View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5189-Insertion-10 (Length: 290)

Name: NF5189-Insertion-10
Description: NF5189
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5189-Insertion-10
NF5189-Insertion-10
[»] chr6 (1 HSPs)
chr6 (8-290)||(3844240-3844522)


Alignment Details
Target: chr6 (Bit Score: 271; Significance: 1e-151; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 271; E-Value: 1e-151
Query Start/End: Original strand, 8 - 290
Target Start/End: Original strand, 3844240 - 3844522
Alignment:
Q  8 ataatcatcaatgttaaatattgttttgaacaaaaaattcaatgaacaaaactagaagcttccatacacctatgatcttgatggaagacggctacaaaag 107  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3844240 ataatcataaatgttaaatattgttttgaacaaaaaattcaatgaacaaaactagaagcttccatacacctatgatcttgatggaaaacggctacaaaag 3844339  T
Q  108 gcaaattgcacattctttaatagcagaacagtattcgttgatacagagatcaaggagaacgaatcaaatagagatttgagacagcgtaatatagtaaata 207  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3844340 gcaaattgcacattctttaatagcagaacagttttcgttgatacagagatcaaggagaacgaatcaaatagagatttgagacagcgtaatatagtaaata 3844439  T
Q  208 ttaacattccaaaataataaaaatttaccgacattcacaaaaattagatttatgcaatcagtttccatactaatttcattatg 290  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3844440 ttaacattccaaaataataaaaatttaccgacattcacaaaaattagatttatgcaatcagtttccatactaatttcattatg 3844522  T

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