View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5190_high_36 (Length: 281)
Name: NF5190_high_36
Description: NF5190
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5190_high_36 |
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Alignment Details
Target: chr6 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 1 - 261
Target Start/End: Original strand, 2561481 - 2561741
Alignment:
| Q |
1 |
cacattaatgttgaggtggacgaaggttcacgtggtaaatggcagttaacgggttattatggcttccccgatgggaggaggagaagagattcttgaaatt |
100 |
Q |
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| T |
2561481 |
cacattaatgttgaggtggacgaaggttcacgtggtaaatggcagttaacgggttattatggcttccccgatgggaggaggagaagagattcttggaatt |
2561580 |
T |
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| Q |
101 |
tcatttatcaattagcaaatagtacttctctcccatggtgcatttttggagattttaacgatatccttcatgcacatgaaaagaaggggagaacagtccg |
200 |
Q |
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||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2561581 |
tcattcgtcaattagcaaatagtacttctctgccatggtgcatttttggagattttaacgatatccttcatgcacatgaaaagaaggggagaacagtccg |
2561680 |
T |
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| Q |
201 |
tccattctggttgataaatggctaaagatgagctattcataatgcaggtttgattgatatt |
261 |
Q |
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||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |
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| T |
2561681 |
tccatcctggttgataaatggctaaagaagagctattcatgatgcaggtttgattgatatt |
2561741 |
T |
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