View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5201_high_14 (Length: 300)
Name: NF5201_high_14
Description: NF5201
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5201_high_14 |
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Alignment Details
Target: chr8 (Bit Score: 272; Significance: 1e-152; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 272; E-Value: 1e-152
Query Start/End: Original strand, 7 - 286
Target Start/End: Original strand, 39980735 - 39981014
Alignment:
| Q |
7 |
ggagcagagacagtaagtaactactacagaaaggagcaaatgagtctgacaaaagagatcagaaagtgttgaatcagtgcttcagaaaaacaaaacagca |
106 |
Q |
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|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39980735 |
ggagcaaagacagtaagtaactactacagaaaggagcaaatgagtctgacaaaagagatcagaaagtgttgaatcagtgcttcagaaaaacaaaacagca |
39980834 |
T |
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| Q |
107 |
acatgggaggatcttctgcagatcttcatcatcatgaatcagatatagaactcattgctcctgagaacagcacaaagttaagcactactgagtccaaatc |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39980835 |
acatgggaggatcttctgcagatcttcatcatcatgaatcagatatagaactcattgctcctgagaacagcacaaagttaagcactactgagtccaaatc |
39980934 |
T |
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| Q |
207 |
tgtcacagatattgaccataacatagaagaagatgcagactatgttgaggtgaccatggacattcaaggtgactctgttg |
286 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39980935 |
tgtcacagatgttgaccataacatagaagaagatgcagactatgttgaggtgaccatggacattcaaggtgactctgttg |
39981014 |
T |
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