View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5190-Insertion-6 (Length: 507)
Name: NF5190-Insertion-6
Description: NF5190
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5190-Insertion-6 |
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Alignment Details
Target: chr6 (Bit Score: 331; Significance: 0; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 331; E-Value: 0
Query Start/End: Original strand, 27 - 481
Target Start/End: Complemental strand, 9524666 - 9524227
Alignment:
| Q |
27 |
attttaatttatccttagtgcctgctctgagtgcaccacttatacatatggttcaaattaaattcaaaggctgctaccacagtcat-acattacactgta |
125 |
Q |
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| T |
9524666 |
attttaattaatccttagtgcctgctctgagtgcaccacttatacatatggttcaaattaaattcaaaggctgctaccacagtcattacattacactgta |
9524567 |
T |
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| Q |
126 |
cattaattgcagttaaattattagttattacataagaaaaagacccaacatgtgtgcagttattttaaatcacagtactatgtgttagtttaatttacat |
225 |
Q |
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| T |
9524566 |
cc---attgcagttaaattatta-------cataagaaaaagacccagtatgggtgcagttattttaaatcacagtaccatgtgttagtttaatttacat |
9524477 |
T |
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| Q |
226 |
acacgtagttttggataattttttcactaaaaattttacccnnnnnnnaatcacataccatgtgttagtttaatgcatgtgagtcagcacaaatcaaact |
325 |
Q |
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| T |
9524476 |
acacgtagttttggataattttttcactaaaatttttacc-tttttttaatcacataccatgtgttagtttaatgcatgtgagtcagcacaaatcaaact |
9524378 |
T |
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| Q |
326 |
caagatattgtcttcaatcaataaataaaataatatagacatagattctcattaaattcagttcctgcagaattattaacttctttattgtcctattata |
425 |
Q |
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| T |
9524377 |
caagatattgtcttcaatcaataaataaaataatatagacatagattctcattaaattcagttcctgcagaattattaacttctttattgtccta----- |
9524283 |
T |
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| Q |
426 |
ttatctgatccaaatttttgttttctttatatgttcatgttgtctttgtccaattg |
481 |
Q |
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| T |
9524282 |
ttatctgatccaaatttttgttttctttatatgttcatgttgtctttgtccaattg |
9524227 |
T |
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