View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5192_high_4 (Length: 427)
Name: NF5192_high_4
Description: NF5192
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5192_high_4 |
 | |
|
| [»] scaffold0027 (1 HSPs) |
| | |
|
| [»] scaffold0360 (1 HSPs) |
| | |
|
Alignment Details
Target: chr2 (Bit Score: 195; Significance: 1e-106; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 15 - 225
Target Start/End: Complemental strand, 4199852 - 4199642
Alignment:
| Q |
15 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccaga |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
4199852 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcaatacaccacacaaaccagttatccaga |
4199753 |
T |
|
| Q |
115 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaat |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4199752 |
ccaatcacaatactcctcgttcaacctaccaacccctccacactttgtaaactatccccaaacaagctacgcacctcaatggccaaattcacaaactaat |
4199653 |
T |
|
| Q |
215 |
accatagaaag |
225 |
Q |
| |
|
||||||||||| |
|
|
| T |
4199652 |
accatagaaag |
4199642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 15 - 225
Target Start/End: Complemental strand, 31668446 - 31668236
Alignment:
| Q |
15 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccaga |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
31668446 |
attctcaacaaagtcatcatggagaaagctcccgaacatcaaactatccatttgatgacttcaatccaactcagtacaccacacaaaccagttacccaga |
31668347 |
T |
|
| Q |
115 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaat |
214 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
31668346 |
ccaatcacaatgctcctcgttcaacctaccaacccctccacacattgtaaactatccccaaacaagttacgcacctcaatggccaaattcacaaactaat |
31668247 |
T |
|
| Q |
215 |
accatagaaag |
225 |
Q |
| |
|
||||||||||| |
|
|
| T |
31668246 |
accatagaaag |
31668236 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 15 - 225
Target Start/End: Original strand, 7087589 - 7087799
Alignment:
| Q |
15 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccaga |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |
|
|
| T |
7087589 |
attctcaacaaagtcatcatggagaaagctcccgaatatcaaactattcatttgatgacttcaatccaactcactacaccacacaaaccagttatccata |
7087688 |
T |
|
| Q |
115 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaat |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
7087689 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcctcaaacaagctacacacctcaatggccaaattcacaaactaat |
7087788 |
T |
|
| Q |
215 |
accatagaaag |
225 |
Q |
| |
|
||||||||||| |
|
|
| T |
7087789 |
accatagaaag |
7087799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 15 - 225
Target Start/End: Complemental strand, 8289480 - 8289270
Alignment:
| Q |
15 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccaga |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
8289480 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaacttttcatttgatgacttcaatccaactcagtacaccacacaaaccagttacccaga |
8289381 |
T |
|
| Q |
115 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaat |
214 |
Q |
| |
|
| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
8289380 |
caaatcacaatactcctctttcaacctaccatcccctccacacattgtaaactatccccaaacaagctacgcacctcattggccaaattcacaaactaat |
8289281 |
T |
|
| Q |
215 |
accatagaaag |
225 |
Q |
| |
|
||||||||||| |
|
|
| T |
8289280 |
accatagaaag |
8289270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 191; Significance: 1e-103; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 15 - 225
Target Start/End: Complemental strand, 42606375 - 42606165
Alignment:
| Q |
15 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccaga |
114 |
Q |
| |
|
||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
42606375 |
attctcaacaaagtcatcacggagaaagctcccgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttacccaga |
42606276 |
T |
|
| Q |
115 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaat |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42606275 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatccccaaacaagctacgcacctcaatggccaaattcacaaactaat |
42606176 |
T |
|
| Q |
215 |
accatagaaag |
225 |
Q |
| |
|
||||||||||| |
|
|
| T |
42606175 |
accatagaaag |
42606165 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 15 - 225
Target Start/End: Original strand, 35306455 - 35306665
Alignment:
| Q |
15 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccaga |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |
|
|
| T |
35306455 |
attctcaacaaagtcatcatggagaaagctcccgaacatcaaactattcatttgatgacttcaatccaactcagtacaccatacaaaccagttacccaga |
35306554 |
T |
|
| Q |
115 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaat |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
35306555 |
ccaatcacaatactcctcgttcaacctaccaacccctccacactttgtaaactatccccaaacaagctacgcacctcaatgtccaaattcacaaactaat |
35306654 |
T |
|
| Q |
215 |
accatagaaag |
225 |
Q |
| |
|
||||||||||| |
|
|
| T |
35306655 |
accatagaaag |
35306665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 15 - 225
Target Start/End: Original strand, 44803952 - 44804162
Alignment:
| Q |
15 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccaga |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |
|
|
| T |
44803952 |
attctcaacaaagtcatcatggagaaagctcccgaacatcaaactattcatttgatgacttcaatccaactcactacaccacacaaaccagttttccaga |
44804051 |
T |
|
| Q |
115 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaat |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
44804052 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcctcaaacaagctacgcacctcaatgaccaaattcacaaactaat |
44804151 |
T |
|
| Q |
215 |
accatagaaag |
225 |
Q |
| |
|
||||||||||| |
|
|
| T |
44804152 |
accatagaaag |
44804162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 15 - 225
Target Start/End: Original strand, 43632400 - 43632610
Alignment:
| Q |
15 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccaga |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| | ||| |
|
|
| T |
43632400 |
attctcaacaaagtcatcatggagaaagctcctgaacatcaaactattcatttgatgacttcaatccaactcagtataccacacaaaccagttacctaga |
43632499 |
T |
|
| Q |
115 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaat |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
43632500 |
ccaatcacaatactcctcgttcaacctaccaacctctccacacattgtaaactatccccaaacaagctacgcacctcaatgaccaaattcacaaactaat |
43632599 |
T |
|
| Q |
215 |
accatagaaag |
225 |
Q |
| |
|
||||||||||| |
|
|
| T |
43632600 |
accatagaaag |
43632610 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 15 - 220
Target Start/End: Original strand, 21063461 - 21063666
Alignment:
| Q |
15 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccaga |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||| |
|
|
| T |
21063461 |
attctcaacaaagtcatcatggagaaagctcctgaacatcaaactattcatttgatgactttaatccaactcagtacaccacacaaactagttacccaga |
21063560 |
T |
|
| Q |
115 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaat |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| | |||| ||||||||||||||| |||||||||| ||||||| |
|
|
| T |
21063561 |
ccaatcacaatactcctcgttcaacctacccacccctccacacatcgtaaactatcctcaaacaaactacgcacctcaatgaccaaattcacgaactaat |
21063660 |
T |
|
| Q |
215 |
accata |
220 |
Q |
| |
|
|||||| |
|
|
| T |
21063661 |
accata |
21063666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 191; Significance: 1e-103; HSPs: 7)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 15 - 225
Target Start/End: Original strand, 51798879 - 51799089
Alignment:
| Q |
15 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccaga |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
51798879 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttattcaga |
51798978 |
T |
|
| Q |
115 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaat |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || | ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51798979 |
ccaatcacaatactcctcgttcaacctaccaactcctccacacattgtaaactattcccaaacaagctacgcacctcaatggccaaattcacaaactaat |
51799078 |
T |
|
| Q |
215 |
accatagaaag |
225 |
Q |
| |
|
||||||||||| |
|
|
| T |
51799079 |
accatagaaag |
51799089 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 15 - 225
Target Start/End: Original strand, 39506309 - 39506519
Alignment:
| Q |
15 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccaga |
114 |
Q |
| |
|
|||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39506309 |
attctcaacaaaatcatcatggagaaagctccccaacatcaaactattcatttgatgactttaatccaactcagtacaccacacaaaccagttatccaga |
39506408 |
T |
|
| Q |
115 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaat |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
39506409 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatccccaaacaagctacgcacctcaatggccaaattcacaaactaat |
39506508 |
T |
|
| Q |
215 |
accatagaaag |
225 |
Q |
| |
|
||||||||||| |
|
|
| T |
39506509 |
accatagaaag |
39506519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 15 - 225
Target Start/End: Complemental strand, 21179881 - 21179671
Alignment:
| Q |
15 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccaga |
114 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
21179881 |
attctcaacaaagtattcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcaacacaccacacaaaccagttatccaga |
21179782 |
T |
|
| Q |
115 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaat |
214 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21179781 |
ctaatcacaatactcctcgttcaacctaccaacccctccacactttgtaaactatccccaaacaagctacgcacctcaatggccaaattcacaaactaat |
21179682 |
T |
|
| Q |
215 |
accatagaaag |
225 |
Q |
| |
|
||||||||||| |
|
|
| T |
21179681 |
accatagaaag |
21179671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 23 - 225
Target Start/End: Complemental strand, 49004146 - 49003944
Alignment:
| Q |
23 |
caaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccagaccaatcac |
122 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |
|
|
| T |
49004146 |
caaagtcatcatggagaaagctctccaacatcaaactattcatttgatgacttcaatccaactcaatacaccacacaaaccagttattcagaccaatcac |
49004047 |
T |
|
| Q |
123 |
aatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaataccataga |
222 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
49004046 |
aatactcctcgttcaacctaccaacccctccacactttgtaaactatccccaaacaagctacgcacctcaatggccaaattcacaaactaataccataga |
49003947 |
T |
|
| Q |
223 |
aag |
225 |
Q |
| |
|
||| |
|
|
| T |
49003946 |
aag |
49003944 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 15 - 224
Target Start/End: Complemental strand, 30892313 - 30892104
Alignment:
| Q |
15 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccaga |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
30892313 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgactacaatccaactcaatacaccacacaaaccggttatccaga |
30892214 |
T |
|
| Q |
115 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaat |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| | |||||||| |||||||||||||||||||||||||| ||| |
|
|
| T |
30892213 |
ccaatcacaatactcctcgttcaacctaccaacccctccacactttgtcaactatccccaaacaagctatgcacctcaatggccaaattcacaaacaaat |
30892114 |
T |
|
| Q |
215 |
accatagaaa |
224 |
Q |
| |
|
|||||||||| |
|
|
| T |
30892113 |
accatagaaa |
30892104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 15 - 224
Target Start/End: Complemental strand, 53137169 - 53136960
Alignment:
| Q |
15 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccaga |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
53137169 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgactacaatccaactcaatacaccacacaaaccggttatccaga |
53137070 |
T |
|
| Q |
115 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaat |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| | |||||||| |||||||||||||||||||||||||| ||| |
|
|
| T |
53137069 |
ccaatcacaatactcctcgttcaacctaccaacccctccacactttgtcaactatccccaaacaagctatgcacctcaatggccaaattcacaaacaaat |
53136970 |
T |
|
| Q |
215 |
accatagaaa |
224 |
Q |
| |
|
||||||||| |
|
|
| T |
53136969 |
cccatagaaa |
53136960 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 15 - 224
Target Start/End: Original strand, 47096300 - 47096509
Alignment:
| Q |
15 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccaga |
114 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
47096300 |
attctcaacaaagtcatcatggagaaagttctcgaacatcaaactattcatttgatgactacaatccaactcaatacaccacacaaaccggttatccaga |
47096399 |
T |
|
| Q |
115 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaat |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| | |||||||| |||||||||||||||||||||||||| ||| |
|
|
| T |
47096400 |
ccaatcacaatactcctcgttcaacctaccaacccctccacactttgtcaactatccccaaacaagctatgcacctcaatggccaaattcacaaacaaat |
47096499 |
T |
|
| Q |
215 |
accatagaaa |
224 |
Q |
| |
|
||||||||| |
|
|
| T |
47096500 |
cccatagaaa |
47096509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 187; Significance: 1e-101; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 15 - 225
Target Start/End: Complemental strand, 49912414 - 49912204
Alignment:
| Q |
15 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccaga |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
49912414 |
attctcaacaaagtcatcatggagaaagctcccaaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttacccaga |
49912315 |
T |
|
| Q |
115 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaat |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
49912314 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatccccaaacaagctacgcacctcaatggctaaattcacaaactaat |
49912215 |
T |
|
| Q |
215 |
accatagaaag |
225 |
Q |
| |
|
||||||||||| |
|
|
| T |
49912214 |
accatagaaag |
49912204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 15 - 224
Target Start/End: Complemental strand, 48345028 - 48344819
Alignment:
| Q |
15 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccaga |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
48345028 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgactacaatccaactcaatacaccacacaaaccggttatccaga |
48344929 |
T |
|
| Q |
115 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaat |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| | |||||||| |||||||||||||||||||||||||| ||| |
|
|
| T |
48344928 |
ccaatcacaatactcctcgttcaacctaccaacccctccacactttgtcaactatccccaaacaagctatgcacctcaatggccaaattcacaaacaaat |
48344829 |
T |
|
| Q |
215 |
accatagaaa |
224 |
Q |
| |
|
||||||||| |
|
|
| T |
48344828 |
cccatagaaa |
48344819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 17 - 150
Target Start/End: Complemental strand, 45729292 - 45729159
Alignment:
| Q |
17 |
tctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccagacc |
116 |
Q |
| |
|
|||||||| |||||||||||||||||||| | || ||||||||||||||||||||||| |||| |||||| ||||| ||||||| |||| ||||||| |
|
|
| T |
45729292 |
tctcaacatagtcatcatggagaaagctcccaaatttcaaactattcatttgatgactttaatcaaactcaaaacaccccacaaactagtttcccagacc |
45729193 |
T |
|
| Q |
117 |
aatcacaatactcctcgttcaacctaccaacccc |
150 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||| |
|
|
| T |
45729192 |
aatcacgatactcctctttcaacctaccaacccc |
45729159 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 183; Significance: 7e-99; HSPs: 5)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 15 - 225
Target Start/End: Complemental strand, 26404529 - 26404320
Alignment:
| Q |
15 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccaga |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
26404529 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcaatacaccacacaaaccagttatccaga |
26404430 |
T |
|
| Q |
115 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaat |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| | |||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26404429 |
ccaatcacaatactcctcgttcaacctaccaacccc-ctacactttgtaaactatccccaaacaagctacgcacctcaatggccaaattcacaaactaat |
26404331 |
T |
|
| Q |
215 |
accatagaaag |
225 |
Q |
| |
|
||||||||||| |
|
|
| T |
26404330 |
accatagaaag |
26404320 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 15 - 225
Target Start/End: Complemental strand, 27252133 - 27251923
Alignment:
| Q |
15 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccaga |
114 |
Q |
| |
|
||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |
|
|
| T |
27252133 |
attcttaacaaagtcatcatggagaaagctcccgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttacccata |
27252034 |
T |
|
| Q |
115 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaat |
214 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27252033 |
tcaatcacaatactcctcattcaacctaccaacccctccacacattgtaaactatccccaaacaagctacgcacctcaatggccaaattcacaaactaat |
27251934 |
T |
|
| Q |
215 |
accatagaaag |
225 |
Q |
| |
|
||||||||||| |
|
|
| T |
27251933 |
accatagaaag |
27251923 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 15 - 225
Target Start/End: Complemental strand, 28347267 - 28347057
Alignment:
| Q |
15 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccaga |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
28347267 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgactacaatccaactcaacacaccacacaaaccagttatccaga |
28347168 |
T |
|
| Q |
115 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaat |
214 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| | |||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
28347167 |
ccaatcacaatactcctcgtacaacctaccaacccctccacactttgtaaactatccccaaacaacctacgcacctcaatggccaaattcacaaactaat |
28347068 |
T |
|
| Q |
215 |
accatagaaag |
225 |
Q |
| |
|
|||||||||| |
|
|
| T |
28347067 |
cccatagaaag |
28347057 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 17 - 224
Target Start/End: Complemental strand, 40755530 - 40755323
Alignment:
| Q |
17 |
tctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccagacc |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
40755530 |
tctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgactacaatccaactcaatacaccacacaaaccagttatccagacc |
40755431 |
T |
|
| Q |
117 |
aatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaatac |
216 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||| |||| ||||||||| | |||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
40755430 |
aatcacaatactcctcgttcaacctaccagcccctccacactttgtcaactatccccaaacaagctatgcacctcaatggccaaattcacaaacaaatac |
40755331 |
T |
|
| Q |
217 |
catagaaa |
224 |
Q |
| |
|
||| |||| |
|
|
| T |
40755330 |
catggaaa |
40755323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 196 - 225
Target Start/End: Original strand, 43655009 - 43655038
Alignment:
| Q |
196 |
gccaaattcacaaactaataccatagaaag |
225 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
|
|
| T |
43655009 |
gccaaattcacaaactaataccatagaaag |
43655038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 179; Significance: 2e-96; HSPs: 11)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 15 - 225
Target Start/End: Original strand, 2496472 - 2496682
Alignment:
| Q |
15 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccaga |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
2496472 |
attctcaacaaagtcatcatggagaaagctcttgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttacccaga |
2496571 |
T |
|
| Q |
115 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaat |
214 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
2496572 |
tcaatcacaatactcctcattcaacctaccaacccctccacacattgtaaactatccccaaacaaactatgcacctcaatggccaaattcacaaactaat |
2496671 |
T |
|
| Q |
215 |
accatagaaag |
225 |
Q |
| |
|
||||||||||| |
|
|
| T |
2496672 |
accatagaaag |
2496682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 15 - 224
Target Start/End: Complemental strand, 27820431 - 27820222
Alignment:
| Q |
15 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccaga |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
27820431 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgactacaatccaactcaatacaccacacaaaccagttatccaga |
27820332 |
T |
|
| Q |
115 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaat |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| | |||||||| |||||||||||||||||||||||||| ||| |
|
|
| T |
27820331 |
ccaatcacaatactcctcgttcaacctaccaacccctccacactttgtcaactatccccaaacaagctatgcacctcaatggccaaattcacaaacaaat |
27820232 |
T |
|
| Q |
215 |
accatagaaa |
224 |
Q |
| |
|
|||||||||| |
|
|
| T |
27820231 |
accatagaaa |
27820222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 17 - 224
Target Start/End: Complemental strand, 5626156 - 5625949
Alignment:
| Q |
17 |
tctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccagacc |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
5626156 |
tctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgactacaatccaactcaatacaccacacaaaccagttatccagacc |
5626057 |
T |
|
| Q |
117 |
aatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaatac |
216 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| | |||||||| |||||||||||||||||||||||||| ||||| |
|
|
| T |
5626056 |
aatcacaatactcctcgttcaacctaccaacccctccacactttgtcaactatccccaaacaagctatgcacctcaatggccaaattcacaaacaaatac |
5625957 |
T |
|
| Q |
217 |
catagaaa |
224 |
Q |
| |
|
|||||||| |
|
|
| T |
5625956 |
catagaaa |
5625949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 34 - 225
Target Start/End: Original strand, 33405552 - 33405743
Alignment:
| Q |
34 |
tggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccagaccaatcacaatactcctcg |
133 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
33405552 |
tggagaaagctcccgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttacccagaccaatcacaatactcctcg |
33405651 |
T |
|
| Q |
134 |
ttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaataccatagaaag |
225 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33405652 |
ttcaacctaccaacccctccacacattgtaaactatccccaaacaagctacgcacctcaatggccaaattcacaaactaataccatagaaag |
33405743 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 15 - 225
Target Start/End: Original strand, 25084041 - 25084251
Alignment:
| Q |
15 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccaga |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
25084041 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgactacaatccaactcaacacaccacacaaaccagttattcaga |
25084140 |
T |
|
| Q |
115 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaat |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
25084141 |
ccaatcacaatactcctcgttcaacctaccaacccctccacactttgtaaactatccccaaacaacctatgcacctcaatggccaaattcacaaactaat |
25084240 |
T |
|
| Q |
215 |
accatagaaag |
225 |
Q |
| |
|
|||||||||| |
|
|
| T |
25084241 |
cccatagaaag |
25084251 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 15 - 225
Target Start/End: Original strand, 25142011 - 25142221
Alignment:
| Q |
15 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccaga |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| |||| |
|
|
| T |
25142011 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgactacaatccaactcaacacaccacacaaaccagttattcaga |
25142110 |
T |
|
| Q |
115 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaat |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||| ||| |||||||||||||||||||||||||||||| |
|
|
| T |
25142111 |
ccaatcacaatactcctcgttcaacctaccaacccctccacactttgtaaactatccccaaacaacctatgcacctcaatggccaaattcacaaactaat |
25142210 |
T |
|
| Q |
215 |
accatagaaag |
225 |
Q |
| |
|
|||||||||| |
|
|
| T |
25142211 |
cccatagaaag |
25142221 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 15 - 225
Target Start/End: Original strand, 28472327 - 28472537
Alignment:
| Q |
15 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccaga |
114 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| ||||| |
|
|
| T |
28472327 |
attctcaacaaagtcatcatggagaaagctcccgaacatcaaactattcatttgatgacatcaatccaactcagtacacctcacaaaccagttacccaga |
28472426 |
T |
|
| Q |
115 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaat |
214 |
Q |
| |
|
| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||| |||| ||||||||||||||||||||||||||||| |
|
|
| T |
28472427 |
ctagtcacaatactcctcgttcaacctaccaacccctccatacattgtaaactatcccaaaacaaactacacacctcaatggccaaattcacaaactaat |
28472526 |
T |
|
| Q |
215 |
accatagaaag |
225 |
Q |
| |
|
||||||||||| |
|
|
| T |
28472527 |
accatagaaag |
28472537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 15 - 224
Target Start/End: Complemental strand, 5896738 - 5896529
Alignment:
| Q |
15 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccaga |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||| ||||||||||| |
|
|
| T |
5896738 |
attctcaacaaagtcatcatggagaaagctctcgaatatcaaactattcatttgatgatttcaatccaactcaacacaccacacaaactagttatccaga |
5896639 |
T |
|
| Q |
115 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaat |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||| | |||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
5896638 |
ccaatcacaatactcctcgttcaacctaccaacccctccacactttgtaaactacccccaaacaagctacgcacctcaatgaccaaattcacaaactaat |
5896539 |
T |
|
| Q |
215 |
accatagaaa |
224 |
Q |
| |
|
|||||||||| |
|
|
| T |
5896538 |
accatagaaa |
5896529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 15 - 224
Target Start/End: Original strand, 20880788 - 20880997
Alignment:
| Q |
15 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccaga |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||| |||| |||||||||| |
|
|
| T |
20880788 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgactacaatccaactcaatacaccacaccaaccggttatccaga |
20880887 |
T |
|
| Q |
115 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaat |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| | |||||||| |||||||||||||||||||||||||| ||| |
|
|
| T |
20880888 |
ccaatcacaatactcctcgttcaacctaccaacccctccacactttgtcaactatccccaaacaagctatgcacctcaatggccaaattcacaaacaaat |
20880987 |
T |
|
| Q |
215 |
accatagaaa |
224 |
Q |
| |
|
||||||||| |
|
|
| T |
20880988 |
cccatagaaa |
20880997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 15 - 224
Target Start/End: Original strand, 42830400 - 42830609
Alignment:
| Q |
15 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccaga |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
42830400 |
attctcaacaaagtcatcatggagaaagctcttgaacatcaaactattcatttgatgactacaatccaactcaatacaccacacaaaccagttatccaga |
42830499 |
T |
|
| Q |
115 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaat |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||| | ||||||| |||||||||||||||||||||||||| ||| |
|
|
| T |
42830500 |
ccaatcacaatactcctcgttcaacctaccaacccctccaccctttgtcaactatccccaagcaagctatgcacctcaatggccaaattcacaaacaaat |
42830599 |
T |
|
| Q |
215 |
accatagaaa |
224 |
Q |
| |
|
|||||||||| |
|
|
| T |
42830600 |
accatagaaa |
42830609 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 15 - 225
Target Start/End: Original strand, 25061628 - 25061838
Alignment:
| Q |
15 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccaga |
114 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| | |
|
|
| T |
25061628 |
attctcaacaaagtcatcatggagaaaactctcgaacatcaaactattcatttgatgactacaatccaactcaacacaccacacaaaccagttatccaaa |
25061727 |
T |
|
| Q |
115 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaat |
214 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| | |||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
25061728 |
ccaatcacaatactcctcgttcgacctaccaacccctccacactttgtaaactatccacaaacaacctacgcacctcaatggccaaattcacaaactaat |
25061827 |
T |
|
| Q |
215 |
accatagaaag |
225 |
Q |
| |
|
|||||||||| |
|
|
| T |
25061828 |
cccatagaaag |
25061838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 174; Significance: 2e-93; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 174; E-Value: 2e-93
Query Start/End: Original strand, 15 - 224
Target Start/End: Original strand, 7829396 - 7829605
Alignment:
| Q |
15 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccaga |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
7829396 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgactacaatccaactcaatacaccacacaaaccggttatccaga |
7829495 |
T |
|
| Q |
115 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaat |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| | |||||||| |||||||||||||||||||||||||| ||| |
|
|
| T |
7829496 |
ccaatcacaatactcctcgttcaacctaccaacccctccacactttgtcaactatccccaaacaagctatgcacctcaatggccaaattcacaaacaaat |
7829595 |
T |
|
| Q |
215 |
accatagaaa |
224 |
Q |
| |
|
|||||||||| |
|
|
| T |
7829596 |
accatagaaa |
7829605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 101 - 225
Target Start/End: Complemental strand, 40844843 - 40844720
Alignment:
| Q |
101 |
accagttatccagaccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaa |
200 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||| ||| | |||||||||||||||||||| |||| |
|
|
| T |
40844843 |
accagttacccagaccaatcacaatactcctcgttcaacctac-aacctctccacacattgtaaactaaccccaaacaagctacgcacctcaatgaccaa |
40844745 |
T |
|
| Q |
201 |
attcacaaactaataccatagaaag |
225 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
40844744 |
attcacaaactaataccatagaaag |
40844720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 40844895 - 40844844
Alignment:
| Q |
15 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatt |
66 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||| ||||||||||| |
|
|
| T |
40844895 |
attctcaacaaagtcatcatggagaaagctcccgaacatcgaactattcatt |
40844844 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 171; Significance: 1e-91; HSPs: 6)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 171; E-Value: 1e-91
Query Start/End: Original strand, 15 - 225
Target Start/End: Original strand, 31156987 - 31157197
Alignment:
| Q |
15 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccaga |
114 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
31156987 |
attcttaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgactacaatccaactcaatacaccacacaaaccagttattcaga |
31157086 |
T |
|
| Q |
115 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaat |
214 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||| |||| ||||||||| | ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31157087 |
ccaatcacaatactcctcgttcaacctaccaacccctctacattttgttaactatccccaaacaagctacgcacctcaatggccaaattcacaaactaat |
31157186 |
T |
|
| Q |
215 |
accatagaaag |
225 |
Q |
| |
|
||||||||||| |
|
|
| T |
31157187 |
accatagaaag |
31157197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 17 - 225
Target Start/End: Complemental strand, 32631682 - 32631474
Alignment:
| Q |
17 |
tctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccagacc |
116 |
Q |
| |
|
||||||| ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||| || |||| |
|
|
| T |
32631682 |
tctcaacttagtcatcattgagaaagctctcaaacatcaaactattcatttgatgacttcaatccaactcaaaacaccccacaaactagttaccctgacc |
32631583 |
T |
|
| Q |
117 |
aatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaatac |
216 |
Q |
| |
|
|||||||||||||||||||| | |||||||||||||| ||||||||||||||||| | |||| ||| |||| ||||||||| || ||||| ||||||| |
|
|
| T |
32631582 |
gatcacaatactcctcgttcatcttaccaacccctccaaacattgtaaactatccccaaacaaactattcaccccaatggccacatccacaacctaatac |
32631483 |
T |
|
| Q |
217 |
catagaaag |
225 |
Q |
| |
|
|||| |||| |
|
|
| T |
32631482 |
cataaaaag |
32631474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 7685191 - 7685104
Alignment:
| Q |
15 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaac |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7685191 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaac |
7685104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 17 - 199
Target Start/End: Original strand, 12994573 - 12994755
Alignment:
| Q |
17 |
tctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccagacc |
116 |
Q |
| |
|
|||||||| | |||||||||||||||||| | || |||||||||||||||||||||||| ||||||| || ||||| ||||||||||| ||||||| |
|
|
| T |
12994573 |
tctcaacatattcatcatggagaaagctcccaaatatcaaactattcatttgatgacttttatccaacccaaaacaccccacaaaccagtatcccagacc |
12994672 |
T |
|
| Q |
117 |
aatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggcca |
199 |
Q |
| |
|
||| ||||||||| || |||||| ||||||||||||| ||| |||| |||||||| | |||| || || ||| ||||||||| |
|
|
| T |
12994673 |
aatgacaatactcttctttcaacttaccaacccctccgaacaatgtacactatccccaaacaaacttcgtaccccaatggcca |
12994755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 17 - 154
Target Start/End: Original strand, 32634908 - 32635045
Alignment:
| Q |
17 |
tctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccagacc |
116 |
Q |
| |
|
|||| ||| ||||||||| ||||||||||| ||||||||||||||||||||| |||||||| ||| |||| |||| ||||||| ||||| ||||||| |
|
|
| T |
32634908 |
tctctacatagtcatcataaagaaagctctcaaacatcaaactattcatttgacaacttcaattcaaatcagatcaccccacaaactagttacccagacc |
32635007 |
T |
|
| Q |
117 |
aatcacaatactcctcgttcaacctaccaacccctcca |
154 |
Q |
| |
|
||| ||||||||||| |||||||||| ||||||||||| |
|
|
| T |
32635008 |
aattacaatactccttgttcaacctatcaacccctcca |
32635045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 21 - 138
Target Start/End: Original strand, 13023697 - 13023814
Alignment:
| Q |
21 |
aacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccagaccaatc |
120 |
Q |
| |
|
|||| |||||||||||||||||||| | || |||||||||||||||||||||||| ||||||| | ||||| |||||| |||| ||| ||||| | |
|
|
| T |
13023697 |
aacatagtcatcatggagaaagctcccaaatatcaaactattcatttgatgacttttatccaacctaaaacaccccacaaatcagtatcccaaaccaacc |
13023796 |
T |
|
| Q |
121 |
acaatactcctcgttcaa |
138 |
Q |
| |
|
||||||||| || ||||| |
|
|
| T |
13023797 |
acaatactcttctttcaa |
13023814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0027 (Bit Score: 170; Significance: 4e-91; HSPs: 1)
Name: scaffold0027
Description:
Target: scaffold0027; HSP #1
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 15 - 224
Target Start/End: Complemental strand, 56081 - 55872
Alignment:
| Q |
15 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgacttcaatccaactcagtacaccacacaaaccagttatccaga |
114 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||||| |
|
|
| T |
56081 |
attctcaacaaagtcatcatggagaaagctctcgaacatcaaactattcatttgatgactacaatccaactcaatacaccacacaaaccggttatccaga |
55982 |
T |
|
| Q |
115 |
ccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattcacaaactaat |
214 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| | |||||||| |||||||||||||||||||||||||| ||| |
|
|
| T |
55981 |
ccaatcacaatactcctcgttcaacctaccaacccctccacactttgtcaactatccccaaacaagctatgcacctcaatggccaaattcacaaacaaat |
55882 |
T |
|
| Q |
215 |
accatagaaa |
224 |
Q |
| |
|
||||||||| |
|
|
| T |
55881 |
cccatagaaa |
55872 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0360 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: scaffold0360
Description:
Target: scaffold0360; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 105 - 224
Target Start/End: Original strand, 10137 - 10256
Alignment:
| Q |
105 |
gttatccagaccaatcacaatactcctcgttcaacctaccaacccctccacacattgtaaactatcccaatacaagctacgcacctcaatggccaaattc |
204 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| | |||||||| |||| ||||||||||||||| |
|
|
| T |
10137 |
gttatccagaccaatcacaatactcctcgttcaacctaccaacccctccacactttgtcaactatccccaaacaagctatgcacttcaatggccaaattc |
10236 |
T |
|
| Q |
205 |
acaaactaataccatagaaa |
224 |
Q |
| |
|
|||||| ||||||||||||| |
|
|
| T |
10237 |
acaaacaaataccatagaaa |
10256 |
T |
|
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