View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5200-Insertion-4 (Length: 512)
Name: NF5200-Insertion-4
Description: NF5200
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5200-Insertion-4 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 416; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 416; E-Value: 0
Query Start/End: Original strand, 32 - 512
Target Start/End: Complemental strand, 36339436 - 36338952
Alignment:
| Q |
32 |
attgatacaacgagttttgaagaagcaaattaaatgtacaaatacaaactacagttcctttgaaaactatacacctcctacagaaggggaccactaaaca |
131 |
Q |
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| T |
36339436 |
attgatgcaacgagttttgaagaagcaaattaaatgtacaaatacaaactacagttcctttgaaaactatacccctcctacagaaggggaccactaaaca |
36339337 |
T |
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| Q |
132 |
attacaacatgattctatatcacgatttccactgatgctacatgttgcagttcttcaatgcaagacctaatctcataaatgcatcaaacctaaaggttgt |
231 |
Q |
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| T |
36339336 |
attacaacatgattctatatcacgatttccactgatgctacatgttgcagttcttcaatgcaaaacctaatctcataaatgcatcaaacctaaaggttgt |
36339237 |
T |
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| Q |
232 |
cataatctcatcgccacctttgtcataaagctattgtatgatttcaaatttttaacagattcaag----tatagtggtctttctcaccagttagctcaaa |
327 |
Q |
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|||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||| |
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| T |
36339236 |
cataatctcaccaccatctttgtcataaagctattgtatgatttcaaatttttaacagattcaagtatatatagtggcctttctcaccagttagctcaaa |
36339137 |
T |
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| Q |
328 |
tggtaactgaattgaattcaaagaatgaaagttgactgcaagaaacttgttcttgtttaagcactctctatcggagttaagacacgtgaactattcgata |
427 |
Q |
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||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
36339136 |
cggtaactgaattgaattcaaagagtgaaagtagactgcaagaaacttgttcttgtttaagcactctctatcggaactaagacacgtgaactattcgata |
36339037 |
T |
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| Q |
428 |
ttaacaaatagacttgataactcttcgagcatttcatgctgctcctaaatcattgaagcatacaattttgagcctatacacaaat |
512 |
Q |
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| T |
36339036 |
ttaacaaatagacttgataactcttcgagcatttcatgttgctcctaaatcattgaagcatacaattttgagcctatacacaaat |
36338952 |
T |
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