771824 tgtgaaaccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacatgtccgatacttcctgatacgtatccggagagtat 43771725  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  43771724 ccaaatattaaattttattttt 43771703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 45217340 - 45217219
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtat 138  Q
    ||||||||| |||||||| |||||||| ||  ||| ||||| | |||| ||||||||| ||||| ||||    ||||||||||| ||||| | |||||||    
T  45217340 tgtgaagccccgatactttaaaatggatgatatattgtatcccctgcgtatcctgcaccgatacctgtccgatattttccgatacgtatccggagagtat 45217241  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  45217240 ccaaatattaaattttattttt 45217219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 306 - 400
Target Start/End: Complemental strand, 8170937 - 8170843
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatcacc 400  Q
    ||||||||||  | || |||||||| ||||||||||  |||| |||| |||||||||||||||| ||||||||  |||||||| |||||||||||    
T  8170937 atatagtatagcactaccaatgttctttttggatattgtatagcactgatggtgctctttttggtatatattgtgtatgtaattgactaatcacc 8170843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 306 - 400
Target Start/End: Original strand, 40412830 - 40412924
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatcacc 400  Q
    ||||||||||  | |||||||||||  |||||||||| |||| |||  |||||||||||||||| ||||||||  |||||||| |||||||||||    
T  40412830 atatagtatagcactaacaatgttctctttggatatagtatagcaccgatggtgctctttttggtatatattgtgtatgtaattgactaatcacc 40412924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 179 - 308
Target Start/End: Original strand, 29355760 - 29355885
Alignment:
Q  179 cgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcctcgatatttctcaattaa--ttaattaaaataacttaact 276  Q
    |||||||||| ||||| ||| |||| |||||||||| ||||| || |  ||||||||||||||||||||| |||| ||  |||| || ||||||||||||    
T  29355760 cgatacttcccgatacgtataaggaaagtatctgataattatcctacgtcgatatctgcctcgatatttcacaataaatgttaactacaataacttaact 29355859  T
Q  277 cttgagtactgatgtgttcttttttggatata 308  Q
    ||| |      |||||||||||||||||||||    
T  29355860 cttca------atgtgttcttttttggatata 29355885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 41 - 160
Target Start/End: Complemental strand, 2873031 - 2872909
Alignment:
Q  41 ttgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagta 137  Q
    |||||||||| ||||||||||||||||| |||||| |||||| | |||| ||||||||| ||||| || |    | || |||||| ||||| | ||||||    
T  2873031 ttgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagta 2872932  T
Q  138 tccaaagattaaattttattttt 160  Q
    |||||| || |||||||||||||    
T  2872931 tccaaatatgaaattttattttt 2872909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 6028485 - 6028606
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| |||||| |||||| | |||| ||||||||| ||||  || |    | |||||||||  |||| | |||||||    
T  6028485 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatatctgcccgatactttccgatacatatcgggagagtat 6028584  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  6028585 ccaaatattaaattttattttt 6028606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 306 - 400
Target Start/End: Original strand, 7411889 - 7411983
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatcacc 400  Q
    ||||||||||  | ||||||||||  |||| ||||||||||| || | |||||||| ||||||||||||||||  |||| ||| |||||||||||    
T  7411889 atatagtataacactaacaatgtttattttagatataatatagcattgatggtgctatttttgggatatattgtttatgcaattgactaatcacc 7411983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 42 - 276
Target Start/End: Original strand, 27886188 - 27886425
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatg--tca-attttccgatatgtatcagaagagtat 138  Q
    ||||||| | ||||||||||||||||| ||||||| ||||  | |||  ||||||||| ||||| ||  | | | || |||||| ||||||| |||||||    
T  27886188 tgtgaagtcccgatacttcaaaatggatgacgtattgtattccctgcatatcctgcaccgatacctggttgatacttcccgatacgtatcaggagagtat 27886287  T
Q  139 ccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcc 238  Q
    || ||||||||| |||||||||        ||   ||||| ||||||||   |||||||||||||||||||| ||| |||||  ||||| ||||||||||    
T  27886288 ccgaagattaaagtttatttttaaaaaaaatag--ttatctgatacttctcaatacatatcaggagagtatccgataattatcttgcactgatatctgcc 27886385  T
Q  239 tcgatatttctcaattaa--ttaattaaaataacttaact 276  Q
      |||| ||| |||||||  ||||  ||||||||||||||    
T  27886386 ctgatacttcacaattaatgttaacgaaaataacttaact 27886425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 42 - 276
Target Start/End: Original strand, 27944846 - 27945083
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatg--tca-attttccgatatgtatcagaagagtat 138  Q
    ||||||| | ||||||||||||||||| ||||||| ||||  | |||  ||||||||| ||||| ||  | | | || |||||| ||||||| |||||||    
T  27944846 tgtgaagtcccgatacttcaaaatggatgacgtattgtattccctgcatatcctgcaccgatacctggttgatacttcccgatacgtatcaggagagtat 27944945  T
Q  139 ccaaagattaaattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatatctgcc 238  Q
    || ||||||||| |||||||||        ||   ||||| ||||||||   |||||||||||||||||||| ||| |||||  ||||| ||||||||||    
T  27944946 ccgaagattaaagtttatttttaaaaaaaatag--ttatctgatacttctcaatacatatcaggagagtatccgataattatcttgcactgatatctgcc 27945043  T
Q  239 tcgatatttctcaattaa--ttaattaaaataacttaact 276  Q
      |||| ||| |||||||  ||||  ||||||||||||||    
T  27945044 ctgatacttcacaattaatgttaacgaaaataacttaact 27945083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 324 - 398
Target Start/End: Original strand, 28737803 - 28737877
Alignment:
Q  324 aatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    |||||| |||||||||||| |||| |||| || ||||| ||||||||||||||||  |||||||| |||||||||    
T  28737803 aatgtttcttttggatatagtatagcacttattgtgctttttttgggatatattgtgtatgtaattgactaatca 28737877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 343 - 400
Target Start/End: Original strand, 25022602 - 25022659
Alignment:
Q  343 atataacactaatggtgctctttttgggatatattggatatgtaatcgactaatcacc 400  Q
    |||||||||| |||||||||||||||| |||| ||| ||||||||| |||||||||||    
T  25022602 atataacactgatggtgctctttttggtatattttgcatatgtaattgactaatcacc 25022659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 160
Target Start/End: Complemental strand, 24100240 - 24100192
Alignment:
Q  112 attttccgatatgtatcagaagagtatccaaagattaaattttattttt 160  Q
    ||||||||||||||||||| ||||||||| |||||||||||||| ||||    
T  24100240 attttccgatatgtatcaggagagtatccgaagattaaattttaatttt 24100192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 160
Target Start/End: Original strand, 4245938 - 4246059
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtat 138  Q
    ||||||||| |||| ||||||||| || |||||| |||||| | |||  ||||||||| ||||| || |    | || |||||| ||||| |||||||||    
T  4245938 tgtgaagccccgatgcttcaaaatagatgacgtaccgtatcccctgcatatcctgcaccgatacctgcccgatacttcccgatacgtatccgaagagtat 4246037  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  4246038 ccaaatattaaattttattttt 4246059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 257 - 308
Target Start/End: Complemental strand, 8171008 - 8170957
Alignment:
Q  257 ttaattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    |||| |||||||||||||||||||||||||||| || |||||||| ||||||    
T  8171008 ttaactaaaataacttaactcttgagtactgatatgctcttttttcgatata 8170957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 105
Target Start/End: Original strand, 19436272 - 19436335
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatac 105  Q
    ||||||||  ||||||||||||||||| |||||| |||||| |||||| ||||||||| |||||    
T  19436272 tgtgaagctccgatacttcaaaatggatgacgtaccgtatcccttgcgtatcctgcaccgatac 19436335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 105
Target Start/End: Original strand, 19572421 - 19572484
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatac 105  Q
    ||||||||  ||||||||||||||||| |||||| |||||| |||||| ||||||||| |||||    
T  19572421 tgtgaagctccgatacttcaaaatggatgacgtaccgtatcccttgcgtatcctgcaccgatac 19572484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 257 - 308
Target Start/End: Complemental strand, 27109097 - 27109046
Alignment:
Q  257 ttaattaaaataacttaactcttgagtactgatgtgttcttttttggatata 308  Q
    |||| ||||||||||||||| || ||||| ||||||||||||||||||||||    
T  27109097 ttaactaaaataacttaactgttaagtaccgatgtgttcttttttggatata 27109046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 42 - 159
Target Start/End: Original strand, 13422206 - 13422326
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| |||||| |||||| | |||  ||||||||| ||||| || |    | || |||||| ||||  | |||||||    
T  13422206 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcatatcctgcaccgatacctgcctgatacttcccgatacgtatacggagagtat 13422305  T
Q  139 ccaaagattaaattttatttt 159  Q
    ||||| |||||||||||||||    
T  13422306 ccaaatattaaattttatttt 13422326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 296 - 397
Target Start/End: Original strand, 32855 - 32961
Alignment:
Q  296 ttttttggat--atatagtatatgaataacaatgttccttttggatataatataacactaatggtg---ctctttttgggatatattggatatgtaatcg 390  Q
    ||||||||||  ||||||||||  | |||||||||| |||||||||||| ||||||||| ||| ||    | ||||| |||||||||| ||||||||| |    
T  32855 ttttttggatcaatatagtataacactaacaatgtttcttttggatatagtataacacttatgatgttttttttttttggatatattgtatatgtaattg 32954  T
Q  391 actaatc 397  Q
    |||||||    
T  32955 actaatc 32961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 53 - 160
Target Start/End: Complemental strand, 32638965 - 32638865
Alignment:
Q  53 gatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtcaattttccgatatgtatcagaagagtatccaaagattaaatt 152  Q
    |||||||||||||||| |||||| |||||| | |||| ||||||||| ||||| ||        |||||| ||||| | |||||||||||| ||||||||    
T  32638965 gatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatacctg-------cccgatacgtatccggagagtatccaaatattaaatt 32638873  T
Q  153 ttattttt 160  Q
    ||||||||    
T  32638872 ttattttt 32638865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 398
Target Start/End: Original strand, 38388954 - 38389044
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||||||  | ||||||||||| ||||||||| |||||| |||| ||| |||||  ||||| ||||||||  |||||||| |||||||||    
T  38388954 atatagtataacactaacaatgttcattttggataaaatatagcactcatgatgctc--tttggtatatattgtgtatgtaattgactaatca 38389044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 350
Target Start/End: Original strand, 19436637 - 19436696
Alignment:
Q  293 ttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataaca 350  Q
    |||||||||||||  ||||||||||  | ||||||||||||||||||||||| |||||||    
T  19436637 ttcttttttggatcgatatagtatagcattaacaatgttccttttggatatagtataaca 19436696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 293 - 350
Target Start/End: Original strand, 19572786 - 19572845
Alignment:
Q  293 ttcttttttggat--atatagtatatgaataacaatgttccttttggatataatataaca 350  Q
    |||||||||||||  ||||||||||  | ||||||||||||||||||||||| |||||||    
T  19572786 ttcttttttggatcgatatagtatagcattaacaatgttccttttggatatagtataaca 19572845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 41 - 160
Target Start/End: Original strand, 25022122 - 25022244
Alignment:
Q  41 ttgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagta 137  Q
    |||||||||| | ||||||||||||||| ||| || |||||| | |||| ||||||||| ||||| || |    | || | |||| ||||| | ||||||    
T  25022122 ttgtgaagccccaatacttcaaaatggatgacataccgtatctcctgcgtatcctgcaccgatacctgcccgatacttcctgatacgtatcgggagagta 25022221  T
Q  138 tccaaagattaaattttattttt 160  Q
    |||||| ||||||||||||||||    
T  25022222 tccaaatattaaattttattttt 25022244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 400
Target Start/End: Original strand, 32877906 - 32877962
Alignment:
Q  344 tataacactaatggtgctctttttgggatatattggatatgtaatcgactaatcacc 400  Q
    ||||||||| |||||||||||||||| |||| |||  |||||||| |||||||||||    
T  32877906 tataacactgatggtgctctttttggtatattttgcgtatgtaattgactaatcacc 32877962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 39 - 99
Target Start/End: Original strand, 40412430 - 40412490
Alignment:
Q  39 atttgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcac 99  Q
    |||||||||||| | ||||||||||||||| || |||||||||| | |||| |||||||||    
T  40412430 atttgtgaagccccaatacttcaaaatggatgatgtatcgtatcccctgcgtatcctgcac 40412490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 344 - 396
Target Start/End: Complemental strand, 43770973 - 43770921
Alignment:
Q  344 tataacactaatggtgctctttttgggatatattggatatgtaatcgactaat 396  Q
    ||||||||| |||||||||||||||| ||||||||  |||||||| |||||||    
T  43770973 tataacactgatggtgctctttttggtatatattgcgtatgtaattgactaat 43770921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 105
Target Start/End: Complemental strand, 28876686 - 28876623
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatac 105  Q
    ||||||||| ||||||||||||||||| ||||||  ||||| | |||| ||||||||| |||||    
T  28876686 tgtgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatac 28876623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 5539500 - 5539541
Alignment:
Q  117 ccgatatgtatcagaagagtatccaaagattaaattttattt 158  Q
    |||||||||||| | |||||||||||| ||||||||||||||    
T  5539500 ccgatatgtatccggagagtatccaaatattaaattttattt 5539541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 347
Target Start/End: Original strand, 6028875 - 6028931
Alignment:
Q  293 ttcttttttggat--atatagtatatgaataacaatgttccttttggatataatata 347  Q
    |||||||||||||  ||||||||||  | ||||||||||||||||||||||| ||||    
T  6028875 ttcttttttggatcgatatagtatagcactaacaatgttccttttggatatagtata 6028931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 308
Target Start/End: Complemental strand, 12579911 - 12579875
Alignment:
Q  271 ttaactcttgagtactgatgtgttcttttttggatata 308  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  12579911 ttaactctt-agtactgatgtgttcttttttggatata 12579875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 308
Target Start/End: Original strand, 32760098 - 32760134
Alignment:
Q  271 ttaactcttgagtactgatgtgttcttttttggatata 308  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  32760098 ttaactctt-agtactgatgtgttcttttttggatata 32760134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 293 - 347
Target Start/End: Original strand, 32877840 - 32877896
Alignment:
Q  293 ttcttttttggat--atatagtatatgaataacaatgttccttttggatataatata 347  Q
    |||||||||||||  ||||||||||  | ||||||||||||||||||||||| ||||    
T  32877840 ttcttttttggatcgatatagtatagcactaacaatgttccttttggatatagtata 32877896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 396
Target Start/End: Original strand, 4246778 - 4246830
Alignment:
Q  344 tataacactaatggtgctctttttgggatatattggatatgtaatcgactaat 396  Q
    ||||||| | |||||||||||||||| ||||||||  |||||||| |||||||    
T  4246778 tataacaatgatggtgctctttttggtatatattgcgtatgtaattgactaat 4246830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 53 - 105
Target Start/End: Complemental strand, 19948105 - 19948053
Alignment:
Q  53 gatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatac 105  Q
    |||||||||||||||| |||||||| |||| | |||| ||||||||| |||||    
T  19948105 gatacttcaaaatggatgacgtatcatatcccctgcgtatcctgcaccgatac 19948053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 344 - 396
Target Start/End: Complemental strand, 32638483 - 32638431
Alignment:
Q  344 tataacactaatggtgctctttttgggatatattggatatgtaatcgactaat 396  Q
    |||| |||| |||||||||||||||| ||||||||  |||||||| |||||||    
T  32638483 tatagcactgatggtgctctttttggtatatattgcgtatgtaattgactaat 32638431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 55; Significance: 2e-22; HSPs: 2)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 52 - 233
Target Start/End: Original strand, 13258 - 13439
Alignment:
Q  52 cgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtca---attttccgatatgtatcagaagagtatccaaagatta 148  Q
    ||||||||||||||||| ||||||||||||| | |||| ||||||||| ||||| |||||   | || |||||| ||||||  ||||||||  |||||||    
T  13258 cgatacttcaaaatggatgacgtatcgtatctcctgcgtatcctgcaccgatacctgtcagatacttcccgatacgtatcaagagagtatctgaagatta 13357  T
Q  149 aattttatttttnnnnnnnntaaaattatccgatacttcctgatacatatcaggagagtatctgatgattattctgcaccgatat 233  Q
    ||||||||||||         | ||||||||||| ||||||||||| |||||| |||||||  ||| ||||| ||||||||||||    
T  13358 aattttatttttttaaaa---ataattatccgatgcttcctgatacttatcagaagagtattcgataattatcctgcaccgatat 13439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 306 - 398
Target Start/End: Original strand, 13664 - 13756
Alignment:
Q  306 atatagtatatgaataacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||||||  | ||||||||| | |||| |||||| |||||||||||| ||||||||||||  ||||||||  ||||| || |||||||||    
T  13664 atatagtataacagtaacaatgtacattttagatatagtataacactaattgtgctctttttgatatatattgtgtatgtcattgactaatca 13756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 27901 - 27790
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtcaattttccgatatgtatcagaagagtatcca 141  Q
    ||||||||| ||||||||||||||||| |||||| |||||| | |||  ||||||||| ||||| ||       ||||||| ||||| | ||||||||||    
T  27901 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcatatcctgcaccgatacctg-------tccgatacgtatccgcagagtatcca 27809  T
Q  142 aagattaaattttattttt 160  Q
    || ||||||||||||||||    
T  27808 aatattaaattttattttt 27790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 307
Target Start/End: Complemental strand, 27160 - 27125
Alignment:
Q  271 ttaactcttgagtactgatgtgttcttttttggatat 307  Q
    ||||||||| |||||||||||||||||||||||||||    
T  27160 ttaactctt-agtactgatgtgttcttttttggatat 27125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0640 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0640
Description:

Target: scaffold0640; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 160
Target Start/End: Complemental strand, 8212 - 8091
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtat 138  Q
    ||||||||| ||||||||||||||||| || ||| |||||| | |||| ||||||||| ||||| || |    | || |||||| ||||| | |||||||    
T  8212 tgtgaagccccgatacttcaaaatggatgatgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatccggagagtat 8113  T
Q  139 ccaaagattaaattttattttt 160  Q
    ||||| ||||||||||||||||    
T  8112 ccaaatattaaattttattttt 8091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 160
Target Start/End: Original strand, 5514 - 5631
Alignment:
Q  46 aagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtc---aattttccgatatgtatcagaagagtatccaa 142  Q
    ||||| ||||||||||||||||| |||||| |||||| | |||| ||||||||| ||||| || |    | || |||||| ||||| | |||||||||||    
T  5514 aagccccgatacttcaaaatggacgacgtaccgtatcccctgcgtatcctgcaccgatacctgcccgatacttcccgatacgtatcgggagagtatccaa 5613  T
Q  143 agattaaattttattttt 160  Q
    | ||||||||||||||||    
T  5614 atattaaattttattttt 5631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 320 - 398
Target Start/End: Complemental strand, 202593 - 202515
Alignment:
Q  320 taacaatgttccttttggatataatataacactaatggtgctctttttgggatatattggatatgtaatcgactaatca 398  Q
    ||||||| || ||||||||||||| |||||| | ||| || ||||||||||||||| || ||||||||| |||||||||    
T  202593 taacaatatttcttttggatataacataacatttatgatgttctttttgggatatactgtatatgtaattgactaatca 202515  T

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Target: scaffold0005; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 42 - 105
Target Start/End: Complemental strand, 44710 - 44647
Alignment:
Q  42 tgtgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatac 105  Q
    ||||||||| ||||||||||||||||| |||||| |||||| | |||| ||||||||| |||||    
T  44710 tgtgaagccccgatacttcaaaatggatgacgtaccgtatcccctgcgtatcctgcaccgatac 44647  T

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Target: scaffold0112 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 160
Target Start/End: Complemental strand, 42183 - 42075
Alignment:
Q  44 tgaagcctcgatacttcaaaatggaagacgtatcgtatcacttgcggatcctgcactgatacatgtcaattttccgatatgtatcagaagagtatccaaa 143  Q
    ||||||| ||||||||||||||||| ||||||  ||||| | |||| ||||||||| |||||        || |||||| |||||   ||||||||||||    
T  42183 tgaagccccgatacttcaaaatggatgacgtactgtatcccctgcgtatcctgcaccgatac--------ttcccgatacgtatctagagagtatccaaa 42092  T
Q  144 gattaaattttattttt 160  Q
     ||||||||||||||||    
T  42091 tattaaattttattttt 42075  T

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Target: scaffold0112; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 308
Target Start/End: Complemental strand, 41458 - 41422
Alignment:
Q  271 ttaactcttgagtactgatgtgttcttttttggatata 308  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  41458 ttaactctt-agtactgatgtgttcttttttggatata 41422  T

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