View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5192-Insertion-5 (Length: 593)

Name: NF5192-Insertion-5
Description: NF5192
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5192-Insertion-5
NF5192-Insertion-5
[»] chr1 (60 HSPs)
chr1 (15-586)||(2926119-2926684)
chr1 (145-359)||(2921019-2921233)
chr1 (393-576)||(9109421-9109604)
chr1 (415-569)||(47255349-47255503)
chr1 (415-557)||(22079322-22079464)
chr1 (436-576)||(6808479-6808619)
chr1 (421-569)||(47115183-47115331)
chr1 (423-571)||(20762686-20762833)
chr1 (421-554)||(13316376-13316508)
chr1 (415-560)||(13938143-13938287)
chr1 (415-554)||(31659243-31659382)
chr1 (514-569)||(28242408-28242463)
chr1 (457-540)||(37282729-37282812)
chr1 (457-571)||(50167183-50167295)
chr1 (429-554)||(4552661-4552785)
chr1 (421-554)||(11348710-11348842)
chr1 (457-554)||(19754543-19754639)
chr1 (457-554)||(28220250-28220346)
chr1 (415-554)||(37168302-37168442)
chr1 (415-554)||(834191-834330)
chr1 (415-554)||(8550811-8550950)
chr1 (415-554)||(13547113-13547252)
chr1 (415-554)||(13549024-13549163)
chr1 (415-569)||(37033081-37033236)
chr1 (457-569)||(42297984-42298095)
chr1 (413-559)||(41135824-41135968)
chr1 (457-571)||(31925715-31925827)
chr1 (457-571)||(49918398-49918510)
chr1 (457-554)||(3156913-3157009)
chr1 (507-552)||(13659362-13659407)
chr1 (457-554)||(28223445-28223541)
chr1 (457-554)||(28265578-28265674)
chr1 (415-538)||(30476486-30476609)
chr1 (514-554)||(46065022-46065062)
chr1 (301-352)||(2960893-2960944)
chr1 (457-571)||(7482238-7482351)
chr1 (507-554)||(44455257-44455304)
chr1 (291-345)||(2966013-2966067)
chr1 (457-555)||(13137999-13138096)
chr1 (415-539)||(16455627-16455750)
chr1 (415-571)||(29136252-29136408)
chr1 (457-569)||(2262983-2263095)
chr1 (507-554)||(1833619-1833666)
chr1 (507-554)||(3189427-3189474)
chr1 (507-554)||(3198244-3198291)
chr1 (507-554)||(3207083-3207130)
chr1 (420-534)||(3460706-3460821)
chr1 (457-541)||(10925271-10925357)
chr1 (374-571)||(34603541-34603737)
chr1 (507-554)||(36683777-36683824)
chr1 (507-546)||(37503589-37503628)
chr1 (507-554)||(45644378-45644425)
chr1 (457-539)||(19752734-19752815)
chr1 (458-576)||(44650165-44650282)
chr1 (457-538)||(193659-193739)
chr1 (514-551)||(8871089-8871126)
chr1 (459-528)||(32471510-32471579)
chr1 (429-541)||(37559905-37560017)
chr1 (415-555)||(41360919-41361059)
chr1 (507-551)||(51765494-51765538)
[»] chr2 (37 HSPs)
chr2 (392-569)||(30218053-30218230)
chr2 (457-569)||(24398105-24398217)
chr2 (374-569)||(33648135-33648331)
chr2 (415-554)||(45726934-45727073)
chr2 (415-554)||(36318033-36318172)
chr2 (423-554)||(6595030-6595160)
chr2 (457-576)||(28671978-28672097)
chr2 (415-540)||(5723294-5723418)
chr2 (415-554)||(723768-723907)
chr2 (423-554)||(4503157-4503286)
chr2 (424-554)||(30833360-30833490)
chr2 (415-554)||(1631756-1631895)
chr2 (415-554)||(17057393-17057532)
chr2 (415-554)||(17085376-17085515)
chr2 (415-554)||(35446908-35447047)
chr2 (415-554)||(42362357-42362496)
chr2 (423-554)||(45099769-45099898)
chr2 (424-554)||(4484354-4484484)
chr2 (468-554)||(36988100-36988185)
chr2 (457-554)||(2334442-2334538)
chr2 (507-571)||(17450675-17450737)
chr2 (415-554)||(29867874-29868013)
chr2 (415-541)||(11690506-11690632)
chr2 (507-554)||(34139794-34139841)
chr2 (507-554)||(39284933-39284980)
chr2 (421-554)||(36205689-36205820)
chr2 (418-554)||(11067313-11067449)
chr2 (429-554)||(11151615-11151739)
chr2 (457-554)||(17490172-17490268)
chr2 (509-554)||(42412117-42412161)
chr2 (514-554)||(14633849-14633889)
chr2 (415-546)||(38312245-38312376)
chr2 (415-560)||(42019888-42020035)
chr2 (507-554)||(26353281-26353328)
chr2 (457-571)||(33162458-33162570)
chr2 (457-546)||(36773610-36773698)
chr2 (457-554)||(42288135-42288230)
[»] chr8 (41 HSPs)
chr8 (415-554)||(34256531-34256669)
chr8 (442-576)||(7597647-7597781)
chr8 (415-554)||(34254355-34254493)
chr8 (423-554)||(17982667-17982797)
chr8 (459-560)||(32902191-32902292)
chr8 (415-554)||(42435015-42435154)
chr8 (457-560)||(11712018-11712121)
chr8 (423-554)||(31218271-31218401)
chr8 (423-554)||(42498208-42498338)
chr8 (382-546)||(5689244-5689407)
chr8 (457-554)||(40321128-40321224)
chr8 (423-554)||(1746243-1746372)
chr8 (415-554)||(15212791-15212930)
chr8 (442-569)||(29796329-29796457)
chr8 (416-546)||(30143346-30143476)
chr8 (415-552)||(40328784-40328922)
chr8 (468-554)||(33352209-33352294)
chr8 (415-554)||(27811283-27811422)
chr8 (415-554)||(40221750-40221889)
chr8 (507-554)||(4743238-4743285)
chr8 (423-554)||(12702658-12702788)
chr8 (468-554)||(1345395-1345480)
chr8 (504-554)||(4733800-4733850)
chr8 (508-554)||(10930223-10930269)
chr8 (457-554)||(4283572-4283668)
chr8 (415-527)||(11137031-11137146)
chr8 (457-554)||(18655448-18655544)
chr8 (457-554)||(44303903-44303999)
chr8 (415-554)||(3303694-3303833)
chr8 (507-554)||(2627833-2627880)
chr8 (507-554)||(8153855-8153902)
chr8 (504-554)||(3772286-3772336)
chr8 (468-546)||(4731717-4731794)
chr8 (457-554)||(19945383-19945480)
chr8 (469-554)||(3073898-3073981)
chr8 (429-554)||(4162517-4162640)
chr8 (457-554)||(18141868-18141964)
chr8 (415-555)||(19491722-19491862)
chr8 (504-541)||(30291701-30291738)
chr8 (415-554)||(8965715-8965854)
chr8 (457-541)||(41366651-41366734)
[»] chr4 (60 HSPs)
chr4 (379-576)||(22882754-22882949)
chr4 (379-576)||(22934418-22934613)
chr4 (358-586)||(33089826-33090054)
chr4 (415-571)||(12073397-12073553)
chr4 (468-571)||(12119598-12119700)
chr4 (421-554)||(56178661-56178793)
chr4 (429-569)||(379400-379539)
chr4 (415-554)||(27416989-27417128)
chr4 (415-540)||(40632450-40632575)
chr4 (415-567)||(46703505-46703658)
chr4 (429-554)||(8665428-8665552)
chr4 (415-554)||(9927482-9927621)
chr4 (457-569)||(26699451-26699563)
chr4 (457-569)||(2209761-2209873)
chr4 (415-551)||(52095389-52095525)
chr4 (382-554)||(6542203-6542376)
chr4 (457-569)||(50262710-50262821)
chr4 (415-576)||(37229724-37229885)
chr4 (419-546)||(37740635-37740761)
chr4 (423-554)||(48143057-48143187)
chr4 (468-554)||(26175660-26175745)
chr4 (458-556)||(33989893-33989991)
chr4 (430-567)||(34112838-34112973)
chr4 (415-552)||(34570440-34570577)
chr4 (457-554)||(41964463-41964560)
chr4 (457-571)||(50673855-50673967)
chr4 (421-541)||(4587970-4588090)
chr4 (457-554)||(12743949-12744045)
chr4 (457-554)||(12745338-12745434)
chr4 (415-554)||(12739574-12739713)
chr4 (415-554)||(26364241-26364380)
chr4 (463-554)||(5370107-5370197)
chr4 (457-552)||(5429727-5429821)
chr4 (507-554)||(29999830-29999877)
chr4 (468-559)||(37754979-37755070)
chr4 (507-554)||(47038435-47038482)
chr4 (417-554)||(5207866-5208003)
chr4 (415-536)||(24969117-24969238)
chr4 (457-554)||(6656004-6656100)
chr4 (457-538)||(12744087-12744167)
chr4 (457-554)||(36463413-36463509)
chr4 (457-554)||(48893662-48893758)
chr4 (415-554)||(5871825-5871964)
chr4 (458-554)||(8648188-8648283)
chr4 (507-571)||(13992300-13992364)
chr4 (457-569)||(21703845-21703956)
chr4 (415-554)||(35662446-35662585)
chr4 (457-541)||(36994572-36994655)
chr4 (514-554)||(41639530-41639570)
chr4 (415-541)||(12747793-12747919)
chr4 (457-540)||(54883068-54883150)
chr4 (507-541)||(3913545-3913579)
chr4 (468-538)||(12745476-12745545)
chr4 (429-539)||(29254514-29254623)
chr4 (424-498)||(34788854-34788928)
chr4 (468-554)||(51337123-51337208)
chr4 (429-554)||(52467378-52467502)
chr4 (424-537)||(6677482-6677597)
chr4 (422-498)||(44570445-44570521)
chr4 (415-566)||(44967841-44967992)
[»] chr5 (42 HSPs)
chr5 (424-586)||(316777-316938)
chr5 (418-559)||(3325922-3326063)
chr5 (415-554)||(25412766-25412904)
chr5 (457-554)||(28278364-28278460)
chr5 (457-554)||(37439189-37439285)
chr5 (415-554)||(213470-213609)
chr5 (415-554)||(13239756-13239895)
chr5 (415-554)||(16452085-16452224)
chr5 (415-554)||(33831685-33831824)
chr5 (423-569)||(13343075-13343219)
chr5 (514-569)||(27637622-27637677)
chr5 (416-569)||(10700659-10700809)
chr5 (457-554)||(30682946-30683044)
chr5 (421-554)||(30182600-30182732)
chr5 (415-554)||(28750679-28750818)
chr5 (415-546)||(38747010-38747141)
chr5 (415-554)||(40147266-40147405)
chr5 (514-569)||(4160703-4160758)
chr5 (429-576)||(10054818-10054964)
chr5 (416-554)||(13488209-13488347)
chr5 (415-554)||(16409480-16409619)
chr5 (429-588)||(33906021-33906179)
chr5 (457-554)||(32636872-32636968)
chr5 (457-554)||(42428454-42428550)
chr5 (423-554)||(36074067-36074196)
chr5 (457-552)||(9049368-9049462)
chr5 (415-541)||(39468586-39468712)
chr5 (457-554)||(533817-533913)
chr5 (457-554)||(538073-538169)
chr5 (468-568)||(30793195-30793293)
chr5 (507-571)||(8565954-8566017)
chr5 (514-554)||(16640964-16641004)
chr5 (514-554)||(19806467-19806507)
chr5 (458-554)||(42426259-42426354)
chr5 (507-554)||(5058142-5058189)
chr5 (507-554)||(9789248-9789295)
chr5 (507-554)||(26170859-26170906)
chr5 (507-554)||(26177979-26178026)
chr5 (504-554)||(3075682-3075732)
chr5 (457-550)||(42309963-42310055)
chr5 (423-586)||(14689421-14689581)
chr5 (430-498)||(35616190-35616258)
[»] chr6 (29 HSPs)
chr6 (415-554)||(5406224-5406362)
chr6 (415-554)||(5410549-5410687)
chr6 (392-539)||(25073551-25073698)
chr6 (415-551)||(31404702-31404837)
chr6 (415-554)||(5413418-5413556)
chr6 (382-552)||(4045396-4045566)
chr6 (415-565)||(22424839-22424990)
chr6 (415-554)||(2972963-2973102)
chr6 (415-554)||(21588936-21589075)
chr6 (415-554)||(21593669-21593808)
chr6 (415-554)||(26830147-26830286)
chr6 (430-569)||(5043648-5043786)
chr6 (514-569)||(26800691-26800746)
chr6 (423-554)||(30834560-30834690)
chr6 (415-571)||(3808715-3808872)
chr6 (421-554)||(2171556-2171687)
chr6 (457-554)||(28137432-28137528)
chr6 (423-549)||(33160381-33160506)
chr6 (507-571)||(26954294-26954357)
chr6 (507-554)||(5409093-5409140)
chr6 (423-554)||(16452353-16452483)
chr6 (415-537)||(17758028-17758150)
chr6 (458-540)||(9183069-9183150)
chr6 (517-554)||(33211209-33211246)
chr6 (507-554)||(6097475-6097522)
chr6 (507-554)||(16569119-16569166)
chr6 (457-554)||(603112-603208)
chr6 (514-554)||(3038927-3038967)
chr6 (507-571)||(17763087-17763151)
[»] scaffold0219 (1 HSPs)
scaffold0219 (443-576)||(27444-27577)
[»] chr3 (53 HSPs)
chr3 (415-554)||(45095169-45095307)
chr3 (470-569)||(55301981-55302079)
chr3 (423-573)||(46173371-46173519)
chr3 (429-567)||(46860494-46860631)
chr3 (415-569)||(4055773-4055926)
chr3 (415-571)||(30236130-30236285)
chr3 (374-567)||(35138717-35138909)
chr3 (392-576)||(20937639-20937822)
chr3 (415-569)||(29813068-29813221)
chr3 (382-554)||(7762238-7762409)
chr3 (421-554)||(23200162-23200294)
chr3 (421-554)||(37408470-37408602)
chr3 (457-554)||(40735431-40735527)
chr3 (415-554)||(19683913-19684052)
chr3 (430-554)||(29810889-29811012)
chr3 (464-554)||(6095623-6095712)
chr3 (424-554)||(7764479-7764608)
chr3 (421-554)||(23197963-23198095)
chr3 (457-554)||(54593752-54593848)
chr3 (415-554)||(760852-760991)
chr3 (415-554)||(34491217-34491356)
chr3 (457-569)||(4075480-4075592)
chr3 (423-554)||(5258168-5258298)
chr3 (415-540)||(22835040-22835165)
chr3 (507-569)||(43403753-43403815)
chr3 (429-554)||(9581302-9581426)
chr3 (507-552)||(16499126-16499171)
chr3 (457-554)||(44331593-44331689)
chr3 (457-569)||(49199478-49199590)
chr3 (382-554)||(51398787-51398958)
chr3 (415-569)||(43401810-43401965)
chr3 (415-550)||(53921531-53921666)
chr3 (423-538)||(5260363-5260477)
chr3 (514-569)||(41819532-41819587)
chr3 (458-541)||(44700515-44700597)
chr3 (457-575)||(32891152-32891268)
chr3 (396-567)||(26323082-26323255)
chr3 (457-554)||(29196410-29196506)
chr3 (514-554)||(40913397-40913437)
chr3 (516-559)||(5433901-5433944)
chr3 (507-554)||(7780028-7780075)
chr3 (415-541)||(29682364-29682490)
chr3 (507-554)||(39153385-39153432)
chr3 (507-554)||(40734595-40734642)
chr3 (507-554)||(47304348-47304395)
chr3 (468-554)||(9636150-9636235)
chr3 (509-554)||(2075099-2075144)
chr3 (507-552)||(4570049-4570094)
chr3 (507-560)||(33191928-33191980)
chr3 (415-554)||(5236481-5236619)
chr3 (430-498)||(8166536-8166604)
chr3 (514-554)||(27305734-27305774)
chr3 (454-554)||(31314490-31314589)
[»] chr7 (54 HSPs)
chr7 (392-541)||(5116587-5116736)
chr7 (457-569)||(22328399-22328511)
chr7 (415-554)||(48491584-48491723)
chr7 (415-569)||(3904626-3904780)
chr7 (418-576)||(4253531-4253689)
chr7 (507-569)||(8359325-8359387)
chr7 (421-554)||(35853926-35854058)
chr7 (423-554)||(23555054-23555184)
chr7 (457-554)||(3259043-3259139)
chr7 (421-554)||(14069857-14069989)
chr7 (421-554)||(14379885-14380017)
chr7 (457-554)||(29991101-29991197)
chr7 (457-554)||(32358078-32358174)
chr7 (415-554)||(18126649-18126788)
chr7 (415-554)||(22269978-22270117)
chr7 (415-554)||(27347822-27347961)
chr7 (415-554)||(48489436-48489575)
chr7 (416-554)||(6431977-6432115)
chr7 (457-554)||(19502226-19502322)
chr7 (457-554)||(30024756-30024852)
chr7 (421-554)||(41317458-41317590)
chr7 (458-554)||(8153391-8153486)
chr7 (392-569)||(26639303-26639484)
chr7 (415-554)||(41649035-41649173)
chr7 (415-554)||(43864249-43864388)
chr7 (457-541)||(47673980-47674063)
chr7 (415-541)||(4586166-4586292)
chr7 (415-541)||(26417321-26417447)
chr7 (507-554)||(34310740-34310787)
chr7 (415-554)||(39731374-39731513)
chr7 (457-571)||(2390330-2390442)
chr7 (468-554)||(23565085-23565170)
chr7 (504-569)||(18396412-18396477)
chr7 (415-554)||(25766984-25767124)
chr7 (415-554)||(2360996-2361135)
chr7 (415-554)||(29608742-29608881)
chr7 (502-554)||(30814528-30814580)
chr7 (415-550)||(31105421-31105556)
chr7 (507-554)||(496007-496054)
chr7 (507-554)||(24525526-24525573)
chr7 (507-554)||(25615950-25615997)
chr7 (424-495)||(43363556-43363627)
chr7 (421-554)||(4178786-4178917)
chr7 (415-552)||(4508732-4508869)
chr7 (513-571)||(12097875-12097932)
chr7 (515-576)||(31519007-31519068)
chr7 (468-554)||(31732993-31733078)
chr7 (382-535)||(36574558-36574710)
chr7 (457-554)||(1113705-1113801)
chr7 (392-498)||(1360230-1360338)
chr7 (457-538)||(6359992-6360072)
chr7 (507-540)||(48599372-48599405)
chr7 (507-571)||(36146416-36146479)
chr7 (458-554)||(47676160-47676255)
[»] scaffold0002 (1 HSPs)
scaffold0002 (421-554)||(434545-434677)
[»] scaffold1519 (1 HSPs)
scaffold1519 (423-554)||(930-1059)
[»] scaffold0286 (1 HSPs)
scaffold0286 (421-554)||(11569-11701)
[»] scaffold0016 (1 HSPs)
scaffold0016 (457-552)||(114650-114744)
[»] scaffold0236 (1 HSPs)
scaffold0236 (468-554)||(10548-10633)
[»] scaffold0006 (1 HSPs)
scaffold0006 (507-552)||(149123-149168)
[»] scaffold0466 (1 HSPs)
scaffold0466 (415-540)||(7332-7457)
[»] scaffold0176 (1 HSPs)
scaffold0176 (457-554)||(18028-18123)
[»] scaffold0066 (1 HSPs)
scaffold0066 (457-554)||(20439-20535)
[»] scaffold0053 (1 HSPs)
scaffold0053 (424-531)||(25068-25175)
[»] scaffold0491 (2 HSPs)
scaffold0491 (468-554)||(8759-8845)
scaffold0491 (468-554)||(11185-11271)
[»] scaffold0674 (1 HSPs)
scaffold0674 (514-554)||(3750-3790)


Alignment Details
Target: chr1 (Bit Score: 445; Significance: 0; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 445; E-Value: 0
Query Start/End: Original strand, 15 - 586
Target Start/End: Original strand, 2926119 - 2926684
Alignment:
Q  15 cccaaacaaagcctaaggcaaagtctcttgcgatcattgtctgactcatgtaaagtataagattgcttgcgatcagatcttacatgaagcctctcataca 114  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2926119 cccaaacaaaacataaggcaaagtctcttgcgatcattgtctgactcatgtaaagtataagattgcttgcgatcagatcttacatgaagcctctcataca 2926218  T
Q  115 ggaacactaatatatacactaaatccccctccccactctaagtaaaaccaagatttatgtgaggaaaaaattgtagcaggctagtgtactagattgacat 214  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2926219 ggaacactaatatatacactaaatccccctccccactctaagtaaaaccaagatttatgtgaggaaaaaattgtagcaggctagtgtactagattgacat 2926318  T
Q  215 attaaatatgatataatctcatatctaaaatagaggggtcaaaacgagagacaccattcnnnnnnnnnnnnnnnnntctaataatatattttccaccaaa 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                 ||||||||||||||||||||||||    
T  2926319 attaaatatgatataatctcatatctaaaatagaggggtcaaaacgagagacaccattcaaaaaataaatgaaaaatctaataatatattttccaccaaa 2926418  T
Q  315 agaacattttaaatgcttggtagatacaagctcaagtatatgcatagagttggaaaacacttgggaaagtgaaaagtattgagtgtcttatttatggaag 414  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||       
T  2926419 agaacattttaaatgcttggtagatacaagctcaagtatatgcatagagttggaaaacacttgggaaattgaaaattattgagtgtcttatttatgg--- 2926515  T
Q  415 gagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggt 514  Q
      |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  2926516 --gattggaaaaatggtagaaattaggtttgtgcttgaagaacttgttaaagttaatttattgtaacctttttgcatctctttgaaacgaattcattggt 2926613  T
Q  515 agtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaaacaattcttt 586  Q
    |||||||||||||||||||||||| |  |||||||||||||||||| |||||||||| | ||||||||||||    
T  2926614 agtggattggagagatcaatctcttctgcagagtaggtcattgttgcaccgaactaggt-aaacaattcttt 2926684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 145 - 359
Target Start/End: Original strand, 2921019 - 2921233
Alignment:
Q  145 ccccactctaagtaaaaccaagatttatgtgaggaaaaaattgtagcaggctagtgtactagattgacatattaaatatgatataatctcatatctaaaa 244  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2921019 ccccactctaagtaaaaccaagatttatgtgaggaaaaaattgtagcaggctagtgtactagattgacatattaaatatgatataatctcatatctaaaa 2921118  T
Q  245 tagaggggtcaaaacgagagacaccattcnnnnnnnnnnnnnnnnntctaataatatattttccaccaaaagaacattttaaatgcttggtagatacaag 344  Q
    ||||||| ||||||  | | |||||||||                 | |||||||||||||| ||||||||||||||| |||||| |||| |||||||||    
T  2921119 tagagggatcaaaatcaaacacaccattcaagaaataaataaaaaatttaataatatatttttcaccaaaagaacattataaatgtttggcagatacaag 2921218  T
Q  345 ctcaagtatatgcat 359  Q
    | |||||| ||||||    
T  2921219 cacaagtacatgcat 2921233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 393 - 576
Target Start/End: Complemental strand, 9109604 - 9109421
Alignment:
Q  393 ttgagtgtcttatttatggaaggagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatc 492  Q
    ||||||||||| || |||| |||||||||  ||||||| ||||||||  ||| | |||| ||| |||||| |||||||||| |||||||| ||||| |||    
T  9109604 ttgagtgtcttgttcatggtaggagattgagaaaatggaagaaattaagtttttacttggagaacttgttgaagttaatttcttgtaacccttttgtatc 9109505  T
Q  493 tctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaa 576  Q
    |||||| ||  ||  | ||| ||||| ||||||||||||||||||| ||| |||||| ||||| |||| ||| |||||| ||||    
T  9109504 tctttgtaaagaacacgttgatagtgtattggagagatcaatctcttccatagagtaagtcatcgttgaaccaaactaggtaaa 9109421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 415 - 569
Target Start/End: Complemental strand, 47255503 - 47255349
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||||||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | |||||     
T  47255503 gagattggaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattga 47255405  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaact 569  Q
    |||||||||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  47255404 tagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 47255349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 415 - 557
Target Start/End: Original strand, 22079322 - 22079464
Alignment:
Q  415 gagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggt 514  Q
    |||||||||||||||||||||||||  ||||| |||   || |||||||||| |||||| |||||||| ||||| ||||||||| ||  || |||||| |    
T  22079322 gagattggaaaaatggtagaaattatgtttgttctttgtgagcttgttaaagctaatttcttgtaaccattttgtatctctttgtaaagaactcattgat 22079421  T
Q  515 agtggattggagagatcaatctctcccacagagtaggtcattg 557  Q
    | |||||||||||||||||| |||||  || ||||||||||||    
T  22079422 attggattggagagatcaatttctcctccaaagtaggtcattg 22079464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 436 - 576
Target Start/End: Original strand, 6808479 - 6808619
Alignment:
Q  436 attagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatc 535  Q
    ||||| ||||| |||| ||| |||||| ||| ||| || |||||||  ||||| ||||||||| ||  || |||||  ||||||||||||||||||||||    
T  6808479 attaggtttgttcttggagagcttgttgaagctaacttcttgtaactcttttgtatctctttgtaaagaactcatttatagtggattggagagatcaatc 6808578  T
Q  536 tctcccacagagtaggtcattgttgtaccgaactagataaa 576  Q
    ||| || |||||||||| |||||||  ||||||||||||||    
T  6808579 tcttcctcagagtaggttattgttggtccgaactagataaa 6808619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 421 - 569
Target Start/End: Original strand, 47115183 - 47115331
Alignment:
Q  421 ggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacct-ttttgcatctctttgaaacaaattcattggtagtgg 519  Q
    |||||| |||||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  ||||| ||||||||| || |||  ||||| ||||||    
T  47115183 ggaaaattggtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccattttgtatctctttgtaa-aaacccattgatagtgg 47115281  T
Q  520 attggagagatcaatctctcccacagagtaggtcattgttgtaccgaact 569  Q
    ||||||||||||||||||| |  |||||||||||||||||| ||||||||    
T  47115282 attggagagatcaatctctgctccagagtaggtcattgttggaccgaact 47115331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 423 - 571
Target Start/End: Original strand, 20762686 - 20762833
Alignment:
Q  423 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 522  Q
    ||||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| ||||||| | || || | ||||| |||||||||    
T  20762686 aaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctcttcgtaagaact-cattgatagtggatt 20762784  T
Q  523 ggagagatcaatctctcccacagagtaggtcattgttgtaccgaactag 571  Q
    |||||||||||||||||| |||||||||||||   ||| ||||||||||    
T  20762785 ggagagatcaatctctcctacagagtaggtcaagtttggaccgaactag 20762833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 421 - 554
Target Start/End: Complemental strand, 13316508 - 13316376
Alignment:
Q  421 ggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtgga 520  Q
    ||||||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| ||||||||| || || | ||||| |||||||    
T  13316508 ggaaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttggaagaact-cattgatagtgga 13316410  T
Q  521 ttggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||| |||||||||||  ||||||||||||    
T  13316409 ttggagagttcaatctctcctccagagtaggtca 13316376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 415 - 560
Target Start/End: Original strand, 13938143 - 13938287
Alignment:
Q  415 gagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaaccttttt-gcatctctttgaaacaaattcattgg 513  Q
    |||||||| |||  |||||||||||| || || |||| ||| ||||| |||  |||||| ||||||||||||| | ||||||||| || ||| ||||||     
T  13938143 gagattgggaaatgggtagaaattaggtt-gttcttggagaacttgtaaaatataatttcttgtaaccttttttgtatctctttgtaagaaactcattga 13938241  T
Q  514 tagtggattggagagatcaatctctcccacaga-gtaggtcattgttg 560  Q
    ||||||||||||||||||  |||||||| |||| ||||||||||||||    
T  13938242 tagtggattggagagatc--tctctcccccagatgtaggtcattgttg 13938287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 415 - 554
Target Start/End: Original strand, 31659243 - 31659382
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||||||||||| ||||||||||   ||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || || ||||     
T  31659243 gagattggaaaaatgggtagaaattagggctgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaactt-attga 31659341  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  31659342 tagtggattggagagatcaatctctccctcagattaggtca 31659382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 514 - 569
Target Start/End: Original strand, 28242408 - 28242463
Alignment:
Q  514 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaact 569  Q
    |||||||||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  28242408 tagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 28242463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 457 - 540
Target Start/End: Complemental strand, 37282812 - 37282729
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcc 540  Q
    |||||| ||| |||||||| |||||| ||||||||||||||| ||  || ||||| |||||||||||||||||| |||||||||    
T  37282812 cttgttgaagctaatttatggtaacccttttgcatctctttgtaaagaactcattagtagtggattggagagataaatctctcc 37282729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 457 - 571
Target Start/End: Complemental strand, 50167295 - 50167183
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 556  Q
    ||||| |||| |||||| ||||||||  |||| ||||||||| || ||| |||||| |||||||||||||||||||||||||||| |||| ||| |||      
T  50167295 cttgtcaaagctaatttcttgtaacccatttgtatctctttgtaa-aaactcattgatagtggattggagagatcaatctctcccccagattagctca-a 50167198  T
Q  557 gttgtaccgaactag 571  Q
    |||| ||||||||||    
T  50167197 gttggaccgaactag 50167183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 429 - 554
Target Start/End: Complemental strand, 4552785 - 4552661
Alignment:
Q  429 ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagag 528  Q
    |||||||||||| ||||| |||   || |||||| ||| |||||| ||||||||  |||| ||| ||||| || || | ||||| || ||||||||||||    
T  4552785 ggtagaaattaggtttgtcctttgtgagcttgttgaagctaatttcttgtaacccctttgtatccctttgtaagaact-cattgataatggattggagag 4552687  T
Q  529 atcaatctctcccacagagtaggtca 554  Q
    ||||||||||||| ||||||||||||    
T  4552686 atcaatctctccctcagagtaggtca 4552661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 421 - 554
Target Start/End: Original strand, 11348710 - 11348842
Alignment:
Q  421 ggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtgga 520  Q
    |||||| |||||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||  || || | ||||| |||||||    
T  11348710 ggaaaattggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttctaagaact-cattgatagtgga 11348808  T
Q  521 ttggagagatcaatctctcccacagagtaggtca 554  Q
    ||||||||||||||||||||  ||||||||||||    
T  11348809 ttggagagatcaatctctcctccagagtaggtca 11348842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 457 - 554
Target Start/End: Original strand, 19754543 - 19754639
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||| |||| |||||||    
T  19754543 cttgttgaagctaatttcttgtaaccgatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctccctcagattaggtca 19754639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 457 - 554
Target Start/End: Complemental strand, 28220346 - 28220250
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||| |||| |||||||    
T  28220346 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcccccagattaggtca 28220250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 415 - 554
Target Start/End: Original strand, 37168302 - 37168442
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacct-ttttgcatctctttgaaacaaattcattg 512  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  ||||| ||||||||| || || | |||||    
T  37168302 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccattttgtatctctttgtaagaact-cattg 37168400  T
Q  513 gtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
     |||||||||||||||||||||||||||  ||||||||||||    
T  37168401 atagtggattggagagatcaatctctcctccagagtaggtca 37168442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 834330 - 834191
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||| ||||| || || | |||||     
T  834330 gagattgggaaaatggatagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttgtaagaact-cattga 834232  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||| ||||||||| ||||||||||||    
T  834231 tagtggattggagagatctatctctcccccagagtaggtca 834191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 8550950 - 8550811
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| |||||||||| ||||| |||   || |||||| ||| |||||| |||||||   |||| ||| ||||| || || | |||||     
T  8550950 gagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaactcatttgtatccctttgtaagaact-cattga 8550852  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  8550851 tagtggattggagagatcaatctctcctccagagtaggtca 8550811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 13547252 - 13547113
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| || ||| ||||||||  |||| ||||||||| || || | |||||     
T  13547252 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctattttcttgtaacccatttgtatctctttgtaagaact-cattga 13547154  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  13547153 tagtggattggagagatcaatctctcctccagagtaggtca 13547113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 13549163 - 13549024
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||||||  ||||||  |||||||  |||| ||||||||| || || | |||||     
T  13549163 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttaaacctaatttcatgtaacccatttgtatctctttgtaagaact-cattga 13549065  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  13549064 tagtggattggagagatcaatctctcctccagagtaggtca 13549024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 415 - 569
Target Start/End: Complemental strand, 37033236 - 37033081
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaa-cctttttgcatctctttgaaacaaattcattg 512  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| |||||| || ||||||||||||||| || || | |||||    
T  37033236 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaatccattttgcatctctttgtaagaact-cattg 37033138  T
Q  513 gtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaact 569  Q
     ||||||||||||||||| ||||||| |  || |||||||||| |||| ||||||||    
T  37033137 atagtggattggagagattaatctcttctccatagtaggtcatggttggaccgaact 37033081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 457 - 569
Target Start/End: Complemental strand, 42298095 - 42297984
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 556  Q
    |||||| ||| |||||| |||||||   |||| ||||||||| || || | ||||| |||||||||| ||||||||||||||||  |||||||||||||     
T  42298095 cttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaact-cattgatagtggattgaagagatcaatctctcctccagagtaggtcatg 42297997  T
Q  557 gttgtaccgaact 569  Q
    |||| ||||||||    
T  42297996 gttggaccgaact 42297984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 413 - 559
Target Start/End: Original strand, 41135824 - 41135968
Alignment:
Q  413 aggagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattg 512  Q
    |||||| | |||||| |||||||||||||||||| |||||||| ||| || |||||||||| |||||| | ||||| |||| |||| ||  || || |||    
T  41135824 aggagaatagaaaaagggtagaaattagatttgttcttgaagaactttttgaagttaatttcttgtaaaccttttgtatctatttgtaaagaactcgttg 41135923  T
Q  513 gtagtggattggagagatcaatctctcccacagagtaggtcattgtt 559  Q
     || || |   ||||||||  |||||||| |||||||||||||||||    
T  41135924 atactgaagcagagagatc--tctctccctcagagtaggtcattgtt 41135968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 457 - 571
Target Start/End: Complemental strand, 31925827 - 31925715
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 556  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||   |||||||||||      
T  31925827 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcctctagagtaggtca-a 31925730  T
Q  557 gttgtaccgaactag 571  Q
    |||| ||||||||||    
T  31925729 gttggaccgaactag 31925715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 457 - 571
Target Start/End: Original strand, 49918398 - 49918510
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 556  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||| || | |||||||      
T  49918398 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcccccaaattaggtca-a 49918495  T
Q  557 gttgtaccgaactag 571  Q
    |||| ||||||||||    
T  49918496 gttggaccgaactag 49918510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 457 - 554
Target Start/End: Original strand, 3156913 - 3157009
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||| || | |||||||    
T  3156913 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcccccatattaggtca 3157009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 507 - 552
Target Start/End: Complemental strand, 13659407 - 13659362
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggt 552  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||    
T  13659407 tcattgatagtggattggagagatcaatctctcccccagagtaggt 13659362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 457 - 554
Target Start/End: Complemental strand, 28223541 - 28223445
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||| || | |||||||    
T  28223541 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcccccatattaggtca 28223445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 457 - 554
Target Start/End: Complemental strand, 28265674 - 28265578
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | | ||| |||||||||||||||||||||||||||| |||| |||||||    
T  28265674 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-ctttgatagtggattggagagatcaatctctcccccagattaggtca 28265578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 538
Target Start/End: Complemental strand, 30476609 - 30476486
Alignment:
Q  415 gagattggaaaaat-ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||| ||||||||||||  |||| ||| | || |||||| ||| |||||||||||||||  |||| ||||||||| ||  || ||||||     
T  30476609 gagattgggaaaataggtagaaattagggttgttctttatgaacttgttgaagataatttattgtaacccatttgtatctctttgtaa-gaactcattga 30476511  T
Q  514 tagtggattggagagatcaatctct 538  Q
    || ||||||||| ||||||||||||    
T  30476510 tactggattggacagatcaatctct 30476486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 514 - 554
Target Start/End: Original strand, 46065022 - 46065062
Alignment:
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  46065022 tagtggattggagagatcaatctctcccccagagtaggtca 46065062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 301 - 352
Target Start/End: Original strand, 2960893 - 2960944
Alignment:
Q  301 tattttccaccaaaagaacattttaaatgcttggtagatacaagctcaagta 352  Q
    |||||| |||||||||||||||||||||||||| ||||||||| | ||||||    
T  2960893 tatttttcaccaaaagaacattttaaatgcttgatagatacaaacacaagta 2960944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 457 - 571
Target Start/End: Complemental strand, 7482351 - 7482238
Alignment:
Q  457 cttgttaaagttaatttattgtaacct-ttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcat 555  Q
    |||||| ||| |||||| ||||||||  ||||| ||||||||| || || | ||||| ||||| |||||||||||||||||||||  ||||||||||||     
T  7482351 cttgtttaagctaatttcttgtaacccattttgtatctctttgtaagaact-cattgatagtgaattggagagatcaatctctccttcagagtaggtca- 7482254  T
Q  556 tgttgtaccgaactag 571  Q
     |||| ||||||||||    
T  7482253 agttggaccgaactag 7482238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 507 - 554
Target Start/End: Original strand, 44455257 - 44455304
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| |||||||||||||||||||||||||||| |||| |||||||    
T  44455257 tcattgatagtggattggagagatcaatctctcccccagattaggtca 44455304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 291 - 345
Target Start/End: Complemental strand, 2966067 - 2966013
Alignment:
Q  291 tctaataatatattttccaccaaaagaacattttaaatgcttggtagatacaagc 345  Q
    |||||||| | ||||| ||| ||||||||||||||||||||||| ||||||||||    
T  2966067 tctaataagaaatttttcacaaaaagaacattttaaatgcttggcagatacaagc 2966013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 555
Target Start/End: Complemental strand, 13138096 - 13137999
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcat 555  Q
    |||||| ||| |||||| ||||||||  |||||||||||||| || ||   ||||| |||||||||| ||||| |||||||||||  ||||||||||||    
T  13138096 cttgttgaagctaatttcttgtaacccatttgcatctctttgtaagaaca-cattgatagtggattgaagagagcaatctctcccctagagtaggtcat 13137999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 415 - 539
Target Start/End: Original strand, 16455627 - 16455750
Alignment:
Q  415 gagattggaaaaatggt-agaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| |||||||| ||||||||||||| | || |  || |||||| ||| |||||| ||||||||  |||| |||||| || || || | |||||     
T  16455627 gagattggtaaaatggtgagaaattagattttttctagt-gagcttgttgaagctaatttcttgtaacccatttgtatctctgtgtaagaact-cattga 16455724  T
Q  514 tagtggattggagagatcaatctctc 539  Q
    ||||||||||||||||||||||||||    
T  16455725 tagtggattggagagatcaatctctc 16455750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 415 - 571
Target Start/End: Original strand, 29136252 - 29136408
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||| ||||  |||| || |||||| || || | |||||     
T  29136252 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttggaacccatttgtatttctttgtaagaact-cattga 29136350  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactag 571  Q
    | |||||||||||||||||||||||||  ||||||||||||   ||| ||||||||||    
T  29136351 tcgtggattggagagatcaatctctcctccagagtaggtcaagtttggaccgaactag 29136408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 457 - 569
Target Start/End: Complemental strand, 2263095 - 2262983
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 556  Q
    |||||| ||| |||||| |||||||| ||||  |||| |||| ||  || | |||| |||||||||| |||||||||||| ||||  || ||||||||||    
T  2263095 cttgttgaagataatttcttgtaacccttttatatctttttgtaaagaacttattgatagtggattgaagagatcaatctttcccttagggtaggtcatt 2262996  T
Q  557 gttgtaccgaact 569  Q
    ||||  |||||||    
T  2262995 gttggtccgaact 2262983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 554
Target Start/End: Original strand, 1833619 - 1833666
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| |||||||||||||||||||||||||||  |||| |||||||    
T  1833619 tcattgatagtggattggagagatcaatctctccaccagattaggtca 1833666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 554
Target Start/End: Original strand, 3189427 - 3189474
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||||||||||||||||||||||||||   ||||||||||||    
T  3189427 tcattgatagtggattggagagatcaatctctcatccagagtaggtca 3189474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 554
Target Start/End: Original strand, 3198244 - 3198291
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||||||||||||||||||||||||||   ||||||||||||    
T  3198244 tcattgatagtggattggagagatcaatctctcatccagagtaggtca 3198291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 554
Target Start/End: Original strand, 3207083 - 3207130
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||||||||||||||||||||||||||   ||||||||||||    
T  3207083 tcattgatagtggattggagagatcaatctctcatccagagtaggtca 3207130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 420 - 534
Target Start/End: Original strand, 3460706 - 3460821
Alignment:
Q  420 tggaaaaatggtagaaattaga-tttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtg 518  Q
    |||||||| ||||||||||||| ||||| |||   || |||||| ||| ||||||||||||||| ||||| || |||||| ||  ||   |||| ||||     
T  3460706 tggaaaaagggtagaaattagagtttgttctttgtgagcttgttgaagctaatttattgtaacccttttgtatatctttgtaaagaacatattgatagtc 3460805  T
Q  519 gattggagagatcaat 534  Q
    ||||||||||||||||    
T  3460806 gattggagagatcaat 3460821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 457 - 541
Target Start/End: Original strand, 10925271 - 10925357
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaa--attcattggtagtggattggagagatcaatctctccc 541  Q
    |||||| ||| |||||| |||||||   |||| ||||||||| || ||  |||||||| |||||||||||||| |||||||||||||    
T  10925271 cttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaagaattcattgatagtggattggagaaatcaatctctccc 10925357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 374 - 571
Target Start/End: Original strand, 34603541 - 34603737
Alignment:
Q  374 cttgggaaagtgaaaagtattgagtgtcttatttatggaaggagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatt 472  Q
    |||||||||||||||| |  |||||||||| || || |  | |||||| |||||||| ||||||||||  |||| |||   || |||||| ||| |||||    
T  34603541 cttgggaaagtgaaaattcatgagtgtcttgttcattggtg-agattgaaaaaatgggtagaaattagggttgttctttgtgagcttgtttaagctaatt 34603639  T
Q  473 tattgtaacct-ttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactag 571  Q
    | ||||||||  ||||  ||||||||| || || | ||||| | |||||||| ||||||||||||||||  ||||||||||||  |||| ||||||||||    
T  34603640 tcttgtaacccattttttatctctttgtaagaact-cattgatggtggattgaagagatcaatctctcctccagagtaggtca-agttggaccgaactag 34603737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 554
Target Start/End: Original strand, 36683777 - 36683824
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| |||||||||| ||| ||||||||||||| ||||||||||||    
T  36683777 tcattgatagtggattgtagaaatcaatctctcccccagagtaggtca 36683824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 546
Target Start/End: Complemental strand, 37503628 - 37503589
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacaga 546  Q
    |||||| |||||||||||||||||||||||||||| ||||    
T  37503628 tcattgatagtggattggagagatcaatctctcccccaga 37503589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 554
Target Start/End: Complemental strand, 45644425 - 45644378
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||||||||||||||||||||| |||||| |||| |||||||    
T  45644425 tcattgatagtggattggagagatcaatatctcccccagattaggtca 45644378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 457 - 539
Target Start/End: Original strand, 19752734 - 19752815
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctc 539  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| ||| ||||||||||||||||||||||    
T  19752734 cttgttgaagctaatttcttgtaaccgatttgtatctctttgtaagaact-cattgatagaggattggagagatcaatctctc 19752815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 458 - 576
Target Start/End: Complemental strand, 44650282 - 44650165
Alignment:
Q  458 ttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcattg 557  Q
    ||||||| | |||||||||||||   ||||  ||||||||| ||  ||||||||  |||||||||| |||||||||||||| ||  | ||||||||| |     
T  44650282 ttgttaacgctaatttattgtaaatcttttatatctctttgtaaataattcattaatagtggattgaagagatcaatctcttcccaaaagtaggtcaat- 44650184  T
Q  558 ttgtaccgaactagataaa 576  Q
    ||| |||||||||| ||||    
T  44650183 ttggaccgaactaggtaaa 44650165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 538
Target Start/End: Original strand, 193659 - 193739
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctct 538  Q
    |||||| ||| |||||| |||||||   |||| ||||||||| || || | ||||| |||||||||||||||||||||||||    
T  193659 cttgttgaagctaatttcttgtaactcatttgtatctctttgtaataact-cattgatagtggattggagagatcaatctct 193739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 514 - 551
Target Start/End: Complemental strand, 8871126 - 8871089
Alignment:
Q  514 tagtggattggagagatcaatctctcccacagagtagg 551  Q
    |||||||||||||||||||||||||||| || ||||||    
T  8871126 tagtggattggagagatcaatctctcccccatagtagg 8871089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 528
Target Start/End: Original strand, 32471510 - 32471579
Alignment:
Q  459 tgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagag 528  Q
    |||| |||||||||||||| |||  ||||| ||||||||| || ||| |||||| ||||||||| |||||    
T  32471510 tgttgaagttaatttattgcaactcttttgtatctctttgtaagaaactcattgatagtggattcgagag 32471579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 541
Target Start/End: Complemental strand, 37560017 - 37559905
Alignment:
Q  429 ggtagaaattagatttgtgcttgaagatcttgtt-aaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggaga 527  Q
    ||||||||||||| |||| |||   || |||||| |||| |||||| ||||||||  |||| ||||||||| || || | | ||| ||||| ||||||||    
T  37560017 ggtagaaattagagttgttctttgtgaacttgttgaaagctaatttcttgtaacccatttgtatctctttgtaagaact-cgttgatagtgaattggaga 37559919  T
Q  528 gatcaatctctccc 541  Q
    ||||||||||||||    
T  37559918 gatcaatctctccc 37559905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 555
Target Start/End: Original strand, 41360919 - 41361059
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| |||||||||| ||||| |||   || |||||| ||  |||||| ||||||||  |||| ||||||||| ||  || || |||     
T  41360919 gagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgttgaaactaatttcttgtaacccatttgtatctctttgtaa-gaactcgttga 41361017  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtcat 555  Q
    |||||||||  |||||||||| |||||| || ||||||||||    
T  41361018 tagtggattaaagagatcaatatctcccccatagtaggtcat 41361059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 507 - 551
Target Start/End: Original strand, 51765494 - 51765538
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtagg 551  Q
    |||||| ||||||||||||||| |||||||||||  |||||||||    
T  51765494 tcattgatagtggattggagagttcaatctctcctccagagtagg 51765538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 2e-26; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 392 - 569
Target Start/End: Complemental strand, 30218230 - 30218053
Alignment:
Q  392 attgagtgtcttatttatggaaggagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcat 491  Q
    |||||||||||| || ||||||||||||||  |||  ||||||| |||| ||||| |||| ||| ||| || ||| |||||| |||||||| ||||| ||    
T  30218230 attgagtgtcttgttcatggaaggagattgagaaatgggtagaagttaggtttgttcttggagagcttattgaagctaatttcttgtaaccattttgtat 30218131  T
Q  492 ctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaact 569  Q
    ||||||| ||  ||||||||| |||||| ||| | ||||||||| ||||| ||||||| |||||||||| || |||||    
T  30218130 ctctttgtaaataattcattgatagtgggttgaaaagatcaatcactcccccagagtaagtcattgttggactgaact 30218053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 457 - 569
Target Start/End: Original strand, 24398105 - 24398217
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 556  Q
    |||||| ||| |||||| |||||||| ||||| ||||||||| ||  || |||||| || ||||||||||||||||||||||||| || |||||||||||    
T  24398105 cttgttgaagctaatttcttgtaacccttttgtatctctttgtaaagaactcattgataatggattggagagatcaatctctcccccatagtaggtcatt 24398204  T
Q  557 gttgtaccgaact 569  Q
    |||| ||||||||    
T  24398205 gttggaccgaact 24398217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 374 - 569
Target Start/End: Original strand, 33648135 - 33648331
Alignment:
Q  374 cttgggaaagtgaaaagtattgagtgtcttatttatggaaggagattggaaaaatggtagaaattaga-tttgtgcttgaagatcttgttaaagttaatt 472  Q
    ||||||| ||||||||  |||||||||||| |  |||  |||||||||  ||||||||| |||||||  ||||| |||   || |||||| ||| |||||    
T  33648135 cttgggagagtgaaaataattgagtgtcttgtacatgagaggagattgagaaaatggtaaaaattagggtttgttctttgtgagcttgttgaagctaatt 33648234  T
Q  473 tattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaact 569  Q
    |  ||||||| ||||| || |||||| ||  || |||||| ||| |||||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  33648235 tcctgtaacccttttgtatttctttgtaaagaactcattgatagcggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 33648331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 415 - 554
Target Start/End: Original strand, 45726934 - 45727073
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||| |||| |||   || |||||| ||| |||||| ||||||||| |||| ||||||||| || || | |||||     
T  45726934 gagattgggaaaatgggtagaaattagagttgttctttgtgagcttgttgaagctaatttcttgtaacctatttgtatctctttgtaagaact-cattga 45727032  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  45727033 tagtggattggagagatcaatctctcctccagagtaggtca 45727073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 36318172 - 36318033
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||||||||||| ||||||||||  |||| |||   || |||||| ||  |||||||||||||||  |||| ||||||||| || || | |||||     
T  36318172 gagattggaaaaatgggtagaaattagggttgttctttgtgagcttgttgaaactaatttattgtaacccatttgtatctctttgtaagaact-cattga 36318074  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||||||||||||||||||||||||||  |||||||||||    
T  36318073 tagtggattggagagatcaatctctcccttagagtaggtca 36318033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 423 - 554
Target Start/End: Complemental strand, 6595160 - 6595030
Alignment:
Q  423 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 522  Q
    ||||||||||||||||||  |||| |||   || |||||| ||| |||||| |||||||| ||||| ||||||||| || || | | ||| |||||||||    
T  6595160 aaaaatggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgaatctctttgtaagaact-cgttgatagtggatt 6595062  T
Q  523 ggagagatcaatctctcccacagagtaggtca 554  Q
    ||||||||||||||||||  ||||||||||||    
T  6595061 ggagagatcaatctctcctccagagtaggtca 6595030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 457 - 576
Target Start/End: Original strand, 28671978 - 28672097
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 556  Q
    |||||||| |||||||| |||| ||| ||||| ||||||||  ||  || ||| ||  ||||||||||||||||||||||||||  ||||||||||||||    
T  28671978 cttgttaaggttaatttcttgttaccgttttgtatctctttacaaagaactcactgacagtggattggagagatcaatctctcctccagagtaggtcatt 28672077  T
Q  557 gttgtaccgaactagataaa 576  Q
    |||| |||||| ||| ||||    
T  28672078 gttggaccgaattaggtaaa 28672097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 415 - 540
Target Start/End: Complemental strand, 5723418 - 5723294
Alignment:
Q  415 gagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggt 514  Q
    |||||||  |||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||||||||| ||||||||| || || | ||||| |    
T  5723418 gagattgagaaaagggtagaaattaggcttgttctttgtgaacttgtcaaagctaatttcttgtaacctttttgtatctctttgtaagaact-cattgat 5723320  T
Q  515 agtggattggagagatcaatctctcc 540  Q
    ||||||||||||||||||||||||||    
T  5723319 agtggattggagagatcaatctctcc 5723294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 723907 - 723768
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||||||| ||| |||||||||| ||||| |||   || |||||| ||| |||||| ||||||||  |||| ||| ||||| || || | |||||     
T  723907 gagattggaaaactgggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttgtaagaact-cattga 723809  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  723808 tagtggattggagagatcaatctctcccccagattaggtca 723768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 423 - 554
Target Start/End: Complemental strand, 4503286 - 4503157
Alignment:
Q  423 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 522  Q
    ||||||||||||||||||  |||| |||   || ||||| |||| |||||| |||||||  ||||| |||||||||||   || |||||| |||||||||    
T  4503286 aaaaatggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaactcttttgtatctctttgaag--aactcattgatagtggatt 4503189  T
Q  523 ggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| |||||||||||  ||||||||||||    
T  4503188 ggagagttcaatctctcctccagagtaggtca 4503157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 424 - 554
Target Start/End: Original strand, 30833360 - 30833490
Alignment:
Q  424 aaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattg 523  Q
    |||| ||||||||||||  |||| |||   || ||||| ||||||||||| |||||||| ||||| ||||||||   |  || |||||| ||||||||||    
T  30833360 aaaagggtagaaattagggttgttctttgtgaacttgtcaaagttaatttcttgtaacccttttgtatctcttttgtaagaactcattgatagtggattg 30833459  T
Q  524 gagagatcaatctctcccacagagtaggtca 554  Q
    ||||| |||||||||||  ||||||||||||    
T  30833460 gagagttcaatctctcctccagagtaggtca 30833490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 1631895 - 1631756
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||||||||||| ||||||||||  |||| |||   || |||||| ||| |||| | ||||||||  |||| ||||||||| || || | |||||     
T  1631895 gagattggaaaaatgggtagaaattaggattgttctttgtgagcttgttgaagctaatatcttgtaacccatttgtatctctttgtaagaact-cattga 1631797  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||| ||||||||||||  ||||||||||||    
T  1631796 tagtggattggagaaatcaatctctcctccagagtaggtca 1631756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 17057532 - 17057393
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||||||||||| ||||||||||  |||| |||    | |||||| ||| |||||| |||||||   |||| ||||||||| || || | |||||     
T  17057532 gagattggaaaaatgggtagaaattagggttgttctttgcaagcttgttgaagctaattttttgtaactcatttgtatctctttgtaagaact-cattga 17057434  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  17057433 tagtggattggagagatcaatctctcccccagactaggtca 17057393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 17085515 - 17085376
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||||||||||| ||||||||||  |||| |||    | |||||| ||| |||||| |||||||   |||| ||||||||| || || | |||||     
T  17085515 gagattggaaaaatgggtagaaattagggttgttctttgcaagcttgttgaagctaattttttgtaactcatttgtatctctttgtaagaact-cattga 17085417  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  17085416 tagtggattggagagatcaatctctcccccagactaggtca 17085376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 35447047 - 35446908
Alignment:
Q  415 gagattggaaaaat-ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||| ||||||||||||  |||| |||   ||||||||| ||  |||||| ||||||||  |||| ||||||||| || || | |||||     
T  35447047 gagattggtaaaattggtagaaattagggttgttctttgtgatcttgttgaatctaatttcttgtaacccatttgtatctctttgtaagaact-cattga 35446949  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||||||||||||||||| |||||||  ||||||||||||    
T  35446948 tagtggattggagagatcactctctcctccagagtaggtca 35446908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 415 - 554
Target Start/End: Original strand, 42362357 - 42362496
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| |||||||||| ||||| |||   || |||||| ||| |||||| ||||||||  |||| ||| ||||| || || | |||||     
T  42362357 gagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttgtaagaact-cattga 42362455  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||| ||||||||| |||| |||||||    
T  42362456 tagtggattggagagatctatctctcccccagattaggtca 42362496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 423 - 554
Target Start/End: Original strand, 45099769 - 45099898
Alignment:
Q  423 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 522  Q
    ||||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||  ||||| |||||||||||   || |||||| |||||||||    
T  45099769 aaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaactcttttgtatctctttgaag--aactcattgatagtggatt 45099866  T
Q  523 ggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| |||||||||||  ||||||||||||    
T  45099867 ggagagttcaatctctcctccagagtaggtca 45099898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 424 - 554
Target Start/End: Complemental strand, 4484484 - 4484354
Alignment:
Q  424 aaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattg 523  Q
    |||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| ||||||||   |  || |||||| ||||||||||    
T  4484484 aaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctcttttgtaagaactcattgatagtggattg 4484385  T
Q  524 gagagatcaatctctcccacagagtaggtca 554  Q
    ||||| |||||||||||  ||||||||||||    
T  4484384 gagagttcaatctctcctccagagtaggtca 4484354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 468 - 554
Target Start/End: Complemental strand, 36988185 - 36988100
Alignment:
Q  468 taatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| |||||||  ||||| ||||||||| || || | ||||| |||||||||||||||||||||||||||  ||||||||||||    
T  36988185 taatttcttgtaactcttttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcctccagagtaggtca 36988100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 457 - 554
Target Start/End: Complemental strand, 2334538 - 2334442
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||| |||||| | |||||  ||||| ||||||||| || || | ||||| |||||||||||||||||||||||||||  ||||||||||||    
T  2334538 cttgttgaagctaatttctagtaactcttttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcctccagagtaggtca 2334442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 507 - 571
Target Start/End: Original strand, 17450675 - 17450737
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactag 571  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||||  |||| ||||||||||    
T  17450675 tcattgatagtggattggagagatcaatctct-ccacagagtaggtca-agttggaccgaactag 17450737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 554
Target Start/End: Original strand, 29867874 - 29868013
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||  |||| |||   || ||||| |||| |||||| ||||||||  |||| ||||||||| || || | | |||     
T  29867874 gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctctttgtaagaact-ctttga 29867972  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||| || | |||||||    
T  29867973 tagtggattggagagatcaatctctcccccaaattaggtca 29868013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 415 - 541
Target Start/End: Original strand, 11690506 - 11690632
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| |||||||||| ||||| |||   || |||||| ||| |||||| ||||||||  |||| ||| ||||| || |||| | |||     
T  11690506 gagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttgtaagaaat-cgttga 11690604  T
Q  514 tagtggattggagagatcaatctctccc 541  Q
    |||||||||||||||||||| |||||||    
T  11690605 tagtggattggagagatcaacctctccc 11690632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 507 - 554
Target Start/End: Complemental strand, 34139841 - 34139794
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| |||||||||||||||||||||||||||| |||| |||||||    
T  34139841 tcattgatagtggattggagagatcaatctctcccccagattaggtca 34139794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 507 - 554
Target Start/End: Original strand, 39284933 - 39284980
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| |||||||||||||||||||||||||||| |||| |||||||    
T  39284933 tcattgatagtggattggagagatcaatctctcccccagattaggtca 39284980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 421 - 554
Target Start/End: Complemental strand, 36205820 - 36205689
Alignment:
Q  421 ggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtgga 520  Q
    ||||||||||||||||||||  |||| |||   || ||||| |||| |||||| |||||||  ||||| |||||||||||   || ||||||  || |||    
T  36205820 ggaaaaatggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaactcttttgtatctctttgaag--aactcattgacagcgga 36205723  T
Q  521 ttggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||| ||||||| |||  ||||||||||||    
T  36205722 ttggagagttcaatctatcctccagagtaggtca 36205689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 418 - 554
Target Start/End: Original strand, 11067313 - 11067449
Alignment:
Q  418 attggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtag 516  Q
    ||||||||||||| ||||||||||  |||| |||   || ||||| |||| |||||| ||||||||  |||| ||||||||| || || | ||||  ||     
T  11067313 attggaaaaatgggtagaaattagtgttgtactttgtgagcttgtcaaagctaatttcttgtaacccatttgtatctctttgtaagaact-catttataa 11067411  T
Q  517 tggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||||| ||||||||||||||||| |||| |||||||    
T  11067412 tggattgaagagatcaatctctcccccagattaggtca 11067449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 429 - 554
Target Start/End: Complemental strand, 11151739 - 11151615
Alignment:
Q  429 ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagag 528  Q
    |||||||||||||||||| |||   || |||||| ||| |||||| ||||||||  |||| ||| ||||| || || | | | | |||||||||||||||    
T  11151739 ggtagaaattagatttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatcactttgtaagaact-cttagatagtggattggagag 11151641  T
Q  529 atcaatctctcccacagagtaggtca 554  Q
    ||||| ||||||| |||| |||||||    
T  11151640 atcaacctctcccccagattaggtca 11151615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 457 - 554
Target Start/End: Complemental strand, 17490268 - 17490172
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||| |||||| |||||||  ||||| | ||||||| || || | ||||| |||||||||| |||||||||||||||||  |||||||||||    
T  17490268 cttgttgaagctaatttcttgtaactcttttgtaactctttgtaagaact-cattgatagtggattgtagagatcaatctctcccctagagtaggtca 17490172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 509 - 554
Target Start/End: Original strand, 42412117 - 42412161
Alignment:
Q  509 attggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||| |||||||||||||||||||||||||||| ||||||||||||    
T  42412117 attgatagtggattggagagatcaatctctccc-cagagtaggtca 42412161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 514 - 554
Target Start/End: Complemental strand, 14633889 - 14633849
Alignment:
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  14633889 tagtggattggagagatcaatctctcccccagattaggtca 14633849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 546
Target Start/End: Original strand, 38312245 - 38312376
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||  |||||| ||||||||  |||| ||||||||| || |  | |||||     
T  38312245 gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaaactaatttcttgtaacccatttgtatctctttgtaagatct-cattga 38312343  T
Q  514 tagtggattggagagatcaatctctcccacaga 546  Q
    |||||||||||||||||||||||||||| ||||    
T  38312344 tagtggattggagagatcaatctctcccccaga 38312376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 560
Target Start/End: Complemental strand, 42020035 - 42019888
Alignment:
Q  415 gagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttg--aaacaaattcattg 512  Q
    |||||| |||||| ||||||| |||  ||||| |||  | | |||||  ||| |||||| |||||||  ||||| |||||||||  ||| ||| ||||||    
T  42020035 gagattagaaaaagggtagaatttatgtttgttcttataaagcttgtagaagctaatttcttgtaactcttttgtatctctttgtaaaaaaaactcattg 42019936  T
Q  513 gtagtggattggagagatcaatctctcccacagagtaggtcattgttg 560  Q
     ||||| ||| ||||||||||||||| || || ||||||| |||||||    
T  42019935 atagtgaatttgagagatcaatctcttccccatagtaggttattgttg 42019888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 554
Target Start/End: Original strand, 26353281 - 26353328
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||||||||||||||||||| ||||||||  |||||||||||    
T  26353281 tcattgatagtggattggagagatcactctctcccttagagtaggtca 26353328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 457 - 571
Target Start/End: Complemental strand, 33162570 - 33162458
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 556  Q
    |||||| ||| |||||| ||||||||  |||| |||||| || || || | ||||| ||||||||| ||||||||||||||||||  ||| |||||||      
T  33162570 cttgttgaagctaatttcttgtaacccatttgtatctctctgtaagaact-cattgatagtggattagagagatcaatctctcccctagattaggtca-a 33162473  T
Q  557 gttgtaccgaactag 571  Q
    |||| ||||||||||    
T  33162472 gttggaccgaactag 33162458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 546
Target Start/End: Original strand, 36773610 - 36773698
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacaga 546  Q
    |||||| ||| |||||| |||||||   |||| ||||||||| || || | | ||| |||||||||||||||||||||||||||| ||||    
T  36773610 cttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaact-ctttgatagtggattggagagatcaatctctcccccaga 36773698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 554
Target Start/End: Complemental strand, 42288230 - 42288135
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||| |||||||||||||||  |||| || |||||| ||  |  |||||| || ||||||||||||||||||||||||| |||| |||||||    
T  42288230 cttgttgaagctaatttattgtaacccatttgtatttctttgtaa-gagctcattgataatggattggagagatcaatctctccc-cagattaggtca 42288135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 3e-25; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 34256669 - 34256531
Alignment:
Q  415 gagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggt 514  Q
    ||||||||||||||||||||||||||  |||| |||   || ||||| ||||||||||| |||||||| ||||| ||||||||| || || | ||||| |    
T  34256669 gagattggaaaaatggtagaaattagggttgttctttgtgaacttgtcaaagttaatttcttgtaacccttttgtatctctttgtaagaact-cattgat 34256571  T
Q  515 agtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||||||||||||||||||||||||   |||||||||||    
T  34256570 agtggattggagagatcaatctctcctctagagtaggtca 34256531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 442 - 576
Target Start/End: Original strand, 7597647 - 7597781
Alignment:
Q  442 tttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctccc 541  Q
    ||||| |||| ||| |||||| ||| |||||| || ||| | ||||| ||||||||| ||  ||| ||||| ||||||||||||||||||||||||||||    
T  7597647 tttgttcttggagagcttgttgaagctaatttcttataatccttttgtatctctttgtaaagaatgcattgatagtggattggagagatcaatctctccc 7597746  T
Q  542 acagagtaggtcattgttgtaccgaactagataaa 576  Q
     || ||||||||||||||  |||||||| ||||||    
T  7597747 ccatagtaggtcattgttagaccgaactggataaa 7597781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 34254493 - 34254355
Alignment:
Q  415 gagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggt 514  Q
    |||||||| |||| ||||||||||||  |||| |||   || ||||| ||||||||||| |||||||| ||||| ||||||||| || || || |||| |    
T  34254493 gagattgggaaaagggtagaaattagggttgttctttgtgaacttgtcaaagttaatttcttgtaacccttttgtatctctttgtaagaactt-attgat 34254395  T
Q  515 agtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||||||||||||||||||||||||   |||||||||||    
T  34254394 agtggattggagagatcaatctctcctctagagtaggtca 34254355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 423 - 554
Target Start/End: Original strand, 17982667 - 17982797
Alignment:
Q  423 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 522  Q
    ||||| ||||||||||||  |||| |||   || ||||| ||||||||||| |||||||| ||||| ||||||||| || || | ||||| |||||||||    
T  17982667 aaaaagggtagaaattagggttgttctttgtgaacttgtcaaagttaatttcttgtaacccttttgtatctctttggaagaact-cattgatagtggatt 17982765  T
Q  523 ggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| |||||||||||  ||||||||||||    
T  17982766 ggagagttcaatctctcctccagagtaggtca 17982797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 459 - 560
Target Start/End: Complemental strand, 32902292 - 32902191
Alignment:
Q  459 tgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcattgt 558  Q
    |||| ||| |||||| ||||||| |||||| ||||||||  ||  ||||||||| ||||| ||| |||||||||||||||||| | ||||||||||||||    
T  32902292 tgttgaagctaatttcttgtaacttttttgtatctctttctaaagaattcattgatagtgaatttgagagatcaatctctccccctgagtaggtcattgt 32902193  T
Q  559 tg 560  Q
    ||    
T  32902192 tg 32902191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 42435154 - 42435015
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||||||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | |||||     
T  42435154 gagattggaaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattga 42435056  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||| ||||||||||||  ||||||||||||    
T  42435055 tagtggattggagaaatcaatctctcctccagagtaggtca 42435015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 457 - 560
Target Start/End: Complemental strand, 11712121 - 11712018
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 556  Q
    |||||| ||| |||||| ||| |||| ||||  ||||||||| ||  || |||||| |||||||||| ||||||||||||||||| || |||||||||||    
T  11712121 cttgttgaagctaatttcttgaaacccttttatatctctttgtaaataactcattgatagtggattgaagagatcaatctctccctcaaagtaggtcatt 11712022  T
Q  557 gttg 560  Q
    ||||    
T  11712021 gttg 11712018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 423 - 554
Target Start/End: Original strand, 31218271 - 31218401
Alignment:
Q  423 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 522  Q
    ||||||||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| ||||||||| || || | ||||| |||||||||    
T  31218271 aaaaatggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttggaagaact-cattgatagtggatt 31218369  T
Q  523 ggagagatcaatctctcccacagagtaggtca 554  Q
     ||||| |||||||||||  ||||||||||||    
T  31218370 agagagttcaatctctcctccagagtaggtca 31218401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 423 - 554
Target Start/End: Original strand, 42498208 - 42498338
Alignment:
Q  423 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 522  Q
    ||||| ||||||||||||  |||| |||   || |||||| ||| |||||| |||||||| ||||| || |||||| || || | ||||| |||||||||    
T  42498208 aaaaaaggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgtatttctttgtaagaact-cattgatagtggatt 42498306  T
Q  523 ggagagatcaatctctcccacagagtaggtca 554  Q
    ||||||||||||||||||  ||||||||||||    
T  42498307 ggagagatcaatctctcctccagagtaggtca 42498338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 546
Target Start/End: Original strand, 5689244 - 5689407
Alignment:
Q  382 agtgaaaagtattgagtgtcttatttatggaaggagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaa 480  Q
    ||||||||  |||||||||||| || ||  || |||||||||||||||| |||||||||   | ||||||   || ||||| |||| |||||| ||||||    
T  5689244 agtgaaaatcattgagtgtcttgttcatt-aatgagattggaaaaatgggtagaaattaaggtggtgctttgtgagcttgtcaaagctaatttcttgtaa 5689342  T
Q  481 cctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacaga 546  Q
    ||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||| ||||    
T  5689343 cccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcccccaga 5689407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 457 - 554
Target Start/End: Original strand, 40321128 - 40321224
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| |||||||||| ||||||||  || | ||||||||| || ||| || ||| |||||||||||||||||||||||||||| |||| |||||||    
T  40321128 cttgttgaagttaatttcttgtaacccattagtatctctttgtaa-aaactctttgatagtggattggagagatcaatctctcccccagattaggtca 40321224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 423 - 554
Target Start/End: Complemental strand, 1746372 - 1746243
Alignment:
Q  423 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 522  Q
    ||||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| |||||||||||   || |||||| |||||||||    
T  1746372 aaaaaaggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgaag--aactcattgatagtggatt 1746275  T
Q  523 ggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| |||||||||||  || |||||||||    
T  1746274 ggagagttcaatctctcctccatagtaggtca 1746243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 415 - 554
Target Start/End: Original strand, 15212791 - 15212930
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | |||||     
T  15212791 gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattga 15212889  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    || ||||||||||||||||||||||||| |||| |||||||    
T  15212890 taatggattggagagatcaatctctcccccagattaggtca 15212930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 442 - 569
Target Start/End: Complemental strand, 29796457 - 29796329
Alignment:
Q  442 tttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttg-aaacaaattcattggtagtggattggagagatcaatctctcc 540  Q
    ||||| |||| ||| |||||| ||| | |||| ||||||| |||||| | || |||| ||| ||| |||||  || ||||||||||||||||||||||||    
T  29796457 tttgttcttggagaacttgttgaagctgatttcttgtaacatttttgtacctatttgtaaaaaaactcatttataatggattggagagatcaatctctcc 29796358  T
Q  541 cacagagtaggtcattgttgtaccgaact 569  Q
    | ||  |||||||||||||| ||||||||    
T  29796357 cccaatgtaggtcattgttggaccgaact 29796329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 546
Target Start/End: Original strand, 30143346 - 30143476
Alignment:
Q  416 agattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggt 514  Q
    ||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |    
T  30143346 agattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgat 30143444  T
Q  515 agtggattggagagatcaatctctcccacaga 546  Q
    ||||||||||||||||||||||||||| ||||    
T  30143445 agtggattggagagatcaatctctcccccaga 30143476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 415 - 552
Target Start/End: Original strand, 40328784 - 40328922
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaac-ctttttgcatctctttgaaacaaattcattg 512  Q
    |||||||| ||||||| |||||||||| ||||| |||   || |||||| ||  |||||| ||||||| | ||||| ||||||||| || || | |||||    
T  40328784 gagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgtttaaactaatttcttgtaactcattttgtatctctttgtaagaact-cattg 40328882  T
Q  513 gtagtggattggagagatcaatctctcccacagagtaggt 552  Q
     |||||||||||||||||||||||||||  ||||||||||    
T  40328883 atagtggattggagagatcaatctctcctccagagtaggt 40328922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 468 - 554
Target Start/End: Original strand, 33352209 - 33352294
Alignment:
Q  468 taatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||| |||| |||||||    
T  33352209 taatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcccccagattaggtca 33352294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 554
Target Start/End: Original strand, 27811283 - 27811422
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || ||   |||||     
T  27811283 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaacc-cattga 27811381  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||| ||||||||||||||||| |||| |||||||    
T  27811382 tagtggattgaagagatcaatctctcccccagattaggtca 27811422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 554
Target Start/End: Original strand, 40221750 - 40221889
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||  |||||| ||||||||  |||| ||||||||| || || | | |||     
T  40221750 gagattggtaaaatgggtagaaattagggttgttctttgtgagcttgttgaaactaatttcttgtaacccatttgtatctctttgtaagaact-cgttga 40221848  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  40221849 tagtggattggagagatcaatctctcccccagattaggtca 40221889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 507 - 554
Target Start/End: Complemental strand, 4743285 - 4743238
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| |||||||||||||||||||||||||||| || |||||||||    
T  4743285 tcattgatagtggattggagagatcaatctctcccccaaagtaggtca 4743238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 423 - 554
Target Start/End: Complemental strand, 12702788 - 12702658
Alignment:
Q  423 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 522  Q
    ||||| ||||||||||||  |||| |||   || |||||| ||| |||||| |||||||| |||||  |||||||| || || | ||||| || ||||||    
T  12702788 aaaaagggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgtgtctctttgtaagaact-cattgatattggatt 12702690  T
Q  523 ggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||  ||| |||||||    
T  12702689 ggagagatcaatctctcccctagattaggtca 12702658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 468 - 554
Target Start/End: Complemental strand, 1345480 - 1345395
Alignment:
Q  468 taatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||||||||  | || |||||||||||| || | ||||| |||||||||| |||| |||||||||||| ||||||||||||    
T  1345480 taatttcttgtaacccatatgtatctctttgaaagaact-cattgatagtggattgaagagttcaatctctcccccagagtaggtca 1345395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 504 - 554
Target Start/End: Original strand, 4733800 - 4733850
Alignment:
Q  504 aattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||||||| |||||||||||||||||| ||||||||| |||| |||||||    
T  4733800 aattcattgatagtggattggagagatcgatctctcccccagattaggtca 4733850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 508 - 554
Target Start/End: Complemental strand, 10930269 - 10930223
Alignment:
Q  508 cattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||| |||||||||||||||||||||||||||| |||| |||||||    
T  10930269 cattgatagtggattggagagatcaatctctcccccagattaggtca 10930223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 457 - 554
Target Start/End: Original strand, 4283572 - 4283668
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||| ||   |||||||||||    
T  4283572 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctcccctctagagtaggtca 4283668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 415 - 527
Target Start/End: Original strand, 11137031 - 11137146
Alignment:
Q  415 gagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttg---aaacaaattcatt 511  Q
    |||||||  ||||||||||||||||  | ||| |||||||| |||||| ||| |||||| || ||||| ||||| |||||||||   ||| ||| |||||    
T  11137031 gagattgagaaaatggtagaaattaagtatgtccttgaagaacttgttgaagctaatttcttataaccgttttgtatctctttgtaaaaaaaaactcatt 11137130  T
Q  512 ggtagtggattggaga 527  Q
    | ||||| ||||||||    
T  11137131 gatagtgaattggaga 11137146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 457 - 554
Target Start/End: Original strand, 18655448 - 18655544
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| ||||||||| |||||||||||||||||  || |||||||||    
T  18655448 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattagagagatcaatctctcctccaaagtaggtca 18655544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 457 - 554
Target Start/End: Original strand, 44303903 - 44303999
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||| |||| |||||| |||||| | ||||| ||||||||  || || | ||||| ||||||||||||||| |||||||||||  ||||||||||||    
T  44303903 cttgtcaaagctaatttcttgtaatccttttgtatctctttttaagaact-cattgatagtggattggagagttcaatctctcctccagagtaggtca 44303999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 3303833 - 3303694
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| |||||||||  ||||| |||   || |||||| ||  |||||| |||||||   |||| ||||||||| || || | |||||     
T  3303833 gagattgggaaaatgggtagaaattaagtttgttctttgtgagcttgtttaacctaatttcttgtaactcatttgtatctctttgtaagaact-cattga 3303735  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||| ||||||||||||||||| || |||||||||    
T  3303734 tagtggattgaagagatcaatctctcccccacagtaggtca 3303694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 554
Target Start/End: Original strand, 2627833 - 2627880
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||||||||||||||| |||||||||||  ||||||||||||    
T  2627833 tcattgatagtggattggagagttcaatctctcctccagagtaggtca 2627880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 554
Target Start/End: Original strand, 8153855 - 8153902
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| |||| |||||||||||||||||||| || ||||||||||||    
T  8153855 tcattgatagttgattggagagatcaatctcttcctcagagtaggtca 8153902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 504 - 554
Target Start/End: Original strand, 3772286 - 3772336
Alignment:
Q  504 aattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||| |||| ||||||||||||||||||||||| || | ||||||||||||    
T  3772286 aatttattgatagtggattggagagatcaatctatctctcagagtaggtca 3772336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 468 - 546
Target Start/End: Original strand, 4731717 - 4731794
Alignment:
Q  468 taatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacaga 546  Q
    |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||| ||||||||| ||||    
T  4731717 taatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcgatctctcccccaga 4731794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 457 - 554
Target Start/End: Complemental strand, 19945480 - 19945383
Alignment:
Q  457 cttgttaaagttaatttattgtaacct-ttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||| |||| |||||| ||||||||  ||||| ||||||||| || || | ||||| ||||||||||||||| |||||||||||   |||||||||||    
T  19945480 cttgtcaaagctaatttcttgtaaccacttttgtatctctttggaagaact-cattgatagtggattggagagttcaatctctcctcgagagtaggtca 19945383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 469 - 554
Target Start/End: Complemental strand, 3073981 - 3073898
Alignment:
Q  469 aatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||| ||||||| |||||| ||||||||| || || | ||||| || ||| ||||||||||||||||||||| || |||||||||    
T  3073981 aatttcttgtaacatttttgtatctctttgtaagaact-cattgataatggcttggagagatcaatctctccc-catagtaggtca 3073898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 554
Target Start/End: Original strand, 4162517 - 4162640
Alignment:
Q  429 ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagag 528  Q
    ||||||| |||| ||||| |||  ||| |||||| ||| |||||| |||||||   |||| ||||||||| || || | ||||| ||| ||||||||||     
T  4162517 ggtagaagttaggtttgttctttgagaacttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaact-cattgatag-ggattggagat 4162614  T
Q  529 atcaatctctcccacagagtaggtca 554  Q
    |||||||||||||  |||||||||||    
T  4162615 atcaatctctccccaagagtaggtca 4162640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 554
Target Start/End: Original strand, 18141868 - 18141964
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||| |||||| ||||||||  |||| ||| ||||| || || | | ||| ||||||||||||||||||||||||||||  ||| |||||||    
T  18141868 cttgttgaagctaatttcttgtaacccatttgtatcactttgtaagaact-ctttgatagtggattggagagatcaatctctcccctagattaggtca 18141964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 555
Target Start/End: Complemental strand, 19491862 - 19491722
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| |||||||||| ||||| |||   || |||||| ||  |||||| ||||||||  |||| ||||||||| ||  || || |||     
T  19491862 gagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgttgaaactaatttcttgtaacccatttgtatctctttgtaa-gaactcgttga 19491764  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtcat 555  Q
    |||||||||  |||||||||| |||||| || ||||||||||    
T  19491763 tagtggattaaagagatcaatatctcccccatagtaggtcat 19491722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 504 - 541
Target Start/End: Original strand, 30291701 - 30291738
Alignment:
Q  504 aattcattggtagtggattggagagatcaatctctccc 541  Q
    ||||| ||| ||||||||||||||||||||||||||||    
T  30291701 aattctttgatagtggattggagagatcaatctctccc 30291738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 8965854 - 8965715
Alignment:
Q  415 gagattggaaaaatggtagaaatta-gatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| |||| ||||||||||| | ||||| ||| | ||  ||||| |||||||||| || ||||| ||||  ||||||||| ||  || ||||||     
T  8965854 gagattgggaaaaaggtagaaattagggtttgttctttatgagtttgttgaagttaatttcttataacccttttatatctctttgtaa-gaactcattga 8965756  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||| || |||||||| |||||||||| || | |||||||    
T  8965755 tagtgcatcggagagataaatctctcccccatattaggtca 8965715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 457 - 541
Target Start/End: Complemental strand, 41366734 - 41366651
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctccc 541  Q
    |||||| ||| |||||| || |||||| |||| ||| ||||| || || | ||||  ||||||||||||||||||||||||||||    
T  41366734 cttgtttaagctaatttcttttaacctatttgtatccctttgtaagaact-catttatagtggattggagagatcaatctctccc 41366651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 3e-25; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 379 - 576
Target Start/End: Complemental strand, 22882949 - 22882754
Alignment:
Q  379 gaaagtgaaaagtattgagtgtcttatttatggaaggagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattg 477  Q
    |||||||||||  |||||||| ||| || |||||| ||||||| |||||||| || ||||||| ||||| |||| |||  ||||| ||| |||||| |||    
T  22882949 gaaagtgaaaatcattgagtgccttgttcatggaaagagattg-aaaaatggataaaaattaggtttgttcttggagagtttgttgaagctaatttcttg 22882851  T
Q  478 taacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaa 576  Q
    ||||| ||||| ||||||| | ||  || |||||||||||||||| |||| |||||  |||||| | |||||||||||||||| |||||||| ||||||    
T  22882850 taacccttttgtatctcttcgtaaagaactcattggtagtggattagagaaatcaa--tctcccccggagtaggtcattgttggaccgaactggataaa 22882754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 379 - 576
Target Start/End: Complemental strand, 22934613 - 22934418
Alignment:
Q  379 gaaagtgaaaagtattgagtgtcttatttatggaaggagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattg 477  Q
    |||||||||||  |||||||| ||| || |||||| ||||||| |||||||| || ||||||| ||||| |||| |||  ||||| ||| |||||| |||    
T  22934613 gaaagtgaaaatcattgagtgccttgttcatggaaagagattg-aaaaatggataaaaattaggtttgttcttggagagtttgttgaagctaatttcttg 22934515  T
Q  478 taacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaa 576  Q
    ||||| ||||| ||||||| | ||  || |||||||||||||||| |||| |||||  |||||| | |||||||||||||||| |||||||| ||||||    
T  22934514 taacccttttgtatctcttcgtaaagaactcattggtagtggattagagaaatcaa--tctcccccggagtaggtcattgttggaccgaactggataaa 22934418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 358 - 586
Target Start/End: Original strand, 33089826 - 33090054
Alignment:
Q  358 atagagttggaaaacacttgggaa-agtgaaaagtattgagtgtcttatttatggaaggagattggaaaaatgg-tagaaattagatttgtgcttgaaga 455  Q
    |||||||||| |||||| | |||| ||||||||  |||||||||||| || |||| | ||||||| | | |||  |||||||||  ||||| |||| |||    
T  33089826 atagagttgggaaacaccttggaagagtgaaaatcattgagtgtcttgttcatgggaagagattg-agagatgaatagaaattatgtttgttcttggaga 33089924  T
Q  456 tcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcat 555  Q
     |||||| ||| ||||||||| ||||| ||||| |||||| || ||  || |||||| ||||||||| |||||||||||||||||   ||||||||| ||    
T  33089925 gcttgttgaagctaatttattataaccattttgtatctctctgtaaagaactcattgatagtggattagagagatcaatctctcctctagagtaggttat 33090024  T
Q  556 tgttgtaccgaactagataaaacaattcttt 586  Q
    ||||| |||| ||||||| ||||||||||||    
T  33090025 tgttggaccggactagat-aaacaattcttt 33090054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 415 - 571
Target Start/End: Original strand, 12073397 - 12073553
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| |||||||||| ||||| |||   || |||||| ||| ||||||||||||||   |||| ||||||||| || || | |||||     
T  12073397 gagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgttgaagctaatttattgtaactcatttgtatctctttgtaagaact-cattga 12073495  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactag 571  Q
    ||||||||||||||||||||||||||   |||||||||||||||||| ||||||||||    
T  12073496 tagtggattggagagatcaatctctcttccagagtaggtcattgttggaccgaactag 12073553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 468 - 571
Target Start/End: Original strand, 12119598 - 12119700
Alignment:
Q  468 taatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaa 567  Q
    |||||| |||||||| ||||| ||||||||| ||  || |||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||    
T  12119598 taatttcttgtaacccttttgtatctctttgtaaagaactcatttatagtggattggagagatcaatctctccca-agagtaggtcattgttggaccgaa 12119696  T
Q  568 ctag 571  Q
    ||||    
T  12119697 ctag 12119700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 421 - 554
Target Start/End: Complemental strand, 56178793 - 56178661
Alignment:
Q  421 ggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtgga 520  Q
    ||||||| ||||||||||||  |||| |||   || |||||| ||| |||||| |||||||| ||||| ||||||||| || || | ||||| |||||||    
T  56178793 ggaaaaagggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgtatctctttgtaagaact-cattgatagtgga 56178695  T
Q  521 ttggagagatcaatctctcccacagagtaggtca 554  Q
    ||||||||||||||||||||  ||||||||||||    
T  56178694 ttggagagatcaatctctcctccagagtaggtca 56178661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 429 - 569
Target Start/End: Original strand, 379400 - 379539
Alignment:
Q  429 ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagag 528  Q
    |||||||||||| ||||| |||   || |||||| ||| |||||| ||||||||  |||| ||| ||||| || || |  |||| |||||||||||||||    
T  379400 ggtagaaattaggtttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatcgctttgtaagaacta-attgatagtggattggagag 379498  T
Q  529 atcaatctctcccacagagtaggtcattgttgtaccgaact 569  Q
    ||||||||||||  |||||||||||||||||| ||||||||    
T  379499 atcaatctctcctccagagtaggtcattgttggaccgaact 379539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 27417128 - 27416989
Alignment:
Q  415 gagattggaaaaatg-gtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| |||||| |||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || ||| ||||||     
T  27417128 gagattggtaaaatgtgtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-aaactcattga 27417030  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  27417029 tagtggattggagagatcaatctctcccccagattaggtca 27416989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 415 - 540
Target Start/End: Original strand, 40632450 - 40632575
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||| |||| |||   || |||||| ||| |||||| ||||||||| |||| ||||||||| || || | |||||     
T  40632450 gagattgggaaaatgggtagaaattagagttgttctttgtgagcttgttgaagctaatttcttgtaacctatttgtatctctttgtaagaact-cattga 40632548  T
Q  514 tagtggattggagagatcaatctctcc 540  Q
    |||||||||||||||||||||||||||    
T  40632549 tagtggattggagagatcaatctctcc 40632575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 415 - 567
Target Start/End: Original strand, 46703505 - 46703658
Alignment:
Q  415 gagattggaaaaatg-gtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacct-ttttgcatctctttgaaacaaattcattg 512  Q
    |||||||| |||||| |||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  ||||| ||||||||| || || | ||||     
T  46703505 gagattgggaaaatgagtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccattttgtatctctttgtaagaact-cattt 46703603  T
Q  513 gtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaa 567  Q
     |||||||||||||||||||||||||||  |||||||||||||||||| ||||||    
T  46703604 atagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaa 46703658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 429 - 554
Target Start/End: Original strand, 8665428 - 8665552
Alignment:
Q  429 ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagag 528  Q
    ||||||||||||  |||| |||  ||| |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||    
T  8665428 ggtagaaattagggttgttctttgagagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagag 8665526  T
Q  529 atcaatctctcccacagagtaggtca 554  Q
    ||||||||||||  ||||||||||||    
T  8665527 atcaatctctcctccagagtaggtca 8665552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 9927621 - 9927482
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | |||||     
T  9927621 gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattga 9927523  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  9927522 tagtggattggagagatcaatctctcccccagattaggtca 9927482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 457 - 569
Target Start/End: Complemental strand, 26699563 - 26699451
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 556  Q
    |||||| ||| |||||| |||||||  ||||| ||||||||| ||  || |||||  || ||||||||||||||||||||||  | ||||||||||||||    
T  26699563 cttgttgaagctaatttcttgtaactcttttgtatctctttgtaaagaactcatttataatggattggagagatcaatctctatcccagagtaggtcatt 26699464  T
Q  557 gttgtaccgaact 569  Q
    |||| ||||||||    
T  26699463 gttggaccgaact 26699451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 457 - 569
Target Start/End: Original strand, 2209761 - 2209873
Alignment:
Q  457 cttgttaaagttaatttattgtaacct-ttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcat 555  Q
    |||||| ||| |||||| ||||||||  ||||| ||||||||| || || | ||||| ||||||||||||||||| |||||||||  |||||||||||||    
T  2209761 cttgttgaagctaatttcttgtaacccattttgtatctctttgtaagaact-cattgatagtggattggagagattaatctctcctccagagtaggtcat 2209859  T
Q  556 tgttgtaccgaact 569  Q
     |||| ||||||||    
T  2209860 ggttggaccgaact 2209873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 415 - 551
Target Start/End: Complemental strand, 52095525 - 52095389
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||  |||| |||   || ||||| |||| |||||| ||||||||  |||| ||||||||| || |||| | |||     
T  52095525 gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctctttgtaagaaat-ctttga 52095427  T
Q  514 tagtggattggagagatcaatctctcccacagagtagg 551  Q
    |||||||||||||||||||||||||||  |||||||||    
T  52095426 tagtggattggagagatcaatctctcctccagagtagg 52095389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 382 - 554
Target Start/End: Complemental strand, 6542376 - 6542203
Alignment:
Q  382 agtgaaaagtattgagtgtcttatttatggaaggagattgg--aaaaatggtagaaattag-atttgtgcttgaagatcttgttaaagttaatttattgt 478  Q
    |||||||| ||||||||||||| || || |  |||||||||  |||||||||||||||||| |||||| |||   || |||||| ||  |||||| ||||    
T  6542376 agtgaaaattattgagtgtcttgttcattgg-ggagattgggaaaaaatggtagaaattaggatttgttctttgtgagcttgttgaaactaatttcttgt 6542278  T
Q  479 aacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
     | | ||||| ||||||||| || || | | ||| |||||||||||||||||||||||||||| ||| ||||||||    
T  6542277 tagccttttgtatctctttgtaagaact-cgttgatagtggattggagagatcaatctctcccccagggtaggtca 6542203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 457 - 569
Target Start/End: Complemental strand, 50262821 - 50262710
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 556  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||| ||||||||| |||||||| |||  ||||||||||||||    
T  50262821 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagttgattggagatatcaatctttcctccagagtaggtcatt 50262723  T
Q  557 gttgtaccgaact 569  Q
    |||| ||||||||    
T  50262722 gttggaccgaact 50262710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 415 - 576
Target Start/End: Complemental strand, 37229885 - 37229724
Alignment:
Q  415 gagattggaaaaatggtagaaattagatt-tgtgcttgaagatcttgttaaagttaatttattgtaacc-tttttgcatctctttgaaacaaattcattg 512  Q
    |||||||| |||||||||||||||||  | ||| |||   || ||||||||||  ||||| |||||||| |||||  ||||||||| || || | ||||     
T  37229885 gagattgggaaaatggtagaaattagggtgtgttctttgtgagcttgttaaagcaaatttgttgtaaccctttttatatctctttgtaagaact-cattt 37229787  T
Q  513 gtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaa 576  Q
     |||||||||||||||||||||||||||| || |||||||||  |||| |||||||||| ||||    
T  37229786 atagtggattggagagatcaatctctccctcatagtaggtca-agttggaccgaactaggtaaa 37229724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 419 - 546
Target Start/End: Original strand, 37740635 - 37740761
Alignment:
Q  419 ttggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtg 518  Q
    ||||||||| |||| |||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||    
T  37740635 ttggaaaaagggtataaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtg 37740733  T
Q  519 gattggagagatcaatctctcccacaga 546  Q
    ||||||||||||||||||||||| ||||    
T  37740734 gattggagagatcaatctctcccccaga 37740761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 423 - 554
Target Start/End: Original strand, 48143057 - 48143187
Alignment:
Q  423 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 522  Q
    ||||| ||||||||||||  |||| |||   || |||||| ||| |||||| |||||||| ||||| |||||||   || || | ||||| |||||||||    
T  48143057 aaaaaaggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccttttgtatctcttcataagaact-cattgatagtggatt 48143155  T
Q  523 ggagagatcaatctctcccacagagtaggtca 554  Q
    ||||||||||||||||||  ||||||||||||    
T  48143156 ggagagatcaatctctcctccagagtaggtca 48143187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 468 - 554
Target Start/End: Complemental strand, 26175745 - 26175660
Alignment:
Q  468 taatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||| |||| |||||||    
T  26175745 taatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcccccagattaggtca 26175660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 458 - 556
Target Start/End: Original strand, 33989893 - 33989991
Alignment:
Q  458 ttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 556  Q
    ||||| ||| |||||| |||||| | ||||| ||||||||| ||  || || ||  |||||||||||||||||||||||||||  ||||||||||||||    
T  33989893 ttgttgaagctaatttcttgtaatccttttgtatctctttgtaaataactcgttaatagtggattggagagatcaatctctccaccagagtaggtcatt 33989991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 430 - 567
Target Start/End: Original strand, 34112838 - 34112973
Alignment:
Q  430 gtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagaga 529  Q
    ||||||||||  ||||| || | ||| |||||| ||| ||||||  ||||||| ||||||||||||||| ||  || |||||| ||||| | ||||||||    
T  34112838 gtagaaattatgtttgttctaggagagcttgttgaagctaatttcatgtaacccttttgcatctctttgtaaagaactcattgatagtgaagtggagaga 34112937  T
Q  530 tcaatctctcccacagagtaggtcattgttgtaccgaa 567  Q
    ||  ||||||||  | ||||||||||||||| ||||||    
T  34112938 tc--tctctcccctatagtaggtcattgttggaccgaa 34112973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 415 - 552
Target Start/End: Complemental strand, 34570577 - 34570440
Alignment:
Q  415 gagattggaaaaat-ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||| ||||||||||||  |||| |||   || |||||| ||| |||||| ||||||||   ||| ||||||||| || || | |||||     
T  34570577 gagattgggaaaataggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccaattgtatctctttgtaagaact-cattga 34570479  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggt 552  Q
    |||||||||||||||||||||||||||| |||| |||||    
T  34570478 tagtggattggagagatcaatctctcccccagattaggt 34570440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 457 - 554
Target Start/End: Original strand, 41964463 - 41964560
Alignment:
Q  457 cttgttaaagttaatttattgtaacct-ttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||| |||||||||||||||  ||||| ||| ||||| || || | ||||| |||||||||||||||||||||||||||  ||||||||||||    
T  41964463 cttgtttaagctaatttattgtaacccattttgtatccctttgtaagaact-cattgatagtggattggagagatcaatctctcctccagagtaggtca 41964560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 457 - 571
Target Start/End: Complemental strand, 50673967 - 50673855
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 556  Q
    |||||| ||| |||||| |||||||   |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||  ||||||||||||      
T  50673967 cttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcctccagagtaggtca-a 50673870  T
Q  557 gttgtaccgaactag 571  Q
    |||| ||||||||||    
T  50673869 gttggaccgaactag 50673855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 421 - 541
Target Start/End: Original strand, 4587970 - 4588090
Alignment:
Q  421 ggaaaaatggtagaaatta-gatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtgg 519  Q
    ||||||| ||||||||||| ||||||| |||    | |||||| ||| |||||| |||||||| ||||| ||||||||| || || | ||||| ||||||    
T  4587970 ggaaaaaaggtagaaattaagatttgttctttgtaagcttgttgaagctaatttcttgtaacccttttgtatctctttgtaagaact-cattgatagtgg 4588068  T
Q  520 attggagagatcaatctctccc 541  Q
    |||||||||| |||||||||||    
T  4588069 attggagagaacaatctctccc 4588090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 457 - 554
Target Start/End: Complemental strand, 12744045 - 12743949
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||| |||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||| || | |||||||    
T  12744045 cttgtcaaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcccccatattaggtca 12743949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 457 - 554
Target Start/End: Complemental strand, 12745434 - 12745338
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||| |||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||| || | |||||||    
T  12745434 cttgtcaaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcccccatattaggtca 12745338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 12739713 - 12739574
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||  |||| |||   || ||||| |||| |||||| ||||||||  |||| |||| |||| |  || | |||||     
T  12739713 gagattgggaaaatggatagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctatttgtatgaact-cattga 12739615  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  12739614 tagtggattggagagatcaatctctcccccagattaggtca 12739574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 554
Target Start/End: Original strand, 26364241 - 26364380
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| |||||||   |||| ||||||||| || || | ||||      
T  26364241 gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaact-cattaa 26364339  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  26364340 tagtggattggagagatcaatctctcccccagattaggtca 26364380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 463 - 554
Target Start/End: Complemental strand, 5370197 - 5370107
Alignment:
Q  463 aaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||| |||||| |||||||| ||||| ||||||||| || || | ||||| ||||||| | |||||||||||||||||  ||||||||||||    
T  5370197 aaagctaatttcttgtaacccttttgtatctctttgtaagaact-cattgatagtggactagagagatcaatctctcctccagagtaggtca 5370107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 457 - 552
Target Start/End: Original strand, 5429727 - 5429821
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggt 552  Q
    |||||| ||| |||||| ||||||||  |||| |||| |||| || || | ||||| |||||||||||||||||||||||||||| |||| |||||    
T  5429727 cttgttgaagctaatttcttgtaacccatttgtatctatttgtaagaact-cattgatagtggattggagagatcaatctctcccccagattaggt 5429821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 507 - 554
Target Start/End: Complemental strand, 29999877 - 29999830
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| |||||||||||||||||||||||||||  ||||||||||||    
T  29999877 tcattgatagtggattggagagatcaatctctcctccagagtaggtca 29999830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 468 - 559
Target Start/End: Complemental strand, 37755070 - 37754979
Alignment:
Q  468 taatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcattgtt 559  Q
    |||||| |||||||||||||  ||||||||  || ||| |||||| || ||| ||| ||||||||||||||||| || ||||||| ||||||    
T  37755070 taatttcttgtaacctttttttatctctttctaaaaaactcattgataatggtttgaagagatcaatctctcccccatagtaggtaattgtt 37754979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 507 - 554
Target Start/End: Complemental strand, 47038482 - 47038435
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| |||||||||||||||||||||||||||| ||||||| ||||    
T  47038482 tcattgatagtggattggagagatcaatctctcccccagagtaagtca 47038435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 417 - 554
Target Start/End: Complemental strand, 5208003 - 5207866
Alignment:
Q  417 gattggaaaaatggtagaaattaga-tttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggta 515  Q
    ||||||||||| ||||||||||||  ||||| |||   || |||||| ||| |||||||||| |||| || |  |||| |||| || || | ||||| ||    
T  5208003 gattggaaaaagggtagaaattagggtttgttctttgtgaacttgttgaagctaatttattgcaacccttgtatatctatttgtaagaact-cattgata 5207905  T
Q  516 gtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||| ||||||||||||| | ||||||||||||    
T  5207904 gtggattggaaagatcaatctctctcccagagtaggtca 5207866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 536
Target Start/End: Original strand, 24969117 - 24969238
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||||||||||| |||||||||||||||| |||   || |||||| ||| |||||| |||||||   |||| ||||||||| ||  || | ||||     
T  24969117 gagattggaaaaatgggtagaaattagatttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaa-gaactaattga 24969215  T
Q  514 tagtggattggagagatcaatct 536  Q
    ||||||||||||||||| |||||    
T  24969216 tagtggattggagagataaatct 24969238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 457 - 554
Target Start/End: Original strand, 6656004 - 6656100
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||| |||||| |||||||   |||| ||||||||| || || | ||||| ||||||||||||||||||||||||||   ||||||||||||    
T  6656004 cttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcatccagagtaggtca 6656100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 457 - 538
Target Start/End: Complemental strand, 12744167 - 12744087
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctct 538  Q
    ||||| |||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||    
T  12744167 cttgtcaaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctct 12744087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 457 - 554
Target Start/End: Complemental strand, 36463509 - 36463413
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | | |||  ||||||||||||||||||||||||||| |||| |||||||    
T  36463509 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-ctttgacagtggattggagagatcaatctctcccccagattaggtca 36463413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 457 - 554
Target Start/End: Complemental strand, 48893758 - 48893662
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||| |||||| |||||||   |||| ||||||||| || || | | ||| |||||||||||||||||||||||||||| |||| |||||||    
T  48893758 cttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaact-ctttgatagtggattggagagatcaatctctcccccagattaggtca 48893662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 554
Target Start/End: Original strand, 5871825 - 5871964
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||||||||||| |||||||||| ||||| |||   || |||||| |||  ||||| ||||||||  |||  ||| ||||| || || | | |||     
T  5871825 gagattggaaaaatgggtagaaattaggtttgttctttgtgagcttgtttaagcaaatttcttgtaacccatttttatcactttgcaagaact-ctttga 5871923  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||||||| |||||||||||||||||| |||| |||||||    
T  5871924 tagtggattagagagatcaatctctcccccagattaggtca 5871964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 458 - 554
Target Start/End: Original strand, 8648188 - 8648283
Alignment:
Q  458 ttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||| ||| |||||| || |||||  |||| ||||||||| || || | ||||| || ||||||||||||||||||||||||  ||||||||||||    
T  8648188 ttgttgaagctaatttcttataacccatttgtatctctttgtaagaact-cattgatattggattggagagatcaatctctcctccagagtaggtca 8648283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 507 - 571
Target Start/End: Complemental strand, 13992364 - 13992300
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactag 571  Q
    |||||| ||||||||||||||| |||||||||||  ||||||||||||   ||| ||||||||||    
T  13992364 tcattgatagtggattggagagttcaatctctcctccagagtaggtcaagtttggaccgaactag 13992300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 457 - 569
Target Start/End: Complemental strand, 21703956 - 21703845
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 556  Q
    |||||| ||| | |||| ||||| |||||||| |||| |||| ||  || ||||||  ||||||||||||| |||||||| |||| || |||||||||||    
T  21703956 cttgttgaagatgatttcttgtaccctttttgtatctttttgtaaagaactcattgacagtggattggagatatcaatctatccc-catagtaggtcatt 21703858  T
Q  557 gttgtaccgaact 569  Q
    |||  ||||||||    
T  21703857 gtttgaccgaact 21703845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 554
Target Start/End: Original strand, 35662446 - 35662585
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    ||||||| |||||||| ||||||||||  |||| ||| | ||  ||||| ||| |||||| |||||||   |||| ||||||||| || || | |||||     
T  35662446 gagattgaaaaaatgggtagaaattagggttgttctttatgagtttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaact-cattga 35662544  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||||||||||||||||||| |||||   |||||||||||    
T  35662545 tagtggattggagagatcaatatctcctcaagagtaggtca 35662585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 457 - 541
Target Start/End: Original strand, 36994572 - 36994655
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctccc 541  Q
    |||||| ||| |||||| ||||||||  |||| ||| ||||| || || | ||||| ||||||||||||||||||||||||||||    
T  36994572 cttgttgaagctaatttcttgtaacccatttgtatccctttgtaagaact-cattgatagtggattggagagatcaatctctccc 36994655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 514 - 554
Target Start/End: Original strand, 41639530 - 41639570
Alignment:
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  41639530 tagtggattggagagatcaatctctcctccagagtaggtca 41639570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 541
Target Start/End: Complemental strand, 12747919 - 12747793
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||  |||| |||   || ||||| |||| |||||| ||||||||  |||| |||| |||| |  || | |||||     
T  12747919 gagattgggaaaatggatagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctatttgtatgaact-cattga 12747821  T
Q  514 tagtggattggagagatcaatctctccc 541  Q
    ||||||||||||||||||||||||||||    
T  12747820 tagtggattggagagatcaatctctccc 12747793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 457 - 540
Target Start/End: Original strand, 54883068 - 54883150
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcc 540  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| ||||||||||||| |||||||||||||    
T  54883068 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagggatcaatctctcc 54883150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 507 - 541
Target Start/End: Original strand, 3913545 - 3913579
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctccc 541  Q
    |||||| ||||||||||||||||||||||||||||    
T  3913545 tcattgatagtggattggagagatcaatctctccc 3913579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 468 - 538
Target Start/End: Complemental strand, 12745545 - 12745476
Alignment:
Q  468 taatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctct 538  Q
    |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||    
T  12745545 taatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctct 12745476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 429 - 539
Target Start/End: Original strand, 29254514 - 29254623
Alignment:
Q  429 ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagag 528  Q
    ||||||||||||| ||||  || | || |||||| |||||||||| ||| ||||  ||||  |||||||| || || | | ||| |||||||||||||||    
T  29254514 ggtagaaattagagttgttttttatgagcttgttgaagttaatttcttgcaacccatttgtgtctctttgtaagaact-cgttgatagtggattggagag 29254612  T
Q  529 atcaatctctc 539  Q
    |||||||||||    
T  29254613 atcaatctctc 29254623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 424 - 498
Target Start/End: Complemental strand, 34788928 - 34788854
Alignment:
Q  424 aaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttg 498  Q
    |||||||||||||||||  |||  |||| ||| |||||| |||||||||| |||||||  ||||| |||||||||    
T  34788928 aaaatggtagaaattaggattgctcttggagagcttgttgaagttaatttcttgtaactcttttgtatctctttg 34788854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 468 - 554
Target Start/End: Original strand, 51337123 - 51337208
Alignment:
Q  468 taatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||||||| ||||| ||||| ||||||||  || || | ||||| ||||| ||| ||||||||||||||||||||| | |||||||    
T  51337123 taatttattataacccttttgtatctctttttaagaact-cattgatagtgtattagagagatcaatctctcccacacattaggtca 51337208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 429 - 554
Target Start/End: Complemental strand, 52467502 - 52467378
Alignment:
Q  429 ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagag 528  Q
    |||||||||||| ||||| |||   || |||||| ||| |||| | ||||||||  |||| ||| ||||| || || ||  ||| |||||||||||||||    
T  52467502 ggtagaaattaggtttgttctttgtgagcttgttgaagctaatatcttgtaacccatttgtatcactttgtaataacttt-ttgatagtggattggagag 52467404  T
Q  529 atcaatctctcccacagagtaggtca 554  Q
    |||||||||||||  ||| |||||||    
T  52467403 atcaatctctccccgagattaggtca 52467378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 424 - 537
Target Start/End: Original strand, 6677482 - 6677597
Alignment:
Q  424 aaaatggtagaaattagatttgtg--cttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggat 521  Q
    ||||||||||||||||| ||| |   |||| ||| |||||| ||| |||||| |||||||| ||||| || |||||| ||  || || ||| || |||||    
T  6677482 aaaatggtagaaattaggttttttttcttggagagcttgttgaagctaatttcttgtaacccttttgtatatctttgtaaagaagtctttgataatggat 6677581  T
Q  522 tggagagatcaatctc 537  Q
    | ||||||||||||||    
T  6677582 ttgagagatcaatctc 6677597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 422 - 498
Target Start/End: Complemental strand, 44570521 - 44570445
Alignment:
Q  422 gaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttg 498  Q
    ||||||||||||||||||  |||||  ||| ||| |||||| ||  |||||| ||||||| |||||| |||||||||    
T  44570521 gaaaaatggtagaaattatgtttgttgttggagagcttgttgaaactaatttcttgtaacatttttgtatctctttg 44570445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 566
Target Start/End: Complemental strand, 44967992 - 44967841
Alignment:
Q  415 gagattggaaaaatggtagaaattagattt-gtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||||||||||||| ||| |  |||| ||| |||| | |||  ||||| |||||||| ||| | ||||||||| || ||| || |||     
T  44967992 gagattgggaaaatggtagaaattaggttttgctcttggagagcttgctgaagccaatttcttgtaaccattt-gtatctctttgtaaaaaactcgttga 44967894  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccga 566  Q
     ||| |||| ||| |||||||||||||| |||| || |||| ||||| |||||    
T  44967893 gagtagattagagggatcaatctctcccccagaataagtcactgttggaccga 44967841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 1e-24; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 424 - 586
Target Start/End: Original strand, 316777 - 316938
Alignment:
Q  424 aaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattg 523  Q
    |||| |||||||||||| ||||| |||| ||| |||||| ||| |||||| |||||| | ||||| ||||||||| ||  || |||||| || ||||| |    
T  316777 aaaaaggtagaaattaggtttgttcttggagagcttgttgaagctaatttcttgtaatccttttgtatctctttgtaaagaactcattgataatggatcg 316876  T
Q  524 gagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaaacaattcttt 586  Q
    ||| ||||||||||||||  ||||||||||||||||| |||||||| | | ||||||||||||    
T  316877 gagggatcaatctctcccctagagtaggtcattgttggaccgaacttggt-aaacaattcttt 316938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 418 - 559
Target Start/End: Original strand, 3325922 - 3326063
Alignment:
Q  418 attggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagt 517  Q
    |||| ||||| |||||||||||| ||||| |||||||| |||||| ||| |||||| |||||||| || || ||||||||| ||  || ||| || | ||    
T  3325922 attgaaaaaaaggtagaaattagttttgttcttgaagagcttgttgaagctaatttcttgtaaccattgtgtatctctttgtaaagaactcaatgatggt 3326021  T
Q  518 ggattggagagatcaatctctcccacagagtaggtcattgtt 559  Q
    ||||| ||||||||||| |||| |||| ||||||||||||||    
T  3326022 ggattagagagatcaatatctctcacatagtaggtcattgtt 3326063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 415 - 554
Target Start/End: Original strand, 25412766 - 25412904
Alignment:
Q  415 gagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggt 514  Q
    |||||||| |||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| ||||||||| || || | ||||| |    
T  25412766 gagattgggaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgtaagaact-cattgat 25412864  T
Q  515 agtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  25412865 agtggattggagagatcaatctctcctccagagtaggtca 25412904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 457 - 554
Target Start/End: Original strand, 28278364 - 28278460
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || ||| |||||| |||||||||||||||||||||||||||  ||||||||||||    
T  28278364 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaa-aaactcattgatagtggattggagagatcaatctctcctccagagtaggtca 28278460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 457 - 554
Target Start/End: Original strand, 37439189 - 37439285
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||| ||||||||||| |||||||  ||||| ||||||||| || || | ||||| |||||||||||||||||||||||||||  ||||||||||||    
T  37439189 cttgtcaaagttaatttcttgtaactcttttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcctccagagtaggtca 37439285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 415 - 554
Target Start/End: Original strand, 213470 - 213609
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||||||| |||||| ||||||||  |||| ||||||||| || || | |||||     
T  213470 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttaaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattga 213568  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||  || |||||||||    
T  213569 tagtggattggagagatcaatctctcctccatagtaggtca 213609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 415 - 554
Target Start/End: Original strand, 13239756 - 13239895
Alignment:
Q  415 gagattggaaaaa-tggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    ||||||||||||| |||||||||||||  || | |||   || |||||| ||| |||||| |||||||  ||||| ||||||||| || || | |||||     
T  13239756 gagattggaaaaaatggtagaaattagggtttttctttgtgaacttgttgaagctaatttcttgtaactcttttgtatctctttgtaagaact-cattga 13239854  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  13239855 tagtggattggagagatcaatctctcctccagagtaggtca 13239895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 415 - 554
Target Start/End: Original strand, 16452085 - 16452224
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||||||||||| |||||||||  ||||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||      
T  16452085 gagattggaaaaatgggtagaaattaagtttgttctttctgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattca 16452183  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||||||||||||||| |||||||||| ||||||||||||    
T  16452184 tagtggattggagagataaatctctcccccagagtaggtca 16452224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 415 - 554
Target Start/End: Original strand, 33831685 - 33831824
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||||||||||| |||||||||| ||||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | |||||     
T  33831685 gagattggaaaaatgggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattga 33831783  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||| ||||||||||||||||| || | |||||||    
T  33831784 tagtggattgaagagatcaatctctcccccatattaggtca 33831824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 423 - 569
Target Start/End: Original strand, 13343075 - 13343219
Alignment:
Q  423 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 522  Q
    ||||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||| | ||||| |||||||||||   || |||||| |||||||||    
T  13343075 aaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaatccttttgtatctctttgaag--aactcattgatagtggatt 13343172  T
Q  523 ggagagatcaatctctcccacagagtaggtcattgttgtaccgaact 569  Q
    |||||| |||||||||||  |||||||||||||  ||| ||||||||    
T  13343173 ggagagttcaatctctcctccagagtaggtcatgtttggaccgaact 13343219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 514 - 569
Target Start/End: Complemental strand, 27637677 - 27637622
Alignment:
Q  514 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaact 569  Q
    |||||||||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  27637677 tagtggattggagagatcaatctctcctgcagagtaggtcattgttggaccgaact 27637622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 416 - 569
Target Start/End: Complemental strand, 10700809 - 10700659
Alignment:
Q  416 agattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggta 515  Q
    |||||||||||| |||||||||||| ||||| |||  ||| |||||| ||| ||| || || |||| |||||| |||||||| |||  || |||||| ||    
T  10700809 agattggaaaaaaggtagaaattaggtttgttcttagagagcttgttgaagctaa-ttcttataacatttttgtatctctttaaaaagaactcattgata 10700711  T
Q  516 gtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaact 569  Q
    ||| | ||||||||||  |||||||| || ||||||||||||||  ||||||||    
T  10700710 gtgaagtggagagatc--tctctcccccatagtaggtcattgtttcaccgaact 10700659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 457 - 554
Target Start/End: Complemental strand, 30683044 - 30682946
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaa-attcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||| |||||| |||||||| ||||| || |||||| || || | |||||| |||||||||||||||||||||||||||| |||| |||||||    
T  30683044 cttgttgaagctaatttcttgtaacccttttgtatttctttgtaagaatactcattgatagtggattggagagatcaatctctcccccagattaggtca 30682946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 421 - 554
Target Start/End: Original strand, 30182600 - 30182732
Alignment:
Q  421 ggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtgga 520  Q
    ||||||||||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||  ||||||||| || || | ||||| |||||||    
T  30182600 ggaaaaatggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttctatctctttggaagaact-cattgatagtgga 30182698  T
Q  521 ttggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||| |||||||||||  ||||||| ||||    
T  30182699 ttggagagttcaatctctcctccagagtatgtca 30182732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 28750818 - 28750679
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||  |||| ||| | ||  ||||| ||||||||||  |||||||  |||| |||| |||| || || | |||||     
T  28750818 gagattgggaaaatgggtagaaattagggttgttctttatgaaattgttgaagttaatttcctgtaacccatttgtatctttttgtaagaact-cattga 28750720  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  28750719 tagtggattggagagatcaatctctcccccagattaggtca 28750679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 415 - 546
Target Start/End: Original strand, 38747010 - 38747141
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || ||| ||||||     
T  38747010 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttggaa-aaactcattga 38747108  T
Q  514 tagtggattggagagatcaatctctcccacaga 546  Q
    ||| |||||||||||||||||||||||| ||||    
T  38747109 tagaggattggagagatcaatctctccctcaga 38747141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 415 - 554
Target Start/End: Original strand, 40147266 - 40147405
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| |||||||   |||| ||||||||| || || | |||||     
T  40147266 gagattgggaaaatgggtagaaattagggttgttcttcgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaact-cattga 40147364  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  40147365 tagtggattggagagatcaatctctcctccagagtaggtca 40147405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 514 - 569
Target Start/End: Original strand, 4160703 - 4160758
Alignment:
Q  514 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaact 569  Q
    |||||||||||||||||||||||||||  |||||||||||||||||| ||| ||||    
T  4160703 tagtggattggagagatcaatctctcctccagagtaggtcattgttggaccaaact 4160758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 429 - 576
Target Start/End: Complemental strand, 10054964 - 10054818
Alignment:
Q  429 ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagag 528  Q
    |||||||||||  ||||| ||||||||  ||||| ||| |||||| || ||||| ||||| ||||||||| ||  || |||||| ||||| ||||||||     
T  10054964 ggtagaaattatgtttgttcttgaagagtttgttgaagctaatttcttataacc-ttttgtatctctttgtaatgaactcattgatagtgtattggagat 10054866  T
Q  529 atcaatctctcccacagagtaggtcattgttgtaccgaactagataaa 576  Q
    |||||| |||||| || ||| ||| ||||||| ||| |||||| ||||    
T  10054865 atcaatatctcccccaaagtgggtaattgttggaccaaactaggtaaa 10054818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 554
Target Start/End: Original strand, 13488209 - 13488347
Alignment:
Q  416 agattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggt 514  Q
    ||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |    
T  13488209 agattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgat 13488307  T
Q  515 agtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||  ||| |||||||    
T  13488308 agtggattggagagatcaatctctccccgagattaggtca 13488347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 415 - 554
Target Start/End: Original strand, 16409480 - 16409619
Alignment:
Q  415 gagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggt 514  Q
    ||||||||||||| ||||||||||||  |||| |||   || ||||| |||  |||||| |||||||  ||||| ||||||||   |  || |||||| |    
T  16409480 gagattggaaaaagggtagaaattagggttgttctttgtgaacttgtcaaatctaatttcttgtaactcttttgtatctcttttgtaagaactcattgat 16409579  T
Q  515 agtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||| |||||||||||  ||||||||||||    
T  16409580 agtggattggagagttcaatctctcctccagagtaggtca 16409619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 429 - 588
Target Start/End: Complemental strand, 33906179 - 33906021
Alignment:
Q  429 ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagag 528  Q
    |||| ||||||| || ||||||| ||| |||||  ||| ||| || |||||| | ||||| ||||||||| ||  || |||||| |||| ||||||| ||    
T  33906179 ggtataaattaggttagtgcttggagagcttgtcgaagctaacttcttgtaatccttttgtatctctttgtaaagaactcattgatagtagattggaaag 33906080  T
Q  529 atcaatctctcccacagagtaggtcattgttgtaccgaactagataaaacaattcttttg 588  Q
    |||||||||| ||  ||||||||||| ||||| ||||| || | | ||||||||||||||    
T  33906079 atcaatctcttccctagagtaggtcaatgttggaccgagctgggt-aaacaattcttttg 33906021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 457 - 554
Target Start/End: Original strand, 32636872 - 32636968
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||| |||| |||||| ||||||||  |||| ||||||||| || || | | ||| |||||||||||||||||||||||||||| |||| |||||||    
T  32636872 cttgtcaaagctaatttcttgtaacccatttgtatctctttgtaagaact-ctttgatagtggattggagagatcaatctctcccccagattaggtca 32636968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 457 - 554
Target Start/End: Complemental strand, 42428550 - 42428454
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||| || | |||||||    
T  42428550 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcccccatattaggtca 42428454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 423 - 554
Target Start/End: Complemental strand, 36074196 - 36074067
Alignment:
Q  423 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 522  Q
    ||||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||  ||||| |||||||||||   || |||||| |||||||||    
T  36074196 aaaaagggtagaaattagggttgttctttgcgaacttgtcaaagctaatttcttgtaactcttttgtatctctttgaag--aactcattgatagtggatt 36074099  T
Q  523 ggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| |||||||||||  || |||||||||    
T  36074098 ggagagttcaatctctcctccaaagtaggtca 36074067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 457 - 552
Target Start/End: Complemental strand, 9049462 - 9049368
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggt 552  Q
    |||||| ||| |||||| |||||||| ||||| ||||||||| || || | |||||  |||||||||||||||||||| |||||| || |||||||    
T  9049462 cttgttgaagctaatttcttgtaaccattttgtatctctttgtaagaact-cattgacagtggattggagagatcaatatctcccccaaagtaggt 9049368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 415 - 541
Target Start/End: Complemental strand, 39468712 - 39468586
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | |||||     
T  39468712 gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattga 39468614  T
Q  514 tagtggattggagagatcaatctctccc 541  Q
    ||||||||| ||||||||||||||||||    
T  39468613 tagtggattagagagatcaatctctccc 39468586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 457 - 554
Target Start/End: Original strand, 533817 - 533913
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||| ||||||||||||||| || | |||||||    
T  533817 cttgttgaagctaattttttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggaaagatcaatctctcccccatattaggtca 533913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 457 - 554
Target Start/End: Original strand, 538073 - 538169
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||| ||||||||||||||||||||||| || | |||||||    
T  538073 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtagattggagagatcaatctctcccccatattaggtca 538169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 468 - 568
Target Start/End: Original strand, 30793195 - 30793293
Alignment:
Q  468 taatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaa 567  Q
    ||||||||||||||| ||||| ||||||||| ||  || | |||| ||||| | ||||||||||  ||||||||  |||||| |||||||||| ||||||    
T  30793195 taatttattgtaaccattttgtatctctttgtaaagaactaattgatagtgaagtggagagatc--tctctcccctagagtaagtcattgttggaccgaa 30793292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 507 - 571
Target Start/End: Complemental strand, 8566017 - 8565954
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactag 571  Q
    |||||| |||||||||||||||||||||||||| | |||| |||||||  |||| ||||||||||    
T  8566017 tcattgatagtggattggagagatcaatctctcacccagattaggtca-agttggaccgaactag 8565954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 514 - 554
Target Start/End: Complemental strand, 16641004 - 16640964
Alignment:
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  16641004 tagtggattggagagatcaatctctcctccagagtaggtca 16640964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 514 - 554
Target Start/End: Original strand, 19806467 - 19806507
Alignment:
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  19806467 tagtggattggagagatcaatctctcccccagattaggtca 19806507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 458 - 554
Target Start/End: Complemental strand, 42426354 - 42426259
Alignment:
Q  458 ttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||| ||| |||||| ||| ||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||| | || |||||||    
T  42426354 ttgttgaagctaatttcttgcaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctccccctgattaggtca 42426259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 554
Target Start/End: Original strand, 5058142 - 5058189
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| |||||||||||||||||||||||||||   |||||||||||    
T  5058142 tcattgatagtggattggagagatcaatctctcctctagagtaggtca 5058189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 554
Target Start/End: Complemental strand, 9789295 - 9789248
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||||||||||||||| |||||||||||  ||||||||||||    
T  9789295 tcattgatagtggattggagagttcaatctctcctccagagtaggtca 9789248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 554
Target Start/End: Original strand, 26170859 - 26170906
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||||||||||||||| |||||||||||  ||||||||||||    
T  26170859 tcattgatagtggattggagagttcaatctctcctccagagtaggtca 26170906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 554
Target Start/End: Original strand, 26177979 - 26178026
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||||||||||||||| |||||||||||  ||||||||||||    
T  26177979 tcattgatagtggattggagagttcaatctctcctccagagtaggtca 26178026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 504 - 554
Target Start/End: Complemental strand, 3075732 - 3075682
Alignment:
Q  504 aattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||| ||| ||||| |||||||||||||||||||||| || |||||||||    
T  3075732 aattcgttgatagtgaattggagagatcaatctctccctcatagtaggtca 3075682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 550
Target Start/End: Complemental strand, 42310055 - 42309963
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtag 550  Q
    |||||| ||| |||||| |||||||  ||||| ||||||||| || || || |||| ||||||||| | |||||||||||||||| || |||||    
T  42310055 cttgttgaagctaatttcttgtaactcttttgtatctctttgtaagaactt-attgatagtggattagcgagatcaatctctcccccatagtag 42309963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 423 - 586
Target Start/End: Complemental strand, 14689581 - 14689421
Alignment:
Q  423 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 522  Q
    |||| ||||||||||||  ||||| | || ||  |||||| ||| |||||| ||||||  |||||| ||||||||| ||  |||| |||| ||||| |||    
T  14689581 aaaattggtagaaattatgtttgttcatggagtgcttgttgaagctaattttttgtaatatttttgtatctctttgtaaataatttattgttagtgaatt 14689482  T
Q  523 ggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaaacaattcttt 586  Q
     || |||||  ||||| || ||| ||| |||||||||| || ||||||| | ||||||||||||    
T  14689481 tgatagatc--tctcttcctcagggtatgtcattgttggactgaactaggt-aaacaattcttt 14689421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 430 - 498
Target Start/End: Original strand, 35616190 - 35616258
Alignment:
Q  430 gtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttg 498  Q
    ||||||||||| ||||| |||| ||| || ||| |||||||||| |||||||| ||||| || ||||||    
T  35616190 gtagaaattaggtttgttcttggagagctcgtttaagttaatttcttgtaacccttttgtatttctttg 35616258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 6e-23; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 5406362 - 5406224
Alignment:
Q  415 gagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggt 514  Q
    |||||||| |||||||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| ||||||||| || || | ||||| |    
T  5406362 gagattgggaaaatggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgtaagaact-cattgat 5406264  T
Q  515 agtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  5406263 agtggattggagagatcaatctctcctccagagtaggtca 5406224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 5410687 - 5410549
Alignment:
Q  415 gagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggt 514  Q
    |||||||| |||||||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| ||||||||| || || | ||||| |    
T  5410687 gagattgggaaaatggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgtaagaact-cattgat 5410589  T
Q  515 agtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  5410588 agtggattggagagatcaatctctcctccagagtaggtca 5410549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 392 - 539
Target Start/End: Original strand, 25073551 - 25073698
Alignment:
Q  392 attgagtgtcttatttatggaaggagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcat 491  Q
    ||||||| |||| || |||| ||||||||| |||||||||||||||||||||| | |||   || |||||||||| || |||||||||||| ||||| ||    
T  25073551 attgagtatcttgttcatgggaggagattgaaaaaatggtagaaattagatttattcttcgtgagcttgttaaagctattttattgtaacccttttgtat 25073650  T
Q  492 ctctttgaaacaaattcattggtagtggattggagagatcaatctctc 539  Q
    |||| || ||  || |||||| ||||||||| |||| |||||||||||    
T  25073651 ctctatgtaaagaactcattgatagtggattagagaaatcaatctctc 25073698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 415 - 551
Target Start/End: Complemental strand, 31404837 - 31404702
Alignment:
Q  415 gagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggt 514  Q
    |||||||| |||||||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| ||||||||| || || | ||||| |    
T  31404837 gagattgggaaaatggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgtaagaact-cattgat 31404739  T
Q  515 agtggattggagagatcaatctctcccacagagtagg 551  Q
    ||||||||||||||||||||||||||  |||||||||    
T  31404738 agtggattggagagatcaatctctcctccagagtagg 31404702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 5413556 - 5413418
Alignment:
Q  415 gagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggt 514  Q
    |||||||| |||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| ||||||||| || || | ||||| |    
T  5413556 gagattgggaaaaaggtagaaattagggttgttctttgcgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgtaagaact-cattgat 5413458  T
Q  515 agtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  5413457 agtggattggagagatcaatctctcctccagagtaggtca 5413418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 382 - 552
Target Start/End: Original strand, 4045396 - 4045566
Alignment:
Q  382 agtgaaaagtattgagtgtcttatttatggaaggagattggaaaaatggtagaaattaga-tttgtgcttgaagatcttgttaaagttaatttattgtaa 480  Q
    ||||||||  |||||||||||| ||||| | || ||||||| |||||||||||||||||  ||||| ||| | || |||||| ||| |||||| ||||||    
T  4045396 agtgaaaatcattgagtgtcttgtttattggag-agattgggaaaatggtagaaattagggtttgttctttatgagcttgttgaagctaatttcttgtaa 4045494  T
Q  481 cctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggt 552  Q
     | ||||  ||||||||| ||  || |||||| ||||||||||||||||||||| ||| || || |||||||    
T  4045495 tcattttatatctctttgtaaataactcattgatagtggattggagagatcaatttctaccccaaagtaggt 4045566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 415 - 565
Target Start/End: Complemental strand, 22424990 - 22424839
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacc--tttttgcatctctttgaaacaaattcatt 511  Q
    |||||||||||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||||| ||||||||| || || | ||||    
T  22424990 gagattggaaaaatgggtagaaattagggttgttctttgtgagcttgtttaagctaatttcttgtaacccatttttgtatctctttgtaagaact-catt 22424892  T
Q  512 ggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccg 565  Q
      |||||||||||||||||||||||||||  |||||||||||||||||| ||||    
T  22424891 a-tagtggattggagagatcaatctctccttcagagtaggtcattgttggaccg 22424839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 2973102 - 2972963
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| |||||||||| ||||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | |||||     
T  2973102 gagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattga 2973004  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||   |||||||||||    
T  2973003 tagtggattggagagatcaatctctcctcaagagtaggtca 2972963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 415 - 554
Target Start/End: Original strand, 21588936 - 21589075
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | |||||     
T  21588936 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattga 21589034  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  21589035 tagtggattggagagatcaatctctcctccagagtaggtca 21589075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 415 - 554
Target Start/End: Original strand, 21593669 - 21593808
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | |||||     
T  21593669 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattga 21593767  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  21593768 tagtggattggagagatcaatctctcctccagagtaggtca 21593808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 26830286 - 26830147
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||||||||||| ||||||||||| |||| |||   || |||||| ||| |||||| |||||| |  |||| ||||||||| || || | |||||     
T  26830286 gagattggaaaaatgggtagaaattagagttgttctttgtgagcttgttgaagctaatttcttgtaatccatttgtatctctttgtaagaact-cattga 26830188  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||  || |||||||||    
T  26830187 tagtggattggagagatcaatctctcctccaaagtaggtca 26830147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 430 - 569
Target Start/End: Original strand, 5043648 - 5043786
Alignment:
Q  430 gtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagaga 529  Q
    ||||||||||| ||||| |||   || |||||| ||| |||||| |||||||   |||| ||||||||| || || | ||||| |||| |||||||||||    
T  5043648 gtagaaattaggtttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaact-cattgatagtagattggagaga 5043746  T
Q  530 tcaatctctcccacagagtaggtcattgttgtaccgaact 569  Q
    |||||||||||  || ||||||||||||||| ||||||||    
T  5043747 tcaatctctcctccatagtaggtcattgttggaccgaact 5043786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 514 - 569
Target Start/End: Original strand, 26800691 - 26800746
Alignment:
Q  514 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaact 569  Q
    |||||||||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  26800691 tagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 26800746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 423 - 554
Target Start/End: Complemental strand, 30834690 - 30834560
Alignment:
Q  423 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 522  Q
    ||||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| ||||||||| || || | ||||| |||||||||    
T  30834690 aaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttggaagaact-cattgatagtggatt 30834592  T
Q  523 ggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| |||||||||||  ||||||||||||    
T  30834591 ggagagttcaatctctcctccagagtaggtca 30834560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 415 - 571
Target Start/End: Complemental strand, 3808872 - 3808715
Alignment:
Q  415 gagattggaaaaat-ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacct-ttttgcatctctttgaaacaaattcattg 512  Q
    |||||||| ||||| ||||||||||||  |||| |||   || |||||| ||  |||||| ||||||||  ||||| ||||||||| || || | |||||    
T  3808872 gagattgggaaaataggtagaaattagggttgttctttgtgagcttgttgaaactaatttcttgtaacccattttgtatctctttgtaagaact-cattg 3808774  T
Q  513 gtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactag 571  Q
     |||||||||||||||||||||||||||  |||||||||||||  ||| ||||||||||    
T  3808773 atagtggattggagagatcaatctctcctccagagtaggtcatgattggaccgaactag 3808715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 421 - 554
Target Start/End: Complemental strand, 2171687 - 2171556
Alignment:
Q  421 ggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtgga 520  Q
    ||||||||||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||| | ||||||||| || || | ||||| |||||||    
T  2171687 ggaaaaatggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttt-gtatctctttgtaagaact-cattgatagtgga 2171590  T
Q  521 ttggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||| |||||||||||  ||||||||||||    
T  2171589 ttggagagttcaatctctcctccagagtaggtca 2171556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 457 - 554
Target Start/End: Complemental strand, 28137528 - 28137432
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||| |||||| ||||||||  |||| || |||||| || || | ||||| |||||||||||||||||||||||||||| ||||||||||||    
T  28137528 cttgtttaagctaatttcttgtaacccatttgtatttctttgtaagaact-cattgatagtggattggagagatcaatctctcccccagagtaggtca 28137432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 423 - 549
Target Start/End: Complemental strand, 33160506 - 33160381
Alignment:
Q  423 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 522  Q
    ||||| ||||||||||||| |||| |||   || ||||| |||| |||||| |||||||  ||||| ||||||||| || || | ||||| | |||||||    
T  33160506 aaaaaaggtagaaattagagttgttctttgtgaacttgtcaaagctaatttcttgtaactcttttgtatctctttgtaagaact-cattgatggtggatt 33160408  T
Q  523 ggagagatcaatctctcccacagagta 549  Q
    ||||||||||||||||||  |||||||    
T  33160407 ggagagatcaatctctcctccagagta 33160381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 507 - 571
Target Start/End: Complemental strand, 26954357 - 26954294
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactag 571  Q
    |||||| |||||||||||||||||||||||||||| || |||||||||  |||| ||||||||||    
T  26954357 tcattgatagtggattggagagatcaatctctcccccaaagtaggtca-agttggaccgaactag 26954294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 507 - 554
Target Start/End: Complemental strand, 5409140 - 5409093
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| |||||||||||||||||||||||||||  ||||||||||||    
T  5409140 tcattgatagtggattggagagatcaatctctcctccagagtaggtca 5409093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 423 - 554
Target Start/End: Complemental strand, 16452483 - 16452353
Alignment:
Q  423 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 522  Q
    ||||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| |||   ||||||||| || || | ||||| |||||||||    
T  16452483 aaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaaccctttcatatctctttggaagaact-cattgatagtggatt 16452385  T
Q  523 ggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| |||||||||||  ||||||||||||    
T  16452384 ggagagttcaatctctcctccagagtaggtca 16452353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 415 - 537
Target Start/End: Original strand, 17758028 - 17758150
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | |||||     
T  17758028 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattga 17758126  T
Q  514 tagtggattggagagatcaatctc 537  Q
    ||||||||||||||||||||||||    
T  17758127 tagtggattggagagatcaatctc 17758150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 458 - 540
Target Start/End: Complemental strand, 9183150 - 9183069
Alignment:
Q  458 ttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcc 540  Q
    ||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||    
T  9183150 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcc 9183069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 517 - 554
Target Start/End: Complemental strand, 33211246 - 33211209
Alignment:
Q  517 tggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  33211246 tggattggagagatcaatctctcccccagagtaggtca 33211209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 554
Target Start/End: Complemental strand, 6097522 - 6097475
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||||||||||||||| |||||||||||  ||||||||||||    
T  6097522 tcattgatagtggattggagagttcaatctctcctccagagtaggtca 6097475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 554
Target Start/End: Original strand, 16569119 - 16569166
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| |||||||||||||||||||||||||||  |||| |||||||    
T  16569119 tcattgatagtggattggagagatcaatctctcctccagattaggtca 16569166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 554
Target Start/End: Complemental strand, 603208 - 603112
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | | ||| |||||||||||||| |||||||||||||  ||| |||||||    
T  603208 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cgttgatagtggattggagaaatcaatctctccccaagattaggtca 603112  T

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Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 514 - 554
Target Start/End: Complemental strand, 3038967 - 3038927
Alignment:
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||||||||||||||| |||||||||| |||| |||||||    
T  3038967 tagtggattggagagattaatctctcccccagattaggtca 3038927  T

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Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 507 - 571
Target Start/End: Original strand, 17763087 - 17763151
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactag 571  Q
    |||||| ||||||||||||| |||||||||||||  |||||||| |||   ||| ||||||||||    
T  17763087 tcattgatagtggattggagtgatcaatctctcctccagagtagatcaagtttggaccgaactag 17763151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 443 - 576
Target Start/End: Complemental strand, 27577 - 27444
Alignment:
Q  443 ttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctccca 542  Q
    |||| |||||||| |||||| ||| |||||| |||||||   |||| ||||||||| ||  || | |||| ||||||||||||||||||||||||||||     
T  27577 ttgttcttgaagagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaaataacttattgatagtggattggagagatcaatctctcccc 27478  T
Q  543 cagagtaggtcattgttgtaccgaactagataaa 576  Q
    || ||||||||||||||| |||||| ||| ||||    
T  27477 catagtaggtcattgttggaccgaattaggtaaa 27444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 52; Significance: 2e-20; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 415 - 554
Target Start/End: Original strand, 45095169 - 45095307
Alignment:
Q  415 gagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggt 514  Q
    |||||||| |||||||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| ||||||||| || || | ||||| |    
T  45095169 gagattgggaaaatggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgtaagaact-cattgat 45095267  T
Q  515 agtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||||||||||||||||||||||||   |||||||||||    
T  45095268 agtggattggagagatcaatctctcctctagagtaggtca 45095307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 470 - 569
Target Start/End: Complemental strand, 55302079 - 55301981
Alignment:
Q  470 atttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaact 569  Q
    |||| ||||||||| |||| ||||||||| || || ||||||| |||||||||||||||||||||||||||  || ||||||||||||||| ||||||||    
T  55302079 atttcttgtaacctatttgtatctctttgtaagaa-ttcattgatagtggattggagagatcaatctctcctccatagtaggtcattgttggaccgaact 55301981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 423 - 573
Target Start/End: Original strand, 46173371 - 46173519
Alignment:
Q  423 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 522  Q
    |||| |||||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || ||||||| |||||||||    
T  46173371 aaaattggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaa-ttcattgatagtggatt 46173469  T
Q  523 ggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagat 573  Q
    ||||||||||||||||||| |||| |||||||  |||| ||||||||||||    
T  46173470 ggagagatcaatctctcccccagattaggtca-agttggaccgaactagat 46173519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 429 - 567
Target Start/End: Original strand, 46860494 - 46860631
Alignment:
Q  429 ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagag 528  Q
    |||||||||||| ||||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||    
T  46860494 ggtagaaattaggtttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaataact-cattgatagtggattggagag 46860592  T
Q  529 atcaatctctcccacagagtaggtcattgttgtaccgaa 567  Q
    |||||||| |||  |||||||||||||||||| ||||||    
T  46860593 atcaatctttcctccagagtaggtcattgttggaccgaa 46860631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 415 - 569
Target Start/End: Complemental strand, 4055926 - 4055773
Alignment:
Q  415 gagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacct-ttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| |||  |||||||||||| || || |||| ||| ||||| ||||||||||| ||||||||| ||||| ||||||||| || ||| ||||||     
T  4055926 gagattgggaaatgggtagaaattaggtt-gttcttggagaacttgtaaaagttaatttcttgtaacctcttttgtatctctttgtaagaaactcattga 4055828  T
Q  514 tagtggattggagagatcaatctctcccacaga-gtaggtcattgttgtaccgaact 569  Q
    |||||||||| |||||||  |||||||| |||| ||||||||||||||  |||||||    
T  4055827 tagtggattgaagagatc--tctctcccccagatgtaggtcattgttgggccgaact 4055773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 415 - 571
Target Start/End: Original strand, 30236130 - 30236285
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||| |||| ||||||||| || || | |||||     
T  30236130 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacctatttgtatctctttgtaagaact-cattga 30236228  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactag 571  Q
    |||||||||||||||||||||||||||| |||| |||||||  |||| ||||||||||    
T  30236229 tagtggattggagagatcaatctctcccccagattaggtca-agttggaccgaactag 30236285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 374 - 567
Target Start/End: Complemental strand, 35138909 - 35138717
Alignment:
Q  374 cttgggaaagtgaaaagtattgagtgtcttatttatggaaggagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaattt 473  Q
    ||||||| ||||||||  |||||||||||| || |||||| |||||||  |||  |||||||||||  ||||| ||||  ||  ||||| ||||||||||    
T  35138909 cttgggagagtgaaaatcattgagtgtcttgttcatggaaagagattgagaaatgggtagaaattatgtttgttcttggtgagtttgttgaagttaattt 35138810  T
Q  474 attgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaa 567  Q
     ||| |||  ||||| ||||||||| ||  || |||||| |||||||| | ||||| ||||||| |||| | ||||||||||||||| ||||||    
T  35138809 cttgcaactcttttgtatctctttgtaaagaactcattgatagtggatggaagagaacaatctccccca-aaagtaggtcattgttgaaccgaa 35138717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 392 - 576
Target Start/End: Original strand, 20937639 - 20937822
Alignment:
Q  392 attgagtgtcttatttatggaaggagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcat 491  Q
    ||||||| |||| || || ||| ||||| ||||||  |||||||||||  |||||  ||| ||| |||||| |||||||||| |||||||| ||||| ||    
T  20937639 attgagtctcttgttcatagaaagagatcggaaaataggtagaaattatgtttgtttttggagagcttgttgaagttaatttcttgtaacccttttgtat 20937738  T
Q  492 ctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaa 576  Q
    ||||||||||  || |||||| || | |||||||||||||||||  |||| || |||| ||||| |||| || ||||||| ||||    
T  20937739 ctctttgaaaagaactcattgata-tagattggagagatcaatcgttcccccaaagtatgtcatagttggacagaactaggtaaa 20937822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 415 - 569
Target Start/End: Original strand, 29813068 - 29813221
Alignment:
Q  415 gagattggaaaaat-ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||||||||| ||||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||||||||||||| || || | ||||      
T  29813068 gagattggaaaaataggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgcatctctttgtaagaact-cattta 29813166  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaact 569  Q
    |||||||||||||||||||||||||||| |||| | ||||| ||||| ||||||||    
T  29813167 tagtggattggagagatcaatctctcccccagatttggtca-tgttggaccgaact 29813221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 382 - 554
Target Start/End: Original strand, 7762238 - 7762409
Alignment:
Q  382 agtgaaaagtattgagtgtcttatttatggaaggagattg-gaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaa 480  Q
    ||||||||  ||||||||||||||| || |  | |||||| |||||| ||||||||||||  |||| |||   || |||||| ||| |||||| ||||||    
T  7762238 agtgaaaatcattgagtgtcttattcattggtg-agattgagaaaaagggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaa 7762336  T
Q  481 cctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |  ||||| ||||||||| || || | ||||| |||||||||||||||||||||||||||  ||||||||||||    
T  7762337 ctcttttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcctccagagtaggtca 7762409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 421 - 554
Target Start/End: Complemental strand, 23200294 - 23200162
Alignment:
Q  421 ggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtgga 520  Q
    ||||||||||||||||||||| |||| |||   || ||||| |||| |||||| |||||||| ||||| |||| |||| ||  || |||||| ||||| |    
T  23200294 ggaaaaatggtagaaattagagttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctttttgtaa-gaactcattgatagtgaa 23200196  T
Q  521 ttggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||| |||||||||||  ||||||||||||    
T  23200195 ttggagagttcaatctctcctccagagtaggtca 23200162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 421 - 554
Target Start/End: Original strand, 37408470 - 37408602
Alignment:
Q  421 ggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtgga 520  Q
    ||||||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| ||||||||| || || | ||||| |||||||    
T  37408470 ggaaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgtaagaact-cattgatagtgga 37408568  T
Q  521 ttggagagatcaatctctcccacagagtaggtca 554  Q
    ||| ||||||||||||||||  ||||||||||||    
T  37408569 ttgaagagatcaatctctcctccagagtaggtca 37408602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 457 - 554
Target Start/End: Original strand, 40735431 - 40735527
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||| |||||||||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||| |||| |||||||    
T  40735431 cttgttgaagctaatttattgtaaccagtttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcccccagattaggtca 40735527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 19684052 - 19683913
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| ||||||||| || || | |||||     
T  19684052 gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgtaagaact-cattga 19683954  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||  || |||||||||    
T  19683953 tagtggattggagagatcaatctctcctccatagtaggtca 19683913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 430 - 554
Target Start/End: Original strand, 29810889 - 29811012
Alignment:
Q  430 gtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagaga 529  Q
    |||||||||||| |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| ||||||||||||||||    
T  29810889 gtagaaattagagttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagaga 29810987  T
Q  530 tcaatctctcccacagagtaggtca 554  Q
    |||||||||||| |||| |||||||    
T  29810988 tcaatctctcccccagattaggtca 29811012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 464 - 554
Target Start/End: Complemental strand, 6095712 - 6095623
Alignment:
Q  464 aagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||  ||||||||||||    
T  6095712 aagttaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcctccagagtaggtca 6095623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 424 - 554
Target Start/End: Original strand, 7764479 - 7764608
Alignment:
Q  424 aaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattg 523  Q
    |||| ||||||||||||  |||| |||   || |||||||||| |||||| |||||||  ||||| ||||||||| || || | ||||| ||||||||||    
T  7764479 aaaagggtagaaattagggttgttctttgtgaacttgttaaagctaatttcttgtaactcttttgtatctctttgtaagaact-cattgatagtggattg 7764577  T
Q  524 gagagatcaatctctcccacagagtaggtca 554  Q
    ||||||| |||||||||  ||||||||||||    
T  7764578 gagagatgaatctctcctccagagtaggtca 7764608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 421 - 554
Target Start/End: Complemental strand, 23198095 - 23197963
Alignment:
Q  421 ggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtgga 520  Q
    ||||||||||||||||||||| ||||  ||   || ||||| |||| |||||| |||||||| ||||| |||| |||| || || | ||||| ||||| |    
T  23198095 ggaaaaatggtagaaattagagttgttttttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctttttgtaagaact-cattgatagtgaa 23197997  T
Q  521 ttggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||| |||||||||||  ||||||||||||    
T  23197996 ttggagagttcaatctctcctccagagtaggtca 23197963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 457 - 554
Target Start/End: Original strand, 54593752 - 54593848
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||| |||||||||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||  ||||||| ||||    
T  54593752 cttgttgaagctaatttattgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcctccagagtatgtca 54593848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 415 - 554
Target Start/End: Original strand, 760852 - 760991
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| |||||||||| | ||| |||   || |||||| ||| |||||| ||||||||  |||| ||| ||||| || || | |||||     
T  760852 gagattgggaaaatgggtagaaattaggtctgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttgtaagaact-cattga 760950  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  760951 tagtggattggagagatcaatctctcccccagattaggtca 760991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 415 - 554
Target Start/End: Original strand, 34491217 - 34491356
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| |||||||   |||| ||||||||| || || | |||||     
T  34491217 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaact-cattga 34491315  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  34491316 tagtggattggagagatcaatctctcctccagagtaggtca 34491356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 457 - 569
Target Start/End: Complemental strand, 4075592 - 4075480
Alignment:
Q  457 cttgttaaagttaatttattgtaacct-ttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacaga-gtaggtca 554  Q
    ||||| ||||||||||| ||||||||| ||||| ||| ||||| || ||| || ||| |||||||||||||||||||  ||||||| |||| ||||||||    
T  4075592 cttgtaaaagttaatttcttgtaacctcttttgtatcactttgtaagaaactctttgatagtggattggagagatca--ctctcccccagatgtaggtca 4075495  T
Q  555 ttgttgtaccgaact 569  Q
    ||||||  |||||||    
T  4075494 ttgttgggccgaact 4075480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 423 - 554
Target Start/End: Complemental strand, 5258298 - 5258168
Alignment:
Q  423 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 522  Q
    ||||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| ||||||||| || || | ||||| |||||||||    
T  5258298 aaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttggaagaact-cattgatagtggatt 5258200  T
Q  523 ggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||||||||| |  ||||||||||||    
T  5258199 ggagagttcaatctcttctccagagtaggtca 5258168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 415 - 540
Target Start/End: Complemental strand, 22835165 - 22835040
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| |||||||||| ||||| |||   || |||||| ||| |||||| ||||||||  |||| ||| ||||| || || | |||||     
T  22835165 gagattgggaaaatgggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttgtaacccatttgtatccctttgtaagaact-cattga 22835067  T
Q  514 tagtggattggagagatcaatctctcc 540  Q
    |||||||||||||||||||||||||||    
T  22835066 tagtggattggagagatcaatctctcc 22835040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 507 - 569
Target Start/End: Complemental strand, 43403815 - 43403753
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaact 569  Q
    |||||| ||||||||||||||||| |||||||||  ||||||||||||| |||| ||||||||    
T  43403815 tcattgatagtggattggagagattaatctctcctccagagtaggtcatggttggaccgaact 43403753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 429 - 554
Target Start/End: Original strand, 9581302 - 9581426
Alignment:
Q  429 ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagag 528  Q
    |||||||||||| ||||| |||   || |||||| ||| |||||| || |||||  |||| ||| ||||| || || | ||||| |||||||||||||||    
T  9581302 ggtagaaattaggtttgttctttgtgagcttgtttaagctaatttcttttaacccatttgtatccctttgtaagaact-cattgatagtggattggagag 9581400  T
Q  529 atcaatctctcccacagagtaggtca 554  Q
    ||||||||||||  ||||||||||||    
T  9581401 atcaatctctcctccagagtaggtca 9581426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 507 - 552
Target Start/End: Original strand, 16499126 - 16499171
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggt 552  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||    
T  16499126 tcattgatagtggattggagagatcaatctctcccccagagtaggt 16499171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 457 - 554
Target Start/End: Original strand, 44331593 - 44331689
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||| |||||| |||||| |  |||| ||||||||| || || || |||| |||||||||||||||||||||||||||| |||| |||||||    
T  44331593 cttgttgaagctaatttcttgtaagccatttgtatctctttgtaagaactt-attgatagtggattggagagatcaatctctcccccagattaggtca 44331689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 457 - 569
Target Start/End: Complemental strand, 49199590 - 49199478
Alignment:
Q  457 cttgttaaagttaatttattgtaacct-ttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcat 555  Q
    |||||| ||| |||||| ||||||||  ||||| ||||||||| || || | ||||| ||||||||||||||||| |||||||||  |||| ||||||||    
T  49199590 cttgttgaagctaatttcttgtaacccattttgtatctctttgtaagaact-cattgatagtggattggagagattaatctctcctccagactaggtcat 49199492  T
Q  556 tgttgtaccgaact 569  Q
     |||| ||||||||    
T  49199491 ggttggaccgaact 49199478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 382 - 554
Target Start/End: Original strand, 51398787 - 51398958
Alignment:
Q  382 agtgaaaagtattgagtgtcttatttatggaaggagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaa 480  Q
    ||||||||  |||||||||||| || || || | ||||||||||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||    
T  51398787 agtgaaaatcattgagtgtcttgttcattgatg-agattggaaaaatgggtagaaattagggttgttcttagtgaacttgttgaagctaatttcttgtaa 51398885  T
Q  481 cctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |   |||| ||||||||| || || | ||||| |||||||||||||||||  ||||||||| |||| |||||||    
T  51398886 ctcatttgtatctctttgtaagaact-cattgatagtggattggagagatttatctctcccccagattaggtca 51398958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 569
Target Start/End: Complemental strand, 43401965 - 43401810
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaac-ctttttgcatctctttgaaacaaattcattg 512  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||| | ||||  ||||||||| || || | |||||    
T  43401965 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacgcattttttatctctttgtaagaact-cattg 43401867  T
Q  513 gtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaact 569  Q
     |||||||||||||| || |||||||||  ||||||||||||| |||| ||||||||    
T  43401866 atagtggattggagaaattaatctctcctccagagtaggtcatggttggaccgaact 43401810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 550
Target Start/End: Complemental strand, 53921666 - 53921531
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||||||||||| |||||||||| |||||  ||   || |||||||||| |||||| |||||||   |||| |||  |||| || || | |||||     
T  53921666 gagattggaaaaatgggtagaaattaggtttgttgtttgtgagcttgttaaagctaatttcttgtaactcatttgtatcattttgtaagaact-cattga 53921568  T
Q  514 tagtggattggagagatcaatctctcccacagagtag 550  Q
    |||||||||||||||||||||||||||| | ||||||    
T  53921567 tagtggattggagagatcaatctctcccccggagtag 53921531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 423 - 538
Target Start/End: Complemental strand, 5260477 - 5260363
Alignment:
Q  423 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 522  Q
    ||||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| ||||||||| || || | ||||| |||||||||    
T  5260477 aaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttggaagaact-cattgatagtggatt 5260379  T
Q  523 ggagagatcaatctct 538  Q
    |||||| |||||||||    
T  5260378 ggagagttcaatctct 5260363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 514 - 569
Target Start/End: Complemental strand, 41819587 - 41819532
Alignment:
Q  514 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaact 569  Q
    |||||||||||||| ||||||||||||  |||||||||||||||||| ||| ||||    
T  41819587 tagtggattggagacatcaatctctcctccagagtaggtcattgttggaccaaact 41819532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 458 - 541
Target Start/End: Complemental strand, 44700597 - 44700515
Alignment:
Q  458 ttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctccc 541  Q
    ||||| ||| |||||| ||||||||| |||| ||||||||| || || | | ||| ||||||||||||||||||||||||||||    
T  44700597 ttgttgaagctaatttcttgtaacctatttgtatctctttgtaagaact-ctttgatagtggattggagagatcaatctctccc 44700515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 575
Target Start/End: Original strand, 32891152 - 32891268
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 556  Q
    |||||| ||| |||||| |||||||   |||| ||||||||| || || | | ||| ||||||||||||||||| |||||||||| | |||||||||| |    
T  32891152 cttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaact-cgttgatagtggattggagagataaatctctcccccggagtaggtca-t 32891249  T
Q  557 gttgtaccgaactagataa 575  Q
    |||| |||||||| |||||    
T  32891250 gttggaccgaactggataa 32891268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 396 - 567
Target Start/End: Complemental strand, 26323255 - 26323082
Alignment:
Q  396 agtgtcttatttatggaaggagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctct 495  Q
    |||||||| || |||| | |||||||  |||| |||| ||||||| |||||  |||||||  ||||| ||| |||||| |||||||||||||| || |||    
T  26323255 agtgtcttgttcatgggatgagattgagaaaagggtaaaaattaggtttgtttttgaagagtttgttgaagctaatttcttgtaacctttttgtatatct 26323156  T
Q  496 ttgaaacaaattcattggtagtggattggagagatc-aatctctcccac-agagtaggtcattgttgtaccgaa 567  Q
    | | || ||| |||||| ||||| | |||||| |||  || | |||| | ||||||||||||||||| ||||||    
T  26323155 tggtaaaaaactcattgatagtgaagtggagatatcttatttatccccctagagtaggtcattgttggaccgaa 26323082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 457 - 554
Target Start/End: Complemental strand, 29196506 - 29196410
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||| |||| |||||| ||| ||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||| || | |||||||    
T  29196506 cttgtcaaagctaatttcttggaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcccccaaattaggtca 29196410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 514 - 554
Target Start/End: Original strand, 40913397 - 40913437
Alignment:
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  40913397 tagtggattggagagatcaatctctcccccagattaggtca 40913437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 516 - 559
Target Start/End: Complemental strand, 5433944 - 5433901
Alignment:
Q  516 gtggattggagagatcaatctctcccacagagtaggtcattgtt 559  Q
    |||||||||||||||||||||||||  || ||||||||||||||    
T  5433944 gtggattggagagatcaatctctcctccatagtaggtcattgtt 5433901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 554
Target Start/End: Complemental strand, 7780075 - 7780028
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||||||||||||||| |||||||||||  ||||||||||||    
T  7780075 tcattgatagtggattggagagttcaatctctcctccagagtaggtca 7780028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 415 - 541
Target Start/End: Original strand, 29682364 - 29682490
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| |||||||||  ||||| |||   || |||||| ||| |||||| |||| |||  |||| ||| ||||| || || | |||||     
T  29682364 gagattgggaaaatgggtagaaattatgtttgttctttgtgagcttgtttaagctaatttcttgtcacccatttgtatccctttgtaagaact-cattga 29682462  T
Q  514 tagtggattggagagatcaatctctccc 541  Q
    ||||||||||||||||||||||||||||    
T  29682463 tagtggattggagagatcaatctctccc 29682490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 554
Target Start/End: Complemental strand, 39153432 - 39153385
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| |||||||||||||||| ||||||||||| |||| |||||||    
T  39153432 tcattgatagtggattggagagaacaatctctcccccagattaggtca 39153385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 554
Target Start/End: Original strand, 40734595 - 40734642
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| |||||||||||||||||||||||||||| || | |||||||    
T  40734595 tcattgatagtggattggagagatcaatctctcccccaaattaggtca 40734642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 554
Target Start/End: Original strand, 47304348 - 47304395
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||||||||||||||||||||||||||||  ||| |||||||    
T  47304348 tcattgatagtggattggagagatcaatctctccccaagattaggtca 47304395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 468 - 554
Target Start/End: Complemental strand, 9636235 - 9636150
Alignment:
Q  468 taatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| |||||||| ||||| |||| |||| || || | ||||| ||||||||||||||| |||||||||||  || |||||||||    
T  9636235 taatttcttgtaacccttttgtatctttttgtaagaact-cattgatagtggattggagagttcaatctctcctccaaagtaggtca 9636150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 509 - 554
Target Start/End: Complemental strand, 2075144 - 2075099
Alignment:
Q  509 attggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||| ||||||||| ||||||||||||||||||  |||||||||||    
T  2075144 attgatagtggatttgagagatcaatctctccccgagagtaggtca 2075099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 552
Target Start/End: Original strand, 4570049 - 4570094
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggt 552  Q
    |||||| ||||||||||||||||||||||||| |  ||||||||||    
T  4570049 tcattgatagtggattggagagatcaatctctactccagagtaggt 4570094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 560
Target Start/End: Original strand, 33191928 - 33191980
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttg 560  Q
    |||||| ||||||||| |||||||||||||||| | ||||| ||||||||||||    
T  33191928 tcattgatagtggattagagagatcaatctctctc-cagaggaggtcattgttg 33191980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 5236619 - 5236481
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | |||||     
T  5236619 gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattga 5236521  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    || |||||| ||||||||||||| |||| |||| |||||||    
T  5236520 taatggattcgagagatcaatctttccc-cagattaggtca 5236481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 430 - 498
Target Start/End: Complemental strand, 8166604 - 8166536
Alignment:
Q  430 gtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttg 498  Q
    ||||||||||| ||||| |||| |||  ||||| |||||||| | || ||||||||||| |||||||||    
T  8166604 gtagaaattaggtttgttcttggagagtttgttgaagttaatatcttataacctttttgtatctctttg 8166536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 514 - 554
Target Start/End: Complemental strand, 27305774 - 27305734
Alignment:
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||  || |||||||||    
T  27305774 tagtggattggagagatcaatctctcctccaaagtaggtca 27305734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 454 - 554
Target Start/End: Original strand, 31314490 - 31314589
Alignment:
Q  454 gatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtc 553  Q
    ||||||||| ||| |||||| ||||||||  |||| |||| |||| || || | | ||| ||||||||||||||||||||| |||||| || | ||||||    
T  31314490 gatcttgttgaagctaatttcttgtaacccatttgtatctttttgtaagaact-ctttgatagtggattggagagatcaatatctcccccatattaggtc 31314588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 392 - 541
Target Start/End: Original strand, 5116587 - 5116736
Alignment:
Q  392 attgagtgtcttatttatggaaggagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcat 491  Q
    ||||||| |||| ||||||| |||||||| | ||||  ||||||||||| ||||| |||| | |  ||||| ||| ||||||||||||| | ||||| ||    
T  5116587 attgagtctcttgtttatgggaggagattaggaaaagagtagaaattaggtttgttcttggatagtttgttgaagataatttattgtaaaccttttgtat 5116686  T
Q  492 ctctttgaaacaaattcattggtagtggattggagagatcaatctctccc 541  Q
    ||||||| ||  || |||||| ||||| ||||||||||| ||||||||||    
T  5116687 ctctttgtaaagaactcattgatagtgaattggagagataaatctctccc 5116736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 457 - 569
Target Start/End: Complemental strand, 22328511 - 22328399
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 556  Q
    |||||| ||| |||||| |||||||  ||||| ||||||||| ||  || |||||  ||||||||| ||||||||||||||||||  |||||||||||||    
T  22328511 cttgttgaagctaatttcttgtaactcttttgtatctctttgcaaggaagtcattaatagtggatttgagagatcaatctctcccctagagtaggtcatt 22328412  T
Q  557 gttgtaccgaact 569  Q
    |||| ||||||||    
T  22328411 gttggaccgaact 22328399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 415 - 554
Target Start/End: Original strand, 48491584 - 48491723
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| |||||||||||| || | |||||     
T  48491584 gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgaaagaact-cattga 48491682  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  48491683 tagtggattggagagatcaatctctcccccagattaggtca 48491723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 415 - 569
Target Start/End: Complemental strand, 3904780 - 3904626
Alignment:
Q  415 gagattggaaaaatggtagaaattagattt-gtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||||||||||||| ||| || |||  ||| | | || ||  |||||| |||||||  ||||||||||||||| ||  || ||||||     
T  3904780 gagattgggaaaatggtagaaattaggttttgttctttgagagcctattgaatgtaatttcttgtaacacttttgcatctctttgtaaagaactcattga 3904681  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaact 569  Q
    ||||| ||  |||||||||||||||||| |||||||||||||||||| ||||||||    
T  3904680 tagtg-atcagagagatcaatctctccctcagagtaggtcattgttggaccgaact 3904626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 418 - 576
Target Start/End: Complemental strand, 4253689 - 4253531
Alignment:
Q  418 attggaaaaatggtagaaattaga-tttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtag 516  Q
    ||||| |||||||||||||||||  ||||| |||   || |||||| ||| ||||||  ||||||| ||||  ||||||||| ||  || |||||| ||     
T  4253689 attggtaaaatggtagaaattagggtttgttctttgtgagcttgttgaagctaatttcatgtaacccttttatatctctttggaaagaactcattgataa 4253590  T
Q  517 tggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactagataaa 576  Q
    |||||| ||||||||||||||||||||||||||||||| | ||| |||||||||| ||||    
T  4253589 tggattagagagatcaatctctcccacagagtaggtcaat-ttggaccgaactaggtaaa 4253531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 507 - 569
Target Start/End: Complemental strand, 8359387 - 8359325
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaact 569  Q
    |||||| |||||||||||||||||||||||||||  |||||||||||||||||| ||||||||    
T  8359387 tcattgatagtggattggagagatcaatctctcctccagagtaggtcattgttggaccgaact 8359325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 421 - 554
Target Start/End: Original strand, 35853926 - 35854058
Alignment:
Q  421 ggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtgga 520  Q
    ||||||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| ||||||||| || || | ||||| |||||||    
T  35853926 ggaaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgtaagaact-cattgatagtgga 35854024  T
Q  521 ttggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||| |||||||||||  ||||||||||||    
T  35854025 ttggagagttcaatctctcctccagagtaggtca 35854058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 423 - 554
Target Start/End: Original strand, 23555054 - 23555184
Alignment:
Q  423 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 522  Q
    ||||||||||||||||||  |||| |||   || |||||| ||| |||||| |||||||  ||||| | ||||||| || || | ||||| |||||||||    
T  23555054 aaaaatggtagaaattagggttgttctttgtgaacttgttgaagctaatttcttgtaacacttttgtacctctttgtaagaact-cattgatagtggatt 23555152  T
Q  523 ggagagatcaatctctcccacagagtaggtca 554  Q
    ||||||||||||||||||  ||||||||||||    
T  23555153 ggagagatcaatctctcctccagagtaggtca 23555184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 457 - 554
Target Start/End: Original strand, 3259043 - 3259139
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||| ||||||||||||||   |||| ||||||||| || |||  ||||| |||||||||||||||||||||||||||  ||||||||||||    
T  3259043 cttgtttaagctaatttattgtaactcatttgtatctctttgtaa-aaacccattgatagtggattggagagatcaatctctcctccagagtaggtca 3259139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 421 - 554
Target Start/End: Complemental strand, 14069989 - 14069857
Alignment:
Q  421 ggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtgga 520  Q
    ||||||| ||||||||||||  |||| |||   || ||||| |||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||    
T  14069989 ggaaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtgga 14069891  T
Q  521 ttggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||  ||| |||||||    
T  14069890 ttggagagatcaatctctccccaagattaggtca 14069857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 421 - 554
Target Start/End: Complemental strand, 14380017 - 14379885
Alignment:
Q  421 ggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtgga 520  Q
    ||||||| ||||||||||||  |||| |||   || ||||| |||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||    
T  14380017 ggaaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtgga 14379919  T
Q  521 ttggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||  ||| |||||||    
T  14379918 ttggagagatcaatctctcccctagattaggtca 14379885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 457 - 554
Target Start/End: Original strand, 29991101 - 29991197
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||| |||| |||||| |||||||| ||||| ||||||||  || || | ||||| |||||||||||||||||||||||||||  ||||||||||||    
T  29991101 cttgtcaaagctaatttcttgtaacccttttgtatctctttctaataact-cattgatagtggattggagagatcaatctctcctccagagtaggtca 29991197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 457 - 554
Target Start/End: Complemental strand, 32358174 - 32358078
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||  ||||||||||||    
T  32358174 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcctccagagtaggtca 32358078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 415 - 554
Target Start/End: Original strand, 18126649 - 18126788
Alignment:
Q  415 gagattggaaaaatg-gtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    ||||||||||||||| |||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | |||||     
T  18126649 gagattggaaaaatgtgtagaaattagggttgttctttgtgaacttgttcaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattga 18126747  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||  ||||||||||||| |||| |||||||    
T  18126748 tagtggattggaggaatcaatctctcccccagactaggtca 18126788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 415 - 554
Target Start/End: Original strand, 22269978 - 22270117
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || |  ||||     
T  22269978 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaactg-attga 22270076  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||  ||||||||||||    
T  22270077 tagtggattggagagatcaatctctcctccagagtaggtca 22270117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 415 - 554
Target Start/End: Original strand, 27347822 - 27347961
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | |||||     
T  27347822 gagattgggaaaatgggtagaaattaggattgttctttgtgaacttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattga 27347920  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||| ||||||||||||||||| |||| |||||||    
T  27347921 tagtggattgcagagatcaatctctcccccagattaggtca 27347961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 415 - 554
Target Start/End: Original strand, 48489436 - 48489575
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||  |||| |||  | | |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||      
T  48489436 gagattgggaaaatgggtagaaattagggttgttctttgaaaacttgttgaagctaatttcttgtaacccatttgtatctctttgcaataact-cattca 48489534  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||| |||| |||||||    
T  48489535 tagtggattggagagatcaatctctcccccagattaggtca 48489575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 416 - 554
Target Start/End: Original strand, 6431977 - 6432115
Alignment:
Q  416 agattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggt 514  Q
    ||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | | ||| |    
T  6431977 agattgggaaaatgggtagaaattaggattgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cgttgat 6432075  T
Q  515 agtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||||||||||||||||||||||||  ||||||||||||    
T  6432076 agtggattggagagatcaatctctccttcagagtaggtca 6432115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 457 - 554
Target Start/End: Original strand, 19502226 - 19502322
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||| |||| |||||| |||||||  ||||| ||||||||| || || | ||||| |||||||||||||||||||||||||||  ||||||| ||||    
T  19502226 cttgtcaaagctaatttcttgtaactcttttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcctccagagtaagtca 19502322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 457 - 554
Target Start/End: Complemental strand, 30024852 - 30024756
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | | ||| |||||||||||||||||||||| ||||| ||||||||||||    
T  30024852 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-ctttgatagtggattggagagatcaatcactcccccagagtaggtca 30024756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 421 - 554
Target Start/End: Complemental strand, 41317590 - 41317458
Alignment:
Q  421 ggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtgga 520  Q
    |||||| |||||||||||||  |||| |||   || ||||| |||| |||||| |||||| |  |||| ||| ||||| || || | ||||| |||||||    
T  41317590 ggaaaattggtagaaattagggttgttctttgtgagcttgtcaaagctaatttcttgtaatccatttgtatccctttgtaagaact-cattgatagtgga 41317492  T
Q  521 ttggagagatcaatctctcccacagagtaggtca 554  Q
    ||||||||||||||||||||| |||| |||||||    
T  41317491 ttggagagatcaatctctcccccagattaggtca 41317458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 458 - 554
Target Start/End: Original strand, 8153391 - 8153486
Alignment:
Q  458 ttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||| |||| |||||| |||||||   |||| ||||||||| || || | ||||| |||||||||||||||||||||||||||| |||| |||||||    
T  8153391 ttgtcaaagctaatttcttgtaactcatttgtatctctttgtaataact-cattgatagtggattggagagatcaatctctcccccagattaggtca 8153486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 392 - 569
Target Start/End: Original strand, 26639303 - 26639484
Alignment:
Q  392 attgagtgtcttatttatggaaggagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcat 491  Q
    ||||||| |||| ||| ||| | |||||||  ||||||||||||||||| | ||| |||| |||  ||||| | |||||||| |||||||| ||||| ||    
T  26639303 attgagtctcttctttttgggaagagattgtgaaaatggtagaaattaggtatgttcttggagagtttgttgatgttaatttcttgtaacccttttgtat 26639402  T
Q  492 ctct----ttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaact 569  Q
     | |    ||| ||  || || ||| || |||||| |||||||||||||||||  || |||| |||||||||||||||||||    
T  26639403 atatatcattgtaaataactctttgataatggattagagagatcaatctctcctccatagtatgtcattgttgtaccgaact 26639484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 41649173 - 41649035
Alignment:
Q  415 gagattggaaaaat-ggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||||||||| |||||||||||| ||||| |||   || |||||| | | |||||| ||||||||  |||| ||| ||||| || || | |||||     
T  41649173 gagattggaaaaattggtagaaattaggtttgttctttgtgagcttgttta-gctaatttcttgtaacccatttgtatccctttgtaagaact-cattga 41649076  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||||| || | |||||||    
T  41649075 tagtggattggagagatcaatctctcccccaaattaggtca 41649035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 415 - 554
Target Start/End: Original strand, 43864249 - 43864388
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||||||| ||| ||||||||||  |||| |||   || |||||| ||| ||||||  |||||||  |||| ||||||||| || ||| | ||||     
T  43864249 gagattggaaaagtgggtagaaattagggttgttctttgtgaacttgttgaagctaatttcctgtaacccatttgtatctctttgtaa-aaactaattga 43864347  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||||||||||||||| | |||| |||||||    
T  43864348 tagtggattggagagatcaatctctctcccagattaggtca 43864388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 457 - 541
Target Start/End: Complemental strand, 47674063 - 47673980
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctccc 541  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| ||||||||||||||||||||||||||||    
T  47674063 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctccc 47673980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 415 - 541
Target Start/End: Original strand, 4586166 - 4586292
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||  ||||||||| || || | |||||     
T  4586166 gagattgggaaaatgggtagaaattagggttgttctttgtgaacttgttgaagctaattttttgtaacccatttttatctctttgtaagaact-cattga 4586264  T
Q  514 tagtggattggagagatcaatctctccc 541  Q
    ||||||||||||||||||||||||||||    
T  4586265 tagtggattggagagatcaatctctccc 4586292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 415 - 541
Target Start/End: Original strand, 26417321 - 26417447
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | | |||     
T  26417321 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagataatttcttgtaacccatttgtatctctttgtaagaact-cgttga 26417419  T
Q  514 tagtggattggagagatcaatctctccc 541  Q
    ||||||||||||||||||||||||||||    
T  26417420 tagtggattggagagatcaatctctccc 26417447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 507 - 554
Target Start/End: Complemental strand, 34310787 - 34310740
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| |||||||||||||||||||||||||||  ||||||||||||    
T  34310787 tcattgatagtggattggagagatcaatctctcctccagagtaggtca 34310740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 415 - 554
Target Start/End: Original strand, 39731374 - 39731513
Alignment:
Q  415 gagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggt 514  Q
    ||||||||||||| ||||||||||||  |||| |||   || ||||| | |  |||||| |||||||  ||||| ||||||||   |  || |||||| |    
T  39731374 gagattggaaaaagggtagaaattagggttgttctttgtgaacttgtcagatctaatttcttgtaactcttttgtatctcttttgtaagaactcattgat 39731473  T
Q  515 agtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||| |||||||||||  ||||||||||||    
T  39731474 agtggattggagagttcaatctctcctccagagtaggtca 39731513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 571
Target Start/End: Original strand, 2390330 - 2390442
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtcatt 556  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | |||   |||||||||||||||||||||||||||  ||||||||||||      
T  2390330 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaataact-catatatagtggattggagagatcaatctctcctccagagtaggtca-a 2390427  T
Q  557 gttgtaccgaactag 571  Q
    |||| ||||||||||    
T  2390428 gttggaccgaactag 2390442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 468 - 554
Target Start/End: Complemental strand, 23565170 - 23565085
Alignment:
Q  468 taatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| |||||||  ||||| ||||||||| || || | ||||| |||||||||||||||||||||||||| |  |||||||||||    
T  23565170 taatttcttgtaactcttttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctctcctagagtaggtca 23565085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 504 - 569
Target Start/End: Original strand, 18396412 - 18396477
Alignment:
Q  504 aattcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaact 569  Q
    ||||||||| ||| |||||||||||||||||||||||   ||||||||||| || || ||||||||    
T  18396412 aattcattgatagaggattggagagatcaatctctcctcaagagtaggtcaatggtggaccgaact 18396477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 25767124 - 25766984
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacct-ttttgcatctctttgaaacaaattcattg 512  Q
    ||||||||||||| || ||||||||||  |||| |||   || ||||| |||| |||||| ||||||||  ||||| ||||||||  || || | |||||    
T  25767124 gagattggaaaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaaccccttttgtatctcttttgaagaact-cattg 25767026  T
Q  513 gtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
     ||||||||||||||| |||||||||||  ||||||||||||    
T  25767025 atagtggattggagagttcaatctctcctccagagtaggtca 25766984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 554
Target Start/End: Complemental strand, 2361135 - 2360996
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| |||||||   |||| ||||||||| || || | |||||     
T  2361135 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaact-cattga 2361037  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||||||| |||| ||||||||||||| |||| |||||||    
T  2361036 tagtggatttgagatatcaatctctcccccagattaggtca 2360996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 554
Target Start/End: Original strand, 29608742 - 29608881
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| ||||||||||  |||| |||   || |||||| ||| |||||| |||||||   |||| ||||||||| || || | |||||     
T  29608742 gagattgggaaaatgggtagaaattagggttgttctttgtgagcttgttgaagctaatttcttgtaactcatttgtatctctttgtaagaact-cattga 29608840  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||||||||| ||||||| ||||  ||||||||||||    
T  29608841 tagtggattggagatatcaatcactcctccagagtaggtca 29608881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 502 - 554
Target Start/End: Original strand, 30814528 - 30814580
Alignment:
Q  502 caaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||| |||||| |||||||||||||||||||||||||||| || | |||||||    
T  30814528 caaactcattgatagtggattggagagatcaatctctcccccatattaggtca 30814580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 415 - 550
Target Start/End: Complemental strand, 31105556 - 31105421
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| ||||||| |||||||||||||| | |||   || |||||| ||| |||||| ||||||||  |||| |||| |||| || || | |||||     
T  31105556 gagattgggaaaatgggtagaaattagattttttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctttttgtaagaact-cattga 31105458  T
Q  514 tagtggattggagagatcaatctctcccacagagtag 550  Q
    | ||||||||||||||| ||||||||||  |||||||    
T  31105457 tggtggattggagagataaatctctccccaagagtag 31105421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 554
Target Start/End: Complemental strand, 496054 - 496007
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||||||||||||||||||||||||||||  | |||||||||    
T  496054 tcattgatagtggattggagagatcaatctctcccctatagtaggtca 496007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 554
Target Start/End: Complemental strand, 24525573 - 24525526
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||||||||||||||||||||||||||||  ||| |||||||    
T  24525573 tcattgatagtggattggagagatcaatctctccccaagattaggtca 24525526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 554
Target Start/End: Original strand, 25615950 - 25615997
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||||||||| |||||||||||||||||  ||||||||||||    
T  25615950 tcattgatagtggattagagagatcaatctctcctccagagtaggtca 25615997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 424 - 495
Target Start/End: Complemental strand, 43363627 - 43363556
Alignment:
Q  424 aaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctct 495  Q
    ||||||||||||||||| ||||| |||| ||| |||||| ||  ||||||||||||||  ||||| ||||||    
T  43363627 aaaatggtagaaattaggtttgttcttggagagcttgttgaaactaatttattgtaactcttttgtatctct 43363556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 421 - 554
Target Start/End: Original strand, 4178786 - 4178917
Alignment:
Q  421 ggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtgga 520  Q
    ||||||| ||||||||||||  |||| |||   || ||||  |||| |||||| |||||||| ||||| |||||||||||   || |||||| |||||||    
T  4178786 ggaaaaaaggtagaaattagggttgttctttgtgaacttgggaaagctaatttcttgtaacccttttgtatctctttgaa--gaactcattgatagtgga 4178883  T
Q  521 ttggagagatcaatctctcccacagagtaggtca 554  Q
    ||| | || |||||||||||  ||||| ||||||    
T  4178884 ttgaacagttcaatctctcctccagagcaggtca 4178917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 415 - 552
Target Start/End: Complemental strand, 4508869 - 4508732
Alignment:
Q  415 gagattggaaaaatg-gtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||| |||||| |||||||||||  |||| |||   || ||| || ||| |||||| ||||||||  |||| ||||||||| || || | |||||     
T  4508869 gagattgggaaaatgagtagaaattagggttgttctttgtgagcttattgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattga 4508771  T
Q  514 tagtggattggagagatcaatctctcccacagagtaggt 552  Q
     |||||||||||||||||||||||| |  ||||||||||    
T  4508770 gagtggattggagagatcaatctcttcttcagagtaggt 4508732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 513 - 571
Target Start/End: Complemental strand, 12097932 - 12097875
Alignment:
Q  513 gtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactag 571  Q
    |||||||||||||||||| |||||||||| |||| |||||||  |||| ||||||||||    
T  12097932 gtagtggattggagagatgaatctctcccccagattaggtca-agttggaccgaactag 12097875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 515 - 576
Target Start/End: Original strand, 31519007 - 31519068
Alignment:
Q  515 agtggattggagagatcaatctctc-ccacagagtaggtcattgttgtaccgaactagataaa 576  Q
    ||||||||||||||||||||||||| || ||||||||||||  |||| |||||||| ||||||    
T  31519007 agtggattggagagatcaatctctctccccagagtaggtca-agttggaccgaactggataaa 31519068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 468 - 554
Target Start/End: Complemental strand, 31733078 - 31732993
Alignment:
Q  468 taatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||||||||  |||| ||||||||| || || | ||||| || ||||||||||||||||||||||||| || | |||||||    
T  31733078 taatttcttgtaacccatttgtatctctttgtaagaact-cattgatactggattggagagatcaatctctcccccaaattaggtca 31732993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 382 - 535
Target Start/End: Complemental strand, 36574710 - 36574558
Alignment:
Q  382 agtgaaaagtattgagtgtcttatttatggaaggagattggaaaaatggtagaaatta-gatttgtgcttgaagatcttgttaaagttaatttattgtaa 480  Q
    |||||||| ||| ||||||||| ||||| | || |||||||  ||| ||||||||||| ||||||| |||   ||  ||||| ||| |||||| ||||||    
T  36574710 agtgaaaattatcgagtgtcttgtttattggag-agattggggaaa-ggtagaaattaagatttgttctttgtgagtttgttgaagctaatttcttgtaa 36574613  T
Q  481 cctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatc 535  Q
    || ||||  ||||||||| ||  || |||||| |||||| |||||||||||||||    
T  36574612 cccttttatatctctttgtaaagaactcattgatagtggtttggagagatcaatc 36574558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 554
Target Start/End: Original strand, 1113705 - 1113801
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||| |||||| || |||||  |||| ||||||||| || || | ||||| |||| ||||||||||||||||||||||| || | |||||||    
T  1113705 cttgttgaagctaatttcttataacccatttgtatctctttgtaagaact-cattgatagtagattggagagatcaatctctcccccatattaggtca 1113801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 392 - 498
Target Start/End: Complemental strand, 1360338 - 1360230
Alignment:
Q  392 attgagtgtcttatttatggaaggagattggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacc--tttttgc 489  Q
    ||||||| |||| || |||||| |||||||| |||| |||||||||||| |||   |||| ||| |||||| |||  ||||| ||||||||  ||||||     
T  1360338 attgagtctcttgttcatggaatgagattgggaaaaaggtagaaattaggttttgtcttggagaacttgttgaagcgaatttcttgtaacccttttttgt 1360239  T
Q  490 atctctttg 498  Q
    |||||||||    
T  1360238 atctctttg 1360230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 457 - 538
Target Start/End: Complemental strand, 6360072 - 6359992
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctct 538  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | ||||| |||| ||||||||||||||||||||    
T  6360072 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattgatagttgattggagagatcaatctct 6359992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 540
Target Start/End: Complemental strand, 48599405 - 48599372
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcc 540  Q
    |||||| |||||||||||||||||||||||||||    
T  48599405 tcattgatagtggattggagagatcaatctctcc 48599372  T

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Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 507 - 571
Target Start/End: Complemental strand, 36146479 - 36146416
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggtcattgttgtaccgaactag 571  Q
    |||||| ||||||||| |||||||||||||||||| || | |||||||  |||| ||||||||||    
T  36146479 tcattgatagtggatttgagagatcaatctctcccccatattaggtca-agttggaccgaactag 36146416  T

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Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 458 - 554
Target Start/End: Complemental strand, 47676255 - 47676160
Alignment:
Q  458 ttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||| ||| |||||| ||||||||  |||| ||||||||| || || | || || ||||||| |||||||||||||||||||| || | |||||||    
T  47676255 ttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-caatgatagtggaatggagagatcaatctctcccccatattaggtca 47676160  T

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Target: scaffold0002 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 421 - 554
Target Start/End: Original strand, 434545 - 434677
Alignment:
Q  421 ggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtgga 520  Q
    ||||||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| ||||||||| || || | ||||| |||||||    
T  434545 ggaaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgtaagaact-cattgatagtgga 434643  T
Q  521 ttggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||| |||||||||||  ||||||||||||    
T  434644 ttggagagttcaatctctcctccagagtaggtca 434677  T

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Target: scaffold1519 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 423 - 554
Target Start/End: Original strand, 930 - 1059
Alignment:
Q  423 aaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggatt 522  Q
    ||||| ||||||||||||  |||| |||   || ||||| |||| |||||| |||||||| ||||| |||||||||||   || |||||| |||||||||    
T  930 aaaaagggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaacccttttgtatctctttgaac--aactcattgatagtggatt 1027  T
Q  523 ggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| |||||||||||  ||||||||||||    
T  1028 ggagagttcaatctctcctccagagtaggtca 1059  T

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Target: scaffold0286 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 421 - 554
Target Start/End: Original strand, 11569 - 11701
Alignment:
Q  421 ggaaaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtgga 520  Q
    ||||||||||||||||||||  |||| |||   || ||||| |||| |||||| |||||||   |||| ||||||||| || || | ||||| |||||||    
T  11569 ggaaaaatggtagaaattagggttgttctttgtgaacttgtcaaagctaatttcttgtaactcatttgtatctctttgtaagaact-cattgatagtgga 11667  T
Q  521 ttggagagatcaatctctcccacagagtaggtca 554  Q
    |||||||| |||||||||||  ||||||||||||    
T  11668 ttggagagttcaatctctcctccagagtaggtca 11701  T

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Target: scaffold0016 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 457 - 552
Target Start/End: Original strand, 114650 - 114744
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggt 552  Q
    ||||| |||| |||||| |||||||  ||||| ||||||||| || || | ||||| |||||||||||||||||||||||||||  ||||||||||    
T  114650 cttgtcaaagctaatttcttgtaacgcttttgtatctctttgtaagaact-cattgatagtggattggagagatcaatctctcctccagagtaggt 114744  T

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Target: scaffold0236 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 468 - 554
Target Start/End: Original strand, 10548 - 10633
Alignment:
Q  468 taatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||||||||||||| ||||| ||||||||| || || | | ||| |||||||||| ||||||||||||||||  ||||||||||||    
T  10548 taatttattgtaaccattttgtatctctttgtaagaact-cgttgatagtggattgaagagatcaatctctcctccagagtaggtca 10633  T

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Target: scaffold0006 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 507 - 552
Target Start/End: Complemental strand, 149168 - 149123
Alignment:
Q  507 tcattggtagtggattggagagatcaatctctcccacagagtaggt 552  Q
    |||||| |||||||||||||||||||||||||||| ||||||||||    
T  149168 tcattgatagtggattggagagatcaatctctcccccagagtaggt 149123  T

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Target: scaffold0466 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 415 - 540
Target Start/End: Original strand, 7332 - 7457
Alignment:
Q  415 gagattggaaaaatgg-tagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattgg 513  Q
    |||||||||||||||| |||||||||   |||| |||   || |||||| ||| |||||| ||||||||  |||| ||||||||| || || | |||||     
T  7332 gagattggaaaaatgggtagaaattaaggttgttctttgtgagcttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-cattga 7430  T
Q  514 tagtggattggagagatcaatctctcc 540  Q
    |||||||||||| ||||||||||||||    
T  7431 tagtggattggaaagatcaatctctcc 7457  T

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Target: scaffold0176 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 554
Target Start/End: Complemental strand, 18123 - 18028
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||| |||||| |||||||   |||| ||||||||| ||  || |||||| |||||||||||||||||||||||||||  ||| ||||||||    
T  18123 cttgttgaagctaatttcttgtaactcatttgtatctctttgtaa--aactcattgatagtggattggagagatcaatctctcctccagggtaggtca 18028  T

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Target: scaffold0066 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 457 - 554
Target Start/End: Complemental strand, 20535 - 20439
Alignment:
Q  457 cttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| ||| |||||| ||||||||  |||| ||||||||| || || | | ||| || ||||||||||||||||||||||||| |||| |||||||    
T  20535 cttgttgaagctaatttcttgtaacccatttgtatctctttgtaagaact-ctttgatattggattggagagatcaatctctcccccagattaggtca 20439  T

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Target: scaffold0053 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 424 - 531
Target Start/End: Original strand, 25068 - 25175
Alignment:
Q  424 aaaatggtagaaattagatttgtgcttgaagatcttgttaaagttaatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattg 523  Q
    ||||||||||||| ||| ||||| |||  |||  ||||| ||| |||||| |||||||||||||| ||||||||| ||  || |||||| ||||| | |     
T  25068 aaaatggtagaaactagttttgttctttgagagtttgttgaaggtaatttcttgtaacctttttgtatctctttgtaaagaactcattgatagtgaagta 25167  T
Q  524 gagagatc 531  Q
    ||||||||    
T  25168 gagagatc 25175  T

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Target: scaffold0491 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 468 - 554
Target Start/End: Complemental strand, 8845 - 8759
Alignment:
Q  468 taatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| |||||||| ||||| ||||||||   |  || || ||| ||||||||||||||| |||||||||||  ||||||||||||    
T  8845 taatttcttgtaacccttttgtatctcttttgtaagaactcgttgatagtggattggagagttcaatctctcctccagagtaggtca 8759  T

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Target: scaffold0491; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 468 - 554
Target Start/End: Complemental strand, 11271 - 11185
Alignment:
Q  468 taatttattgtaacctttttgcatctctttgaaacaaattcattggtagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    |||||| |||||||| ||||| ||||||||   |  || || ||| ||||||||||||||| |||||||||||  ||||||||||||    
T  11271 taatttcttgtaacccttttgtatctcttttgtaagaactcgttgatagtggattggagagttcaatctctcctccagagtaggtca 11185  T

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Target: scaffold0674 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 514 - 554
Target Start/End: Complemental strand, 3790 - 3750
Alignment:
Q  514 tagtggattggagagatcaatctctcccacagagtaggtca 554  Q
    ||||||||||||||| |||||||||||  ||||||||||||    
T  3790 tagtggattggagagttcaatctctcctccagagtaggtca 3750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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