View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5193_high_26 (Length: 246)
Name: NF5193_high_26
Description: NF5193
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5193_high_26 |
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Alignment Details
Target: chr3 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 11 - 227
Target Start/End: Original strand, 22644604 - 22644820
Alignment:
| Q |
11 |
gagtgagatgaacaaaggattgtgagtgaatcggagcatgtgattaaatcagtcctatccatgtattatgacgtatggaaaaataggaacaagagtgctt |
110 |
Q |
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| T |
22644604 |
gagtgggatgaacaagggattgtgagtgaatcggagcatgtgattaaatcagtcctatccatgtattatgacgtatggaaaaataggaacaagagtgctt |
22644703 |
T |
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| Q |
111 |
tgacggatatgatattcccggtgcagcagacgggggttagggactgtcggcagtaactcgtgatgctgacagagtagttgaacttgttgctctgaactgc |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
22644704 |
tgacggatatgatattcccggtgcagcagacgggggttagggactgtcagcagtaactcgtgatgctgacagagtagttgaacttgttgctctgaactgc |
22644803 |
T |
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| Q |
211 |
tgtaaaaacatgatgtg |
227 |
Q |
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||||||||||||||||| |
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| T |
22644804 |
tgtaaaaacatgatgtg |
22644820 |
T |
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