View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5195-Insertion-5 (Length: 574)
Name: NF5195-Insertion-5
Description: NF5195
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5195-Insertion-5 |
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Alignment Details
Target: chr5 (Bit Score: 521; Significance: 0; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 521; E-Value: 0
Query Start/End: Original strand, 7 - 571
Target Start/End: Original strand, 2949449 - 2950014
Alignment:
| Q |
7 |
ataaaacactca-tatgttttgttaactgcatacatatatcatatgacatgatgtgttcaattgctagccttgcatgatatgtctcttaattacttggga |
105 |
Q |
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| T |
2949449 |
ataaaacactcaatatgttttgttaactgcatacatatatcatatgacatgatgtgttcaattgctagccttgcatgatatgtctcttaattacttggga |
2949548 |
T |
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| Q |
106 |
tgcttcctcttctgcacgtcttctttcttcaaggagacattattannnnnnncattatccttattatggtaaagagtccctataatacaaaagtaagcag |
205 |
Q |
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| T |
2949549 |
tgcttcctcttctgcacgtcttctttcttcaaggagacattattatttttttcattatccttattatggtaaagagtccctataatacaaaagtaagcag |
2949648 |
T |
|
| Q |
206 |
gtgtatatgccagttttttaggagatttttcctagatttgatgagtgagttatgtatttgtctgaccaaaataggcatctcaagtaaatctactcatgga |
305 |
Q |
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| T |
2949649 |
gtgtatatgccagtttttaaggagatttttcctagatttgatgagtgagttatgtatttgtctgaccaaaataggcatctcaagtaaatctactcatgga |
2949748 |
T |
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| Q |
306 |
tatcattgaatgcttcaactcctaaacttgtttgtaatgctttgttcaacttgaaatctttccaatatctatactaaattttcaacaggaggcacataca |
405 |
Q |
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| T |
2949749 |
tatcattgaatgcttcaactcctaaacttgtttgtaatgctttgttcgacttgaaatctttccaatatctatactaaattttcaacaggaggcacataca |
2949848 |
T |
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| Q |
406 |
tacttttcctaatccttcatttttatgtagagaaaaatcttttgatagatcctttttctcagcaaccaaaatggatatataaattaatctcatcctaact |
505 |
Q |
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|||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2949849 |
tacttttcctaatccttcatttttatgtagaggaaaatcttttgatagatcttttttctcagcaaccaaaatggatatataaattaatctcatcctaact |
2949948 |
T |
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| Q |
506 |
aaaaaacttcatgtcttaattctcaagatatatcatacgtcattggtgattcattttgttcatctt |
571 |
Q |
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| T |
2949949 |
aaaaaacttcatgtcttaattctcaagatatatcatacgtcattggtgattcattttgttcatctt |
2950014 |
T |
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