View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5195_low_5 (Length: 365)
Name: NF5195_low_5
Description: NF5195
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5195_low_5 |
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Alignment Details
Target: chr4 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 60 - 309
Target Start/End: Original strand, 22326200 - 22326449
Alignment:
| Q |
60 |
catatcaattttgaatgtattggatatgtgtttgggttcattctgatccaagttgttgacattcaatttccattgagcaacgtaacccacagatttgaca |
159 |
Q |
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| T |
22326200 |
catatcaattttgaatgtatcggatatgtgtttgggttcattctgatccaagttgttgacattcaatttccattgagcaaggtaacccactgatttgaca |
22326299 |
T |
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| Q |
160 |
agataggccattgtttttctttccagttctttctctaaagaaatacaaaaaacagtgtttagttttacaaaaacatagaataaaaacactaaagaatgtt |
259 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
22326300 |
agataggccattgtttttctttccagttctttctctaaagaaatacaaaaaacagtgtttagttttacaaaaacattgaataaaaacactaaagaatgtt |
22326399 |
T |
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| Q |
260 |
atataaatagatcatatagtcgcagattcgcatagtattcagcaacagat |
309 |
Q |
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| T |
22326400 |
atataaatagatcatatagtcgcagattcgcatagaattcagcaacagat |
22326449 |
T |
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