View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5186_high_6 (Length: 252)
Name: NF5186_high_6
Description: NF5186
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5186_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 14 - 233
Target Start/End: Original strand, 37813597 - 37813816
Alignment:
| Q |
14 |
ggacatcatcttgtatatactactccacttcaaaatattcttgtcttaagcaaaaattgtatgagatttataaaacacttaccaaaaatatataccgaag |
113 |
Q |
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| T |
37813597 |
ggacatgatcttgtatatactactccacttcaaaatattcttgtcttaagcaaaaattgtatgagatttataaaacacttaccaaaaatatataccgaag |
37813696 |
T |
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| Q |
114 |
tgccaatgaaaattgagttgccaactcctccaatgctttgtgcaaaaattgctgccaagcatcccaatccacctcctacaatggtacctattccacgatt |
213 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37813697 |
tgccaatgaaaattgagttgccaactcctccaatgctttgtgcaaaaattgctgccaagcatcccaatccacctcctacaatggtacctattccacgatt |
37813796 |
T |
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| Q |
214 |
caagccttttcctagtgtag |
233 |
Q |
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|||||||||||||||||||| |
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| T |
37813797 |
caagccttttcctagtgtag |
37813816 |
T |
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