View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5189_low_14 (Length: 311)
Name: NF5189_low_14
Description: NF5189
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5189_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 18 - 223
Target Start/End: Complemental strand, 47287298 - 47287093
Alignment:
| Q |
18 |
atatctcatgtagtattttatcattcaaatcaatatatatttcattaatttcgtacactaaacaaacccaaatcccaccaacactttactagtaaaatat |
117 |
Q |
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| T |
47287298 |
atatctcatgtagtatttaatcattcaaatcaatatatatttcattaatttcgtacactaaacaaacccaaatcccaccaacactttactagtaaaatat |
47287199 |
T |
|
| Q |
118 |
taatctaactactagctactcaattccaacactctacctccttttctcttctaacccacccaaaatgagctctatcacattaatcttaattttcttcata |
217 |
Q |
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||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
47287198 |
taatccaactactagctactcaattccaacactctacctccttttctcttctaacccacccaaaatgagctctatcacattaatcctaattttcttcata |
47287099 |
T |
|
| Q |
218 |
ctatct |
223 |
Q |
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|||||| |
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| T |
47287098 |
ctatct |
47287093 |
T |
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