View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5192-Insertion-4 (Length: 624)

Name: NF5192-Insertion-4
Description: NF5192
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5192-Insertion-4
NF5192-Insertion-4
[»] chr4 (66 HSPs)
chr4 (46-326)||(38957469-38957750)
chr4 (537-624)||(38957265-38957349)
chr4 (264-325)||(32648929-32648990)
chr4 (268-325)||(38366126-38366183)
chr4 (262-325)||(904290-904353)
chr4 (247-325)||(21730252-21730330)
chr4 (264-325)||(7182116-7182177)
chr4 (264-325)||(17873291-17873352)
chr4 (264-325)||(24291480-24291541)
chr4 (264-325)||(37756648-37756709)
chr4 (264-325)||(38317153-38317214)
chr4 (264-325)||(47669905-47669966)
chr4 (264-325)||(48830739-48830800)
chr4 (264-325)||(52594551-52594612)
chr4 (253-325)||(41844519-41844591)
chr4 (266-325)||(36886822-36886881)
chr4 (266-325)||(46176862-46176921)
chr4 (264-322)||(41363740-41363798)
chr4 (264-326)||(46176606-46176668)
chr4 (264-325)||(3126937-3126998)
chr4 (264-325)||(16535786-16535847)
chr4 (284-325)||(23708251-23708292)
chr4 (264-325)||(31530114-31530175)
chr4 (264-325)||(32060741-32060802)
chr4 (427-468)||(38957343-38957384)
chr4 (264-325)||(49404548-49404609)
chr4 (264-325)||(49936597-49936658)
chr4 (264-325)||(51431039-51431100)
chr4 (265-325)||(35959277-35959337)
chr4 (264-325)||(368152-368213)
chr4 (264-321)||(8827749-8827806)
chr4 (264-325)||(8828135-8828196)
chr4 (292-325)||(13270106-13270139)
chr4 (264-325)||(20534022-20534083)
chr4 (284-325)||(24280026-24280067)
chr4 (264-325)||(36151295-36151356)
chr4 (264-325)||(40422998-40423059)
chr4 (264-325)||(46669870-46669931)
chr4 (264-324)||(27143273-27143333)
chr4 (264-316)||(43167026-43167078)
chr4 (262-321)||(6836493-6836552)
chr4 (266-325)||(24662672-24662731)
chr4 (266-325)||(53013684-53013743)
chr4 (284-322)||(22558892-22558930)
chr4 (267-325)||(37662741-37662799)
chr4 (264-326)||(43104173-43104235)
chr4 (278-320)||(52636869-52636911)
chr4 (287-325)||(53300032-53300070)
chr4 (284-325)||(4441948-4441989)
chr4 (264-325)||(12708759-12708820)
chr4 (284-321)||(16878814-16878851)
chr4 (267-316)||(22891217-22891266)
chr4 (267-316)||(22942881-22942930)
chr4 (264-325)||(28175389-28175450)
chr4 (264-325)||(28880086-28880147)
chr4 (264-325)||(29114168-29114229)
chr4 (264-325)||(30198696-30198757)
chr4 (264-325)||(38136759-38136820)
chr4 (266-319)||(39421912-39421965)
chr4 (268-325)||(50494579-50494636)
chr4 (266-322)||(17115065-17115120)
chr4 (264-304)||(18369792-18369832)
chr4 (264-304)||(36593091-36593131)
chr4 (264-316)||(43929739-43929791)
chr4 (264-304)||(52430521-52430561)
chr4 (264-319)||(54806565-54806621)
[»] chr1 (63 HSPs)
chr1 (264-323)||(50402836-50402895)
chr1 (262-325)||(50247689-50247752)
chr1 (268-325)||(1688142-1688199)
chr1 (264-325)||(11017696-11017757)
chr1 (264-325)||(23871388-23871449)
chr1 (264-325)||(33991636-33991697)
chr1 (264-325)||(42161978-42162039)
chr1 (266-325)||(23079871-23079930)
chr1 (264-322)||(1523690-1523748)
chr1 (264-325)||(2175429-2175490)
chr1 (264-325)||(5883529-5883589)
chr1 (264-325)||(12293907-12293968)
chr1 (264-325)||(13061322-13061383)
chr1 (264-325)||(13255439-13255500)
chr1 (264-325)||(14153206-14153267)
chr1 (284-325)||(15463926-15463967)
chr1 (264-321)||(27500079-27500136)
chr1 (284-325)||(30543288-30543329)
chr1 (264-325)||(32299197-32299258)
chr1 (264-325)||(32300150-32300211)
chr1 (264-325)||(33854764-33854825)
chr1 (264-325)||(33926097-33926158)
chr1 (264-325)||(39889583-39889644)
chr1 (264-325)||(42488552-42488613)
chr1 (264-325)||(43530223-43530284)
chr1 (264-325)||(45565225-45565286)
chr1 (264-325)||(47905614-47905675)
chr1 (264-320)||(36668579-36668635)
chr1 (266-325)||(17675293-17675352)
chr1 (267-322)||(26757083-26757138)
chr1 (287-322)||(28748308-28748343)
chr1 (266-325)||(41432687-41432746)
chr1 (284-322)||(1071087-1071125)
chr1 (267-325)||(9173674-9173732)
chr1 (264-318)||(36385434-36385488)
chr1 (264-325)||(2925860-2925921)
chr1 (264-325)||(5970366-5970427)
chr1 (264-325)||(24436857-24436918)
chr1 (264-325)||(38857938-38857999)
chr1 (264-325)||(42806265-42806326)
chr1 (264-325)||(47206349-47206410)
chr1 (264-325)||(51246499-51246560)
chr1 (264-324)||(43036249-43036309)
chr1 (284-323)||(1278584-1278623)
chr1 (264-326)||(9595658-9595718)
chr1 (266-325)||(26345722-26345781)
chr1 (266-325)||(28848724-28848783)
chr1 (286-325)||(51303100-51303139)
chr1 (264-322)||(896423-896481)
chr1 (286-320)||(1063453-1063487)
chr1 (267-325)||(33579351-33579409)
chr1 (264-322)||(34918670-34918728)
chr1 (284-325)||(4204705-4204746)
chr1 (264-325)||(17760410-17760471)
chr1 (264-325)||(28718738-28718799)
chr1 (264-325)||(34154263-34154324)
chr1 (284-325)||(34738430-34738471)
chr1 (264-325)||(37649541-37649602)
chr1 (264-325)||(39886849-39886910)
chr1 (264-325)||(41817224-41817285)
chr1 (293-325)||(26940703-26940735)
chr1 (268-316)||(40707138-40707186)
chr1 (264-320)||(50476623-50476679)
[»] scaffold0717 (1 HSPs)
scaffold0717 (264-325)||(1673-1734)
[»] chr7 (50 HSPs)
chr7 (264-325)||(38235889-38235950)
chr7 (264-325)||(5967978-5968039)
chr7 (264-325)||(41002176-41002237)
chr7 (264-325)||(42620277-42620338)
chr7 (264-325)||(43665094-43665155)
chr7 (266-326)||(20513405-20513465)
chr7 (264-324)||(33113565-33113625)
chr7 (287-325)||(23620719-23620757)
chr7 (267-325)||(38233661-38233719)
chr7 (264-326)||(44720176-44720238)
chr7 (267-325)||(47275927-47275985)
chr7 (264-325)||(4787928-4787989)
chr7 (264-325)||(28437467-28437528)
chr7 (264-325)||(33406557-33406618)
chr7 (264-325)||(33810137-33810198)
chr7 (284-325)||(34651978-34652019)
chr7 (264-325)||(42112884-42112945)
chr7 (284-325)||(42220155-42220196)
chr7 (264-325)||(43188952-43189013)
chr7 (265-325)||(22556629-22556689)
chr7 (273-325)||(46611808-46611860)
chr7 (278-325)||(23551479-23551526)
chr7 (264-323)||(43778502-43778561)
chr7 (291-325)||(7667090-7667124)
chr7 (264-325)||(36747390-36747452)
chr7 (264-325)||(36845366-36845427)
chr7 (264-325)||(38138026-38138087)
chr7 (264-325)||(41471533-41471594)
chr7 (266-325)||(23465925-23465984)
chr7 (284-322)||(25335422-25335461)
chr7 (266-325)||(45510439-45510498)
chr7 (284-326)||(7181396-7181438)
chr7 (264-326)||(13858417-13858479)
chr7 (264-318)||(33187779-33187833)
chr7 (264-322)||(42622446-42622504)
chr7 (267-325)||(46449270-46449328)
chr7 (264-326)||(48049540-48049602)
chr7 (264-325)||(4058071-4058132)
chr7 (264-325)||(13044242-13044303)
chr7 (284-325)||(16568613-16568654)
chr7 (284-325)||(16597008-16597049)
chr7 (264-325)||(16805492-16805553)
chr7 (264-325)||(23329301-23329362)
chr7 (284-325)||(24923319-24923360)
chr7 (284-325)||(31055467-31055508)
chr7 (264-325)||(32650316-32650377)
chr7 (264-325)||(38505269-38505330)
chr7 (264-325)||(42266932-42266993)
chr7 (264-325)||(44487260-44487321)
chr7 (267-325)||(48935068-48935128)
[»] chr5 (42 HSPs)
chr5 (264-325)||(33718276-33718337)
chr5 (264-325)||(6044628-6044689)
chr5 (264-324)||(13293910-13293970)
chr5 (266-325)||(19389753-19389812)
chr5 (267-325)||(32760854-32760912)
chr5 (267-325)||(35868928-35868986)
chr5 (267-325)||(38302283-38302341)
chr5 (284-325)||(4648912-4648953)
chr5 (264-325)||(6491279-6491340)
chr5 (264-325)||(17092992-17093053)
chr5 (264-325)||(25027017-25027078)
chr5 (268-325)||(25598694-25598751)
chr5 (264-325)||(27480097-27480158)
chr5 (264-325)||(35701498-35701559)
chr5 (264-325)||(41695072-41695133)
chr5 (267-325)||(1658275-1658333)
chr5 (264-325)||(2021075-2021136)
chr5 (264-326)||(10295578-10295642)
chr5 (264-325)||(26018836-26018897)
chr5 (264-325)||(26149698-26149759)
chr5 (264-325)||(35704707-35704768)
chr5 (264-326)||(5696506-5696566)
chr5 (266-317)||(6816320-6816371)
chr5 (266-325)||(9684716-9684775)
chr5 (278-325)||(13450578-13450625)
chr5 (266-325)||(39011929-39011987)
chr5 (264-318)||(1935039-1935093)
chr5 (264-326)||(2163996-2164058)
chr5 (264-318)||(4841641-4841695)
chr5 (264-318)||(12063918-12063972)
chr5 (284-326)||(12150688-12150730)
chr5 (267-317)||(29799735-29799785)
chr5 (264-325)||(2679811-2679872)
chr5 (264-325)||(15399910-15399971)
chr5 (264-325)||(28154785-28154846)
chr5 (264-325)||(35704971-35705032)
chr5 (264-317)||(37508324-37508376)
chr5 (264-325)||(41923253-41923314)
chr5 (264-324)||(25779590-25779650)
chr5 (265-325)||(32824744-32824804)
chr5 (526-570)||(35266266-35266310)
chr5 (284-320)||(38120124-38120160)
[»] chr3 (55 HSPs)
chr3 (264-325)||(38593047-38593108)
chr3 (262-325)||(30131811-30131874)
chr3 (264-325)||(2420754-2420815)
chr3 (264-325)||(23163618-23163679)
chr3 (264-325)||(29623331-29623392)
chr3 (264-325)||(41961902-41961963)
chr3 (264-325)||(43007447-43007508)
chr3 (264-325)||(49860931-49860992)
chr3 (265-325)||(42583224-42583284)
chr3 (284-325)||(3043053-3043094)
chr3 (264-325)||(7661131-7661192)
chr3 (264-325)||(17642684-17642745)
chr3 (264-325)||(18257633-18257694)
chr3 (264-325)||(25428763-25428824)
chr3 (284-325)||(30121447-30121488)
chr3 (264-325)||(36796519-36796580)
chr3 (264-325)||(38526248-38526309)
chr3 (264-325)||(43237385-43237446)
chr3 (264-325)||(44412080-44412141)
chr3 (264-325)||(46017300-46017361)
chr3 (268-325)||(46312345-46312402)
chr3 (264-325)||(46891481-46891542)
chr3 (284-325)||(47434219-47434260)
chr3 (264-325)||(47714598-47714659)
chr3 (264-325)||(47789371-47789432)
chr3 (264-325)||(55439679-55439740)
chr3 (284-325)||(55445022-55445063)
chr3 (266-325)||(4247214-4247273)
chr3 (266-325)||(13638523-13638582)
chr3 (266-325)||(15499224-15499283)
chr3 (266-325)||(32858927-32858986)
chr3 (268-326)||(105097-105155)
chr3 (264-322)||(39499293-39499351)
chr3 (284-325)||(30697486-30697527)
chr3 (284-325)||(38515352-38515393)
chr3 (284-325)||(49682926-49682967)
chr3 (285-325)||(7302200-7302240)
chr3 (265-325)||(27681899-27681959)
chr3 (265-325)||(54748408-54748467)
chr3 (264-318)||(2927939-2927993)
chr3 (264-326)||(9241574-9241636)
chr3 (264-318)||(19148262-19148316)
chr3 (284-326)||(32721006-32721048)
chr3 (267-325)||(42134615-42134673)
chr3 (264-326)||(44979492-44979554)
chr3 (268-325)||(3537305-3537362)
chr3 (284-321)||(31178176-31178213)
chr3 (284-325)||(31651370-31651411)
chr3 (264-325)||(33982664-33982725)
chr3 (264-325)||(38639674-38639735)
chr3 (264-325)||(48444600-48444661)
chr3 (264-325)||(50535032-50535093)
chr3 (264-321)||(52620764-52620821)
chr3 (284-324)||(34729263-34729303)
chr3 (262-326)||(54917852-54917916)
[»] scaffold1562 (1 HSPs)
scaffold1562 (240-325)||(210-296)
[»] scaffold1158 (1 HSPs)
scaffold1158 (240-325)||(2297-2383)
[»] chr2 (50 HSPs)
chr2 (267-325)||(726046-726104)
chr2 (264-325)||(4042059-4042120)
chr2 (264-325)||(13765864-13765925)
chr2 (264-325)||(32243570-32243631)
chr2 (264-325)||(36567203-36567264)
chr2 (264-325)||(38293983-38294044)
chr2 (264-325)||(40357552-40357613)
chr2 (264-325)||(44020434-44020495)
chr2 (266-326)||(42644742-42644802)
chr2 (262-325)||(18018523-18018586)
chr2 (267-325)||(32950974-32951032)
chr2 (262-316)||(36574382-36574436)
chr2 (264-325)||(3038872-3038933)
chr2 (284-325)||(7184236-7184277)
chr2 (264-325)||(8410855-8410916)
chr2 (264-325)||(8555701-8555762)
chr2 (264-325)||(8990888-8990949)
chr2 (264-325)||(14008254-14008315)
chr2 (264-325)||(16625729-16625790)
chr2 (264-325)||(18826151-18826212)
chr2 (264-325)||(38023372-38023433)
chr2 (284-323)||(5972323-5972362)
chr2 (264-323)||(16519016-16519075)
chr2 (266-325)||(25955759-25955818)
chr2 (286-325)||(26599180-26599219)
chr2 (264-325)||(19382972-19383034)
chr2 (291-325)||(30312352-30312386)
chr2 (284-322)||(30523392-30523430)
chr2 (284-325)||(10165528-10165569)
chr2 (264-325)||(13767513-13767573)
chr2 (264-325)||(18780479-18780540)
chr2 (264-309)||(26434447-26434492)
chr2 (264-325)||(29880859-29880920)
chr2 (284-325)||(31550187-31550228)
chr2 (264-325)||(31899281-31899342)
chr2 (284-325)||(36030908-36030949)
chr2 (289-325)||(1726020-1726056)
chr2 (262-325)||(4666228-4666291)
chr2 (270-325)||(7310143-7310198)
chr2 (270-325)||(26427633-26427688)
chr2 (266-325)||(30265284-30265343)
chr2 (266-325)||(38325201-38325260)
chr2 (264-314)||(3119788-3119838)
chr2 (264-325)||(1270628-1270689)
chr2 (284-325)||(3022810-3022851)
chr2 (264-325)||(6584744-6584805)
chr2 (264-325)||(21626220-21626281)
chr2 (264-325)||(37194362-37194423)
chr2 (284-325)||(41503269-41503310)
chr2 (264-325)||(43572469-43572530)
[»] scaffold0952 (1 HSPs)
scaffold0952 (264-325)||(3595-3656)
[»] scaffold0636 (1 HSPs)
scaffold0636 (264-325)||(8486-8547)
[»] scaffold0028 (1 HSPs)
scaffold0028 (264-325)||(35380-35441)
[»] chr8 (43 HSPs)
chr8 (264-325)||(3404499-3404560)
chr8 (264-325)||(33230972-33231033)
chr8 (264-325)||(34349810-34349871)
chr8 (264-325)||(36102815-36102876)
chr8 (267-325)||(37659456-37659514)
chr8 (284-325)||(4734421-4734462)
chr8 (264-325)||(7079919-7079980)
chr8 (264-325)||(11876939-11877000)
chr8 (264-325)||(11891946-11892007)
chr8 (264-325)||(25033475-25033536)
chr8 (264-325)||(29612086-29612147)
chr8 (265-326)||(33896515-33896576)
chr8 (264-325)||(34272610-34272671)
chr8 (264-325)||(39194026-39194087)
chr8 (264-320)||(4137801-4137857)
chr8 (284-324)||(36906302-36906342)
chr8 (264-326)||(31149997-31150059)
chr8 (284-325)||(7300-7341)
chr8 (264-325)||(2474692-2474753)
chr8 (264-325)||(13865017-13865078)
chr8 (264-325)||(27085443-27085504)
chr8 (266-325)||(11961446-11961505)
chr8 (264-311)||(41455354-41455401)
chr8 (264-325)||(1941975-1942039)
chr8 (266-324)||(3394058-3394116)
chr8 (271-325)||(13258588-13258642)
chr8 (267-325)||(13537440-13537498)
chr8 (267-325)||(13626988-13627046)
chr8 (267-325)||(31297273-31297331)
chr8 (267-325)||(34148505-34148562)
chr8 (284-322)||(35353942-35353980)
chr8 (264-325)||(1839745-1839806)
chr8 (292-325)||(6839723-6839756)
chr8 (264-325)||(8236043-8236104)
chr8 (264-305)||(9054456-9054497)
chr8 (284-325)||(10605082-10605123)
chr8 (264-325)||(15108189-15108250)
chr8 (264-305)||(26042287-26042328)
chr8 (264-325)||(29584269-29584330)
chr8 (264-325)||(36837423-36837484)
chr8 (284-325)||(40984999-40985040)
chr8 (265-325)||(1840132-1840192)
chr8 (264-304)||(10878728-10878768)
[»] chr6 (24 HSPs)
chr6 (264-325)||(5825427-5825488)
chr6 (264-325)||(24734975-24735036)
chr6 (264-325)||(26481056-26481117)
chr6 (264-325)||(26574320-26574381)
chr6 (264-325)||(34914722-34914783)
chr6 (267-325)||(29241758-29241816)
chr6 (264-325)||(1029388-1029449)
chr6 (264-325)||(23095053-23095114)
chr6 (264-322)||(4465021-4465079)
chr6 (264-322)||(6026266-6026324)
chr6 (264-322)||(26713948-26714006)
chr6 (264-318)||(33212415-33212469)
chr6 (267-325)||(34557098-34557155)
chr6 (264-325)||(33677118-33677179)
chr6 (264-324)||(2502292-2502352)
chr6 (267-325)||(8439320-8439378)
chr6 (264-326)||(26289646-26289708)
chr6 (267-325)||(33590254-33590312)
chr6 (266-324)||(33939049-33939107)
chr6 (264-325)||(6687873-6687934)
chr6 (264-325)||(12779608-12779669)
chr6 (264-325)||(32549729-32549790)
chr6 (264-325)||(32719224-32719285)
chr6 (264-324)||(19477351-19477411)
[»] scaffold0927 (1 HSPs)
scaffold0927 (264-324)||(2836-2896)
[»] scaffold0128 (1 HSPs)
scaffold0128 (264-325)||(26475-26536)
[»] scaffold0245 (1 HSPs)
scaffold0245 (284-323)||(4261-4300)
[»] scaffold0229 (1 HSPs)
scaffold0229 (284-323)||(4592-4631)
[»] scaffold0007 (1 HSPs)
scaffold0007 (287-325)||(68625-68663)
[»] scaffold0002 (1 HSPs)
scaffold0002 (264-322)||(90813-90871)
[»] scaffold0648 (1 HSPs)
scaffold0648 (264-321)||(7369-7426)
[»] scaffold0248 (1 HSPs)
scaffold0248 (264-325)||(121-182)
[»] scaffold0119 (2 HSPs)
scaffold0119 (264-325)||(30548-30609)
scaffold0119 (264-325)||(37216-37277)


Alignment Details
Target: chr4 (Bit Score: 242; Significance: 1e-134; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 46 - 326
Target Start/End: Complemental strand, 38957750 - 38957469
Alignment:
Q  46 gtgttgttagcactactctatgtttcggagtttgaacggaggagaagggatgtcttctaaaagaaggaaagaaagtggaaattagagttttgaaaggaga 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |    
T  38957750 gtgttgttagcactactctatgtttcggagtttgaacggaggagaagggatgtcttctaaaagaatgaaagaaagtggaaattagagttttgaaaggaaa 38957651  T
Q  146 ttttttcaaggggtttagttttattcgtaatataaaatcgttataatttggataactaaatatttgtattggaggaggagaccaaatggtttgaataaat 245  Q
     |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  38957650 attttttcaggggtttagttttattcgtaatataaaatcgttataatttggataactaaatatttgtattggaggaggagaccaaagggtttggataaat 38957551  T
Q  246 tttt-aagtccagtctgtcttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctctac 326  Q
    |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38957550 ttttcaagtccagtctatcttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctctac 38957469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 537 - 624
Target Start/End: Complemental strand, 38957349 - 38957265
Alignment:
Q  537 tctaccacgcttcaaacgcatttgagactcatttacgatgttagaatgacacacaagaatagaacaagaccctcttccatctatagtt 624  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||   |||||||||||||||    
T  38957349 tctaccacgcttcaaacgcatttgagactcatttacgatattagaatgacacacaagaatagaacaagac---cttccatctatagtt 38957265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 32648990 - 32648929
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  ||||||||||||||||||||||||||||||||||||||||||    
T  32648990 ttgttataatattcttaaaattaaaaatatattaatcataagtattagtttatcattctcta 32648929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 268 - 325
Target Start/End: Original strand, 38366126 - 38366183
Alignment:
Q  268 tataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  38366126 tataatatttttaaaattaaaaatatattaatcataagtattagtttatcattctcta 38366183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 262 - 325
Target Start/End: Original strand, 904290 - 904353
Alignment:
Q  262 tcttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||| ||||||| ||||||  |||||| |||||||||||||||||||||||||||||||||||    
T  904290 tcttgctataatatttttaaaattaaaagtatattaatcataagtattagtttatcattctcta 904353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 247 - 325
Target Start/End: Complemental strand, 21730330 - 21730252
Alignment:
Q  247 tttaagtccagtctgtcttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||| |||| ||| | ||||||||||| | || |  ||||||||||||||||||||||||||||||||||||||||||    
T  21730330 tttaaatccaatctatgttgttataatattcttgaaattaaaaatatattaatcataagtattagtttatcattctcta 21730252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 7182177 - 7182116
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  7182177 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 7182116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 17873291 - 17873352
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  17873291 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 17873352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 24291480 - 24291541
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  24291480 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 24291541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 37756709 - 37756648
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  37756709 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 37756648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 38317214 - 38317153
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  38317214 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 38317153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 47669905 - 47669966
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  47669905 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 47669966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 48830800 - 48830739
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  48830800 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 48830739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 52594612 - 52594551
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  52594612 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 52594551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 253 - 325
Target Start/End: Original strand, 41844519 - 41844591
Alignment:
Q  253 tccagtctgtcttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||| ||| ||||||||||||| | ||||  |||||| |||||||||||||||||||| ||||||||||||||    
T  41844519 tccaatctatcttgttataatattcttaaaattaaaagtatattaatcataagtattaatttatcattctcta 41844591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 266 - 325
Target Start/End: Original strand, 36886822 - 36886881
Alignment:
Q  266 gttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||||||||||| |||||||||| ||||||||||||||||  ||||||||| ||||    
T  36886822 gttataatacttttaaagttaaaaatacattaatcataagtatttatttatcattttcta 36886881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 266 - 325
Target Start/End: Complemental strand, 46176921 - 46176862
Alignment:
Q  266 gttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||| ||||||| |||||||||||| ||||||||  |||||||||||||||||||    
T  46176921 gttataatatttttaatattaaaaatatatgaatcataaccattagtttatcattctcta 46176862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 41363798 - 41363740
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattct 322  Q
    ||||||||||| | ||||  |||||| ||||||||||||||||||||||||||||||||    
T  41363798 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattct 41363740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 264 - 326
Target Start/End: Original strand, 46176606 - 46176668
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctctac 326  Q
    ||||||||||||||| || |||||||||| |||||||||||||| |  |||||||||||||||    
T  46176606 ttgttataatactttcaaagttaaaaatacattaatcataagtacttatttatcattctctac 46176668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 3126998 - 3126937
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||| ||||    
T  3126998 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattatcta 3126937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 16535786 - 16535847
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  ||||||| |||||||| |||||||||||||||||||||||||    
T  16535786 ttgttataatattcttaaaattaaaaagatattaattataagtattagtttatcattctcta 16535847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 284 - 325
Target Start/End: Original strand, 23708251 - 23708292
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  23708251 ttaaaagtatattaatcataagtattagtttatcattctcta 23708292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 31530114 - 31530175
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||| ||||||||||||||    
T  31530114 ttgttataatattcttaaaattaaaagtatattaatcataagtattaatttatcattctcta 31530175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 32060741 - 32060802
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||| ||||||||||||||    
T  32060741 ttgttataatattcttaaaattaaaagtatattaatcataagtattaatttatcattctcta 32060802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 427 - 468
Target Start/End: Complemental strand, 38957384 - 38957343
Alignment:
Q  427 ctccacttgtaccaaaaaatagaaatagtataatatttacca 468  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  38957384 ctccacttgtaccaaaaaatagaaatagtataatatctacca 38957343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 49404609 - 49404548
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| ||||||||||||||||| |||||||||||||||||    
T  49404609 ttgttataatattcttaaaattaaaagtatattaatcataagtaatagtttatcattctcta 49404548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 49936597 - 49936658
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||||||||||||||||||| |||| ||||||||||||||    
T  49936597 ttgttataatattcttaaaattaaaaatatattaatcataagcattaatttatcattctcta 49936658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 51431039 - 51431100
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  ||||||||||||||||||||| ||||| ||||||||||||||    
T  51431039 ttgttataatattcttaaaattaaaaatatattaatcataaatattactttatcattctcta 51431100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 325
Target Start/End: Original strand, 35959277 - 35959337
Alignment:
Q  265 tgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||||| | ||||| |||||||||||| ||||||||| |||| ||||||||||||||    
T  35959277 tgttataatattcttaatattaaaaatatatgaatcataagcattactttatcattctcta 35959337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 368152 - 368213
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  ||||||||||| |||||||| | |||| ||||||||||||||    
T  368152 ttgttataatatttttaaaattaaaaatatagtaatcatatgcattaatttatcattctcta 368213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 8827806 - 8827749
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattc 321  Q
    ||||||||||| | ||||| |||||||||||| ||||||||  |||||||||||||||    
T  8827806 ttgttataatattcttaatattaaaaatatatgaatcataaacattagtttatcattc 8827749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 8828196 - 8828135
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  | |||||||||||||||||||  |||| ||||||||||||||    
T  8828196 ttgttataatatttttaaattaaaaaatatattaatcataaacattaatttatcattctcta 8828135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 292 - 325
Target Start/End: Original strand, 13270106 - 13270139
Alignment:
Q  292 atattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||||||||||||||||||||||||||    
T  13270106 atattaatcataagtattagtttatcattctcta 13270139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 20534022 - 20534083
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | || |  |||||| ||| |||||||||||||||||||||||||||||||    
T  20534022 ttgttataatattctttaaattaaaagtatgttaatcataagtattagtttatcattctcta 20534083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 284 - 325
Target Start/End: Original strand, 24280026 - 24280067
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||| ||||||||||||||| |||||||||||||||||||    
T  24280026 ttaaaagtatattaatcataagaattagtttatcattctcta 24280067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 36151356 - 36151295
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||  |||||||||||||||||||||||||||||| ||||    
T  36151356 ttgttataatattcttaaaattaaatgtatattaatcataagtattagtttatcattttcta 36151295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 40423059 - 40422998
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  ||||||||||||||||||||| ||||| ||||||| ||||||    
T  40423059 ttgttataatattcttaaaattaaaaatatattaatcataaatattaatttatcactctcta 40422998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 46669931 - 46669870
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||||||||||||||||||| || | ||||||||||||||    
T  46669931 ttgttataatattcttaaaattaaaaatatattaatcataagcataaatttatcattctcta 46669870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 264 - 324
Target Start/End: Original strand, 27143273 - 27143333
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctct 324  Q
    ||||||||||| | ||||  |||||||||||||||||||||| |||| ||||||| |||||    
T  27143273 ttgttataatattcttaaaattaaaaatatattaatcataagcattaatttatcactctct 27143333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 43167078 - 43167026
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttat 316  Q
    ||||||||||| ||||||  ||||||||||||| |||||||| ||||||||||    
T  43167078 ttgttataatatttttaaaattaaaaatatattgatcataagcattagtttat 43167026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 321
Target Start/End: Original strand, 6836493 - 6836552
Alignment:
Q  262 tcttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattc 321  Q
    ||||||||||| | | ||||  |||||||||||||||||||||| |||| ||||||||||    
T  6836493 tcttgttataaaattcttaaaattaaaaatatattaatcataagcattaatttatcattc 6836552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 325
Target Start/End: Complemental strand, 24662731 - 24662672
Alignment:
Q  266 gttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||| ||||||  ||||||| |||||||||||||| |||  ||||||||||||||    
T  24662731 gttataatatttttaaaattaaaaaaatattaatcataagcattgatttatcattctcta 24662672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 325
Target Start/End: Original strand, 53013684 - 53013743
Alignment:
Q  266 gttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||| | ||||  |||||||||||||||||||||  |||| ||||||||||||||    
T  53013684 gttataatattgttaaaattaaaaatatattaatcataaacattaatttatcattctcta 53013743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 284 - 322
Target Start/End: Original strand, 22558892 - 22558930
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattct 322  Q
    |||||| ||||||||||||||||||||||||||| ||||    
T  22558892 ttaaaagtatattaatcataagtattagtttatcgttct 22558930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 267 - 325
Target Start/End: Original strand, 37662741 - 37662799
Alignment:
Q  267 ttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||| ||||||  ||||||||||||||| |||||| |||| ||||||| ||||||    
T  37662741 ttataatatttttaaaattaaaaatatattaaacataagcattattttatcactctcta 37662799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 326
Target Start/End: Complemental strand, 43104235 - 43104173
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctctac 326  Q
    ||||||||||||| ||||   ||||||||||||||| | |||| ||| |||||||||||||||    
T  43104235 ttgttataatactcttaaaactaaaaatatattaattacaagttttaatttatcattctctac 43104173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 278 - 320
Target Start/End: Original strand, 52636869 - 52636911
Alignment:
Q  278 ttaatgttaaaaatatattaatcataagtattagtttatcatt 320  Q
    ||||| |||||||||||| |||||||| |||||||||||||||    
T  52636869 ttaatattaaaaatatatgaatcataaatattagtttatcatt 52636911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 287 - 325
Target Start/End: Original strand, 53300032 - 53300070
Alignment:
Q  287 aaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||||||||||||| ||||| ||||||||||||||    
T  53300032 aaaatatattaatcataaatattaatttatcattctcta 53300070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 325
Target Start/End: Complemental strand, 4441989 - 4441948
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||||||||||||||||| |||| ||||||| ||||||    
T  4441989 ttaaaaatatattaatcataagcattaatttatcactctcta 4441948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 12708820 - 12708759
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  ||||||||| | |||||||| | |||| ||||||||||||||    
T  12708820 ttgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctcta 12708759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 321
Target Start/End: Original strand, 16878814 - 16878851
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattc 321  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  16878814 ttaaaaatatattaatcataagtattcttttatcattc 16878851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 316
Target Start/End: Complemental strand, 22891266 - 22891217
Alignment:
Q  267 ttataatacttttaatgttaaaaatatattaatcataagtattagtttat 316  Q
    |||||||| | ||||| |||||||||||| ||||||||| ||||||||||    
T  22891266 ttataatattcttaatattaaaaatatatgaatcataaggattagtttat 22891217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 316
Target Start/End: Complemental strand, 22942930 - 22942881
Alignment:
Q  267 ttataatacttttaatgttaaaaatatattaatcataagtattagtttat 316  Q
    |||||||| | ||||| |||||||||||| ||||||||| ||||||||||    
T  22942930 ttataatattcttaatattaaaaatatatgaatcataaggattagtttat 22942881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 28175450 - 28175389
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  ||||||||| | |||||||| | |||| ||||||||||||||    
T  28175450 ttgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctcta 28175389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 28880086 - 28880147
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||||||||||||||||||  |||| ||||||| ||||||    
T  28880086 ttgttataatattcttaaaattaaaaatatattaatcataaacattaatttatcactctcta 28880147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 29114229 - 29114168
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  ||||||||| | |||||||| | |||| ||||||||||||||    
T  29114229 ttgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctcta 29114168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 30198757 - 30198696
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  ||||||||| | |||||||| | |||| ||||||||||||||    
T  30198757 ttgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctcta 30198696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 38136820 - 38136759
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  ||||||||| | |||||||| | |||| ||||||||||||||    
T  38136820 ttgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctcta 38136759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 266 - 319
Target Start/End: Original strand, 39421912 - 39421965
Alignment:
Q  266 gttataatacttttaatgttaaaaatatattaatcataagtattagtttatcat 319  Q
    ||||||||| | ||||  ||||||||||||||||||| ||||||||||| ||||    
T  39421912 gttataatattcttaaaattaaaaatatattaatcatgagtattagtttgtcat 39421965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 325
Target Start/End: Complemental strand, 50494636 - 50494579
Alignment:
Q  268 tataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||||||  ||||||||||| |||||||| | |||| | ||||||||||||    
T  50494636 tataatacttttaaaattaaaaatatagtaatcatatgcattaatctatcattctcta 50494579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 266 - 322
Target Start/End: Complemental strand, 17115120 - 17115065
Alignment:
Q  266 gttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattct 322  Q
    ||||||||| ||||||  || |||||||||||||| ||||||||| |||||||||||    
T  17115120 gttataata-ttttaaaatttaaaatatattaatcttaagtattaatttatcattct 17115065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 264 - 304
Target Start/End: Original strand, 18369792 - 18369832
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataa 304  Q
    |||||| ||||||||||| ||||||||||||||||| ||||    
T  18369792 ttgttacaatacttttaaagttaaaaatatattaataataa 18369832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 264 - 304
Target Start/End: Complemental strand, 36593131 - 36593091
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataa 304  Q
    |||||| ||||||||||| ||||||||||||||||| ||||    
T  36593131 ttgttacaatacttttaaagttaaaaatatattaataataa 36593091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 264 - 316
Target Start/End: Complemental strand, 43929791 - 43929739
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttat 316  Q
    ||||||||||| ||||||  |||||||||| ||| |||||||||||| |||||    
T  43929791 ttgttataatatttttaaaattaaaaatatgttattcataagtattaatttat 43929739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 264 - 304
Target Start/End: Complemental strand, 52430561 - 52430521
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataa 304  Q
    ||||||||||| ||||||  |||||||||||||||||||||    
T  52430561 ttgttataatatttttaaaattaaaaatatattaatcataa 52430521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 264 - 319
Target Start/End: Original strand, 54806565 - 54806621
Alignment:
Q  264 ttgttataatacttttaatgttaaaaat-atattaatcataagtattagtttatcat 319  Q
    ||||||||||| | ||||  |||||||  ||||||||||||||||||||||||||||    
T  54806565 ttgttataatattcttaaaattaaaaagcatattaatcataagtattagtttatcat 54806621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 4e-18; HSPs: 63)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 264 - 323
Target Start/End: Original strand, 50402836 - 50402895
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctc 323  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||    
T  50402836 ttgttataatatttttaaaattaaaaatatattaatcataagtattagtttatcattctc 50402895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 262 - 325
Target Start/End: Original strand, 50247689 - 50247752
Alignment:
Q  262 tcttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||| ||||||| ||||||  |||||| |||||||||||||||||||||||||||||||||||    
T  50247689 tcttgctataatatttttaaaattaaaagtatattaatcataagtattagtttatcattctcta 50247752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 268 - 325
Target Start/End: Complemental strand, 1688199 - 1688142
Alignment:
Q  268 tataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||| ||||||  |||||| |||||||||||||||||||||||||||||||||||    
T  1688199 tataatatttttaaaattaaaagtatattaatcataagtattagtttatcattctcta 1688142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 11017696 - 11017757
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  11017696 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 11017757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 23871449 - 23871388
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  23871449 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 23871388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 33991636 - 33991697
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  33991636 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 33991697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 42162039 - 42161978
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  |||||| |||||||||||||| ||||||||||||||||||||    
T  42162039 ttgttataatatttttaaaattaaaagtatattaatcataaatattagtttatcattctcta 42161978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 266 - 325
Target Start/End: Original strand, 23079871 - 23079930
Alignment:
Q  266 gttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||||| || |||||||||| ||||||||||||||||  ||||||||||||||    
T  23079871 gttataatactttcaaagttaaaaatacattaatcataagtatttatttatcattctcta 23079930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 1523690 - 1523748
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattct 322  Q
    ||||||||||| | ||||  |||||| ||||||||||||||||||||||||||||||||    
T  1523690 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattct 1523748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 2175429 - 2175490
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||| ||||||||||||||||||||    
T  2175429 ttgttataatattcttaaaattaaaagtatattaatcataaatattagtttatcattctcta 2175490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 5883589 - 5883529
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||| ||||||| ||||||    
T  5883589 ttgttataata-ttttaaaattaaaaatatattaatcataagtattaatttatcactctcta 5883529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 12293907 - 12293968
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| ||||||||| |||||||||||||||||||||||||    
T  12293907 ttgttataatattcttaaaattaaaagtatattaataataagtattagtttatcattctcta 12293968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 13061383 - 13061322
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||| ||||    
T  13061383 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattttcta 13061322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 13255439 - 13255500
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  | |||| |||||||||||||||||||||||||||||||||||    
T  13255439 ttgttataatattcttaaaatcaaaagtatattaatcataagtattagtttatcattctcta 13255500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 14153206 - 14153267
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||| ||||||||||||||||||||    
T  14153206 ttgttataatattcttaaaattaaaagtatattaatcataaatattagtttatcattctcta 14153267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 284 - 325
Target Start/End: Original strand, 15463926 - 15463967
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  15463926 ttaaaagtatattaatcataagtattagtttatcattctcta 15463967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 321
Target Start/End: Original strand, 27500079 - 27500136
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattc 321  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||    
T  27500079 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattc 27500136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 284 - 325
Target Start/End: Complemental strand, 30543329 - 30543288
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  30543329 ttaaaaatatattaatcataagtattaatttatcattctcta 30543288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 32299197 - 32299258
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||| ||||    
T  32299197 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattttcta 32299258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 32300150 - 32300211
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||| ||||    
T  32300150 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattttcta 32300211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 33854825 - 33854764
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||| ||| ||||||| |||||||||||| |||||||||| ||||||||| ||||||||    
T  33854825 ttgttatgatatttttaatattaaaaatatatgaatcataagtcttagtttattattctcta 33854764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 33926097 - 33926158
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||| ||| ||||||| |||||||||||| |||||||||| ||||||||| ||||||||    
T  33926097 ttgttatgatatttttaatattaaaaatatatgaatcataagtcttagtttattattctcta 33926158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 39889644 - 39889583
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| |  |||  |||||| |||||||||||||||||||||||||||||||||||    
T  39889644 ttgttataatattcataaaattaaaagtatattaatcataagtattagtttatcattctcta 39889583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 42488613 - 42488552
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  | |||| |||||||||||||||||||||||||||||||||||    
T  42488613 ttgttataatattcttaaaatcaaaagtatattaatcataagtattagtttatcattctcta 42488552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 43530284 - 43530223
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||||| ||||  |||||||||||||||||||||| |||| ||||||| ||||||    
T  43530284 ttgttataatactcttaaaattaaaaatatattaatcataagcattaatttatcactctcta 43530223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 45565225 - 45565286
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||| || ||||||  |||||| |||||||||||||||||| ||||||||||||||||    
T  45565225 ttgttatagtatttttaaaattaaaagtatattaatcataagtataagtttatcattctcta 45565286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 47905675 - 47905614
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||| ||||||||||||||||||||||    
T  47905675 ttgttataatattcttaaaattaaaagtatattaatcattagtattagtttatcattctcta 47905614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 320
Target Start/End: Complemental strand, 36668635 - 36668579
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcatt 320  Q
    ||||||||||| | ||||  |||||||||||||||||||||| ||||||||||||||    
T  36668635 ttgttataatattcttaaaattaaaaatatattaatcataagcattagtttatcatt 36668579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 266 - 325
Target Start/End: Original strand, 17675293 - 17675352
Alignment:
Q  266 gttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||| | ||||  |||||| |||||||||||||| ||||||||||||||||||||    
T  17675293 gttataatattcttaaaattaaaagtatattaatcataaatattagtttatcattctcta 17675352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 267 - 322
Target Start/End: Complemental strand, 26757138 - 26757083
Alignment:
Q  267 ttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattct 322  Q
    |||||||| | ||||  |||||| ||||||||||||||||||||||||||||||||    
T  26757138 ttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattct 26757083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 287 - 322
Target Start/End: Original strand, 28748308 - 28748343
Alignment:
Q  287 aaaatatattaatcataagtattagtttatcattct 322  Q
    ||||||||||||||||||||||||||||||||||||    
T  28748308 aaaatatattaatcataagtattagtttatcattct 28748343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 266 - 325
Target Start/End: Complemental strand, 41432746 - 41432687
Alignment:
Q  266 gttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||| | ||||  ||||||||||||||||||||||||||| ||||| ||||||||    
T  41432746 gttataatattcttaaaattaaaaatatattaatcataagtattaatttattattctcta 41432687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 322
Target Start/End: Original strand, 1071087 - 1071125
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattct 322  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  1071087 ttaaaaatatattaatcataaatattagtttatcattct 1071125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 325
Target Start/End: Complemental strand, 9173732 - 9173674
Alignment:
Q  267 ttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||  |||||  |||||||||||||||||||||| |||||||||||||| ||||    
T  9173732 ttataatatatttaaatttaaaaatatattaatcataagcattagtttatcattatcta 9173674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 36385434 - 36385488
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatca 318  Q
    ||||||||||| ||||||  |||||||| |||||||||||||||||| |||||||    
T  36385434 ttgttataatatttttaaaattaaaaatgtattaatcataagtattaatttatca 36385488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 2925921 - 2925860
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||| ||||||||| ||||    
T  2925921 ttgttataatattcttaaaattaaaagtatattaatcataagtattattttatcattttcta 2925860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 5970427 - 5970366
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||| ||||||| |||| ||||||||  |||||||||||||||||||    
T  5970427 ttgttataatattcttaatattaaaaacatatcaatcataaacattagtttatcattctcta 5970366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 24436918 - 24436857
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||||||||||  |||||||||||||||||| ||  |||| ||||||| ||||||    
T  24436918 ttgttataatacttttaaaattaaaaatatattaatcaaaaacattaatttatcactctcta 24436857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 38857999 - 38857938
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||| |||||||||||| |||||| |  |||||||||||||||||||    
T  38857999 ttgttataatattcttaatattaaaaatatatgaatcattatcattagtttatcattctcta 38857938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 42806265 - 42806326
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  | |||||||||| |||||||||||||| ||||||| ||||||    
T  42806265 ttgttataatatttttaaaataaaaaatatatcaatcataagtattaatttatcactctcta 42806326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 47206410 - 47206349
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| ||||||||||||||||||| |||||| ||||||||    
T  47206410 ttgttataatattcttaaaattaaaagtatattaatcataagtatttgtttataattctcta 47206349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 51246560 - 51246499
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||| | ||||||  |||||| ||||||||||||||  |||||||||||||||||||    
T  51246560 ttgttataaaatttttaaaattaaaagtatattaatcataaagattagtttatcattctcta 51246499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 264 - 324
Target Start/End: Complemental strand, 43036309 - 43036249
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctct 324  Q
    ||||||||||| | ||||  ||||||||||||||||||||||| ||| ||||||| |||||    
T  43036309 ttgttataatattcttaaaattaaaaatatattaatcataagtcttaatttatcactctct 43036249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 323
Target Start/End: Original strand, 1278584 - 1278623
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctc 323  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  1278584 ttaaaaatatattaatcataagcattaatttatcattctc 1278623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 326
Target Start/End: Original strand, 9595658 - 9595718
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctctac 326  Q
    ||||||||||||||| || |||||||||| ||| ||  ||||||||| |||||||||||||||    
T  9595658 ttgttataatactttcaaagttaaaaatacattgat--taagtattaatttatcattctctac 9595718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 325
Target Start/End: Original strand, 26345722 - 26345781
Alignment:
Q  266 gttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||| ||||||  | | |||||||||||||||||| |||| ||||||||||||||    
T  26345722 gttataatatttttaaaataataaatatattaatcataagcattaatttatcattctcta 26345781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 325
Target Start/End: Complemental strand, 28848783 - 28848724
Alignment:
Q  266 gttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||| ||||||  ||||||||||| |||||||| | |||| ||||||||||||||    
T  28848783 gttataatatttttaaaattaaaaatatagtaatcataggcattaatttatcattctcta 28848724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 325
Target Start/End: Complemental strand, 51303139 - 51303100
Alignment:
Q  286 aaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||||||||||||||| |||| ||||||||||||||    
T  51303139 aaaaatatattaatcataagcattaatttatcattctcta 51303100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 896481 - 896423
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattct 322  Q
    ||||||||||| | ||||  |||||| ||||||||| ||||||||||||||| ||||||    
T  896481 ttgttataatattcttaaaattaaaagtatattaattataagtattagtttaccattct 896423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 286 - 320
Target Start/End: Original strand, 1063453 - 1063487
Alignment:
Q  286 aaaaatatattaatcataagtattagtttatcatt 320  Q
    ||||||||||||| |||||||||||||||||||||    
T  1063453 aaaaatatattaagcataagtattagtttatcatt 1063487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 267 - 325
Target Start/End: Original strand, 33579351 - 33579409
Alignment:
Q  267 ttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||| | ||||  |||||||||||||| ||||||| |||| ||||||||||||||    
T  33579351 ttataatattcttaaaattaaaaatatattagtcataagcattaatttatcattctcta 33579409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 34918728 - 34918670
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattct 322  Q
    ||||||||||| | ||||  | |||||||||||||||||||| ||||||||| ||||||    
T  34918728 ttgttataatattcttaaaataaaaaatatattaatcataagcattagtttaccattct 34918670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 325
Target Start/End: Complemental strand, 4204746 - 4204705
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| |||||||| |||||| ||||||||||||||    
T  4204746 ttaaaaatatagtaatcatatgtattaatttatcattctcta 4204705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 17760471 - 17760410
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  ||||||||| | |||||||| | |||| ||||||||||||||    
T  17760471 ttgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctcta 17760410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 28718799 - 28718738
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||| ||||| | ||||| || ||||||||| ||||||||| |||||||||||||| ||||    
T  28718799 ttgttgtaatattcttaatattgaaaatatatgaatcataagcattagtttatcattttcta 28718738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 34154324 - 34154263
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  ||||||||| | |||||||| | |||| ||||||||||||||    
T  34154324 ttgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctcta 34154263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 325
Target Start/End: Original strand, 34738430 - 34738471
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||||||||||||| ||||| ||||| ||||||||    
T  34738430 ttaaaaatatattaatcataactattaatttataattctcta 34738471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 37649602 - 37649541
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  ||||||||| | |||||||| | |||| ||||||||||||||    
T  37649602 ttgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctcta 37649541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 39886910 - 39886849
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||| || ||||||   |||||||||| |||||||| |||||| ||||||||||||||    
T  39886910 ttgttatattatttttaaaactaaaaatataataatcatatgtattaatttatcattctcta 39886849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 41817285 - 41817224
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  ||||||||| | |||||||| | |||| ||||||||||||||    
T  41817285 ttgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctcta 41817224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 293 - 325
Target Start/End: Original strand, 26940703 - 26940735
Alignment:
Q  293 tattaatcataagtattagtttatcattctcta 325  Q
    |||||||||||||||||||||||||||| ||||    
T  26940703 tattaatcataagtattagtttatcattttcta 26940735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 268 - 316
Target Start/End: Complemental strand, 40707186 - 40707138
Alignment:
Q  268 tataatacttttaatgttaaaaatatattaatcataagtattagtttat 316  Q
    ||||||| ||||||| |||||| ||||| ||| ||||||||||||||||    
T  40707186 tataatatttttaatattaaaagtatatcaattataagtattagtttat 40707138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 50476623 - 50476679
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcatt 320  Q
    ||||||||||| | ||||  |||||||||||| ||| ||||| ||||||||||||||    
T  50476623 ttgttataatattcttaaaattaaaaatatatcaataataagcattagtttatcatt 50476679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 1673 - 1734
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  ||||||||||||||||||||||||||||||||||||||||||    
T  1673 ttgttataatattcttaaaattaaaaatatattaatcataagtattagtttatcattctcta 1734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 6e-17; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 38235889 - 38235950
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  |||||| |||||||||||||||||||||||||||||||||||    
T  38235889 ttgttataatatttttaaaattaaaagtatattaatcataagtattagtttatcattctcta 38235950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 5968039 - 5967978
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  5968039 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 5967978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 41002237 - 41002176
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  ||||||||||||||||||||||||||||||||||||| ||||    
T  41002237 ttgttataatattcttaaaattaaaaatatattaatcataagtattagtttatcattatcta 41002176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 42620338 - 42620277
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  42620338 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 42620277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 43665155 - 43665094
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||||||||||||||||||||| |||||||||||||||||    
T  43665155 ttgttataatattcttaaaattaaaaatatattaatcataagtagtagtttatcattctcta 43665094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 266 - 326
Target Start/End: Original strand, 20513405 - 20513465
Alignment:
Q  266 gttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctctac 326  Q
    ||||||||||||| || |||||||||| ||||||||||||||||  |||||||||||||||    
T  20513405 gttataatactttcaaagttaaaaatacattaatcataagtatttatttatcattctctac 20513465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 264 - 324
Target Start/End: Complemental strand, 33113625 - 33113565
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctct 324  Q
    ||||||||||| | ||||  |||||| ||||||||||||||||||||||||||||||||||    
T  33113625 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctct 33113565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 287 - 325
Target Start/End: Complemental strand, 23620757 - 23620719
Alignment:
Q  287 aaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||||||||||||||||||||||||||||||||||    
T  23620757 aaaatatattaatcataagtattagtttatcattctcta 23620719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 267 - 325
Target Start/End: Complemental strand, 38233719 - 38233661
Alignment:
Q  267 ttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||| ||||||| |||||||||||| ||||||||  |||||||||||||||||||    
T  38233719 ttataatatttttaatattaaaaatatatgaatcataaacattagtttatcattctcta 38233661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 264 - 326
Target Start/End: Original strand, 44720176 - 44720238
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctctac 326  Q
    ||||||||||| | ||||  |||||| |||| |||||||||||||||||||||||||||||||    
T  44720176 ttgttataatattcttaaaattaaaagtatactaatcataagtattagtttatcattctctac 44720238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 267 - 325
Target Start/End: Complemental strand, 47275985 - 47275927
Alignment:
Q  267 ttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  47275985 ttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 47275927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 4787989 - 4787928
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  |||||||||||||||||||||| |||| ||||||| ||||||    
T  4787989 ttgttataatatttttaaaattaaaaatatattaatcataagcattaatttatcactctcta 4787928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 28437528 - 28437467
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||| ||||||||||||||||||||    
T  28437528 ttgttataatattcttaaaattaaaagtatattaatcataaatattagtttatcattctcta 28437467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 33406618 - 33406557
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||| ||||||||||||||||||    
T  33406618 ttgttataatattcttaaaattaaaagtatattaatcataagtgttagtttatcattctcta 33406557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 33810198 - 33810137
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||| ||||||||||||||||||||    
T  33810198 ttgttataatattcttaaaattaaaagtatattaatcataaatattagtttatcattctcta 33810137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 284 - 325
Target Start/End: Complemental strand, 34652019 - 34651978
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  34652019 ttaaaagtatattaatcataagtattagtttatcattctcta 34651978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 42112945 - 42112884
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||| |||| | ||||| |||||||||||| ||||||||| |||||||||||||||||||    
T  42112945 ttgttaaaatattcttaatattaaaaatatatgaatcataagcattagtttatcattctcta 42112884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 284 - 325
Target Start/End: Original strand, 42220155 - 42220196
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  42220155 ttaaaaatatattaatcataagtattagtttatcattatcta 42220196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 43188952 - 43189013
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||| ||||    
T  43188952 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattttcta 43189013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 325
Target Start/End: Complemental strand, 22556689 - 22556629
Alignment:
Q  265 tgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||||| | ||||  |||||||||||||||||||||| |||||||||||| ||||||    
T  22556689 tgttataatattcttaaaattaaaaatatattaatcataagcattagtttatcactctcta 22556629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 273 - 325
Target Start/End: Complemental strand, 46611860 - 46611808
Alignment:
Q  273 tacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||| |||| |||||||||| ||||||||||||||||||||||||| ||||||    
T  46611860 tactcttaaagttaaaaatacattaatcataagtattagtttatcactctcta 46611808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 278 - 325
Target Start/End: Original strand, 23551479 - 23551526
Alignment:
Q  278 ttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||| |||||||||||| ||||||||| |||||||||||||||||||    
T  23551479 ttaatattaaaaatatatgaatcataagcattagtttatcattctcta 23551526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 264 - 323
Target Start/End: Complemental strand, 43778561 - 43778502
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctc 323  Q
    ||||||||||| | ||||  |||||| |||||||||||||| ||||||||||||||||||    
T  43778561 ttgttataatattcttaaaattaaaagtatattaatcataaatattagtttatcattctc 43778502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 325
Target Start/End: Complemental strand, 7667124 - 7667090
Alignment:
Q  291 tatattaatcataagtattagtttatcattctcta 325  Q
    |||||||||||||||||||||||||||||||||||    
T  7667124 tatattaatcataagtattagtttatcattctcta 7667090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 36747390 - 36747452
Alignment:
Q  264 ttgttataatacttttaatgttaaaaa-tatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  ||||||| |||||||||||||||||||||||| ||||||||||    
T  36747390 ttgttataatattcttaaaattaaaaagtatattaatcataagtattagtttttcattctcta 36747452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 36845427 - 36845366
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  ||||||||||| ||||||||||||||| |||| |||||||||    
T  36845427 ttgttataatattcttaaaattaaaaatatagtaatcataagtattaatttaacattctcta 36845366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 38138026 - 38138087
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| |||| |  |||||||| ||||||||||||| |||| ||||||||||||||    
T  38138026 ttgttataatatttttgaaattaaaaatgtattaatcataagcattaatttatcattctcta 38138087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 41471533 - 41471594
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||| ||||| ||||||  |||||||||||||| ||| ||| |||||||||||||||||||    
T  41471533 ttgttttaatatttttaaaattaaaaatatattactcaaaagcattagtttatcattctcta 41471594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 325
Target Start/End: Complemental strand, 23465984 - 23465925
Alignment:
Q  266 gttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||| | ||||  ||||| |||||||||||||||| |||| ||||||||||||||    
T  23465984 gttataatattcttaaaattaaatatatattaatcataagaattaatttatcattctcta 23465925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 322
Target Start/End: Original strand, 25335422 - 25335461
Alignment:
Q  284 ttaaaaatatattaatcataagt-attagtttatcattct 322  Q
    ||||||||||||||||||||||| ||||||||||||||||    
T  25335422 ttaaaaatatattaatcataagtcattagtttatcattct 25335461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 325
Target Start/End: Original strand, 45510439 - 45510498
Alignment:
Q  266 gttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||| ||||||  || ||||||||||||||||||  |||| ||||||||||||||    
T  45510439 gttataatatttttaaaatttaaaatatattaatcataaacattaatttatcattctcta 45510498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 284 - 326
Target Start/End: Complemental strand, 7181438 - 7181396
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctctac 326  Q
    |||||||||||||||||||||| |||  |||||||||||||||    
T  7181438 ttaaaaatatattaatcataagcattcttttatcattctctac 7181396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 326
Target Start/End: Original strand, 13858417 - 13858479
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctctac 326  Q
    ||||||||||||| | ||| ||||||| |||||||||||||| |||  ||||||||| |||||    
T  13858417 ttgttataatactctcaatattaaaaacatattaatcataagcattcatttatcattatctac 13858479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 33187833 - 33187779
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatca 318  Q
    ||||||||||| | ||||  |||||||||||||||||||||| |||| |||||||    
T  33187833 ttgttataatattcttaaaattaaaaatatattaatcataagcattaatttatca 33187779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 42622446 - 42622504
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattct 322  Q
    ||||||||||| |  |||| ||||||||| || ||||||||| ||||||||||||||||    
T  42622446 ttgttataatattcgtaatattaaaaatacatgaatcataagcattagtttatcattct 42622504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 267 - 325
Target Start/End: Original strand, 46449270 - 46449328
Alignment:
Q  267 ttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||| | ||||  |||||| ||||||||| |||||||||| ||||||||||||||    
T  46449270 ttataatattcttaaaattaaaagtatattaattataagtattaatttatcattctcta 46449328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 326
Target Start/End: Complemental strand, 48049602 - 48049540
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctctac 326  Q
    ||||||||||||||| ||  ||||||||| |||||| |||||| ||| |||||||| ||||||    
T  48049602 ttgttataatactttcaaaattaaaaatacattaattataagtgttaatttatcatgctctac 48049540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 4058132 - 4058071
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  ||||||||| | |||||||| | |||| ||||||||||||||    
T  4058132 ttgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctcta 4058071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 13044242 - 13044303
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||| || ||||||  ||||||||||| |||||||| | |||| ||||||||||||||    
T  13044242 ttgttatattatttttaaaattaaaaatatagtaatcatatgcattaatttatcattctcta 13044303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 325
Target Start/End: Original strand, 16568613 - 16568654
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||| || ||||||||||||| |||||||||||||||||||    
T  16568613 ttaaatatctattaatcataagcattagtttatcattctcta 16568654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 325
Target Start/End: Complemental strand, 16597049 - 16597008
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||| || ||||||||||||| |||||||||||||||||||    
T  16597049 ttaaatatctattaatcataagcattagtttatcattctcta 16597008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 16805553 - 16805492
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  ||||||||| | |||||||| | |||| ||||||||||||||    
T  16805553 ttgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctcta 16805492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 23329301 - 23329362
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||  ||||||  ||||||||||| ||||||||| ||||| ||||||||| ||||    
T  23329301 ttgttataatttttttaaaattaaaaatataataatcataactattaatttatcattatcta 23329362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 325
Target Start/End: Complemental strand, 24923360 - 24923319
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||||||||||||||||  |||| ||||||||||||||    
T  24923360 ttaaaaatatattaatcataatcattaatttatcattctcta 24923319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 325
Target Start/End: Original strand, 31055467 - 31055508
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||||||||||||||||| |||| ||||||| ||||||    
T  31055467 ttaaaaatatattaatcataagcattaatttatcactctcta 31055508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 32650377 - 32650316
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  ||||||||| | |||||||| | |||| ||||||||||||||    
T  32650377 ttgttataatatttttaaaattaaaaataaaataatcatatgcattaatttatcattctcta 32650316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 38505330 - 38505269
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  ||||||||||| |||||||  | |||| ||||||||||||||    
T  38505330 ttgttataatatttttaaaattaaaaatatagtaatcatctgcattaatttatcattctcta 38505269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 42266993 - 42266932
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  ||||||||||| ||| |||||| |||| ||||||||||||||    
T  42266993 ttgttataatattcttaaaattaaaaatatagtaaacataagcattaatttatcattctcta 42266932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 44487321 - 44487260
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||| || | |||| |||||||||||||||| |||||| |||| ||||||| ||||||    
T  44487321 ttgttatagtattcttaaagttaaaaatatattaaccataagcattaatttatcactctcta 44487260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 325
Target Start/End: Original strand, 48935068 - 48935128
Alignment:
Q  267 ttataatacttttaatgttaaaaatat--attaatcataagtattagtttatcattctcta 325  Q
    |||||||| ||||||  ||||||||||  |||||||||||| |||| ||||||||||||||    
T  48935068 ttataatatttttaaaattaaaaatatatattaatcataagcattaatttatcattctcta 48935128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 6e-17; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 33718276 - 33718337
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  ||||||||||||||||||||||||||||||||||||||||||    
T  33718276 ttgttataatattcttaaaattaaaaatatattaatcataagtattagtttatcattctcta 33718337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 6044628 - 6044689
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||| |||||||||||| ||| |||||||||||||||||||||||||    
T  6044628 ttgttataatattcttaatattaaaaatatatgaatgataagtattagtttatcattctcta 6044689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 264 - 324
Target Start/End: Complemental strand, 13293970 - 13293910
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctct 324  Q
    ||||||||||| ||||||  | ||||||||||||||||||||||||| |||||||||||||    
T  13293970 ttgttataatatttttaaaataaaaaatatattaatcataagtattaatttatcattctct 13293910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 266 - 325
Target Start/End: Complemental strand, 19389812 - 19389753
Alignment:
Q  266 gttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||| ||||||  |||||||||||||||||||||| |||| ||||||||||||||    
T  19389812 gttataatatttttaaaattaaaaatatattaatcataagcattaatttatcattctcta 19389753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 267 - 325
Target Start/End: Original strand, 32760854 - 32760912
Alignment:
Q  267 ttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  32760854 ttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 32760912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 267 - 325
Target Start/End: Original strand, 35868928 - 35868986
Alignment:
Q  267 ttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  35868928 ttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 35868986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 267 - 325
Target Start/End: Complemental strand, 38302341 - 38302283
Alignment:
Q  267 ttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  38302341 ttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 38302283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 284 - 325
Target Start/End: Complemental strand, 4648953 - 4648912
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  4648953 ttaaaagtatattaatcataagtattagtttatcattctcta 4648912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 6491279 - 6491340
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||||||||||||||||||| |||| ||||||||||||||    
T  6491279 ttgttataatattcttaaaattaaaaatatattaatcataagcattaatttatcattctcta 6491340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 17092992 - 17093053
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||| ||||||||||||||||    
T  17092992 ttgttataatattcttaaaattaaaagtatattaatcataagtataagtttatcattctcta 17093053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 25027017 - 25027078
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| ||||||||| |||||||||||||||||||||||||    
T  25027017 ttgttataatattcttaaaattaaaagtatattaatgataagtattagtttatcattctcta 25027078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 268 - 325
Target Start/End: Complemental strand, 25598751 - 25598694
Alignment:
Q  268 tataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||| ||||||  |||||| ||||||||||||||||||||| |||||||||||||    
T  25598751 tataatatttttaaaattaaaagtatattaatcataagtattagcttatcattctcta 25598694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 27480158 - 27480097
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| ||||||||||||| |||||||||||||||||||||    
T  27480158 ttgttataatattcttaaaattaaaagtatattaatcatatgtattagtttatcattctcta 27480097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 35701498 - 35701559
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  || ||| |||||||||||||||||||||||||||||||||||    
T  35701498 ttgttataatattcttaaaatttaaagtatattaatcataagtattagtttatcattctcta 35701559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 41695072 - 41695133
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  | |||| |||||||||||||||||||| ||||||||||||||    
T  41695072 ttgttataatatttttaaaatcaaaagtatattaatcataagtattaatttatcattctcta 41695133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 325
Target Start/End: Original strand, 1658275 - 1658333
Alignment:
Q  267 ttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||| | ||||  |||||| ||||||||| |||||||||||||||||||||||||    
T  1658275 ttataatattcttaaaattaaaagtatattaattataagtattagtttatcattctcta 1658333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 2021075 - 2021136
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||| ||||| ||||||||||||||    
T  2021075 ttgttataatattcttaaaattaaaagtatattaatcataaatattaatttatcattctcta 2021136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 326
Target Start/End: Original strand, 10295578 - 10295642
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcata--agtattagtttatcattctctac 326  Q
    ||||||||||| | ||||  |||||| |||||||||||||  |||||||||||||||||||||||    
T  10295578 ttgttataatattcttaaaattaaaagtatattaatcatataagtattagtttatcattctctac 10295642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 26018836 - 26018897
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||||||||||||||||||| |||| ||||||| ||||||    
T  26018836 ttgttataatattcttaaaattaaaaatatattaatcataagcattaatttatcactctcta 26018897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 26149698 - 26149759
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| ||||| |||||||| ||||||||||||||||||||    
T  26149698 ttgttataatattcttaaaattaaaagtatatcaatcataaatattagtttatcattctcta 26149759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 35704707 - 35704768
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||| || |||||||||| |||||||||||| | || ||||||||||||||    
T  35704707 ttgttataatattttgaaagttaaaaatacattaatcataagcactaatttatcattctcta 35704768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 326
Target Start/End: Complemental strand, 5696566 - 5696506
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctctac 326  Q
    ||||||||||||||| ||  |||||  ||||||||||||||  ||||||||||||||||||||    
T  5696566 ttgttataatactttcaaaattaaa--tatattaatcataaacattagtttatcattctctac 5696506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 317
Target Start/End: Original strand, 6816320 - 6816371
Alignment:
Q  266 gttataatacttttaatgttaaaaatatattaatcataagtattagtttatc 317  Q
    ||||||||| ||||||  |||||||||||||||||||||| ||| |||||||    
T  6816320 gttataatatttttaaaattaaaaatatattaatcataagcattggtttatc 6816371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 325
Target Start/End: Complemental strand, 9684775 - 9684716
Alignment:
Q  266 gttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||| | ||||  |||||||||||||||||||||| |||| ||||||||| ||||    
T  9684775 gttataatattcttaaaattaaaaatatattaatcataagcattaatttatcattttcta 9684716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 278 - 325
Target Start/End: Original strand, 13450578 - 13450625
Alignment:
Q  278 ttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||| |||||||||||| |||||| || |||||||||||||||||||    
T  13450578 ttaatattaaaaatatatgaatcatgagcattagtttatcattctcta 13450625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 325
Target Start/End: Original strand, 39011929 - 39011987
Alignment:
Q  266 gttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||| ||||||  |||||||||||||||||||||| |||| ||||||| ||||||    
T  39011929 gttataata-ttttaaaattaaaaatatattaatcataagcattaatttatcactctcta 39011987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 1935093 - 1935039
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatca 318  Q
    ||||||||||| | ||||  |||||||||||||||||||||| |||| |||||||    
T  1935093 ttgttataatattcttaaaattaaaaatatattaatcataagcattaatttatca 1935039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 326
Target Start/End: Complemental strand, 2164058 - 2163996
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctctac 326  Q
    ||||||||||||||| ||  |||||||||  ||||| ||||||| || |||||||||||||||    
T  2164058 ttgttataatactttcaaaattaaaaatactttaatgataagtactaatttatcattctctac 2163996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 4841695 - 4841641
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatca 318  Q
    ||||||||||| | ||||  |||||||||||||||||||||| |||| |||||||    
T  4841695 ttgttataatattcttaaaattaaaaatatattaatcataagcattaatttatca 4841641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 318
Target Start/End: Complemental strand, 12063972 - 12063918
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatca 318  Q
    ||||||||||| ||||||  ||||||||||||||| |||||| |||| |||||||    
T  12063972 ttgttataatatttttaaaattaaaaatatattaaccataagcattaatttatca 12063918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 284 - 326
Target Start/End: Original strand, 12150688 - 12150730
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctctac 326  Q
    ||||||||||||||||||||||||||  ||||||||| |||||    
T  12150688 ttaaaaatatattaatcataagtattcatttatcattatctac 12150730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 29799735 - 29799785
Alignment:
Q  267 ttataatacttttaatgttaaaaatatattaatcataagtattagtttatc 317  Q
    |||||||| ||||||  |||||||||||||||||||||| |||| ||||||    
T  29799735 ttataatatttttaaaattaaaaatatattaatcataagcattaatttatc 29799785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 2679872 - 2679811
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  ||||||||||| |||||||| | |||| ||||||||| ||||    
T  2679872 ttgttataatatttttaaaattaaaaatatagtaatcatatgcattaatttatcattttcta 2679811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 15399910 - 15399971
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  |||||||||||||||||||||  |||| | || |||||||||    
T  15399910 ttgttataatatttttaaaattaaaaatatattaatcataaaaattaatctagcattctcta 15399971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 28154785 - 28154846
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  | |||||||||||||||||||  |||| ||||||||||||||    
T  28154785 ttgttataatattcttaaaataaaaaatatattaatcataaacattaatttatcattctcta 28154846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 35705032 - 35704971
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||||||||||||||||||| |||| ||||| ||| ||||    
T  35705032 ttgttataatattcttaaaattaaaaatatattaatcataagcattaatttatgattttcta 35704971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 317
Target Start/End: Complemental strand, 37508376 - 37508324
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatc 317  Q
    ||||||||||| ||||||  |||||| ||||||||| |||||||||||||||||    
T  37508376 ttgttataatatttttaaaattaaaagtatattaat-ataagtattagtttatc 37508324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 41923253 - 41923314
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  |||||||||| | ||||||| | |||||||||||||| ||||    
T  41923253 ttgttataatatttttaagattaaaaatatttgaatcatatgcattagtttatcattttcta 41923314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 264 - 324
Target Start/End: Original strand, 25779590 - 25779650
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctct 324  Q
    ||||||||||| | ||||  ||||||||||| |||| |||| ||||| |||||||||||||    
T  25779590 ttgttataatattcttaaaattaaaaatataataattataaatattaatttatcattctct 25779650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 265 - 325
Target Start/End: Original strand, 32824744 - 32824804
Alignment:
Q  265 tgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||||| | ||||  |||||||||||||||||||||  |||| ||||| ||||||||    
T  32824744 tgttataatattcttaaaattaaaaatatattaatcataaacattaatttattattctcta 32824804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 526 - 570
Target Start/End: Original strand, 35266266 - 35266310
Alignment:
Q  526 gaattgatcggtctaccacgcttcaaacgcatttgagactcattt 570  Q
    |||||||| ||||||||||||||||  |||| |||||||||||||    
T  35266266 gaattgattggtctaccacgcttcatgcgcagttgagactcattt 35266310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 284 - 320
Target Start/End: Complemental strand, 38120160 - 38120124
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcatt 320  Q
    |||||| |||||||||||||| |||||||||||||||    
T  38120160 ttaaaagtatattaatcataattattagtttatcatt 38120124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 6e-17; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 38593047 - 38593108
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||||||||||  ||||||  ||||||||||||||||||||||||||||||||||    
T  38593047 ttgttataatacttttaaaattaaaagcatattaatcataagtattagtttatcattctcta 38593108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 262 - 325
Target Start/End: Complemental strand, 30131874 - 30131811
Alignment:
Q  262 tcttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  30131874 tcttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 30131811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 2420754 - 2420815
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  2420754 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 2420815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 23163618 - 23163679
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  23163618 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 23163679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 29623331 - 29623392
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||| |||||||||||| ||||||||| |||||||||||||| ||||    
T  29623331 ttgttataatatttttaatattaaaaatatatgaatcataagcattagtttatcattttcta 29623392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 41961963 - 41961902
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  41961963 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 41961902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 43007508 - 43007447
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  43007508 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 43007447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 49860931 - 49860992
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  49860931 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 49860992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 265 - 325
Target Start/End: Complemental strand, 42583284 - 42583224
Alignment:
Q  265 tgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||||| | |||| ||||||| ||||||||||||||||| |||||||||||||||||    
T  42583284 tgttataatattcttaaagttaaaagtatattaatcataagtactagtttatcattctcta 42583224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 284 - 325
Target Start/End: Complemental strand, 3043094 - 3043053
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  3043094 ttaaaagtatattaatcataagtattagtttatcattctcta 3043053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 7661131 - 7661192
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| ||| |||||||||||||||||||||||||||||||    
T  7661131 ttgttataatattcttaaaattaaaagtatgttaatcataagtattagtttatcattctcta 7661192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 17642684 - 17642745
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||| ||||||||||||||||||||    
T  17642684 ttgttataatattcttaaaattaaaagtatattaatcataaatattagtttatcattctcta 17642745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 18257694 - 18257633
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||| |||||||||||| ||||||||  |||||||||||||||||||    
T  18257694 ttgttataatattcttaatattaaaaatatatgaatcataaacattagtttatcattctcta 18257633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 25428763 - 25428824
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||| ||||||||||||||    
T  25428763 ttgttataatattcttaaaattaaaagtatattaatcataagtattattttatcattctcta 25428824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 284 - 325
Target Start/End: Complemental strand, 30121488 - 30121447
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  30121488 ttaaaagtatattaatcataagtattagtttatcattctcta 30121447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 36796519 - 36796580
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||| ||||||||||||||||||||    
T  36796519 ttgttataatattcttaaaattaaaagtatattaatcataaatattagtttatcattctcta 36796580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 38526248 - 38526309
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||| ||||    
T  38526248 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattgtcta 38526309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 43237385 - 43237446
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| | |||||||||||||||||||||||||||||||||    
T  43237385 ttgttataatattcttaaaattaaaagtttattaatcataagtattagtttatcattctcta 43237446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 44412141 - 44412080
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  |||||| |||||||||| ||||||||| ||||||||||||||    
T  44412141 ttgttataatatttttaaaattaaaagtatattaatcgtaagtattaatttatcattctcta 44412080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 46017300 - 46017361
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  |||||| |||||||||||||||| ||| ||||||||||||||    
T  46017300 ttgttataatatttttaaaattaaaagtatattaatcataagttttattttatcattctcta 46017361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 268 - 325
Target Start/End: Complemental strand, 46312402 - 46312345
Alignment:
Q  268 tataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||| ||||||  |||||| |||||||||||||| ||||||||||||||||||||    
T  46312402 tataatatttttaaaattaaaagtatattaatcataaatattagtttatcattctcta 46312345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 46891481 - 46891542
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  ||||||||||||||||||||||||||| ||||||| ||||||    
T  46891481 ttgttataatattcttaaaattaaaaatatattaatcataagtattaatttatcagtctcta 46891542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 284 - 325
Target Start/End: Complemental strand, 47434260 - 47434219
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  47434260 ttaaaagtatattaatcataagtattagtttatcattctcta 47434219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 47714659 - 47714598
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| ||||||||||||||||||||| |||||||||||||    
T  47714659 ttgttataatattcttaaaattaaaagtatattaatcataagtattagcttatcattctcta 47714598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 47789432 - 47789371
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||| ||||    
T  47789432 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattttcta 47789371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 55439679 - 55439740
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||| ||||    
T  55439679 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattatcta 55439740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 284 - 325
Target Start/End: Original strand, 55445022 - 55445063
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  55445022 ttaaaagtatattaatcataagtattagtttatcattctcta 55445063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 266 - 325
Target Start/End: Original strand, 4247214 - 4247273
Alignment:
Q  266 gttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||| | ||||  |||||||||||||||||||||| |||| ||||||||||||||    
T  4247214 gttataatattcttaaaattaaaaatatattaatcataagcattaatttatcattctcta 4247273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 266 - 325
Target Start/End: Original strand, 13638523 - 13638582
Alignment:
Q  266 gttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||| | ||||  |||||||||||||||||||||| |||| ||||||||||||||    
T  13638523 gttataatattcttaaaattaaaaatatattaatcataagcattaatttatcattctcta 13638582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 266 - 325
Target Start/End: Complemental strand, 15499283 - 15499224
Alignment:
Q  266 gttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||| | ||||  || |||||||||||||||||||||||| ||||||||||||||    
T  15499283 gttataatattcttaaaatttaaaatatattaatcataagtattattttatcattctcta 15499224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 266 - 325
Target Start/End: Original strand, 32858927 - 32858986
Alignment:
Q  266 gttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||| | ||||  ||||||||||||||||| ||||||||| ||||||||||||||    
T  32858927 gttataatattcttaaaattaaaaatatattaatcgtaagtattaatttatcattctcta 32858986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 268 - 326
Target Start/End: Complemental strand, 105155 - 105097
Alignment:
Q  268 tataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctctac 326  Q
    ||||||||||| || |||||||||  ||||||||||||||||  |||||||||||||||    
T  105155 tataatactttcaaagttaaaaatgcattaatcataagtatttatttatcattctctac 105097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 39499293 - 39499351
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattct 322  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||| |||||    
T  39499293 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttattattct 39499351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 284 - 325
Target Start/End: Original strand, 30697486 - 30697527
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||||||||||||||||  |||||||||||||||||||    
T  30697486 ttaaaaatatattaatcataaacattagtttatcattctcta 30697527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 284 - 325
Target Start/End: Original strand, 38515352 - 38515393
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||| |||||||||||||||||||||||||| ||||||||    
T  38515352 ttaaaagtatattaatcataagtattagtttattattctcta 38515393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 284 - 325
Target Start/End: Complemental strand, 49682967 - 49682926
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||| |||||||||||||||||||||||||||||| ||||    
T  49682967 ttaaaagtatattaatcataagtattagtttatcattatcta 49682926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 285 - 325
Target Start/End: Original strand, 7302200 - 7302240
Alignment:
Q  285 taaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||||||||||||||||||||  ||||||||||||||    
T  7302200 taaaaatatattaatcataagtattgatttatcattctcta 7302240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 265 - 325
Target Start/End: Original strand, 27681899 - 27681959
Alignment:
Q  265 tgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||||| | ||||  |||||||||||||||||||||| |||| ||||||| ||||||    
T  27681899 tgttataatattcttaaaattaaaaatatattaatcataagcattaatttatcactctcta 27681959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 265 - 325
Target Start/End: Original strand, 54748408 - 54748467
Alignment:
Q  265 tgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||||| ||||||  |||||||||||||||||||||| |||| ||||||| ||||||    
T  54748408 tgttataata-ttttaaaattaaaaatatattaatcataagcattaatttatcactctcta 54748467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 2927939 - 2927993
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatca 318  Q
    ||||||||||| | ||||  |||||||||||||||||||||  ||||||||||||    
T  2927939 ttgttataatattcttaaaattaaaaatatattaatcataaacattagtttatca 2927993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 326
Target Start/End: Complemental strand, 9241636 - 9241574
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctctac 326  Q
    ||||||||||| | | ||  ||||||||||||||||||||||||||  ||||||||| |||||    
T  9241636 ttgttataatattctcaagattaaaaatatattaatcataagtatttatttatcattatctac 9241574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 19148262 - 19148316
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatca 318  Q
    ||||||||||| | ||||  |||||||||||||||||||||| |||| |||||||    
T  19148262 ttgttataatattcttaaaattaaaaatatattaatcataagcattaatttatca 19148316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 284 - 326
Target Start/End: Complemental strand, 32721048 - 32721006
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctctac 326  Q
    |||||||||||||||||||||| |||| ||||||| |||||||    
T  32721048 ttaaaaatatattaatcataagcattaatttatcactctctac 32721006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 267 - 325
Target Start/End: Complemental strand, 42134673 - 42134615
Alignment:
Q  267 ttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||| | ||||  |||||||||||||||||||||  ||||||||| |||||||||    
T  42134673 ttataatattattaaaattaaaaatatattaatcataaacattagtttagcattctcta 42134615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 326
Target Start/End: Original strand, 44979492 - 44979554
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctctac 326  Q
    ||||||||||||||| ||  ||||||||  |||||||||||| | || |||||||||||||||    
T  44979492 ttgttataatactttcaaaattaaaaattcattaatcataagcaataatttatcattctctac 44979554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 268 - 325
Target Start/End: Original strand, 3537305 - 3537362
Alignment:
Q  268 tataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||| ||||||  ||||||||||| |||||||| | |||| ||||||||||||||    
T  3537305 tataatatttttaaaattaaaaatatagtaatcatatgcattaatttatcattctcta 3537362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 321
Target Start/End: Complemental strand, 31178213 - 31178176
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattc 321  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  31178213 ttaaaagtatattaatcataactattagtttatcattc 31178176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 325
Target Start/End: Complemental strand, 31651411 - 31651370
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||||||||||||||||| |||| |||| |||||||||    
T  31651411 ttaaaaatatattaatcataagcattaatttaacattctcta 31651370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 33982725 - 33982664
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||| |||| |||||||||||||| ||||||||    
T  33982725 ttgttataatattcttaaaattaaaagtatatttatcacaagtattagtttattattctcta 33982664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 38639674 - 38639735
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  ||||||||| | |||||||| | |||| ||||||||||||||    
T  38639674 ttgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctcta 38639735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 48444600 - 48444661
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  |||||||||||||||||||||  |||  ||||||| ||||||    
T  48444600 ttgttataatatttttaaaattaaaaatatattaatcataaacattgatttatcactctcta 48444661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 50535093 - 50535032
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||| || ||||||  ||||||||||| |||||||| | |||||||||||||| ||||    
T  50535093 ttgttatattatttttaaaattaaaaatatagtaatcatatgcattagtttatcattttcta 50535032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 52620821 - 52620764
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattc 321  Q
    ||||||||||| ||||||  | |||||||||||||||||||| |||  ||||||||||    
T  52620821 ttgttataatatttttaaaataaaaaatatattaatcataagcattgatttatcattc 52620764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 284 - 324
Target Start/End: Complemental strand, 34729303 - 34729263
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctct 324  Q
    ||||||||||| ||||||||| ||||| |||||||||||||    
T  34729303 ttaaaaatatagtaatcataaatattaatttatcattctct 34729263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 262 - 326
Target Start/End: Original strand, 54917852 - 54917916
Alignment:
Q  262 tcttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctctac 326  Q
    |||||| |||||||| | ||| |||||||||||||||||||||| |||  || |||||| |||||    
T  54917852 tcttgtaataatactctcaatattaaaaatatattaatcataagcattcattaatcattttctac 54917916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 240 - 325
Target Start/End: Original strand, 210 - 296
Alignment:
Q  240 ataaattttt-aagtccagtctgtcttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||||| || |||| ||| | ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  210 ataaatttttcaaatccaatctatgttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 240 - 325
Target Start/End: Complemental strand, 2383 - 2297
Alignment:
Q  240 ataaattttt-aagtccagtctgtcttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||||| || |||| ||| | ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  2383 ataaatttttcaaatccaatctatgttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 2297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 267 - 325
Target Start/End: Original strand, 726046 - 726104
Alignment:
Q  267 ttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||| ||||||  |||||| |||||||||||||||||||||||||||||||||||    
T  726046 ttataatatttttaaaattaaaagtatattaatcataagtattagtttatcattctcta 726104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 4042059 - 4042120
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  4042059 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 4042120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 13765925 - 13765864
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  13765925 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 13765864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 32243570 - 32243631
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  32243570 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 32243631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 36567264 - 36567203
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  36567264 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 36567203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 38293983 - 38294044
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  38293983 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 38294044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 40357552 - 40357613
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  40357552 ttgttataatattcttaaaattaaaattatattaatcataagtattagtttatcattctcta 40357613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 44020434 - 44020495
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  44020434 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 44020495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 266 - 326
Target Start/End: Original strand, 42644742 - 42644802
Alignment:
Q  266 gttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctctac 326  Q
    ||||||||||||| || |||||||||| ||| ||||||||||||| |||||||||||||||    
T  42644742 gttataatactttcaaagttaaaaatacattgatcataagtattaatttatcattctctac 42644802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 262 - 325
Target Start/End: Complemental strand, 18018586 - 18018523
Alignment:
Q  262 tcttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  18018586 tcttgttataaaattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 18018523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 267 - 325
Target Start/End: Original strand, 32950974 - 32951032
Alignment:
Q  267 ttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||| |||||  |||||||||||||||||||||| ||||| ||||||||||||||    
T  32950974 ttataatatttttagagttaaaaatatattaatcataaatattaatttatcattctcta 32951032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 262 - 316
Target Start/End: Complemental strand, 36574436 - 36574382
Alignment:
Q  262 tcttgttataatacttttaatgttaaaaatatattaatcataagtattagtttat 316  Q
    ||||||||||||| | ||||  |||||||||||||||||||||||||||||||||    
T  36574436 tcttgttataatattcttaaaattaaaaatatattaatcataagtattagtttat 36574382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 3038933 - 3038872
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||| ||||    
T  3038933 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattttcta 3038872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 284 - 325
Target Start/End: Original strand, 7184236 - 7184277
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  7184236 ttaaaagtatattaatcataagtattagtttatcattctcta 7184277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 8410916 - 8410855
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||| ||||||||||||||    
T  8410916 ttgttataatattcttaaaattaaaagtatattaatcataagtattaatttatcattctcta 8410855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 8555762 - 8555701
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||| ||||||||||||||||||||    
T  8555762 ttgttataatattcttaaaattaaaagtatattaatcataaatattagtttatcattctcta 8555701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 8990949 - 8990888
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||| ||||    
T  8990949 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattttcta 8990888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 14008315 - 14008254
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  | |||| |||||||||||||||||||||||||||||||||||    
T  14008315 ttgttataatattcttaaaatcaaaagtatattaatcataagtattagtttatcattctcta 14008254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 16625790 - 16625729
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||| |||||||||||| ||||||||| ||| |||||||||||||||    
T  16625790 ttgttataatattcttaatattaaaaatatatgaatcataagcattggtttatcattctcta 16625729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 18826212 - 18826151
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| ||||||||||||||||||||||| |||||||||||    
T  18826212 ttgttataatattcttaaaattaaaagtatattaatcataagtattagttcatcattctcta 18826151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 38023433 - 38023372
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| ||||||||||||||| |||||||||||||||||||    
T  38023433 ttgttataatattcttaaaattaaaagtatattaatcataagaattagtttatcattctcta 38023372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 284 - 323
Target Start/End: Complemental strand, 5972362 - 5972323
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctc 323  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  5972362 ttaaaaatatattaatcataagtattaatttatcattctc 5972323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 264 - 323
Target Start/End: Complemental strand, 16519075 - 16519016
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctc 323  Q
    ||||||||||| | ||||| |||||||||||| ||||||||| |||||||||| ||||||    
T  16519075 ttgttataatattcttaatattaaaaatatatgaatcataagcattagtttatgattctc 16519016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 266 - 325
Target Start/End: Complemental strand, 25955818 - 25955759
Alignment:
Q  266 gttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||| | ||||  |||||| |||||||||||||||||||||||||||||| ||||    
T  25955818 gttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattatcta 25955759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 286 - 325
Target Start/End: Complemental strand, 26599219 - 26599180
Alignment:
Q  286 aaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  26599219 aaaaatatattaatcataagtattattttatcattctcta 26599180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 19382972 - 19383034
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattag-tttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| ||||||||||||||||||||| ||||||||||||||    
T  19382972 ttgttataatattcttaaaattaaaagtatattaatcataagtattagttttatcattctcta 19383034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 325
Target Start/End: Complemental strand, 30312386 - 30312352
Alignment:
Q  291 tatattaatcataagtattagtttatcattctcta 325  Q
    |||||||||||||||||||||||||||||||||||    
T  30312386 tatattaatcataagtattagtttatcattctcta 30312352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 284 - 322
Target Start/End: Original strand, 30523392 - 30523430
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattct 322  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  30523392 ttaaaaatatattaatcataagtattaatttatcattct 30523430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 284 - 325
Target Start/End: Original strand, 10165528 - 10165569
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||| ||||||||||||| |||||||||||||||||||||    
T  10165528 ttaaaagtatattaatcatacgtattagtttatcattctcta 10165569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 13767513 - 13767573
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  |||||||||||||||||||||  |||| ||||||||||||||    
T  13767513 ttgttataatatttttaaaattaaaaatatattaatcataaacatta-tttatcattctcta 13767573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 18780479 - 18780540
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||| |||||||||||| |||||||    
T  18780479 ttgttataatattattaaaattaaaagtatattaatcataaatattagtttatcgttctcta 18780540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 309
Target Start/End: Complemental strand, 26434492 - 26434447
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtatt 309  Q
    ||||||||||||||| || |||||||||||||||||||||| ||||    
T  26434492 ttgttataatactttcaaagttaaaaatatattaatcataaatatt 26434447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 29880859 - 29880920
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | | ||  |||||||||||||||||||||| ||| |||||||||||||||    
T  29880859 ttgttataatattatcaaaattaaaaatatattaatcataagcattcgtttatcattctcta 29880920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 284 - 325
Target Start/End: Complemental strand, 31550228 - 31550187
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||| |||||||||||||| ||||||||||||||||||||    
T  31550228 ttaaaagtatattaatcataactattagtttatcattctcta 31550187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 31899342 - 31899281
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||| ||||||||||||| ||||||    
T  31899342 ttgttataatattcttaaaattaaaagtatattaatcataactattagtttatcagtctcta 31899281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 284 - 325
Target Start/End: Original strand, 36030908 - 36030949
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||||||||||||||||| |||| ||||||||||||||    
T  36030908 ttaaaaatatattaatcataagcattaatttatcattctcta 36030949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 289 - 325
Target Start/End: Original strand, 1726020 - 1726056
Alignment:
Q  289 aatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||||||||||| ||||||||||||||||||||    
T  1726020 aatatattaatcataaatattagtttatcattctcta 1726056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 262 - 325
Target Start/End: Original strand, 4666228 - 4666291
Alignment:
Q  262 tcttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||||| | ||||  || ||||||||||||||||||| |||| ||||||| ||||||    
T  4666228 tcttgttataatattcttaaaatttaaaatatattaatcataagcattaatttatcactctcta 4666291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 325
Target Start/End: Original strand, 7310143 - 7310198
Alignment:
Q  270 taatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||| ||||||  ||||||||||||||||| ||||||||  ||||||||||||||    
T  7310143 taatatttttaaaattaaaaatatattaatcgtaagtatttatttatcattctcta 7310198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 270 - 325
Target Start/End: Original strand, 26427633 - 26427688
Alignment:
Q  270 taatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||| ||||||  |||||||||||||||||||||| |||| | ||||||||||||    
T  26427633 taatatttttaaaattaaaaatatattaatcataagcattaatatatcattctcta 26427688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 325
Target Start/End: Complemental strand, 30265343 - 30265284
Alignment:
Q  266 gttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||| | || | ||||||||||||||||||||||| |||| ||||| ||||||||    
T  30265343 gttataatattcttgaagttaaaaatatattaatcataagcattaatttattattctcta 30265284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 325
Target Start/End: Original strand, 38325201 - 38325260
Alignment:
Q  266 gttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||| | ||||| |||||||||||| ||||||||  |||| ||||||||||||||    
T  38325201 gttataatattattaatattaaaaatatatgaatcataatcattaatttatcattctcta 38325260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 314
Target Start/End: Complemental strand, 3119838 - 3119788
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagttt 314  Q
    ||||||||||| | ||||  |||||| ||||||||||||||||||||||||    
T  3119838 ttgttataatattcttaaaattaaaagtatattaatcataagtattagttt 3119788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 1270689 - 1270628
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||| || ||||||  ||||||||||| |||||||| | |||| ||||||||||||||    
T  1270689 ttgttatattatttttaaaattaaaaatatagtaatcatatgcattaatttatcattctcta 1270628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 325
Target Start/End: Original strand, 3022810 - 3022851
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||||||||||||||||  |||| ||||||||||||||    
T  3022810 ttaaaaatatattaatcataaacattaatttatcattctcta 3022851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 6584805 - 6584744
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  || ||||||||||||||||||  |||| ||||| ||||||||    
T  6584805 ttgttataatatttttaaaatttaaaatatattaatcataaaaattaatttatgattctcta 6584744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 21626220 - 21626281
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  ||||||||| | |||||||| | |||| ||||||||||||||    
T  21626220 ttgttataatatttttaaaattaaaaataaaataatcatatgcattaatttatcattctcta 21626281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 37194362 - 37194423
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  ||||||||| | |||||||| | |||| ||||||||||||||    
T  37194362 ttgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctcta 37194423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 325
Target Start/End: Original strand, 41503269 - 41503310
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||||||||||||||||  |||| ||||||||||||||    
T  41503269 ttaaaaatatattaatcataatcattaatttatcattctcta 41503310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 43572530 - 43572469
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  ||||||||| | |||||||| | |||| ||||||||||||||    
T  43572530 ttgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctcta 43572469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0952 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 3656 - 3595
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  3656 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 3595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0636 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0636
Description:

Target: scaffold0636; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 8486 - 8547
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  8486 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 8547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 35441 - 35380
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  35441 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 35380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 3404560 - 3404499
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  3404560 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 3404499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 33231033 - 33230972
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  33231033 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 33230972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 34349810 - 34349871
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  34349810 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 34349871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 36102876 - 36102815
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  36102876 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 36102815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 267 - 325
Target Start/End: Complemental strand, 37659514 - 37659456
Alignment:
Q  267 ttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  37659514 ttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 37659456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 284 - 325
Target Start/End: Complemental strand, 4734462 - 4734421
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||| |||||||||||||||||||||||||||||||||||    
T  4734462 ttaaaagtatattaatcataagtattagtttatcattctcta 4734421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 7079980 - 7079919
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  |||||||||||||||||||||| |||| ||||||| ||||||    
T  7079980 ttgttataatatttttaaaattaaaaatatattaatcataagcattaatttatcactctcta 7079919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 11877000 - 11876939
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  ||||||||||||||||||||||||||| ||||||| ||||||    
T  11877000 ttgttataatattcttaaacttaaaaatatattaatcataagtattaatttatcactctcta 11876939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 11892007 - 11891946
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  ||||||||||||||||||||||||||| ||||||| ||||||    
T  11892007 ttgttataatattcttaaacttaaaaatatattaatcataagtattaatttatcactctcta 11891946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 25033475 - 25033536
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||| ||||    
T  25033475 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattatcta 25033536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 29612086 - 29612147
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  ||||||||||||||||||||||||||| ||||||||| ||||    
T  29612086 ttgttataatattattaaaattaaaaatatattaatcataagtattaatttatcattgtcta 29612147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 265 - 326
Target Start/End: Original strand, 33896515 - 33896576
Alignment:
Q  265 tgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctctac 326  Q
    |||||||||||||| ||  |||||||||||||||||||  |||||| |||||||||||||||    
T  33896515 tgttataatactttcaaaattaaaaatatattaatcatttgtattaatttatcattctctac 33896576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 34272610 - 34272671
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||| ||||    
T  34272610 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattttcta 34272671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 39194026 - 39194087
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||| |||||||||||| ||||||||  |||||||||||||||||||    
T  39194026 ttgttataatattcttaatattaaaaatatatgaatcataaacattagtttatcattctcta 39194087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 320
Target Start/End: Original strand, 4137801 - 4137857
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcatt 320  Q
    |||| |||||| ||||||  ||||||||||||||||||||||||||| |||||||||    
T  4137801 ttgtaataatatttttaaaattaaaaatatattaatcataagtattaatttatcatt 4137857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 324
Target Start/End: Original strand, 36906302 - 36906342
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctct 324  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  36906302 ttaaaagtatattaatcataagtattagtttatcattctct 36906342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 326
Target Start/End: Original strand, 31149997 - 31150059
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctctac 326  Q
    ||||||||||| | ||||| |||||||||||| ||||||||  || |||||||||||||||||    
T  31149997 ttgttataatattcttaatattaaaaatatatgaatcataaacatcagtttatcattctctac 31150059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 284 - 325
Target Start/End: Original strand, 7300 - 7341
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||| ||||||||| |||||||||||||||||||||||||    
T  7300 ttaaaagtatattaattataagtattagtttatcattctcta 7341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 2474753 - 2474692
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||| ||||||||||||||||||||| ||||    
T  2474753 ttgttataatattcttaaaattaaaagtatattaaccataagtattagtttatcattatcta 2474692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 13865078 - 13865017
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||| ||||||||| ||||    
T  13865078 ttgttataatattcttaaaattaaaagtatattaatcataagtattaatttatcattttcta 13865017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 27085443 - 27085504
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| |||| |  |||||||||||||||||||||| |||| ||||||| ||||||    
T  27085443 ttgttataatattttttaaattaaaaatatattaatcataagcattaatttatcactctcta 27085504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 266 - 325
Target Start/End: Complemental strand, 11961505 - 11961446
Alignment:
Q  266 gttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||  |||||||||||||||| |||||||||| ||||||||| ||||    
T  11961505 gttataatactctgaaaattaaaaatatattaataataagtattaatttatcattttcta 11961446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 311
Target Start/End: Original strand, 41455354 - 41455401
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattag 311  Q
    ||||||||||| | ||||  ||||||||||||||||||||||||||||    
T  41455354 ttgttataatattcttaaaattaaaaatatattaatcataagtattag 41455401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 1942039 - 1941975
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagt---attagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| ||||||||||||||||   |||||||||||||||||||    
T  1942039 ttgttataatattcttaaaattaaaagtatattaatcataagtattattagtttatcattctcta 1941975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 266 - 324
Target Start/End: Original strand, 3394058 - 3394116
Alignment:
Q  266 gttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctct 324  Q
    ||||||||| ||||||  | |||||||||||||||||||  |||| |||||||||||||    
T  3394058 gttataatatttttaaaataaaaaatatattaatcataaacattaatttatcattctct 3394116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 271 - 325
Target Start/End: Original strand, 13258588 - 13258642
Alignment:
Q  271 aatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||| ||||  ||||||||||||||||| |||| |||| ||||||||||||||    
T  13258588 aatactcttaaaattaaaaatatattaatcgtaagcattaatttatcattctcta 13258642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 267 - 325
Target Start/End: Original strand, 13537440 - 13537498
Alignment:
Q  267 ttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||| | ||||  |||||||||||||||||||||| |||| ||||| ||||||||    
T  13537440 ttataatattcttaaaattaaaaatatattaatcataagcattaatttattattctcta 13537498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 267 - 325
Target Start/End: Original strand, 13626988 - 13627046
Alignment:
Q  267 ttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||| | ||||  |||||||||||||||||||||| |||| ||||| ||||||||    
T  13626988 ttataatattcttaaaattaaaaatatattaatcataagcattaatttattattctcta 13627046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 267 - 325
Target Start/End: Complemental strand, 31297331 - 31297273
Alignment:
Q  267 ttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||| | ||||  |||||| |||||||||||||| |||||||||||| |||||||    
T  31297331 ttataatattcttaaaattaaaagtatattaatcataaatattagtttatcgttctcta 31297273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 267 - 325
Target Start/End: Complemental strand, 34148562 - 34148505
Alignment:
Q  267 ttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||| | ||||  |||||| |||||||||||||||| ||||||||||||||||||    
T  34148562 ttataatattcttaaaattaaaagtatattaatcataagt-ttagtttatcattctcta 34148505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 284 - 322
Target Start/End: Original strand, 35353942 - 35353980
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattct 322  Q
    ||||||||||||||||||||| ||||| |||||||||||    
T  35353942 ttaaaaatatattaatcataaatattaatttatcattct 35353980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 1839806 - 1839745
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  ||||| |||||||||| ||| |||||| ||||||| ||||||    
T  1839806 ttgttataatatttttaaaattaaacatatattaatgatatgtattaatttatcactctcta 1839745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 292 - 325
Target Start/End: Complemental strand, 6839756 - 6839723
Alignment:
Q  292 atattaatcataagtattagtttatcattctcta 325  Q
    |||||||| |||||||||||||||||||||||||    
T  6839756 atattaataataagtattagtttatcattctcta 6839723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 8236104 - 8236043
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||   |||||||||| ||||||| ||||||  ||||||||||||||    
T  8236104 ttgttataatatttttaaaaataaaaatataataatcatgagtatttatttatcattctcta 8236043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 305
Target Start/End: Complemental strand, 9054497 - 9054456
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataag 305  Q
    ||||||||||| | |||| |||||||||||||||||||||||    
T  9054497 ttgttataatattcttaaagttaaaaatatattaatcataag 9054456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 325
Target Start/End: Complemental strand, 10605123 - 10605082
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||||||||||||| || || ||||||||||||||    
T  10605123 ttaaaaatatattaatcataaataataatttatcattctcta 10605082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 15108250 - 15108189
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  ||| || |||||||||||||||| ||| ||||||||||||||    
T  15108250 ttgttataatattcttaaaattataagtatattaatcataagtgttaatttatcattctcta 15108189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 305
Target Start/End: Original strand, 26042287 - 26042328
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataag 305  Q
    ||||||||||| ||||||  ||||||||||||||||||||||    
T  26042287 ttgttataatatttttaaaattaaaaatatattaatcataag 26042328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 29584269 - 29584330
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||| || ||||||  ||||||||||| |||||||| | |||| ||||||||||||||    
T  29584269 ttgttatattatttttaaaattaaaaatatagtaatcatatgcattaatttatcattctcta 29584330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 36837484 - 36837423
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  ||||||||| | |||||||| | |||| ||||||||||||||    
T  36837484 ttgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctcta 36837423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 284 - 325
Target Start/End: Complemental strand, 40985040 - 40984999
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||||||||||||||||  |||| ||||||||||||||    
T  40985040 ttaaaaatatattaatcataaacattaatttatcattctcta 40984999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 265 - 325
Target Start/End: Complemental strand, 1840192 - 1840132
Alignment:
Q  265 tgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||| || | ||||| ||||| |||||| ||||||||| ||| |||||||||||||||    
T  1840192 tgttatagtattcttaatattaaatatatatgaatcataagcattggtttatcattctcta 1840132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 264 - 304
Target Start/End: Complemental strand, 10878768 - 10878728
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataa 304  Q
    ||||||||||| ||||||  |||||||||||||||||||||    
T  10878768 ttgttataatatttttaaaattaaaaatatattaatcataa 10878728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 5825427 - 5825488
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  5825427 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 5825488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 24734975 - 24735036
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  24734975 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 24735036  T

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Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 26481117 - 26481056
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  26481117 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 26481056  T

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Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 26574381 - 26574320
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  26574381 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 26574320  T

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Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 34914722 - 34914783
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  34914722 ttgttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 34914783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 267 - 325
Target Start/End: Complemental strand, 29241816 - 29241758
Alignment:
Q  267 ttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||| | ||||  |||||| |||||||||||||||||||||||||||||||||||    
T  29241816 ttataatattcttaaaattaaaagtatattaatcataagtattagtttatcattctcta 29241758  T

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Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 1029388 - 1029449
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| ||||||||||| |||||||||||||||||||||||    
T  1029388 ttgttataatattcttaaaattaaaagtatattaatcacaagtattagtttatcattctcta 1029449  T

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Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 23095114 - 23095053
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||| |||||||||||||||||||| ||||||||||||||    
T  23095114 ttgttataatattcttaaaattaaaagtatattaatcataagtattattttatcattctcta 23095053  T

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Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 4465021 - 4465079
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattct 322  Q
    ||||||||||| ||||||  |||||||||||||||||||||  |||| |||||||||||    
T  4465021 ttgttataatatttttaaaattaaaaatatattaatcataaacattaatttatcattct 4465079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 6026266 - 6026324
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattct 322  Q
    ||||||||||| ||| || |||||||||| ||||||||||||||||  |||||||||||    
T  6026266 ttgttataatattttcaaagttaaaaatacattaatcataagtatttatttatcattct 6026324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 322
Target Start/End: Original strand, 26713948 - 26714006
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattct 322  Q
    |||||||| || | ||||| |||||||||||| ||||||||| ||||||||||||||||    
T  26713948 ttgttatattattcttaatattaaaaatatatgaatcataagcattagtttatcattct 26714006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 33212415 - 33212469
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatca 318  Q
    ||||||||||| | ||||  |||||||||||| ||||||||||||||||||||||    
T  33212415 ttgttataatattcttaaaattaaaaatatatgaatcataagtattagtttatca 33212469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 267 - 325
Target Start/End: Complemental strand, 34557155 - 34557098
Alignment:
Q  267 ttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||| |||||| |||||||||||||||||||||| ||||| |||| |||||||||    
T  34557155 ttataatatttttaaagttaaaaatatattaatcataa-tattaatttaccattctcta 34557098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 33677118 - 33677179
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| | ||||  |||||||||||||||||||||| |||| ||||||| ||||||    
T  33677118 ttgttataatattcttaaaattaaaaatatattaatcataagcattaatttatcactctcta 33677179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 264 - 324
Target Start/End: Complemental strand, 2502352 - 2502292
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctct 324  Q
    ||||||||||| | ||||  |||||||||||||||||||||| |||| ||||||| |||||    
T  2502352 ttgttataatattcttaaaattaaaaatatattaatcataagcattaatttatcactctct 2502292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 267 - 325
Target Start/End: Complemental strand, 8439378 - 8439320
Alignment:
Q  267 ttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||| | ||||  |||||||||||||||||||||  |||| ||||||||||||||    
T  8439378 ttataatattgttaaaattaaaaatatattaatcataaacattaatttatcattctcta 8439320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 326
Target Start/End: Original strand, 26289646 - 26289708
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctctac 326  Q
    |||||||| || ||||||  ||||||||||| |||||||| | |||| |||||||||||||||    
T  26289646 ttgttatattatttttaaaattaaaaatatagtaatcatatgcattaatttatcattctctac 26289708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 267 - 325
Target Start/End: Complemental strand, 33590312 - 33590254
Alignment:
Q  267 ttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||| ||||||  ||||||||||| |||||||| | |||| ||||||||||||||    
T  33590312 ttataatatttttaaaattaaaaatatagtaatcatatgcattaatttatcattctcta 33590254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 266 - 324
Target Start/End: Complemental strand, 33939107 - 33939049
Alignment:
Q  266 gttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctct 324  Q
    ||||||||| | ||||  |||||||||||||||||||||  |||| |||||||||||||    
T  33939107 gttataatattcttaaaattaaaaatatattaatcataaacattaatttatcattctct 33939049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 6687934 - 6687873
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||| || ||||||  ||||||||||| |||||||| | |||| ||||||||||||||    
T  6687934 ttgttatattatttttaaaattaaaaatatagtaatcatatgcattaatttatcattctcta 6687873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 12779608 - 12779669
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  ||||||||| | |||||||| | |||| ||||||||||||||    
T  12779608 ttgttataatatttttaaaattaaaaataaaataatcatatgcattaatttatcattctcta 12779669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 32549790 - 32549729
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  | ||||||||| ||||||||| ||||| ||||||||| ||||    
T  32549790 ttgttataatatttttaaaataaaaaatatagtaatcataaatattaatttatcattttcta 32549729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 32719285 - 32719224
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  ||||||||| | |||||||| | |||| ||||||||||||||    
T  32719285 ttgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctcta 32719224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 264 - 324
Target Start/End: Original strand, 19477351 - 19477411
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctct 324  Q
    ||||||||||| ||||||  ||||| ||||| |||||||| | |||| |||||||||||||    
T  19477351 ttgttataatatttttaaaattaaatatatagtaatcatatgcattaatttatcattctct 19477411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0927 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0927
Description:

Target: scaffold0927; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 264 - 324
Target Start/End: Complemental strand, 2896 - 2836
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctct 324  Q
    |||||| |||| | ||||| |||||||||||| ||||||||||||||||||||||||||||    
T  2896 ttgttacaatattcttaatattaaaaatatatgaatcataagtattagtttatcattctct 2836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 26475 - 26536
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  ||||||||| | |||||||| |||||| ||||||||||||||    
T  26475 ttgttataatatttttaaaattaaaaataaagtaatcatatgtattaatttatcattctcta 26536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0245 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 323
Target Start/End: Original strand, 4261 - 4300
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctc 323  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  4261 ttaaaaatatattaatcataagcattaatttatcattctc 4300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 284 - 323
Target Start/End: Original strand, 4592 - 4631
Alignment:
Q  284 ttaaaaatatattaatcataagtattagtttatcattctc 323  Q
    |||||||||||||||||||||| |||| ||||||||||||    
T  4592 ttaaaaatatattaatcataagcattaatttatcattctc 4631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 287 - 325
Target Start/End: Complemental strand, 68663 - 68625
Alignment:
Q  287 aaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||||||||||||||||||| ||||||||| ||||    
T  68663 aaaatatattaatcataagtattaatttatcattatcta 68625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 90871 - 90813
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattct 322  Q
    ||||||||||| ||||||  ||||||||||  |||||||||| |||| |||||||||||    
T  90871 ttgttataatatttttaaaattaaaaatattgtaatcataagcattaatttatcattct 90813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0648 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0648
Description:

Target: scaffold0648; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 7426 - 7369
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattc 321  Q
    ||||||||||| ||||||  |||||||||| ||| |||||||||||| |||| |||||    
T  7426 ttgttataatatttttaaaattaaaaatatgttattcataagtattaatttaccattc 7369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Complemental strand, 182 - 121
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    ||||||||||| ||||||  ||||||||| | |||||||| | |||| ||||||||||||||    
T  182 ttgttataatatttttaaaattaaaaataaagtaatcatatgcattaatttatcattctcta 121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 30548 - 30609
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||| || ||||||  ||||||||||| |||||||| | |||| ||||||||||||||    
T  30548 ttgttatattatttttaaaattaaaaatatagtaatcatatgcattaatttatcattctcta 30609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 325
Target Start/End: Original strand, 37216 - 37277
Alignment:
Q  264 ttgttataatacttttaatgttaaaaatatattaatcataagtattagtttatcattctcta 325  Q
    |||||||| || ||||||  ||||||||||| |||||||| | |||| ||||||||||||||    
T  37216 ttgttatattatttttaaaattaaaaatatagtaatcatatgcattaatttatcattctcta 37277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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