View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5189_high_7 (Length: 442)

Name: NF5189_high_7
Description: NF5189
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5189_high_7
NF5189_high_7
[»] chr7 (28 HSPs)
chr7 (18-352)||(47837202-47837539)
chr7 (350-436)||(24001029-24001115)
chr7 (352-436)||(42538448-42538532)
chr7 (353-436)||(41861674-41861759)
chr7 (352-436)||(5810941-5811025)
chr7 (353-436)||(5194248-5194331)
chr7 (356-433)||(26898422-26898499)
chr7 (353-436)||(24280613-24280696)
chr7 (353-436)||(35069721-35069804)
chr7 (353-436)||(43317443-43317526)
chr7 (354-436)||(31408650-31408732)
chr7 (355-436)||(4638216-4638297)
chr7 (355-436)||(44326180-44326261)
chr7 (352-436)||(31513286-31513370)
chr7 (353-436)||(5015395-5015478)
chr7 (353-436)||(9216302-9216384)
chr7 (353-436)||(27535248-27535331)
chr7 (353-436)||(42972852-42972935)
chr7 (345-436)||(45326012-45326103)
chr7 (355-436)||(10573751-10573832)
chr7 (353-436)||(40236919-40237002)
chr7 (355-436)||(43343641-43343722)
chr7 (355-436)||(44416951-44417032)
chr7 (355-436)||(16180374-16180454)
chr7 (369-436)||(27393277-27393344)
chr7 (362-433)||(32029837-32029908)
chr7 (353-386)||(38160661-38160694)
chr7 (352-420)||(39998407-39998475)
[»] chr5 (13 HSPs)
chr5 (353-436)||(41334680-41334763)
chr5 (347-436)||(2614666-2614755)
chr5 (353-436)||(7617133-7617216)
chr5 (353-436)||(18033982-18034065)
chr5 (351-436)||(22512303-22512388)
chr5 (353-436)||(38470579-38470662)
chr5 (355-436)||(5256997-5257078)
chr5 (347-436)||(33801463-33801552)
chr5 (348-428)||(33855068-33855148)
chr5 (342-436)||(32473411-32473505)
chr5 (355-435)||(25915006-25915085)
chr5 (353-436)||(17208074-17208157)
chr5 (353-436)||(30622736-30622818)
[»] chr3 (26 HSPs)
chr3 (352-436)||(36150129-36150213)
chr3 (353-436)||(54246165-54246248)
chr3 (354-436)||(40480750-40480832)
chr3 (350-436)||(42100685-42100771)
chr3 (354-436)||(54237097-54237179)
chr3 (355-436)||(27748565-27748646)
chr3 (351-436)||(45126945-45127030)
chr3 (355-436)||(53581875-53581956)
chr3 (353-436)||(4190282-4190365)
chr3 (353-436)||(24688419-24688502)
chr3 (353-436)||(25413681-25413764)
chr3 (354-436)||(42394436-42394518)
chr3 (353-436)||(40808865-40808948)
chr3 (353-436)||(46941053-46941136)
chr3 (353-436)||(47191043-47191125)
chr3 (353-436)||(10457909-10457992)
chr3 (353-436)||(53273701-53273784)
chr3 (353-436)||(9434124-9434207)
chr3 (353-436)||(25996268-25996351)
chr3 (345-436)||(1078219-1078309)
chr3 (357-436)||(29558251-29558330)
chr3 (353-436)||(52627994-52628077)
chr3 (351-388)||(34791827-34791864)
chr3 (368-436)||(51249323-51249391)
chr3 (350-436)||(51757590-51757676)
chr3 (395-436)||(52629870-52629911)
[»] chr8 (26 HSPs)
chr8 (350-436)||(11582763-11582849)
chr8 (353-436)||(36743500-36743583)
chr8 (354-436)||(45397317-45397399)
chr8 (355-436)||(26125637-26125718)
chr8 (351-436)||(29705360-29705445)
chr8 (355-436)||(42699259-42699340)
chr8 (353-433)||(30660762-30660842)
chr8 (353-436)||(5754903-5754986)
chr8 (353-436)||(42197452-42197535)
chr8 (353-435)||(2165981-2166063)
chr8 (355-436)||(29800967-29801048)
chr8 (355-436)||(42295197-42295278)
chr8 (353-436)||(16603643-16603726)
chr8 (355-436)||(20148762-20148843)
chr8 (355-436)||(30912579-30912660)
chr8 (353-436)||(18066735-18066818)
chr8 (353-436)||(35181516-35181599)
chr8 (352-436)||(1375541-1375625)
chr8 (353-436)||(2546996-2547079)
chr8 (353-436)||(34304788-34304871)
chr8 (355-436)||(33630010-33630091)
chr8 (353-397)||(19386626-19386670)
chr8 (361-436)||(31384672-31384747)
chr8 (355-436)||(3743773-3743854)
chr8 (351-388)||(28977144-28977181)
chr8 (353-392)||(10678201-10678240)
[»] scaffold0003 (1 HSPs)
scaffold0003 (355-436)||(45736-45817)
[»] chr6 (18 HSPs)
chr6 (355-436)||(27441544-27441625)
chr6 (352-436)||(30014342-30014426)
chr6 (353-436)||(7292747-7292830)
chr6 (353-436)||(9698350-9698433)
chr6 (353-436)||(7273352-7273435)
chr6 (351-436)||(13743238-13743323)
chr6 (351-436)||(13748738-13748823)
chr6 (353-436)||(7367549-7367632)
chr6 (353-436)||(26670026-26670109)
chr6 (353-436)||(3213400-3213483)
chr6 (353-436)||(26466799-26466882)
chr6 (355-436)||(24204004-24204085)
chr6 (355-436)||(30735984-30736065)
chr6 (353-436)||(21279929-21280012)
chr6 (353-436)||(33242403-33242486)
chr6 (353-436)||(21293694-21293777)
chr6 (353-398)||(31109277-31109322)
chr6 (348-436)||(33253908-33253996)
[»] chr2 (29 HSPs)
chr2 (351-436)||(1750412-1750497)
chr2 (351-436)||(16096745-16096830)
chr2 (353-436)||(12302270-12302353)
chr2 (354-436)||(19047158-19047240)
chr2 (355-435)||(43490419-43490499)
chr2 (343-436)||(43335780-43335873)
chr2 (353-435)||(14285676-14285758)
chr2 (353-436)||(4764743-4764826)
chr2 (353-436)||(16803968-16804051)
chr2 (353-436)||(16843250-16843333)
chr2 (353-436)||(30838632-30838715)
chr2 (353-436)||(43114557-43114640)
chr2 (355-436)||(11825671-11825752)
chr2 (348-392)||(42849907-42849951)
chr2 (353-436)||(966851-966934)
chr2 (353-436)||(18491705-18491788)
chr2 (350-436)||(12415477-12415563)
chr2 (350-436)||(12427537-12427623)
chr2 (355-432)||(33229303-33229381)
chr2 (355-436)||(4299437-4299518)
chr2 (355-436)||(41281991-41282072)
chr2 (349-393)||(7070412-7070456)
chr2 (354-436)||(34817793-34817875)
chr2 (355-436)||(8896600-8896681)
chr2 (395-432)||(39149313-39149350)
chr2 (348-380)||(42849962-42849994)
chr2 (353-436)||(42026767-42026852)
chr2 (355-436)||(6518486-6518566)
chr2 (351-436)||(13780752-13780837)
[»] scaffold0187 (2 HSPs)
scaffold0187 (353-436)||(14205-14288)
scaffold0187 (353-436)||(24533-24616)
[»] chr4 (34 HSPs)
chr4 (353-436)||(1771283-1771366)
chr4 (353-436)||(55966363-55966446)
chr4 (349-435)||(27316731-27316817)
chr4 (352-433)||(12496955-12497036)
chr4 (353-436)||(711960-712043)
chr4 (353-436)||(25051693-25051776)
chr4 (353-435)||(21687006-21687088)
chr4 (353-436)||(27864564-27864647)
chr4 (353-436)||(28982839-28982922)
chr4 (350-436)||(17619169-17619255)
chr4 (356-436)||(23204795-23204875)
chr4 (353-436)||(48463467-48463550)
chr4 (354-436)||(41878407-41878489)
chr4 (348-433)||(27550304-27550389)
chr4 (355-436)||(27893859-27893940)
chr4 (355-436)||(43735744-43735825)
chr4 (352-436)||(55272393-55272477)
chr4 (353-436)||(23035980-23036063)
chr4 (353-436)||(33703141-33703224)
chr4 (349-436)||(35017729-35017815)
chr4 (355-436)||(3756263-3756344)
chr4 (355-436)||(43514703-43514784)
chr4 (353-436)||(32728357-32728440)
chr4 (353-435)||(28988473-28988555)
chr4 (355-436)||(43949818-43949900)
chr4 (355-436)||(35037007-35037088)
chr4 (353-433)||(960890-960970)
chr4 (350-392)||(36004165-36004207)
chr4 (355-436)||(39631102-39631184)
chr4 (355-436)||(31680904-31680985)
chr4 (355-436)||(41327560-41327641)
chr4 (353-436)||(46827723-46827806)
chr4 (351-436)||(45490330-45490415)
chr4 (353-433)||(49229684-49229764)
[»] chr1 (23 HSPs)
chr1 (353-436)||(5489776-5489859)
chr1 (352-436)||(43571103-43571187)
chr1 (351-436)||(38335916-38336001)
chr1 (351-436)||(48119626-48119711)
chr1 (352-436)||(35003293-35003377)
chr1 (353-436)||(37814778-37814861)
chr1 (355-436)||(2497579-2497660)
chr1 (355-436)||(7447828-7447908)
chr1 (353-436)||(38113212-38113295)
chr1 (353-436)||(44112677-44112760)
chr1 (345-436)||(45639749-45639840)
chr1 (353-436)||(46168383-46168466)
chr1 (353-436)||(48498979-48499062)
chr1 (352-433)||(50448280-50448361)
chr1 (353-436)||(23989540-23989624)
chr1 (355-436)||(4401329-4401411)
chr1 (353-429)||(24769523-24769599)
chr1 (353-436)||(41065153-41065236)
chr1 (353-435)||(750323-750405)
chr1 (353-398)||(14427347-14427392)
chr1 (353-436)||(45427762-45427845)
chr1 (351-392)||(4888053-4888094)
chr1 (350-387)||(35000179-35000216)
[»] scaffold0157 (1 HSPs)
scaffold0157 (352-433)||(23441-23522)
[»] scaffold0038 (1 HSPs)
scaffold0038 (354-436)||(112656-112738)
[»] scaffold0385 (1 HSPs)
scaffold0385 (353-436)||(11251-11334)
[»] scaffold0119 (1 HSPs)
scaffold0119 (353-436)||(685-768)
[»] scaffold0100 (1 HSPs)
scaffold0100 (352-436)||(35473-35557)


Alignment Details
Target: chr7 (Bit Score: 289; Significance: 1e-162; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 18 - 352
Target Start/End: Original strand, 47837202 - 47837539
Alignment:
Q  18 atgctttgtgtgttatggttgatatatatgtacttatagtggagggttttctttcttagcatccaagaacatgaattactacagaattattaggtcgttg 117  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47837202 atgctttgtgtgttatggttgatatatatgtacttttggtggagggttttctttcttagcatccaagaacatgaattactacagaattattaggtcgttg 47837301  T
Q  118 agtattattgatcaaaggagagacaaaaatatgtaaataactaacgagtcaaatataatatataattggtcaaatctcgggttaggtatatatcagttga 217  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  47837302 agtattattgatcaaaggagagacaaaaatatataaataactaacgagtcaaatataatatataattggtcaaa--tcgggttaggtatatatcagttga 47837399  T
Q  218 atgatattgtgaaatacaccgcaatacaaaattgcctacatagatagatagatagatcaccccctattctatgctatagctgc-----ctgtacctggct 312  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||     ||||||||||||    
T  47837400 atgatattgtgaaatacaccgcaatacaaaattggctagatagatagatagatagatcaccccctattctatgctatagctgcctgtactgtacctggct 47837499  T
Q  313 acaaatggacatgtctaaagtaatttgatgtatattatat 352  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  47837500 acaaatggacatgtctaaagtaatttgatgtatattatat 47837539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 350 - 436
Target Start/End: Complemental strand, 24001115 - 24001029
Alignment:
Q  350 tatggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||||||||||| |||| |||||| |||| |||||||||||  ||||||||||||||||||||||||    
T  24001115 tatggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 24001029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 352 - 436
Target Start/End: Complemental strand, 42538532 - 42538448
Alignment:
Q  352 tggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||||||||| |||| |||||| |||| |||||||||||  ||||||||||||||||||||||||    
T  42538532 tggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 42538448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 41861674 - 41861759
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtat--taaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||  || ||||||||||||||||| |||||||    
T  41861674 ggaaaatgttacatgaacaccctttattcatacacccaattatacaccctatgtattatagagatattttggtaagtttatctcac 41861759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 352 - 436
Target Start/End: Complemental strand, 5811025 - 5810941
Alignment:
Q  352 tggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||| |||||||||||| ||||||||||| |||| ||||| |||||  ||||||||| ||||||||||||||    
T  5811025 tggaaaatgttacatgaccaccctttattcctacaccccattgtacaccctatatattagggatattttgataagttcatctcac 5810941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 5194331 - 5194248
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||| |||||||||||||| |||| |||| ||||||| |||| ||||||||| ||| ||||||||||    
T  5194331 ggaaaatgttacatgaacaccatttattcatacacctcattgtacaccctatgttttaaggatattttgataaattcatctcac 5194248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 356 - 433
Target Start/End: Complemental strand, 26898499 - 26898422
Alignment:
Q  356 aaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatct 433  Q
    |||||||||||||||||| ||||||||||||||| ||| ||||| | ||||||||  |||||||||||||||||||||    
T  26898499 aaatgttacatgaacaccttttattcatacacccaattgtacattccatgtattagggatattttggtaagttcatct 26898422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 24280696 - 24280613
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||| |||||||||||||||||||||||| ||| ||||||| ||| | || | |||||||||||| ||||||||||    
T  24280696 ggaaaatgttacgtgaacaccctttattcatacaccctattctacatcccatgcactagaaatattttggtaaattcatctcac 24280613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 35069721 - 35069804
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||| |||||||| |||||| |||| |||| |  ||||||||  ||||||||||||||||||||||||    
T  35069721 ggaaaatgttacatgaacactctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcac 35069804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 43317443 - 43317526
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||| |||||||||||||| |||| |||||||||||  |||  ||||||||| ||| ||||||||||    
T  43317443 ggaaaatgttacatgaacaccatttattcatacacctcattgtacatcctatgctttagggatattttgataaattcatctcac 43317526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 354 - 436
Target Start/End: Complemental strand, 31408732 - 31408650
Alignment:
Q  354 gaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||| |||||||| | ||| ||||||| ||| ||||| ||||||||||||| ||||| ||||    
T  31408732 gaaaatgttacatgaacaccctttaatcatacactctattgtacatcccatgcattaaggatattttggtaaattcatttcac 31408650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 355 - 436
Target Start/End: Complemental strand, 4638297 - 4638216
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||| ||||||||||||| | ||| |||| || || |||||  ||||||||||||||||||||||||    
T  4638297 aaaatgttacatgaacaccttttattcatacactcaattgtacaccccatatattatggatattttggtaagttcatctcac 4638216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 355 - 436
Target Start/End: Original strand, 44326180 - 44326261
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||| ||||||||||||||||||| |||||| |||| |  || |||||  ||||||||||||||||||||||||    
T  44326180 aaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcac 44326261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 352 - 436
Target Start/End: Original strand, 31513286 - 31513370
Alignment:
Q  352 tggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||| ||||| |||||||||| ||| || | || ||| ||||| ||||||||||||| ||||||||||    
T  31513286 tggaaaatgttacatgaacactctttaatcatacaccctattgtataccccatgcattaaggatattttggtaaattcatctcac 31513370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 5015395 - 5015478
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||| |||||||  ||||| ||||| |||| |  ||||||||  ||||||||||||||||||||||||    
T  5015395 ggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcac 5015478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 9216302 - 9216384
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||||| || | || ||| |||| || ||| |||| |||||||||||||||||||||||||    
T  9216302 ggaaaatgttacatgaacaccctttattcctatatcctattgtaca-cccatgcattagagatattttggtaagttcatctcac 9216384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 27535331 - 27535248
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||||| |||||||| | ||| ||||  | |||| ||||||| |||||||||| ||||||||||    
T  27535331 ggaaaatgttacatgaacaccctttaatcatacactctattgtacactccatgtgttaaagacattttggtaatttcatctcac 27535248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 42972852 - 42972935
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||| |||||| ||||||||| ||||| ||||| |||| |  ||||||||  ||||||||||||||||||||||||    
T  42972852 ggaaaatgttacctgaacatcctttattcctacactccattgtacacctcatgtattagggatattttggtaagttcatctcac 42972935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 345 - 436
Target Start/End: Original strand, 45326012 - 45326103
Alignment:
Q  345 tattatatggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||| ||||||| |||||||| |||||| |||||||||||| | |||| |||| || || |||||  ||||||||||||||||||||||||    
T  45326012 tattaaatggaaagtgttacataaacaccttttattcatacatcacattgtacaccccatatattagggatattttggtaagttcatctcac 45326103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 436
Target Start/End: Original strand, 10573751 - 10573832
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||| ||||||||||||||||||| || ||| |||| || ||||||||   |||||||||||| ||||||||||    
T  10573751 aaaatgttacataaacaccctttattcatacatcctattgtacaccccatgtattaggaatattttggtaaattcatctcac 10573832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 40236919 - 40237002
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||||| ||||||| || ||| |||| || ||| ||||  || |||||||||| ||||||||||    
T  40236919 ggaaaatgttacatgaacaccctttaatcatacatcctattgtacaccccatgcattagggacattttggtaatttcatctcac 40237002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 355 - 436
Target Start/End: Complemental strand, 43343722 - 43343641
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||| | ||||||  ||||||| ||| |||| || ||||||||  ||||||||| ||||||||||||||    
T  43343722 aaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcac 43343641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 355 - 436
Target Start/End: Complemental strand, 44417032 - 44416951
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||| | ||||||  ||||||| ||| |||| || ||||||||  ||||||||| ||||||||||||||    
T  44417032 aaaatgttacatgaacatcatttatttctacaccctattgtacaccccatgtattagggatattttgataagttcatctcac 44416951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 355 - 436
Target Start/End: Complemental strand, 16180454 - 16180374
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||| |||||| ||||||| |||| |||||| |||| || | |||||| | |||||||||||| ||||||||||    
T  16180454 aaaatgttacatcaacaccatttattcctaca-cccattgtacaccccacgtattataaatattttggtaaattcatctcac 16180374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 436
Target Start/End: Complemental strand, 27393344 - 27393277
Alignment:
Q  369 acaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||| |||| || ||| ||||  ||||||||||  |||||||| |||||||||||||||    
T  27393344 acaccctttattcctacatcctattgtacactctatgtattagggatatttttgtaagttcatctcac 27393277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 362 - 433
Target Start/End: Complemental strand, 32029908 - 32029837
Alignment:
Q  362 tacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatct 433  Q
    ||||| |||||  ||||||| ||||||||||| |||| || ||||||||  ||||||||||||| |||||||    
T  32029908 tacataaacactttttattcctacaccccattgtacaccccatgtattagggatattttggtaaattcatct 32029837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 353 - 386
Target Start/End: Complemental strand, 38160694 - 38160661
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcataca 386  Q
    ||||||||||||||||||||||||||||| ||||    
T  38160694 ggaaaatgttacatgaacaccctttattcctaca 38160661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 420
Target Start/End: Original strand, 39998407 - 39998475
Alignment:
Q  352 tggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatatttt 420  Q
    |||||||||||||||||||||  |||| ||||||| || ||| |||| || ||||||||  ||||||||    
T  39998407 tggaaaatgttacatgaacacattttaatcatacatcctattgtacaccccatgtattagggatatttt 39998475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 3e-30; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 41334763 - 41334680
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||  ||||||||||||||||||||||||    
T  41334763 ggaaaatgttacatgaacaccctttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcac 41334680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 347 - 436
Target Start/End: Complemental strand, 2614755 - 2614666
Alignment:
Q  347 ttatatggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||| |||| |||||||||||  ||||||||||||||||||||||||    
T  2614755 ttatatggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 2614666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 7617133 - 7617216
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||  ||||||||||||||||||||||||    
T  7617133 ggaaaatgttacatgaacaccctttattcatacactccattatacaccccatgtattagggatattttggtaagttcatctcac 7617216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 18033982 - 18034065
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||||| ||||| ||||| |||| |||||||||||  |||||||| |||||||||||||||    
T  18033982 ggaaaatgttacatgaacaccctttattcctacactccattgtacaccctatgtattagggatatttttgtaagttcatctcac 18034065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 351 - 436
Target Start/End: Original strand, 22512303 - 22512388
Alignment:
Q  351 atggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||||||| ||||| ||||| ||||  | ||||||||  ||||||||||||||||||||||||    
T  22512303 atggaaaatgttacatgaacaccctttattcctacactccattgtacactccatgtattagggatattttggtaagttcatctcac 22512388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 38470579 - 38470662
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||| |||||||||||||||||||  ||||| |||| || ||||||||| ||||||||||||| ||||| ||||    
T  38470579 ggaaaatgttacataaacaccctttattcatacattccattgtacaccccatgtattaaggatattttggtaaattcatttcac 38470662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 355 - 436
Target Start/End: Original strand, 5256997 - 5257078
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||| |||||| |||||||||||| |||||| |||| || ||||||||  ||||||||||||| ||||||||||    
T  5256997 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcac 5257078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 347 - 436
Target Start/End: Original strand, 33801463 - 33801552
Alignment:
Q  347 ttatatggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||| ||||||||||||||||||| ||||||||  ||||||||||| ||||  | ||||||||  |||||||| |||||||||||||||    
T  33801463 ttataaggaaaatgttacatgaacatcctttatttctacaccccattgtacactccatgtattagggatattttagtaagttcatctcac 33801552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 348 - 428
Target Start/End: Complemental strand, 33855148 - 33855068
Alignment:
Q  348 tatatggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagtt 428  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||| |||| || ||||||||   | |||||||||||||    
T  33855148 tatacggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattaggaacattttggtaagtt 33855068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 342 - 436
Target Start/End: Complemental strand, 32473505 - 32473411
Alignment:
Q  342 gtatattatatggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||| || ||||||||||||||||||||||||||| |||||||||  ||| |||| |  ||| ||||  ||||||||||||| ||||||||||    
T  32473505 gtatatcatttggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccacatgcattagggatattttggtaatttcatctcac 32473411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 355 - 435
Target Start/End: Complemental strand, 25915085 - 25915006
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctca 435  Q
    ||||||||||||||||||||||||||| |||||| |||| |||| || |||||||| | ||||||| ||| ||||||||||    
T  25915085 aaaatgttacatgaacaccctttattcctacacctcattgtacacccaatgtattaga-atatttttgtaggttcatctca 25915006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 17208074 - 17208157
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||| ||||||||||||| ||||||||   ||| |||| || ||| ||||| || |||||||||| ||||||||||    
T  17208074 ggaaaatgttacgtgaacaccctttaatcatacactttattgtacaccccatgcattaaggacattttggtaaattcatctcac 17208157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 30622818 - 30622736
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||| |||||| |||||||||| ||| || | || ||| ||||| ||||||||||||| || |||||||    
T  30622818 ggaaaatgttacatgaacatcctttaatcatacaccctattgta-agcccatgcattaaggatattttggtaaatttatctcac 30622736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 352 - 436
Target Start/End: Original strand, 36150129 - 36150213
Alignment:
Q  352 tggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |  ||||||||||||||||||||||||    
T  36150129 tggaaaatgttacatgaataccctttattcatacaccccattatacaccctatgtatcagggatattttggtaagttcatctcac 36150213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 54246248 - 54246165
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||||| ||||||||| |||||||||||||||    
T  54246248 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagagatatttttgtaagttcatctcac 54246165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 354 - 436
Target Start/End: Original strand, 40480750 - 40480832
Alignment:
Q  354 gaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||  ||||||||||||||||||||||||    
T  40480750 gaaaatgttacatgaacaccctttattcatatgccccattgtacatcctatgtattagggatattttggtaagttcatctcac 40480832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 350 - 436
Target Start/End: Original strand, 42100685 - 42100771
Alignment:
Q  350 tatggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||||||||||| |||||| |||| |||| || ||||||||  ||||||||||||||||||||||||    
T  42100685 tatggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcac 42100771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 354 - 436
Target Start/End: Original strand, 54237097 - 54237179
Alignment:
Q  354 gaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||||||| |||| |||||| |||| |||||||||||  ||||||||||||||||||||||||    
T  54237097 gaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 54237179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 355 - 436
Target Start/End: Original strand, 27748565 - 27748646
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||| |||||||||||||| ||||||||| | |||||||||  ||||||||||||||||||||||||    
T  27748565 aaaatgttacatgaacaccttttattcatacacctcattatacaccttatgtattagggatattttggtaagttcatctcac 27748646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 351 - 436
Target Start/End: Complemental strand, 45127030 - 45126945
Alignment:
Q  351 atggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||| ||||||||||||||||||| |||||| |||| || ||||||||  ||||||||||||||||||||||||    
T  45127030 atggaaaatgttacataaacaccctttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcac 45126945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 355 - 436
Target Start/End: Complemental strand, 53581956 - 53581875
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||| |||||||||||||| ||||| ||||||||||||||||  ||||||||| ||||||||||||||    
T  53581956 aaaatgttacatgaacactctttattcatacactccattgtacatcctatgtattagggatattttgataagttcatctcac 53581875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 4190365 - 4190282
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||||| |||||||||| ||| |||| | ||||||||| |||||||||||||| ||||||||||    
T  4190365 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccttatgtattagagatattttggtaaattcatctcac 4190282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 24688502 - 24688419
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||||  ||||| ||||| |||| |||||||||||  ||||||||||||||||||||||||    
T  24688502 ggaaaatgttacatgaacaccctttatttctacactccattgtacaccctatgtattagggatattttggtaagttcatctcac 24688419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 25413681 - 25413764
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||| | |||||||||  |||||||| |||||||||||||||    
T  25413681 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattagggatatttttgtaagttcatctcac 25413764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 354 - 436
Target Start/End: Complemental strand, 42394518 - 42394436
Alignment:
Q  354 gaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||||||| ||||  ||||| |||| |||||||||||  ||||||||||||||||||||||||    
T  42394518 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcac 42394436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 40808865 - 40808948
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||| |||||| ||||||| ||||||||||| |||| || ||||||||  ||||||||||||||||||||||||    
T  40808865 ggaaaatgttacatcaacaccatttattcctacaccccattgtacaccccatgtattagggatattttggtaagttcatctcac 40808948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 46941053 - 46941136
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||||| |||| | |||| |||| || ||||||||  ||||||||||||||||||||||||    
T  46941053 ggaaaatgttacatgaacaccctttattcctacatctcattgtacaccccatgtattagggatattttggtaagttcatctcac 46941136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 47191125 - 47191043
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||||| |||||| |||| |||| || |||||||| |||||||||| ||||||||||||||    
T  47191125 ggaaaatgttacatgaacaccctttattcctacacctcattgtaca-cccatgtattagagatattttgataagttcatctcac 47191043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 10457992 - 10457909
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||| |||| |||||||||| ||| |||| || ||| ||||| ||||||||||||| || |||||||    
T  10457992 ggaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaatttatctcac 10457909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 53273784 - 53273701
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||| ||||||| | ||||||| || ||| |||| ||||||| ||||||||  ||||||||||||||||||||||||    
T  53273784 ggaaaatgttatatgaacatcatttattcctatacctcattgtacatcccatgtattagggatattttggtaagttcatctcac 53273701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 9434124 - 9434207
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||||| |||||||| | ||| |||| || ||| ||||  || |||||||||| ||||||||||    
T  9434124 ggaaaatgttacatgaacaccctttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatctcac 9434207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 25996268 - 25996351
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||||| ||||||| |  ||| |||| || || |||||| || |||||||||| ||||||||||    
T  25996268 ggaaaatgttacatgaacaccctttaatcatacatcttattgtacaccccatatattaaggacattttggtaaattcatctcac 25996351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 345 - 436
Target Start/End: Original strand, 1078219 - 1078309
Alignment:
Q  345 tattatatggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||| |||| ||||||||||||||||||||||||||| | |||| |||| |||| |  ||||||| | |||||||| ||| |||||||||||    
T  1078219 tattttatgaaaaatgttacatgaacaccctttattcctgcacctcattgtacacctaatgtatt-aggatatttttgtaggttcatctcac 1078309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 357 - 436
Target Start/End: Complemental strand, 29558330 - 29558251
Alignment:
Q  357 aatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||| |||||||||||||||||||||| | |||| |||| ||||| |||||   |||| ||||||| ||||||||||    
T  29558330 aatgttatatgaacaccctttattcatacatctcattgtacaccctatatattaggaatatattggtaaattcatctcac 29558251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 52628077 - 52627994
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||| ||||||||||||| ||||||| || ||| |||| |  ||| |||||  |||||||||||| ||||||||||    
T  52628077 ggaaaatgttacgtgaacaccctttaatcatacatcctattgtacacctcatgcattaagtatattttggtaaattcatctcac 52627994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 351 - 388
Target Start/End: Original strand, 34791827 - 34791864
Alignment:
Q  351 atggaaaatgttacatgaacaccctttattcatacacc 388  Q
    |||||||||||||||||||||||||||| |||||||||    
T  34791827 atggaaaatgttacatgaacaccctttaatcatacacc 34791864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 368 - 436
Target Start/End: Original strand, 51249323 - 51249391
Alignment:
Q  368 aacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||  || ||||||||||| |  ||| ||||| ||||||||||||| ||||||||||    
T  51249323 aacaccctttattcacccaacccattatacacctcatgcattaaggatattttggtaaattcatctcac 51249391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 436
Target Start/End: Original strand, 51757590 - 51757676
Alignment:
Q  350 tatggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||| |||||| ||||||||||| |||||||||| ||| |||| |  ||| ||||  || ||||| |||| ||||||||||    
T  51757590 tatggaaaatattacataaacaccctttaatcatacaccctattgtacacctcatgcattatggacattttagtaatttcatctcac 51757676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 436
Target Start/End: Original strand, 52629870 - 52629911
Alignment:
Q  395 tacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||| |||||||||||| |||||||| |||||||||||||||    
T  52629870 tacaccctatgtattaaggatatttttgtaagttcatctcac 52629911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 63; Significance: 3e-27; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 350 - 436
Target Start/End: Original strand, 11582763 - 11582849
Alignment:
Q  350 tatggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||||||||||| |||| |||||| |||| |||||||||||  ||||||||||||||||||||||||    
T  11582763 tatggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 11582849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 36743583 - 36743500
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||||| |||| |||||| |||| |||||||||||  ||||||||||||||||||||||||    
T  36743583 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 36743500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 354 - 436
Target Start/End: Original strand, 45397317 - 45397399
Alignment:
Q  354 gaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||| |||||||||||||||| ||||||||||| |||| |||||||||||  |||||||| |||||||||||||||    
T  45397317 gaaaatgttacgtgaacaccctttattcctacaccccattctacaccctatgtattagggatatttttgtaagttcatctcac 45397399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 355 - 436
Target Start/End: Original strand, 26125637 - 26125718
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||| |||||||||||||||||||  ||||| |||| |||||||||||  ||||||||||||||||||||||||    
T  26125637 aaaatgttacataaacaccctttattcatacattccattgtacaccctatgtattagggatattttggtaagttcatctcac 26125718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 351 - 436
Target Start/End: Original strand, 29705360 - 29705445
Alignment:
Q  351 atggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||||||  ||||||||||| |||| || ||||||||  ||||||||| ||||||||||||||    
T  29705360 atggaaaatgttacatgaacaccctttatttctacaccccattgtacaccccatgtattagggatattttgataagttcatctcac 29705445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 355 - 436
Target Start/End: Original strand, 42699259 - 42699340
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||| ||||||||||| |||| | |||||||||  |||||||| |||||||||||||||    
T  42699259 aaaatgttacatgaacaccctttattcctacaccccattgtacaccttatgtattatggatatttttgtaagttcatctcac 42699340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 353 - 433
Target Start/End: Complemental strand, 30660842 - 30660762
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatct 433  Q
    ||||||||||||||||||||||||||||  |||| |||||| |||| |||||||||||  |||||||||||||||||||||    
T  30660842 ggaaaatgttacatgaacaccctttatttctacatcccattgtacaccctatgtattagggatattttggtaagttcatct 30660762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 5754903 - 5754986
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||| ||||||| |||| |||||| ||||||| || |||||  ||||||||||||||||||||||||    
T  5754903 ggaaaatgttacatgaacaccttttattcctacatcccattgtacatcccatatattagggatattttggtaagttcatctcac 5754986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 42197535 - 42197452
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||| ||||||| |||||||||||  |||  ||||||||||  ||||||||||||||||||||||||    
T  42197535 ggaaaatgttacatgaacaccatttattcctacaccccattgcacacactatgtattagggatattttggtaagttcatctcac 42197452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 353 - 435
Target Start/End: Complemental strand, 2166063 - 2165981
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctca 435  Q
    ||||||| ||||||||||||| ||||||| ||||||||||| || | || |||||||| ||||||||||||||||||||||||    
T  2166063 ggaaaatattacatgaacaccatttattcctacaccccattgtataccccatgtattagagatattttggtaagttcatctca 2165981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 355 - 436
Target Start/End: Complemental strand, 29801048 - 29800967
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||| |||||| |||||||||||| |||||| |||| || ||||||||  ||||||||||||||||||||||||    
T  29801048 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcac 29800967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 355 - 436
Target Start/End: Original strand, 42295197 - 42295278
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||| |||||| |||| ||||  | ||||||||  ||||||||||||||||||||||||    
T  42295197 aaaatgttacatgaacaccctttattcctacacctcattgtacactccatgtattagggatattttggtaagttcatctcac 42295278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 16603726 - 16603643
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||| |||||||||| |||||||||  |||||||| || ||| |||||||| |||||||||| ||||||||||    
T  16603726 ggaaaatgttacatgcacaccctttaatcatacaccttattatacaccccatgcattaaagacattttggtaaattcatctcac 16603643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 355 - 436
Target Start/End: Original strand, 20148762 - 20148843
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||| ||||||||||||||||||| |||||| |||| |  || |||||  ||||||||||||||||||||||||    
T  20148762 aaaatgttacataaacaccctttattcatacatcccattgtacacctcatatattagggatattttggtaagttcatctcac 20148843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 355 - 436
Target Start/End: Complemental strand, 30912660 - 30912579
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||| ||||||||||| ||||    ||||||||  | ||||||||||||||||||||||    
T  30912660 aaaatgttacatgaacaccctttattcctacaccccattgtacacttcatgtattaggggtattttggtaagttcatctcac 30912579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 18066818 - 18066735
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||||| |||||||  | ||| ||||||| ||||||||  |||||||| |||| ||||||||||    
T  18066818 ggaaaatgttacatgaacaccctttaatcatacattctattgtacatcccatgtattagggatattttagtaatttcatctcac 18066735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 35181516 - 35181599
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||||| |||||||||| ||| |||| || ||| ||||  || |||||||||| ||||||||||    
T  35181516 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcac 35181599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 352 - 436
Target Start/End: Original strand, 1375541 - 1375625
Alignment:
Q  352 tggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||| ||||||||||||| ||||||||||||||| ||| |||| || || |||||  ||||||||||||| || |||||||    
T  1375541 tggaaaattttacatgaacaccttttattcatacacccaattgtacaccccatatattagggatattttggtaaatttatctcac 1375625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 2546996 - 2547079
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||| |||||||  ||||| ||||| |||| |  ||||||||  |||||||| |||||||||||||||    
T  2546996 ggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttagtaagttcatctcac 2547079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 34304788 - 34304871
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||| |||||| |||||||||| ||| |||| || ||| ||||  || |||||||||| ||||||||||    
T  34304788 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcac 34304871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 355 - 436
Target Start/End: Complemental strand, 33630091 - 33630010
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||| |||||||||||| ||||||||| |||| |||| |||||| ||||  || ||||| |||| ||||||||||    
T  33630091 aaaatgttacacgaacaccctttaatcatacacctcattgtacaccctatgcattagggacattttagtaatttcatctcac 33630010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 397
Target Start/End: Complemental strand, 19386670 - 19386626
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatac 397  Q
    |||||||||||||||||||||||||| |||||||||| |||||||    
T  19386670 ggaaaatgttacatgaacaccctttaatcatacaccctattatac 19386626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 361 - 436
Target Start/End: Original strand, 31384672 - 31384747
Alignment:
Q  361 ttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||| ||||  | ||| |||| || ||||||||   |||||||||||||||||||||||    
T  31384672 ttacatgaacaccctttattcttacattctattgtacaccccatgtattaggaatattttggtaagttcatctcac 31384747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 355 - 436
Target Start/End: Original strand, 3743773 - 3743854
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||| |||  ||||||||||||||| |  ||||||||||| || || ||||||  |||||||| ||||||||||||||    
T  3743773 aaaatgttccatatacaccctttattcatccctcccattatacaccccatatattaagtatattttgataagttcatctcac 3743854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 351 - 388
Target Start/End: Original strand, 28977144 - 28977181
Alignment:
Q  351 atggaaaatgttacatgaacaccctttattcatacacc 388  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  28977144 atggaaaatgttacatgaacaccctttattcctacacc 28977181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 392
Target Start/End: Complemental strand, 10678240 - 10678201
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccat 392  Q
    ||||||||||||||||| |||||||| |||||||||||||    
T  10678240 ggaaaatgttacatgaataccctttaatcatacaccccat 10678201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 355 - 436
Target Start/End: Complemental strand, 45817 - 45736
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||| ||||||||||||| ||||||||||    
T  45817 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcac 45736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 1e-26; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 355 - 436
Target Start/End: Original strand, 27441544 - 27441625
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||| |||||||||| ||| ||||||||||||||||| ||||||||||||| ||||||||||    
T  27441544 aaaatgttacatgaacaccctttaatcatacaccctattgtacatcctatgtattaaggatattttggtaaattcatctcac 27441625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 352 - 436
Target Start/End: Original strand, 30014342 - 30014426
Alignment:
Q  352 tggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||   |||||||||||||||||||||||    
T  30014342 tggaaaatgttacatgaacaccctttattcctacatcccattatacatcccatgtattaggcatattttggtaagttcatctcac 30014426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 7292747 - 7292830
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||| ||||||| |||||||||||||| ||||||||| |||||||||||  ||||||||||||||||||||||||    
T  7292747 ggaaaatgttacaagaacaccatttattcatacacctcattatacaccctatgtattagggatattttggtaagttcatctcac 7292830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 9698433 - 9698350
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||||| |||| |||||| |||| |||||||||||  ||||||||||||||||||||||||    
T  9698433 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 9698350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 7273435 - 7273352
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||||| ||||||  ||| |||| || |||||||| |||||||||||||||||||||||||    
T  7273435 ggaaaatgttacatgaacaccctttattcctacaccttattgtacaccccatgtattagagatattttggtaagttcatctcac 7273352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 351 - 436
Target Start/End: Complemental strand, 13743323 - 13743238
Alignment:
Q  351 atggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||| |||||||||||| || ||| |||| || ||||||||  ||||||||||||||||||||||||    
T  13743323 atggaaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcac 13743238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 351 - 436
Target Start/End: Complemental strand, 13748823 - 13748738
Alignment:
Q  351 atggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||| |||||||||||| || ||| |||| || ||||||||  ||||||||||||||||||||||||    
T  13748823 atggaaaatgttacatgaacaccttttattcatacatccaattgtacaccccatgtattagggatattttggtaagttcatctcac 13748738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 7367549 - 7367632
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||| ||||||| | |||||||||||||| |||| ||||||| ||||||||  ||||||||||||||||||||||||    
T  7367549 ggaaaatgttatatgaacatcatttattcatacacctcattgtacatcccatgtattagggatattttggtaagttcatctcac 7367632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 26670109 - 26670026
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||||| |||||| |||| |||| |  ||||||||  ||||||||||||||||||||||||    
T  26670109 ggaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcac 26670026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 3213400 - 3213483
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||| ||||||||||||||||||| | |||| |||| || ||||||||| ||||||||||||| ||||| ||||    
T  3213400 ggaaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcac 3213483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 26466799 - 26466882
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||| |||||||||||||| ||||||||||| ||||  | ||||||||  | ||||||||||||||||||||||    
T  26466799 ggaaaatgttacataaacaccctttattcctacaccccattgtacactccatgtattagggttattttggtaagttcatctcac 26466882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 355 - 436
Target Start/End: Complemental strand, 24204085 - 24204004
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||| ||||||| ||||||| ||| ||||  | ||||||||  ||||||||||||||||||||||||    
T  24204085 aaaatgttacatgaacaccatttattcctacaccctattgtacactccatgtattagggatattttggtaagttcatctcac 24204004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 355 - 436
Target Start/End: Original strand, 30735984 - 30736065
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||  ||||||| ||||||||||| |||| |  ||||||||  ||||||||||||||||||||||||    
T  30735984 aaaatgttacatgaacactttttattcctacaccccattgtacacctcatgtattagtgatattttggtaagttcatctcac 30736065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 21279929 - 21280012
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||||  ||||  |||||  |||||| ||||||||  ||||||||||||| ||||||||||    
T  21279929 ggaaaatgttacatgaacaccctttatttctacattccattgcacatcccatgtattagggatattttggtaaattcatctcac 21280012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 33242403 - 33242486
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||| |||| |||||||||  ||| |||| || ||||||||| || |||||||||| ||||||||||    
T  33242403 ggaaaatgttacatgaacaccatttaatcatacaccttattgtacaccccatgtattaaggacattttggtaaattcatctcac 33242486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 21293777 - 21293694
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||| |||||||||||||||||||   || | |||| || ||||||||| ||||||||||||| ||||| ||||    
T  21293777 ggaaaatgttacataaacaccctttattcatacatttcactgtacaccccatgtattaaggatattttggtaaattcatttcac 21293694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 353 - 398
Target Start/End: Complemental strand, 31109322 - 31109277
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattataca 398  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||    
T  31109322 ggaaaatgttacatgaacaccctttaatcatacatcccattataca 31109277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 348 - 436
Target Start/End: Original strand, 33253908 - 33253996
Alignment:
Q  348 tatatggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||||| |||| ||| |||||| ||| |||| || ||| ||||  || || ||||||| ||||||||||    
T  33253908 tatatggaaaatgttacatgaacaccatttaatcacacaccctattgtacaccccatgcattagggacatattggtaaattcatctcac 33253996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 1e-26; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 351 - 436
Target Start/End: Original strand, 1750412 - 1750497
Alignment:
Q  351 atggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||||||  |||||||| |||||||||||||||    
T  1750412 atggaaaatgttacatgaacaccctttattcctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcac 1750497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 351 - 436
Target Start/End: Original strand, 16096745 - 16096830
Alignment:
Q  351 atggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||| || ||||||||  ||||||||||| |||| |||||||    
T  16096745 atggaaaatgttacatgaacaccctttattcctacaccccattatacaccccatgtattagggatattttggtgagttaatctcac 16096830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 12302353 - 12302270
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||||  ||||||||||| |||| |||||||||||  |||||||| |||||||||||||||    
T  12302353 ggaaaatgttacatgaacaccctttatttctacaccccattgtacaccctatgtattagggatatttttgtaagttcatctcac 12302270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 354 - 436
Target Start/End: Original strand, 19047158 - 19047240
Alignment:
Q  354 gaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||||||| ||||  ||||| |||| |||||||||||  ||||||||||||||||||||||||    
T  19047158 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcac 19047240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 355 - 435
Target Start/End: Complemental strand, 43490499 - 43490419
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctca 435  Q
    ||||||||||||||||||||||||||| |||| |||||| ||||  ||||||||||  |||||||||||||||||||||||    
T  43490499 aaaatgttacatgaacaccctttattcctacatcccattgtacactctatgtattagggatattttggtaagttcatctca 43490419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 343 - 436
Target Start/End: Complemental strand, 43335873 - 43335780
Alignment:
Q  343 tatattatatggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||| |||| ||||||||||| ||||||| | ||||||| |||||| |||| ||||||| ||||||||  ||||||||||||||||||||||||    
T  43335873 tataatataaggaaaatgttatatgaacatcatttattcctacacctcattgtacatcccatgtattagggatattttggtaagttcatctcac 43335780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 353 - 435
Target Start/End: Original strand, 14285676 - 14285758
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctca 435  Q
    ||||||| |||||  ||||||||||| |||||||||| ||| |||| ||||| |||||||||||||||||||| |||||||||    
T  14285676 ggaaaatattacacaaacaccctttaatcatacaccctattgtacaccctatatattaaagatattttggtaaattcatctca 14285758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 4764826 - 4764743
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||| |||||| ||||||| ||||||| ||| |||| || |||||||| | |||||||||||| ||||||||||    
T  4764826 ggaaaatgttacatcaacaccatttattcctacaccctattgtacaccccatgtattataaatattttggtaaattcatctcac 4764743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 16803968 - 16804051
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||||| |||||||||| ||| ||||||| ||| ||||  || |||||| ||| ||||||||||    
T  16803968 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcac 16804051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 16843250 - 16843333
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||||| |||||||||| ||| ||||||| ||| ||||  || |||||| ||| ||||||||||    
T  16843250 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacatcccatgcattagggacattttgataatttcatctcac 16843333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 30838632 - 30838715
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||||  |||| |  ||| |||| || ||||||||  ||||||||||||||||||||||||    
T  30838632 ggaaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcac 30838715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 43114557 - 43114640
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||||| |||||||||| ||| |||| || ||| ||||  || |||||||||| ||||||||||    
T  43114557 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcac 43114640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 436
Target Start/End: Complemental strand, 11825752 - 11825671
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||| |||||||||| ||| |||| || ||| ||||  || |||||||||| ||||||||||    
T  11825752 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcac 11825671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 348 - 392
Target Start/End: Complemental strand, 42849951 - 42849907
Alignment:
Q  348 tatatggaaaatgttacatgaacaccctttattcatacaccccat 392  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  42849951 tatatggaaaatgttacatgaacaccctttattcctacaccccat 42849907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 966934 - 966851
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||||| |||||||||| ||| |||| || ||| |||||  |  ||||||||| ||||||||||    
T  966934 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaagaacgttttggtaaattcatctcac 966851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 18491705 - 18491788
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||||| |||||||||| ||| |||| |  ||| |||||  | |||||||||| ||||||||||    
T  18491705 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacacctcatgcattaagaacattttggtaaattcatctcac 18491788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 436
Target Start/End: Complemental strand, 12415563 - 12415477
Alignment:
Q  350 tatggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||||| |||||||||  ||| |||| || ||| ||||  || |||||||||| || |||||||    
T  12415563 tatggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcac 12415477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 350 - 436
Target Start/End: Complemental strand, 12427623 - 12427537
Alignment:
Q  350 tatggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||||| |||||||||  ||| |||| || ||| ||||  || |||||||||| || |||||||    
T  12427623 tatggaaaatgttacatgaacaccctttaatcatacaccttattgtacaccccatgcattagggacattttggtaattttatctcac 12427537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 355 - 432
Target Start/End: Original strand, 33229303 - 33229381
Alignment:
Q  355 aaaatgttacatgaacacccttt-attcatacaccccattatacatcctatgtattaaagatattttggtaagttcatc 432  Q
    |||||| |||||||||||||||| |||| |||||| |||| |||| || ||||||||  ||||||||||||||||||||    
T  33229303 aaaatgatacatgaacacccttttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatc 33229381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 355 - 436
Target Start/End: Complemental strand, 4299518 - 4299437
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||| |||||||||||||| |||||||||| ||| ||||  | ||| ||||| || |||||||||| ||||||||||    
T  4299518 aaaatgttatatgaacaccctttaatcatacaccctattgtacactccatgcattaatgacattttggtaaattcatctcac 4299437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 355 - 436
Target Start/End: Complemental strand, 41282072 - 41281991
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||| |||||||||| ||| |||| || ||| ||||  || |||||| ||| ||||||||||    
T  41282072 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttgataatttcatctcac 41281991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 393
Target Start/End: Original strand, 7070412 - 7070456
Alignment:
Q  349 atatggaaaatgttacatgaacaccctttattcatacaccccatt 393  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||    
T  7070412 atatgaaaaatgttacatgaacaccctttattcatacatcccatt 7070456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 354 - 436
Target Start/End: Complemental strand, 34817875 - 34817793
Alignment:
Q  354 gaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||||| ||||| |||| |||| || ||| | ||   | |||||||||| ||||||||||    
T  34817875 gaaaatgttacatgaacaccctttattcacacacctcattgtacaccccatgcactacgcacattttggtaaattcatctcac 34817793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 355 - 436
Target Start/End: Complemental strand, 8896681 - 8896600
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||||||| |||  ||||| |||| |||||  | ||   |||||||||||| ||||||||||    
T  8896681 aaaatgttacatgaacaccctttattcacacattccattgtacaccctatacaataggaatattttggtaaattcatctcac 8896600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 395 - 432
Target Start/End: Complemental strand, 39149350 - 39149313
Alignment:
Q  395 tacatcctatgtattaaagatattttggtaagttcatc 432  Q
    |||||||||||||||| |||||||||||||||||||||    
T  39149350 tacatcctatgtattagagatattttggtaagttcatc 39149313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 348 - 380
Target Start/End: Original strand, 42849962 - 42849994
Alignment:
Q  348 tatatggaaaatgttacatgaacaccctttatt 380  Q
    |||||||||||||||||||||||||||||||||    
T  42849962 tatatggaaaatgttacatgaacaccctttatt 42849994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 42026767 - 42026852
Alignment:
Q  353 ggaaaatgttacatgaacaccc--tttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||  ||||||||||||  ||||| |||||||   | ||||  |||||||||| || ||||||||||    
T  42026767 ggaaaatgttacatgaacacccaatttattcatacattccattgtacatcccgcgcattagggatattttggcaaattcatctcac 42026852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 355 - 436
Target Start/End: Complemental strand, 6518566 - 6518486
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||| |||||| |||||||| | ||| |||| || ||| ||||  || |||||||||| ||||||||||    
T  6518566 aaaatgttacatgaaca-cctttaatcatacactctattgtacaccccatgcattagggacattttggtaatttcatctcac 6518486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 436
Target Start/End: Complemental strand, 13780837 - 13780752
Alignment:
Q  351 atggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||| |||||  |||||||| ||||| |||| |||| || ||  ||||  ||||||||| ||| ||||||||||    
T  13780837 atggaaaatgttacatcaacacattttattcacacacctcattgtacaccccatacattagggatattttgataaattcatctcac 13780752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 14288 - 14205
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||  |||||||| |||||||||||||||    
T  14288 ggaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctcac 14205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 24616 - 24533
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||||  |||||||| |||||||||||||||    
T  24616 ggaaaatgttacatgaacaccctttatttctacaccccattgtacatcctatgtattagggatatttttgtaagttcatctcac 24533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 2e-25; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 1771366 - 1771283
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||| || |||||||| |||||||||| ||||||||||||||    
T  1771366 ggaaaatgttacatgaacaccctttattcctacaccccattgtacaccccatgtattagagatattttgataagttcatctcac 1771283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 55966446 - 55966363
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||| ||||||||||||||||||| |||||| ||||||| ||||||||  ||||||||||||||||||||||||    
T  55966446 ggaaaatgttacataaacaccctttattcatacatcccattgtacatcccatgtattagggatattttggtaagttcatctcac 55966363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 349 - 435
Target Start/End: Complemental strand, 27316817 - 27316731
Alignment:
Q  349 atatggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctca 435  Q
    ||||||||||||||| | ||||||||||||||| |||||| ||||||||| || ||||||||| |||||||||||||||||||||||    
T  27316817 atatggaaaatgttaaacgaacaccctttattcctacacctcattatacaccccatgtattaaggatattttggtaagttcatctca 27316731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 352 - 433
Target Start/End: Original strand, 12496955 - 12497036
Alignment:
Q  352 tggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatct 433  Q
    |||||||||||| ||||||||||||||||| ||||| ||||| ||||||| |||||||| ||||||||||||||||||||||    
T  12496955 tggaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatct 12497036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 711960 - 712043
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||||| |||||||||| ||| |||| |||||| ||||| ||||||||||||| ||||||||||    
T  711960 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccctatgcattaaggatattttggtaaattcatctcac 712043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 25051693 - 25051776
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||| |||||||||| |||||||| ||||||||||| |||| |||||||||||  ||||||||||||||||||||||||    
T  25051693 ggaaaatgtcacatgaacacactttattcctacaccccattgtacaccctatgtattagggatattttggtaagttcatctcac 25051776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 353 - 435
Target Start/End: Original strand, 21687006 - 21687088
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctca 435  Q
    ||||||||||||||||||| ||||||||  |||||||||||||||||| ||||||||| | ||||||| ||||||||||||||    
T  21687006 ggaaaatgttacatgaacatcctttatttttacaccccattatacatcttatgtattagaaatattttagtaagttcatctca 21687088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 27864564 - 27864647
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||| |||||| |||||||||||| |||||| |||| || ||||||||  ||||||||||||||||||||||||    
T  27864564 ggaaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaagttcatctcac 27864647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 28982922 - 28982839
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||||  ||||||| ||| ||||||| || |||||  ||||||||||||||||||||||||    
T  28982922 ggaaaatgttacatgaacaccctttatttctacaccctattgtacatcccatatattagggatattttggtaagttcatctcac 28982839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 350 - 436
Target Start/End: Complemental strand, 17619255 - 17619169
Alignment:
Q  350 tatggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||| |||| |||||||||| ||| |||| || ||| ||||| ||||||||||||| ||||||||||    
T  17619255 tatggaaaatgttacatgaacaccttttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcac 17619169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 356 - 436
Target Start/End: Complemental strand, 23204875 - 23204795
Alignment:
Q  356 aaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||| |||||||| |||| |||||| ||||||||||||||||  |||||||| |||||||||| ||||    
T  23204875 aaatgttacatgaacactctttattcctacatcccattgtacatcctatgtattagggatatttttgtaagttcatgtcac 23204795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 48463550 - 48463467
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||| |||||| ||||||||||||   |||| ||||||| ||||||||  ||||||||||||||||||||||||    
T  48463550 ggaaaatgttacataaacaccatttattcatacatttcattgtacatcccatgtattagggatattttggtaagttcatctcac 48463467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 354 - 436
Target Start/End: Original strand, 41878407 - 41878489
Alignment:
Q  354 gaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||| ||||||||||||||| |||| |||| |||||  ||||  ||||||||| ||||||||||||||    
T  41878407 gaaaatgttacatgaacactctttattcatacacctcattgtacaccctatccattagggatattttgataagttcatctcac 41878489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 348 - 433
Target Start/End: Original strand, 27550304 - 27550389
Alignment:
Q  348 tatatggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatct 433  Q
    |||| ||||||||||||||||||||||||||||  ||||| ||||| |||| |  ||||||||  |||||||||||||||||||||    
T  27550304 tatagggaaaatgttacatgaacaccctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatct 27550389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 355 - 436
Target Start/End: Complemental strand, 27893940 - 27893859
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||| |||||| |||||||||||| |||||| |||| || ||||||||  ||||||||||||| ||||||||||    
T  27893940 aaaatgttacataaacaccatttattcatacatcccattgtacaccccatgtattagggatattttggtaatttcatctcac 27893859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 355 - 436
Target Start/End: Original strand, 43735744 - 43735825
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||| ||||||||||| ||||||||| |||| | |||||||||| | |||||||| |||||||||| ||||||||||||||    
T  43735744 aaaatattacatgaacatcctttattcctacatctcattatacattccatgtattagagatattttgataagttcatctcac 43735825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 352 - 436
Target Start/End: Complemental strand, 55272477 - 55272393
Alignment:
Q  352 tggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||| |||||| |||||||| | ||| |||| || ||| ||||| ||||||||||||| ||||||||||    
T  55272477 tggaaaatgttacatgaacatcctttaatcatacactctattgtacaccccatgcattaaggatattttggtaaattcatctcac 55272393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 23035980 - 23036063
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||  ||||||||| ||||||| ||| |||| ||||| |||||  |||||||| |||||||||||||||    
T  23035980 ggaaaatgttacatgaacctcctttattcctacaccctattgtacaccctatatattagggatatttttgtaagttcatctcac 23036063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 33703141 - 33703224
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||||  |||| |  ||| |||| || ||||||||  ||||||||||||||||||||||||    
T  33703141 ggaaaatgttacatgaacaccctttatttctacatcttattgtacaccccatgtattagggatattttggtaagttcatctcac 33703224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 349 - 436
Target Start/End: Original strand, 35017729 - 35017815
Alignment:
Q  349 atatggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||||||||| || | | |||| |||| || ||||| ||  ||||||||||||||||||||||||    
T  35017729 atatggaaaatgttacatgaacaccctttattcctatatctcattgtacaccccatgta-tagggatattttggtaagttcatctcac 35017815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 436
Target Start/End: Complemental strand, 3756344 - 3756263
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||| |||||||||| ||| |||| || ||| ||||| |||||||| |||| || |||||||    
T  3756344 aaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttagtaaatttatctcac 3756263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 355 - 436
Target Start/End: Complemental strand, 43514784 - 43514703
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||| ||||| ||||| ||||    ||||||||  | ||||||||||||||||||||||    
T  43514784 aaaatgttacatgaacaccctttattcctacactccattgtacacttcatgtattagggttattttggtaagttcatctcac 43514703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 32728357 - 32728440
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||| |||||| |||||||||| ||| |||| || ||| ||||| || ||||| |||| ||||||||||    
T  32728357 ggaaaatgttacatgaacatcctttaatcatacaccctattgtacaccccatgcattaaggacattttagtaaattcatctcac 32728440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 353 - 435
Target Start/End: Original strand, 28988473 - 28988555
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctca 435  Q
    |||||||||||||||||||||||||||||||||||| |||| |||| || ||| | ||  || |||||| ||| |||||||||    
T  28988473 ggaaaatgttacatgaacaccctttattcatacacctcattgtacaccccatgcactagggacattttgataaattcatctca 28988555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 355 - 436
Target Start/End: Complemental strand, 43949900 - 43949818
Alignment:
Q  355 aaaatgttacatgaacacccttt-attcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||| |||||||||||||||| |||| | |||| |||| |||| || ||||||||  ||||||||||||||||||||||||    
T  43949900 aaaatgatacatgaacacccttttattcctgcacctcattgtacaccccatgtattagggatattttggtaagttcatctcac 43949818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 355 - 436
Target Start/End: Original strand, 35037007 - 35037088
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||| |||||||||  ||||||| | ||| |||| || ||| ||||| ||||||||||||| ||||||||||    
T  35037007 aaaatgttacatgagcaccctttaaccatacactctattgtacaccccatgcattaaggatattttggtaaattcatctcac 35037088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 433
Target Start/End: Complemental strand, 960970 - 960890
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatct 433  Q
    |||||||||||||||||||||||||| |||||||| | ||| |||| |||||  ||||  || |||||||||| |||||||    
T  960970 ggaaaatgttacatgaacaccctttaatcatacactctattgtacaccctatacattagggacattttggtaaattcatct 960890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 392
Target Start/End: Complemental strand, 36004207 - 36004165
Alignment:
Q  350 tatggaaaatgttacatgaacaccctttattcatacaccccat 392  Q
    |||||||||||||||||||| |||||||| |||||||||||||    
T  36004207 tatggaaaatgttacatgaataccctttaatcatacaccccat 36004165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 355 - 436
Target Start/End: Original strand, 39631102 - 39631184
Alignment:
Q  355 aaaatgttacatgaacacccttt-attcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||| ||||||||| |||||| |||| |||||| |||| |||| |  ||||||||  ||||||||||||||||||||||||    
T  39631102 aaaatgatacatgaacccccttttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcac 39631184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 355 - 436
Target Start/End: Original strand, 31680904 - 31680985
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||| | |||||| ||||||||||||  ||||| |||| ||  | |||||  ||||||||||||||||||||||||    
T  31680904 aaaatgttacgtaaacaccatttattcatacattccattgtacaccccgtatattagggatattttggtaagttcatctcac 31680985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 355 - 436
Target Start/End: Complemental strand, 41327641 - 41327560
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||  |||||||||||||| |||||||||| |||| | |||| | ||  || |||||||||| ||||||||||    
T  41327641 aaaatgttacatagacaccctttattcacacaccccattgtacaccttatgcactacggacattttggtaaattcatctcac 41327560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 46827806 - 46827723
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||||| |||||||| | ||| |||| || ||| |||||  |  ||||||||| || |||||||    
T  46827806 ggaaaatgttacatgaacaccctttaatcatacactctattgtacacccaatgcattaagaacgttttggtaaatttatctcac 46827723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 436
Target Start/End: Complemental strand, 45490415 - 45490330
Alignment:
Q  351 atggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||  |||||| ||||| || ||| |||| |  ||||||||  |||| ||| |||| ||||||||||    
T  45490415 atggaaaatgttacatgaacacattttatttatacatccaattgtacacctcatgtattagggatactttagtaaattcatctcac 45490330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 353 - 433
Target Start/End: Complemental strand, 49229764 - 49229684
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatct 433  Q
    ||||||||||| ||||||| |||||| |||||||||| ||| ||||    ||| ||||| |||||| |||||| |||||||    
T  49229764 ggaaaatgttatatgaacatcctttaatcatacaccctattgtacacttcatgcattaaggatattctggtaaattcatct 49229684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 2e-25; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 5489776 - 5489859
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||||| |||| |||||| |||| |||||||||||  ||||||||||||||||||||||||    
T  5489776 ggaaaatgttacatgaacaccctttattcctacatcccattgtacaccctatgtattagggatattttggtaagttcatctcac 5489859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 352 - 436
Target Start/End: Complemental strand, 43571187 - 43571103
Alignment:
Q  352 tggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||||||||| |||||| |||| |||| || ||||||||  ||||||||||||||||||||||||    
T  43571187 tggaaaatgttacatgaacaccctttattcctacacctcattgtacaccccatgtattagggatattttggtaagttcatctcac 43571103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 351 - 436
Target Start/End: Original strand, 38335916 - 38336001
Alignment:
Q  351 atggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||||||| |||||||||  ||| ||||||| ||| ||||| ||||||||||||| ||||||||||    
T  38335916 atggaaaatgttacatgaacaccctttaatcatacaccttattgtacatcccatgcattaaggatattttggtaaattcatctcac 38336001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 351 - 436
Target Start/End: Original strand, 48119626 - 48119711
Alignment:
Q  351 atggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||||||| |||||||||| ||| |||| || ||| ||||| ||||||||||||| ||||||||||    
T  48119626 atggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattaaggatattttggtaaattcatctcac 48119711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 352 - 436
Target Start/End: Original strand, 35003293 - 35003377
Alignment:
Q  352 tggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||| |||||||||| ||| |||| || ||  ||||| ||||||||||||| ||||||||||    
T  35003293 tggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatacattaaggatattttggtaaattcatctcac 35003377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 37814778 - 37814861
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||| ||||||||||||||||||| | |||| |||| || ||||||||| ||||||||||||| ||||| ||||    
T  37814778 ggaaaatgttacataaacaccctttattcatacatctcattgtacaccccatgtattaaggatattttggtaaattcatttcac 37814861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 355 - 436
Target Start/End: Complemental strand, 2497660 - 2497579
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||| |||||| ||||||||||||  ||||| |||| || || |||||| ||||||||||||||||||||||||    
T  2497660 aaaatgttacataaacaccatttattcatacattccattgtacaccccatatattaaggatattttggtaagttcatctcac 2497579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 355 - 436
Target Start/End: Original strand, 7447828 - 7447908
Alignment:
Q  355 aaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||| ||||||||| |||| |||||| |||| || |||||||| |||||||||| ||||||||||||||    
T  7447828 aaaatgttacatgaacatcctttattcctacatcccattgtaca-cccatgtattacagatattttgataagttcatctcac 7447908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 38113295 - 38113212
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||| |||||||||||||| |||||||||| ||| |||| || ||| ||||| || |||||||||| ||||||||||    
T  38113295 ggaaaatgttatatgaacaccctttaatcatacaccctattgtacaccccatgcattaatgacattttggtaaattcatctcac 38113212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 44112677 - 44112760
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||||| |||||||||| ||| |||| || ||| ||||  || |||||||||| ||||||||||    
T  44112677 ggaaaatgttacatgaacaccctttaatcatacaccctattgtacaccccatgcattagggacattttggtaatttcatctcac 44112760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 345 - 436
Target Start/End: Complemental strand, 45639840 - 45639749
Alignment:
Q  345 tattatatggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||| |||||||||||||||||||| ||||| ||||||| || ||| |||| || ||  ||||| ||||||||||||| ||||||||||    
T  45639840 tattataaggaaaatgttacatgaacactctttaatcatacatcctattgtacaccccatacattaaggatattttggtaaattcatctcac 45639749  T

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Target: chr1; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 46168383 - 46168466
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||||| ||||| | || ||| |||| || ||| ||||| ||||||||||||| ||||||||||    
T  46168383 ggaaaatgttacatgaacaccctttaatcatatatcctattgtacacccaatgcattaaggatattttggtaaattcatctcac 46168466  T

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Target: chr1; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 48499062 - 48498979
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||| |||||||  ||||| ||||| |||| |  ||||||||  ||||||||||||||||||||||||    
T  48499062 ggaaaatgttacatgaacactctttatttctacactccattgtacacctcatgtattagggatattttggtaagttcatctcac 48498979  T

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Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 352 - 433
Target Start/End: Complemental strand, 50448361 - 50448280
Alignment:
Q  352 tggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatct 433  Q
    ||||||||||||||||||||| |||||||  ||||| ||||| |||| | |||||||||  |||||||| ||||||||||||    
T  50448361 tggaaaatgttacatgaacactctttatttctacactccattgtacaccttatgtattagggatatttttgtaagttcatct 50448280  T

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Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 23989624 - 23989540
Alignment:
Q  353 ggaaaatgttacatgaacacccttt-attcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||| |||||||||| | ||| || | |||||||||||  ||||||||||||| || |||||||    
T  23989624 ggaaaatgttacatgaacacccttttattcatacactcaattgtataccctatgtattagggatattttggtaaatttatctcac 23989540  T

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Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 355 - 436
Target Start/End: Original strand, 4401329 - 4401411
Alignment:
Q  355 aaaatgttacatgaacacccttt-attcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||| ||||||||||| |||| |||| |||||  |||| |||| || |||||||| |||||||||||||||||||||||||    
T  4401329 aaaatgatacatgaacactcttttattcctacacttcattgtacaccccatgtattagagatattttggtaagttcatctcac 4401411  T

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Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 353 - 429
Target Start/End: Complemental strand, 24769599 - 24769523
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttc 429  Q
    |||||||||| |||||||||| ||||||  ||||| ||||| |||| || ||||||||  |||||||||||||||||    
T  24769599 ggaaaatgtttcatgaacaccttttatttctacactccattgtacaccccatgtattagggatattttggtaagttc 24769523  T

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Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 41065153 - 41065236
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||||| ||||||||||  || |||| || ||| ||||  |  |||||||||| ||||||||||    
T  41065153 ggaaaatgttacatgaacaccctttaatcatacaccctgttgtacaccccatgcattaggggcattttggtaatttcatctcac 41065236  T

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Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 353 - 435
Target Start/End: Complemental strand, 750405 - 750323
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctca 435  Q
    |||||||||||| |||||||||||  ||| ||||||||||| |||| || |||||| |  ||||||||| ||| |||||||||    
T  750405 ggaaaatgttacgtgaacacccttatttcctacaccccattgtacaccccatgtatcagggatattttgataaattcatctca 750323  T

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Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 353 - 398
Target Start/End: Original strand, 14427347 - 14427392
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattataca 398  Q
    |||||||||||||||||||||||||| |||||||||| ||| ||||    
T  14427347 ggaaaatgttacatgaacaccctttaatcatacaccctattgtaca 14427392  T

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Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 353 - 436
Target Start/End: Complemental strand, 45427845 - 45427762
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||| ||| |||| |||||||||| ||| ||||  | ||| ||||  || |||||||||| ||||||||||    
T  45427845 ggaaaatgttacatgaataccttttaatcatacaccctattgtacactccatgcattagggacattttggtaatttcatctcac 45427762  T

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Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 351 - 392
Target Start/End: Original strand, 4888053 - 4888094
Alignment:
Q  351 atggaaaatgttacatgaacaccctttattcatacaccccat 392  Q
    |||||||||||||||||||| |||||||||| |||| |||||    
T  4888053 atggaaaatgttacatgaacgccctttattcctacatcccat 4888094  T

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Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 387
Target Start/End: Complemental strand, 35000216 - 35000179
Alignment:
Q  350 tatggaaaatgttacatgaacaccctttattcatacac 387  Q
    |||||||||||||||||||||||| |||| ||||||||    
T  35000216 tatggaaaatgttacatgaacaccttttaatcatacac 35000179  T

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Target: scaffold0157 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 352 - 433
Target Start/End: Complemental strand, 23522 - 23441
Alignment:
Q  352 tggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatct 433  Q
    |||||||||||| ||||||||||||||||| ||||| ||||| ||||||| |||||||| ||||||||||||||||||||||    
T  23522 tggaaaatgttatatgaacaccctttattcctacactccattgtacatcccatgtattagagatattttggtaagttcatct 23441  T

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Target: scaffold0038 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 354 - 436
Target Start/End: Original strand, 112656 - 112738
Alignment:
Q  354 gaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    |||||||||||||||||||||||||||| ||||  ||||| |||| |||||||||||  ||||||||||||||||||||||||    
T  112656 gaaaatgttacatgaacaccctttattcctacattccattgtacaccctatgtattagggatattttggtaagttcatctcac 112738  T

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Target: scaffold0385 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 11251 - 11334
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||| |||||||||| |||||||||||||||||||| |||| || || |||||  ||||||||||||||||||||||||    
T  11251 ggaaaatgtcacatgaacacactttattcatacaccccattgtacaccccatatattagggatattttggtaagttcatctcac 11334  T

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Target: scaffold0119 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 353 - 436
Target Start/End: Original strand, 685 - 768
Alignment:
Q  353 ggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||||||||||||||||| |||||| |||| |||| |  ||||||||  ||||||||||||||||||||||||    
T  685 ggaaaatgttacatgaacaccctttattcctacacctcattgtacacctcatgtattagggatattttggtaagttcatctcac 768  T

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Target: scaffold0100 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 352 - 436
Target Start/End: Complemental strand, 35557 - 35473
Alignment:
Q  352 tggaaaatgttacatgaacaccctttattcatacaccccattatacatcctatgtattaaagatattttggtaagttcatctcac 436  Q
    ||||||||||||||| |||||| |||| |||||||||  ||| |||| || ||| ||||  || || ||||||| ||||||||||    
T  35557 tggaaaatgttacataaacaccatttaatcatacaccatattgtacaccccatgcattagggacatattggtaaattcatctcac 35473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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