View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5201_low_16 (Length: 297)

Name: NF5201_low_16
Description: NF5201
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5201_low_16
NF5201_low_16
[»] chr7 (26 HSPs)
chr7 (18-166)||(27289337-27289484)
chr7 (29-166)||(16111073-16111209)
chr7 (226-296)||(27289535-27289605)
chr7 (30-156)||(24831761-24831886)
chr7 (29-140)||(16404684-16404795)
chr7 (29-140)||(14143445-14143556)
chr7 (30-139)||(15881036-15881145)
chr7 (30-139)||(20986838-20986947)
chr7 (86-126)||(5389007-5389047)
chr7 (86-126)||(6537693-6537733)
chr7 (86-126)||(9542332-9542372)
chr7 (86-126)||(16139276-16139316)
chr7 (86-126)||(26306765-26306805)
chr7 (86-126)||(26360013-26360053)
chr7 (86-126)||(32101589-32101629)
chr7 (86-126)||(44900508-44900548)
chr7 (86-126)||(46500323-46500363)
chr7 (29-140)||(13663977-13664088)
chr7 (86-120)||(8504258-8504292)
chr7 (30-139)||(1995137-1995246)
chr7 (30-139)||(6870443-6870552)
chr7 (30-135)||(8005279-8005384)
chr7 (30-139)||(9167163-9167272)
chr7 (30-139)||(9440844-9440953)
chr7 (30-135)||(11012772-11012877)
chr7 (30-135)||(24741686-24741791)
[»] chr8 (12 HSPs)
chr8 (29-166)||(18163044-18163180)
chr8 (86-126)||(14888781-14888821)
chr8 (86-126)||(21210062-21210102)
chr8 (86-126)||(22833947-22833987)
chr8 (30-135)||(15783875-15783980)
chr8 (99-140)||(16744271-16744312)
chr8 (30-139)||(19232378-19232487)
chr8 (30-135)||(29083995-29084100)
chr8 (30-135)||(32080860-32080965)
chr8 (30-139)||(36085521-36085630)
chr8 (99-139)||(19425925-19425965)
chr8 (99-139)||(30317958-30317998)
[»] chr3 (29 HSPs)
chr3 (37-152)||(19638524-19638638)
chr3 (29-154)||(18698141-18698263)
chr3 (28-130)||(5798505-5798606)
chr3 (30-140)||(17899236-17899346)
chr3 (30-139)||(10630077-10630186)
chr3 (86-126)||(6425517-6425557)
chr3 (86-126)||(8976055-8976095)
chr3 (86-126)||(16404818-16404858)
chr3 (251-295)||(19638736-19638780)
chr3 (30-116)||(1728985-1729072)
chr3 (30-140)||(6493475-6493585)
chr3 (237-295)||(18698345-18698403)
chr3 (30-140)||(29464335-29464445)
chr3 (30-135)||(5540150-5540255)
chr3 (30-135)||(11275514-11275619)
chr3 (30-139)||(12240688-12240797)
chr3 (30-139)||(19786021-19786130)
chr3 (30-135)||(28317367-28317472)
chr3 (30-139)||(37874060-37874169)
chr3 (30-139)||(37882578-37882687)
chr3 (30-135)||(38202255-38202360)
chr3 (30-135)||(39379687-39379792)
chr3 (99-139)||(6213259-6213299)
chr3 (99-139)||(7797819-7797859)
chr3 (86-126)||(9540344-9540384)
chr3 (30-134)||(9985017-9985121)
chr3 (99-139)||(13146719-13146759)
chr3 (99-139)||(15840815-15840855)
chr3 (99-139)||(17014783-17014823)
[»] scaffold0758 (1 HSPs)
scaffold0758 (29-166)||(1973-2109)
[»] chr4 (20 HSPs)
chr4 (29-156)||(17528471-17528597)
chr4 (29-156)||(39042494-39042620)
chr4 (30-120)||(11451387-11451477)
chr4 (29-156)||(15406072-15406198)
chr4 (30-139)||(3379115-3379224)
chr4 (30-139)||(14839190-14839299)
chr4 (30-139)||(18755623-18755732)
chr4 (30-139)||(40457493-40457602)
chr4 (86-126)||(6695427-6695467)
chr4 (86-126)||(7843550-7843590)
chr4 (76-120)||(11543258-11543302)
chr4 (86-126)||(16268310-16268350)
chr4 (46-156)||(24901794-24901903)
chr4 (30-139)||(4990928-4991037)
chr4 (30-139)||(5019749-5019858)
chr4 (30-139)||(19947528-19947637)
chr4 (30-135)||(24647948-24648053)
chr4 (30-139)||(27173683-27173792)
chr4 (30-135)||(27664190-27664295)
chr4 (30-139)||(27818079-27818188)
[»] scaffold0037 (1 HSPs)
scaffold0037 (29-156)||(74899-75025)
[»] chr2 (17 HSPs)
chr2 (29-140)||(22674303-22674414)
chr2 (29-156)||(24841857-24841983)
chr2 (86-126)||(9510856-9510896)
chr2 (86-126)||(18654427-18654467)
chr2 (30-98)||(26443834-26443902)
chr2 (86-126)||(45017559-45017599)
chr2 (226-295)||(21151793-21151862)
chr2 (30-139)||(21165096-21165205)
chr2 (30-135)||(27228997-27229102)
chr2 (30-139)||(28724467-28724576)
chr2 (30-135)||(34793366-34793471)
chr2 (30-135)||(35260563-35260668)
chr2 (30-135)||(35271188-35271293)
chr2 (30-135)||(39173243-39173348)
chr2 (99-139)||(24804868-24804908)
chr2 (90-126)||(27167072-27167108)
chr2 (99-139)||(29251775-29251815)
[»] chr6 (20 HSPs)
chr6 (30-139)||(17780585-17780694)
chr6 (29-140)||(19071633-19071744)
chr6 (29-166)||(19446858-19446994)
chr6 (30-139)||(27501257-27501366)
chr6 (86-126)||(16901155-16901195)
chr6 (86-126)||(18163274-18163314)
chr6 (86-126)||(24929257-24929297)
chr6 (86-126)||(29562629-29562669)
chr6 (86-126)||(31360028-31360068)
chr6 (30-140)||(22383569-22383679)
chr6 (30-139)||(9115632-9115741)
chr6 (30-139)||(14056524-14056633)
chr6 (30-139)||(14062653-14062762)
chr6 (30-139)||(17611723-17611832)
chr6 (30-139)||(18827497-18827606)
chr6 (30-139)||(20033062-20033171)
chr6 (30-139)||(28254707-28254816)
chr6 (30-139)||(28333456-28333565)
chr6 (30-135)||(34810301-34810406)
chr6 (99-139)||(26041148-26041188)
[»] scaffold1684 (1 HSPs)
scaffold1684 (29-156)||(648-774)
[»] scaffold0047 (2 HSPs)
scaffold0047 (29-140)||(5897-6008)
scaffold0047 (30-139)||(36024-36133)
[»] scaffold0682 (1 HSPs)
scaffold0682 (58-139)||(5230-5311)
[»] scaffold0161 (2 HSPs)
scaffold0161 (29-166)||(13262-13398)
scaffold0161 (29-166)||(17935-18071)
[»] chr5 (26 HSPs)
chr5 (30-139)||(20555067-20555176)
chr5 (30-135)||(23299529-23299634)
chr5 (30-139)||(34775161-34775270)
chr5 (86-126)||(18382949-18382989)
chr5 (86-126)||(26199417-26199457)
chr5 (86-126)||(27415357-27415397)
chr5 (86-126)||(33942529-33942569)
chr5 (30-139)||(1118802-1118911)
chr5 (30-139)||(5298042-5298151)
chr5 (30-135)||(6979058-6979163)
chr5 (30-135)||(9339206-9339311)
chr5 (30-139)||(23399164-23399273)
chr5 (30-135)||(23700032-23700137)
chr5 (30-139)||(24944078-24944187)
chr5 (30-139)||(27619672-27619781)
chr5 (30-135)||(30234930-30235035)
chr5 (30-139)||(31443143-31443252)
chr5 (30-135)||(36590021-36590126)
chr5 (30-139)||(37737467-37737576)
chr5 (30-135)||(39498391-39498496)
chr5 (30-135)||(42046032-42046137)
chr5 (90-126)||(20951074-20951110)
chr5 (29-165)||(21202219-21202354)
chr5 (99-135)||(23485687-23485723)
chr5 (99-139)||(39355817-39355857)
chr5 (99-139)||(40393683-40393723)
[»] chr1 (12 HSPs)
chr1 (226-295)||(21127719-21127788)
chr1 (30-139)||(22652248-22652357)
chr1 (30-139)||(35641212-35641321)
chr1 (30-139)||(3179142-3179251)
chr1 (30-139)||(4174842-4174951)
chr1 (30-139)||(5642879-5642988)
chr1 (30-135)||(7514819-7514924)
chr1 (30-139)||(7692646-7692755)
chr1 (30-139)||(19184746-19184855)
chr1 (30-135)||(36239605-36239710)
chr1 (30-135)||(38102630-38102735)
chr1 (86-126)||(16158092-16158132)
[»] scaffold0611 (1 HSPs)
scaffold0611 (86-126)||(1253-1293)
[»] scaffold0254 (1 HSPs)
scaffold0254 (86-126)||(4659-4699)
[»] scaffold0142 (1 HSPs)
scaffold0142 (86-126)||(33993-34033)
[»] scaffold0058 (1 HSPs)
scaffold0058 (86-126)||(51675-51715)
[»] scaffold0014 (1 HSPs)
scaffold0014 (86-126)||(149884-149924)
[»] scaffold0389 (1 HSPs)
scaffold0389 (105-164)||(11609-11667)
[»] scaffold0211 (1 HSPs)
scaffold0211 (60-139)||(2880-2959)
[»] scaffold0183 (1 HSPs)
scaffold0183 (29-140)||(7904-8015)
[»] scaffold0141 (1 HSPs)
scaffold0141 (88-126)||(29155-29193)
[»] scaffold0049 (1 HSPs)
scaffold0049 (88-126)||(85619-85657)
[»] scaffold0382 (2 HSPs)
scaffold0382 (30-139)||(4454-4563)
scaffold0382 (99-139)||(12906-12946)
[»] scaffold0313 (1 HSPs)
scaffold0313 (90-126)||(12770-12806)
[»] scaffold0022 (1 HSPs)
scaffold0022 (99-139)||(46184-46224)
[»] scaffold0012 (2 HSPs)
scaffold0012 (99-139)||(4747-4787)
scaffold0012 (99-139)||(135303-135343)
[»] scaffold0003 (1 HSPs)
scaffold0003 (90-126)||(148225-148261)


Alignment Details
Target: chr7 (Bit Score: 141; Significance: 6e-74; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 27289337 - 27289484
Alignment:
Q  18 cagacaggaaaaactattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtg 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27289337 cagacaggaaaaactattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtg 27289436  T
Q  118 ataatggatatgatgtaatgttttgataagaacaactgcttagtaatca 166  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27289437 ataatggatatgatgtaatg-tttgataagaacaactgcttagtaatca 27289484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 16111073 - 16111209
Alignment:
Q  29 aactattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatat 128  Q
    ||||||||| |||||||||||||||||| ||||| | ||||||||||||||||| |||||||| ||||||||||| |||||||||||||||| ||| |||    
T  16111073 aactattggcaactcttctatctctattaataatgtgtggtttgttgatggacttagacataacctacttagcattagtcaattttgtgatagtggttat 16111172  T
Q  129 gatgtaatgttttgataagaacaactgcttagtaatca 166  Q
    ||||| ||| |||||||||| ||||| | |||||||||    
T  16111173 gatgtgatg-tttgataagagcaactacatagtaatca 16111209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 226 - 296
Target Start/End: Original strand, 27289535 - 27289605
Alignment:
Q  226 caatttctcagaactgactattcagaaggtagtttgtcttctgcgagtgagtgataagaaatggttgtggg 296  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27289535 caatttctcagaactgactaatcagaaggtagtttgtcttctgcgagtgagtgataagaaatggttgtggg 27289605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 30 - 156
Target Start/End: Complemental strand, 24831886 - 24831761
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    |||||||||||||| |||||||||||| ||||| ||| ||| || ||| |||| |  ||||| |||||||||||||||||||||||||||| ||| ||||    
T  24831886 actattggtaactcctctatctctattaataatgtttagttagtagatagactcaagcataacctacttagcataagtcaattttgtgatattggttatg 24831787  T
Q  130 atgtaatgttttgataagaacaactgc 156  Q
    | ||| || ||||||||||||||||||    
T  24831786 aagtagtg-tttgataagaacaactgc 24831761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 140
Target Start/End: Complemental strand, 16404795 - 16404684
Alignment:
Q  29 aactattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatat 128  Q
    ||||||||||||||||| |||||||||| ||||| | ||||| || ||| | || | ||||||  |||||||||| |||||||||||||||| ||| |||    
T  16404795 aactattggtaactcttttatctctattaataatgtgtggttggtagatagtctgaaacataacttacttagcatcagtcaattttgtgatagtggttat 16404696  T
Q  129 gatgtaatgttt 140  Q
    ||||| ||||||    
T  16404695 gatgtgatgttt 16404684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 29 - 140
Target Start/End: Complemental strand, 14143556 - 14143445
Alignment:
Q  29 aactattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatat 128  Q
    ||||||||||||||| |||||||| ||| ||||| | ||| | || ||||| ||   |||||| ||||| || || |||||||||||||||||||| |||    
T  14143556 aactattggtaactcctctatctcaattaataatgtgtggctggtagatggtctttaacataacctactaagtattagtcaattttgtgataatggttat 14143457  T
Q  129 gatgtaatgttt 140  Q
    ||||| ||||||    
T  14143456 gatgtgatgttt 14143445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 15881036 - 15881145
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || || || ||| ||||| | ||| |||| ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||||||||    
T  15881036 actattggtaattcctccatttcaattaataatgtgtggcttgtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatggatatg 15881135  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  15881136 atgtaatgtt 15881145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 20986947 - 20986838
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| |||| ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  20986947 actattggtaattcctccatctcaattaataatgtgtggcttgtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 20986848  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  20986847 atgtaatgtt 20986838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 5389047 - 5389007
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  5389047 acataatctacttagcataagtcaattgtgtgatagtggat 5389007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 6537693 - 6537733
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  6537693 acataatctacttagcataagtcaattgtgtgatagtggat 6537733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 9542372 - 9542332
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  9542372 acataatctacttagcataagtcaattgtgtgatagtggat 9542332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 16139316 - 16139276
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  16139316 acataatctacttagcataagtcaattatgtgatagtggat 16139276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 26306765 - 26306805
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  26306765 acataatctacttagcataagtcaattgtgtgatagtggat 26306805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 26360053 - 26360013
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  26360053 acataatctacttagcataagtcaattgtgtgatagtggat 26360013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 32101589 - 32101629
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  32101589 acataatctacttagcataagtcaattgtgtgatagtggat 32101629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 44900508 - 44900548
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  44900508 acataatctacttagcataagtcaattgtgtgatagtggat 44900548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 46500323 - 46500363
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  46500323 acataatctacttagcataagtcaattgtgtgatagtggat 46500363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 140
Target Start/End: Complemental strand, 13664088 - 13663977
Alignment:
Q  29 aactattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatat 128  Q
    ||||||||||||||| |||||||| ||| ||||| | ||||| || ||||| ||   |||||| ||  | || || ||||| |||||||||||||| |||    
T  13664088 aactattggtaactcctctatctcaattaataatgtgtggttggtagatggtcttgaacataaccttttaagtatcagtcagttttgtgataatggttat 13663989  T
Q  129 gatgtaatgttt 140  Q
    ||||| ||||||    
T  13663988 gatgtgatgttt 13663977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 86 - 120
Target Start/End: Original strand, 8504258 - 8504292
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgata 120  Q
    ||||||||||||||||||||||||||| |||||||    
T  8504258 acataatctacttagcataagtcaattgtgtgata 8504292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 1995246 - 1995137
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  1995246 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 1995147  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  1995146 atgtaatgtt 1995137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 6870443 - 6870552
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  6870443 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 6870542  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  6870543 atgtaatgtt 6870552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 135
Target Start/End: Original strand, 8005279 - 8005384
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | |||||||||||||||||||| ||||| ||||    
T  8005279 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcataagtcaattttgtgacaatgggtatg 8005378  T
Q  130 atgtaa 135  Q
    ||||||    
T  8005379 atgtaa 8005384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 9167272 - 9167163
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || || || ||| ||||| | ||| |||| ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  9167272 actattggtaattcctccatttcaattaataatgtgtggcttgtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 9167173  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  9167172 atgtaatgtt 9167163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 9440953 - 9440844
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  9440953 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 9440854  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  9440853 atgtaatgtt 9440844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 135
Target Start/End: Complemental strand, 11012877 - 11012772
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | |||||||||||||||||||| ||||| ||||    
T  11012877 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcataagtcaattttgtgacaatgggtatg 11012778  T
Q  130 atgtaa 135  Q
    ||||||    
T  11012777 atgtaa 11012772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 135
Target Start/End: Complemental strand, 24741791 - 24741686
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | |||||||||||||||||||| ||||| ||||    
T  24741791 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcataagtcaattttgtgacaatgggtatg 24741692  T
Q  130 atgtaa 135  Q
    ||||||    
T  24741691 atgtaa 24741686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 6e-34; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 18163180 - 18163044
Alignment:
Q  29 aactattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatat 128  Q
    |||||||||||||| || ||||| |||| ||||| ||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||| |||    
T  18163180 aactattggtaactattttatctttattaataatgtttggtttgttgatggattgagacataacctacttagcataagtcaattttgtgataatggttat 18163081  T
Q  129 gatgtaatgttttgataagaacaactgcttagtaatca 166  Q
    || || ||| ||| ||||||||||||||  ||||||||    
T  18163080 gaagtgatg-tttaataagaacaactgcacagtaatca 18163044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 14888821 - 14888781
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  14888821 acataatctacttagcataagtcaattgtgtgatagtggat 14888781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 21210102 - 21210062
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  21210102 acataatctacttagcataagtcaattgtgtgatagtggat 21210062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 22833947 - 22833987
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  22833947 acataatctacttagcataagtcaattgtgtgatagtggat 22833987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 135
Target Start/End: Original strand, 15783875 - 15783980
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | |||||||||||||||||||| ||||| ||||    
T  15783875 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcataagtcaattttgtgacaatgggtatg 15783974  T
Q  130 atgtaa 135  Q
    ||||||    
T  15783975 atgtaa 15783980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 140
Target Start/End: Complemental strand, 16744312 - 16744271
Alignment:
Q  99 agcataagtcaattttgtgataatggatatgatgtaatgttt 140  Q
    ||||| |||||||||||||| ||||| |||||||||||||||    
T  16744312 agcattagtcaattttgtgacaatgggtatgatgtaatgttt 16744271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 19232487 - 19232378
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || || || ||| ||||| | ||| |||| ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  19232487 actattggtaattcctccatttcaattaataatgtgtggcttgtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 19232388  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  19232387 atgtaatgtt 19232378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 135
Target Start/End: Complemental strand, 29084100 - 29083995
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | |||||||||||||||||||| ||||| ||||    
T  29084100 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcataagtcaattttgtgacaatgggtatg 29084001  T
Q  130 atgtaa 135  Q
    ||||||    
T  29084000 atgtaa 29083995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 135
Target Start/End: Original strand, 32080860 - 32080965
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | |||||||||||||||||||| ||||| ||||    
T  32080860 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcataagtcaattttgtgacaatgggtatg 32080959  T
Q  130 atgtaa 135  Q
    ||||||    
T  32080960 atgtaa 32080965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 36085630 - 36085521
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  36085630 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 36085531  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  36085530 atgtaatgtt 36085521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 19425965 - 19425925
Alignment:
Q  99 agcataagtcaattttgtgataatggatatgatgtaatgtt 139  Q
    ||||| |||||||||||||| ||||| ||||||||||||||    
T  19425965 agcattagtcaattttgtgacaatgggtatgatgtaatgtt 19425925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 30317958 - 30317998
Alignment:
Q  99 agcataagtcaattttgtgataatggatatgatgtaatgtt 139  Q
    ||||| |||||||||||||| ||||| ||||||||||||||    
T  30317958 agcattagtcaattttgtgacaatgggtatgatgtaatgtt 30317998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 72; Significance: 9e-33; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 37 - 152
Target Start/End: Original strand, 19638524 - 19638638
Alignment:
Q  37 gtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatgatgtaat 136  Q
    |||||||||||||||||||| ||||| | | |||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||| |||||||| ||    
T  19638524 gtaactcttctatctctattaataatgtgtagtttgttgatggactaagacataacctacttagcataagtaaattttgtgatagtggttatgatgtgat 19638623  T
Q  137 gttttgataagaacaa 152  Q
    | ||||||||||||||    
T  19638624 g-tttgataagaacaa 19638638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 154
Target Start/End: Original strand, 18698141 - 18698263
Alignment:
Q  29 aactattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatat 128  Q
    ||||||||||||||||| ||||||||   ||||| | ||||| || ||| || |||||||||| ||||||||||| ||||  |||||||||| ||| |||    
T  18698141 aactattggtaactcttttatctctaa--ataatgtgtggttggtagattgattaagacataacctacttagcattagtcggttttgtgatagtggttat 18698238  T
Q  129 gatgtaatgttttgataagaacaact 154  Q
    ||||| ||| |||||||||| |||||    
T  18698239 gatgtgatg-tttgataagaccaact 18698263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 28 - 130
Target Start/End: Original strand, 5798505 - 5798606
Alignment:
Q  28 aaactattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggata 127  Q
    ||||||||||||| || |||||||| ||  ||||| |||  ||||||  ||||||||  ||||| ||| ||||||| |||||||||||||||| ||||||    
T  5798505 aaactattggtaattcctctatctcaatcaataatttttt-tttgttattggactaaagcataacctatttagcattagtcaattttgtgatagtggata 5798603  T
Q  128 tga 130  Q
    |||    
T  5798604 tga 5798606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 140
Target Start/End: Original strand, 17899236 - 17899346
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || || || ||| ||||| | ||| |||| ||||| ||||  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  17899236 actattggtaattcctccatttcaattaataatgtgtggcttgtagatggtctaaagcataacctattgagcattagtcaattttgtgacaatgggtatg 17899335  T
Q  130 atgtaatgttt 140  Q
    |||||||||||    
T  17899336 atgtaatgttt 17899346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 10630077 - 10630186
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    |||||||||||||| || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  10630077 actattggtaactcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 10630176  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  10630177 atgtaatgtt 10630186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 6425517 - 6425557
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  6425517 acataatctacttagcataagtcaattgtgtgatagtggat 6425557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 8976055 - 8976095
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  8976055 acataatctacttagcataagtcaattatgtgatagtggat 8976095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 16404818 - 16404858
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  16404818 acataatctacttagcataagtcaattgtgtgatagtggat 16404858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 251 - 295
Target Start/End: Original strand, 19638736 - 19638780
Alignment:
Q  251 aaggtagtttgtcttctgcgagtgagtgataagaaatggttgtgg 295  Q
    |||||||||||||||||   |||||||||||||||||||||||||    
T  19638736 aaggtagtttgtcttctatcagtgagtgataagaaatggttgtgg 19638780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 116
Target Start/End: Original strand, 1728985 - 1729072
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagca-taagtcaattttgt 116  Q
    ||||||||||| ||||||||||||||  | ||| | ||||||| ||||||||| | |||||| ||||||| || ||||||||| ||||    
T  1728985 actattggtaattcttctatctctatcaaaaatgtctggtttgatgatggactgaaacataacctacttaacattaagtcaatgttgt 1729072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 140
Target Start/End: Original strand, 6493475 - 6493585
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  6493475 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 6493574  T
Q  130 atgtaatgttt 140  Q
    |||||||||||    
T  6493575 atgtaatgttt 6493585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 295
Target Start/End: Original strand, 18698345 - 18698403
Alignment:
Q  237 aactgactattcagaaggtagtttgtcttctgcgagtgagtgataagaaatggttgtgg 295  Q
    ||||||||  ||||||||||||||||||||||  | ||| |||||||||| ||||||||    
T  18698345 aactgactgatcagaaggtagtttgtcttctgtcaatgaatgataagaaacggttgtgg 18698403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 140
Target Start/End: Original strand, 29464335 - 29464445
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  29464335 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 29464434  T
Q  130 atgtaatgttt 140  Q
    |||||||||||    
T  29464435 atgtaatgttt 29464445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 135
Target Start/End: Original strand, 5540150 - 5540255
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | |||||||||||||||||||| ||||| ||||    
T  5540150 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcataagtcaattttgtgacaatgggtatg 5540249  T
Q  130 atgtaa 135  Q
    ||||||    
T  5540250 atgtaa 5540255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 135
Target Start/End: Original strand, 11275514 - 11275619
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | |||||||||||||||||||| ||||| ||||    
T  11275514 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcataagtcaattttgtgacaatgggtatg 11275613  T
Q  130 atgtaa 135  Q
    ||||||    
T  11275614 atgtaa 11275619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 12240688 - 12240797
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||  ||||| | ||| |||| ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  12240688 actattggtaattcctccatctcaataaataatgtgtggcttgtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 12240787  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  12240788 atgtaatgtt 12240797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 19786130 - 19786021
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  19786130 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 19786031  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  19786030 atgtaatgtt 19786021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 135
Target Start/End: Original strand, 28317367 - 28317472
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | |||||||||||||||||||| ||||| ||||    
T  28317367 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcataagtcaattttgtgacaatgggtatg 28317466  T
Q  130 atgtaa 135  Q
    ||||||    
T  28317467 atgtaa 28317472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 37874169 - 37874060
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  37874169 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 37874070  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  37874069 atgtaatgtt 37874060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 37882687 - 37882578
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  37882687 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 37882588  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  37882587 atgtaatgtt 37882578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 135
Target Start/End: Complemental strand, 38202360 - 38202255
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | |||||||||||||||||||| ||||| ||||    
T  38202360 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcataagtcaattttgtgacaatgggtatg 38202261  T
Q  130 atgtaa 135  Q
    ||||||    
T  38202260 atgtaa 38202255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 135
Target Start/End: Complemental strand, 39379792 - 39379687
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | |||||||||||||||||||| ||||| ||||    
T  39379792 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcataagtcaattttgtgacaatgggtatg 39379693  T
Q  130 atgtaa 135  Q
    ||||||    
T  39379692 atgtaa 39379687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 6213259 - 6213299
Alignment:
Q  99 agcataagtcaattttgtgataatggatatgatgtaatgtt 139  Q
    ||||| |||||||||||||| ||||| ||||||||||||||    
T  6213259 agcattagtcaattttgtgacaatgggtatgatgtaatgtt 6213299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 7797819 - 7797859
Alignment:
Q  99 agcataagtcaattttgtgataatggatatgatgtaatgtt 139  Q
    ||||| |||||||||||||| ||||| ||||||||||||||    
T  7797819 agcattagtcaattttgtgacaatgggtatgatgtaatgtt 7797859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 9540344 - 9540384
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    |||||||||||| |||||||||||||| ||||||| |||||    
T  9540344 acataatctactcagcataagtcaattgtgtgatagtggat 9540384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 134
Target Start/End: Original strand, 9985017 - 9985121
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| |||| ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  9985017 actattggtaattcctccatctcaattaataatgtgtggcttgtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 9985116  T
Q  130 atgta 134  Q
    |||||    
T  9985117 atgta 9985121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 13146759 - 13146719
Alignment:
Q  99 agcataagtcaattttgtgataatggatatgatgtaatgtt 139  Q
    ||||| |||||||||||||| ||||| ||||||||||||||    
T  13146759 agcatcagtcaattttgtgacaatgggtatgatgtaatgtt 13146719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 15840855 - 15840815
Alignment:
Q  99 agcataagtcaattttgtgataatggatatgatgtaatgtt 139  Q
    ||||| |||||||||||||| ||||| ||||||||||||||    
T  15840855 agcatcagtcaattttgtgacaatgggtatgatgtaatgtt 15840815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 17014823 - 17014783
Alignment:
Q  99 agcataagtcaattttgtgataatggatatgatgtaatgtt 139  Q
    ||||| |||||||||||||| ||||| ||||||||||||||    
T  17014823 agcatcagtcaattttgtgacaatgggtatgatgtaatgtt 17014783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0758 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0758
Description:

Target: scaffold0758; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 2109 - 1973
Alignment:
Q  29 aactattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatat 128  Q
    |||||||||||||||||||||||||||| ||||| | ||||||||||||||||| |||||||| ||||||| ||| ||||| |||||||||| ||| |||    
T  2109 aactattggtaactcttctatctctattaataatgtgtggtttgttgatggacttagacataacctacttaacattagtcagttttgtgatagtggttat 2010  T
Q  129 gatgtaatgttttgataagaacaactgcttagtaatca 166  Q
    ||||| | | |||| ||||| |||||||  ||||||||    
T  2009 gatgtgacg-tttggtaagagcaactgcacagtaatca 1973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 3e-23; HSPs: 20)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 29 - 156
Target Start/End: Original strand, 17528471 - 17528597
Alignment:
Q  29 aactattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatat 128  Q
    |||| |||||||||||| |||||||||| ||||| | |||||| |||||||||  ||| |||| ||||||||||| ||||||||||||| || ||| |||    
T  17528471 aactgttggtaactcttatatctctattaataatgtgtggtttattgatggacatagatataaactacttagcattagtcaattttgtggtagtggttat 17528570  T
Q  129 gatgtaatgttttgataagaacaactgc 156  Q
    ||||| ||||||| ||| ||||||||||    
T  17528571 gatgtgatgtttt-atacgaacaactgc 17528597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 39042620 - 39042494
Alignment:
Q  29 aactattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatat 128  Q
    ||||||| ||||||| |||||||||||| ||||| | ||||| || ||||| || |||||||| ||||||||||| ||||| |||||||||| ||| |||    
T  39042620 aactattagtaactcctctatctctattaataatgtgtggttggtagatggtcttagacataacctacttagcattagtcagttttgtgatagtggttat 39042521  T
Q  129 gatgtaatgttttgataagaacaactgc 156  Q
    ||||| ||| |||||||||| |||||||    
T  39042520 gatgtgatg-tttgataagaccaactgc 39042494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 30 - 120
Target Start/End: Original strand, 11451387 - 11451477
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgata 120  Q
    |||||||||||||||| |||||| ||  ||||| | || || ||| |||||||||||||||| |||||||  |||||||||||||||||||    
T  11451387 actattggtaactcttttatctcaatcaataatgtatgcttagtttatggactaagacataacctacttattataagtcaattttgtgata 11451477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 15406198 - 15406072
Alignment:
Q  29 aactattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatat 128  Q
    ||||||||||||||| ||||||| ||||  |||| | ||||| || ||||| || | |||||| ||  |||| || ||||| |||||||| ||||| |||    
T  15406198 aactattggtaactcctctatctgtattagtaatgtgtggttggtagatggtcttatacataaccttgttagtatcagtcagttttgtgacaatggttat 15406099  T
Q  129 gatgtaatgttttgataagaacaactgc 156  Q
    ||||| ||| |||||||||| |||||||    
T  15406098 gatgtgatg-tttgataagaccaactgc 15406072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 3379224 - 3379115
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| |||| ||||| ||||  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  3379224 actattggtaattcctccatctcaattaataatgtgtggcttgtagatggtctaaagcataacctattgagcattagtcaattttgtgacaatgggtatg 3379125  T
Q  130 atgtaatgtt 139  Q
    |||| |||||    
T  3379124 atgtcatgtt 3379115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 14839190 - 14839299
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || || || ||| ||||| | |||||||| ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  14839190 actattggtaattcctccatttcaattaataatgtgtggtttgtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 14839289  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  14839290 atgtaatgtt 14839299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 18755623 - 18755732
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    |||||||||||||| || ||||| ||| ||||| | ||| |||| ||||| || |  ||||| ||| | ||||| |||||||||||||| ||| | ||||    
T  18755623 actattggtaactcctccatctcaattaataatgtgtggcttgtagatggtctgaagcataacctattgagcattagtcaattttgtgacaattggtatg 18755722  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  18755723 atgtaatgtt 18755732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 40457493 - 40457602
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| |||| ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  40457493 actattggtaattcctccatctcaattaataatgtgtggcttgtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 40457592  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  40457593 atgtaatgtt 40457602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 6695427 - 6695467
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  6695427 acataatctacttagcataagtcaattgtgtgatagtggat 6695467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 7843590 - 7843550
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  7843590 acataatctacttagcataagtcaattgtgtgatagtggat 7843550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 76 - 120
Target Start/End: Complemental strand, 11543302 - 11543258
Alignment:
Q  76 atggactaagacataatctacttagcataagtcaattttgtgata 120  Q
    |||||||||||||||| |||||||  |||||||||||||||||||    
T  11543302 atggactaagacataacctacttattataagtcaattttgtgata 11543258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 16268310 - 16268350
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  16268310 acataatctacttagcataagtcaattgtgtgatagtggat 16268350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 46 - 156
Target Start/End: Original strand, 24901794 - 24901903
Alignment:
Q  46 ctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatgatgtaatgttttgata 145  Q
    ||||||||||  ||||| ||||||| ||||||||||||| ||| ||  |||||| |  || |||||||||||||| ||| |||||  | ||| ||| |||    
T  24901794 ctatctctatgaataatgtttggttagttgatggactaaaacaaaacttacttatctgaaatcaattttgtgatagtggttatgaaatgatg-tttaata 24901892  T
Q  146 agaacaactgc 156  Q
    |||||||||||    
T  24901893 agaacaactgc 24901903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 4990928 - 4991037
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||  ||||| | ||| |||| ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  4990928 actattggtaattcctccatctcaataaataatgtgtggcttgtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 4991027  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  4991028 atgtaatgtt 4991037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 5019858 - 5019749
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||  ||||| | ||| |||| ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  5019858 actattggtaattcctccatctcaataaataatgtgtggcttgtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 5019759  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  5019758 atgtaatgtt 5019749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 19947528 - 19947637
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  19947528 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 19947627  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  19947628 atgtaatgtt 19947637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 135
Target Start/End: Complemental strand, 24648053 - 24647948
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | |||||||||||||||||||| ||||| ||||    
T  24648053 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcataagtcaattttgtgacaatgggtatg 24647954  T
Q  130 atgtaa 135  Q
    ||||||    
T  24647953 atgtaa 24647948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 27173792 - 27173683
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  27173792 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 27173693  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  27173692 atgtaatgtt 27173683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 135
Target Start/End: Complemental strand, 27664295 - 27664190
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | |||||||||||||||||||| ||||| ||||    
T  27664295 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcataagtcaattttgtgacaatgggtatg 27664196  T
Q  130 atgtaa 135  Q
    ||||||    
T  27664195 atgtaa 27664190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 27818079 - 27818188
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || | |||||| ||| | ||||| |||||||||||||| || || ||||    
T  27818079 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaaacataacctattgagcattagtcaattttgtgacaacgggtatg 27818178  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  27818179 atgtaatgtt 27818188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 75025 - 74899
Alignment:
Q  29 aactattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatat 128  Q
    ||||| ||||||||| |||||||||||| ||||| | ||||| || ||||| |||| |||||| || ||||| || ||||| |||||||||||||| |||    
T  75025 aactactggtaactcctctatctctattaataatgtgtggttggtagatggtctaaaacataacctgcttagtatcagtcatttttgtgataatggttat 74926  T
Q  129 gatgtaatgttttgataagaacaactgc 156  Q
    ||||| ||| |||||||||| |||||||    
T  74925 gatgtgatg-tttgataagaccaactgc 74899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 8e-21; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 29 - 140
Target Start/End: Complemental strand, 22674414 - 22674303
Alignment:
Q  29 aactattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatat 128  Q
    |||||||| ||||||||||||||||||| ||||| | |||||||||||||||||  ||||||| || |||||||| ||| | |||||||||| | | |||    
T  22674414 aactattgataactcttctatctctattaataatgtgtggtttgttgatggactttgacataacctgcttagcattagtaagttttgtgatagtagttat 22674315  T
Q  129 gatgtaatgttt 140  Q
    ||||| ||||||    
T  22674314 gatgtgatgttt 22674303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 24841983 - 24841857
Alignment:
Q  29 aactattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatat 128  Q
    |||||||| |||||| | |||||||||| ||||| | ||||| || ||||| || |||||||| ||||| || || ||| | |||||||||||||| |||    
T  24841983 aactattgttaactcctttatctctattaataatgtgtggttggtagatggtcttagacataacctactcagtatcagttagttttgtgataatggttat 24841884  T
Q  129 gatgtaatgttttgataagaacaactgc 156  Q
    ||||| ||| |||||||||| |||||||    
T  24841883 gatgtgatg-tttgataagaccaactgc 24841857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 9510896 - 9510856
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  9510896 acataatctacttagcataagtcaattgtgtgatagtggat 9510856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 18654427 - 18654467
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  18654427 acataatctacttagcataagtcaattgtgtgatagtggat 18654467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 98
Target Start/End: Complemental strand, 26443902 - 26443834
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctactt 98  Q
    ||||||||||| ||||||||||| ||  ||||| | ||||||| ||||||||| |||||||| ||||||    
T  26443902 actattggtaattcttctatctcaatcaataatgtctggtttggtgatggacttagacataacctactt 26443834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 45017559 - 45017599
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  45017559 acataatctacttagcataagtcaattgtgtgatagtggat 45017599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 226 - 295
Target Start/End: Original strand, 21151793 - 21151862
Alignment:
Q  226 caatttctcagaactgactattcagaaggtagtttgtcttctgcgagtgagtgataagaaatggttgtgg 295  Q
    |||||| || |||||| ||  ||||||||||||||||||||||  ||||| ||||||||| ||| |||||    
T  21151793 caatttttctgaactggctgatcagaaggtagtttgtcttctgtcagtgaatgataagaagtggatgtgg 21151862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 21165096 - 21165205
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || || || ||| ||||| | ||| |||| ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  21165096 actattggtaattcctccatttcaattaataatgtgtggcttgtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 21165195  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  21165196 atgtaatgtt 21165205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 135
Target Start/End: Complemental strand, 27229102 - 27228997
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | |||||||||||||||||||| ||||| ||||    
T  27229102 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcataagtcaattttgtgacaatgggtatg 27229003  T
Q  130 atgtaa 135  Q
    ||||||    
T  27229002 atgtaa 27228997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 28724467 - 28724576
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || || || ||| ||||| | ||| |||| ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  28724467 actattggtaattcctccatttcaattaataatgtgtggcttgtagatggtctgacgcataacctattgagcattagtcaattttgtgacaatgggtatg 28724566  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  28724567 atgtaatgtt 28724576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 135
Target Start/End: Original strand, 34793366 - 34793471
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | |||||||||||||||||||| ||||| ||||    
T  34793366 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcataagtcaattttgtgacaatgggtatg 34793465  T
Q  130 atgtaa 135  Q
    ||||||    
T  34793466 atgtaa 34793471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 135
Target Start/End: Complemental strand, 35260668 - 35260563
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | |||||||||||||||||||| ||||| ||||    
T  35260668 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcataagtcaattttgtgacaatgggtatg 35260569  T
Q  130 atgtaa 135  Q
    ||||||    
T  35260568 atgtaa 35260563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 135
Target Start/End: Complemental strand, 35271293 - 35271188
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | |||||||||||||||||||| ||||| ||||    
T  35271293 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcataagtcaattttgtgacaatgggtatg 35271194  T
Q  130 atgtaa 135  Q
    ||||||    
T  35271193 atgtaa 35271188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 135
Target Start/End: Original strand, 39173243 - 39173348
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||||||| | ||||| |||||||||||||| ||||| ||||    
T  39173243 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataatctattgagcattagtcaattttgtgacaatgggtatg 39173342  T
Q  130 atgtaa 135  Q
    ||||||    
T  39173343 atgtaa 39173348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 24804868 - 24804908
Alignment:
Q  99 agcataagtcaattttgtgataatggatatgatgtaatgtt 139  Q
    ||||| |||||||||||||| ||||| ||||||||||||||    
T  24804868 agcatcagtcaattttgtgacaatgggtatgatgtaatgtt 24804908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 126
Target Start/End: Complemental strand, 27167108 - 27167072
Alignment:
Q  90 aatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  27167108 aatctacttagcataagtcaattgtgtgatagtggat 27167072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 29251815 - 29251775
Alignment:
Q  99 agcataagtcaattttgtgataatggatatgatgtaatgtt 139  Q
    ||||| |||||||||||||| ||||| ||||||||||||||    
T  29251815 agcattagtcaattttgtgacaatgggtatgatgtaatgtt 29251775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 17780694 - 17780585
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||  ||||| ||||| | || ||||| ||||  ||||| ||| | |||||||||||||||||||| ||||||||||    
T  17780694 actattggtaattcctccatctcaataaataatgtttggctagtagatggtctaaagcataacctattgagcataagtcaattttgtgacaatggatatg 17780595  T
Q  130 atgtaatgtt 139  Q
    |||| |||||    
T  17780594 atgttatgtt 17780585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 140
Target Start/End: Original strand, 19071633 - 19071744
Alignment:
Q  29 aactattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatat 128  Q
    ||||||||||||||| |||||||| ||| ||||| | ||||| || ||||| ||   |||||||||  | || || ||||| |||||||||||||| |||    
T  19071633 aactattggtaactcctctatctcaattaataatgtgtggttggtagatggtcttgaacataatctgttaagtatcagtcagttttgtgataatggttat 19071732  T
Q  129 gatgtaatgttt 140  Q
    ||||| ||||||    
T  19071733 gatgtgatgttt 19071744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 166
Target Start/End: Complemental strand, 19446994 - 19446858
Alignment:
Q  29 aactattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatat 128  Q
    ||||||||||||||| |||||||| ||| ||||| | ||||| || ||||| ||   |||||| ||  | || |||||||| |||||||| ||||| |||    
T  19446994 aactattggtaactcctctatctcaattaataatgtgtggttggtagatggtcttgaacataaccttttgagtataagtcagttttgtgacaatggttat 19446895  T
Q  129 gatgtaatgttttgataagaacaactgcttagtaatca 166  Q
    ||||| |||||| || |||| |||||||  ||||||||    
T  19446894 gatgtgatgtttgga-aagaccaactgcacagtaatca 19446858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 27501366 - 27501257
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| ||||  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  27501366 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctaaagcataacctattgagcattagtcaattttgtgacaatgggtatg 27501267  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  27501266 atgtaatgtt 27501257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 16901155 - 16901195
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  16901155 acataatctacttagcataagtcaattgtgtgatagtggat 16901195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 18163274 - 18163314
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  18163274 acataatctacttagcataagtcaattgtgtgatagtggat 18163314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 24929297 - 24929257
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  24929297 acataatctacttagcataagtcaattgtgtgatagtggat 24929257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 29562629 - 29562669
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  29562629 acataatctacttagcataagtcaattgtgtgatagtggat 29562669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 31360028 - 31360068
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  31360028 acataatctacttagcataagtcaattgtgtgatagtggat 31360068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 30 - 140
Target Start/End: Complemental strand, 22383679 - 22383569
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || || || ||  ||||| ||||| |||| ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  22383679 actattggtaattcctccatttcaataaataatgtttggcttgtagatggtctgacgcataacctattgagcatcagtcaattttgtgacaatgggtatg 22383580  T
Q  130 atgtaatgttt 140  Q
    |||||||||||    
T  22383579 atgtaatgttt 22383569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 9115632 - 9115741
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  9115632 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 9115731  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  9115732 atgtaatgtt 9115741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 14056524 - 14056633
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| ||||| || || ||| ||||| ||||| | || ||||| || |  ||||| ||| | |||||||||||||| ||||| ||||| ||||    
T  14056524 actattggtaattcttccatttcaattaataatgtttggctagtagatggtctgaagcataacctattgagcataagtcaattctgtgacaatgggtatg 14056623  T
Q  130 atgtaatgtt 139  Q
    |||| |||||    
T  14056624 atgtgatgtt 14056633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 14062653 - 14062762
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| ||||| || || ||| ||||| ||||| | || ||||| || |  ||||| ||| | |||||||||||||| ||||| ||||| ||||    
T  14062653 actattggtaattcttccatttcaattaataatgtttggctagtagatggtctgaagcataacctattgagcataagtcaattctgtgacaatgggtatg 14062752  T
Q  130 atgtaatgtt 139  Q
    |||| |||||    
T  14062753 atgtgatgtt 14062762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 17611723 - 17611832
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || || |||||| ||||| ||||| |||| ||||| || |  ||||| ||| | || || | |||||||||||| ||||| ||||    
T  17611723 actattggtaattcctccatttctattaataatgtttggcttgtagatggtctgaagcataacctattgagaatcaatcaattttgtgacaatgggtatg 17611822  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  17611823 atgtaatgtt 17611832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 18827497 - 18827606
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || || || ||| ||||| ||||||| || ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  18827497 actattggtaattcctccatttcaattaataatgtttggttagtagatggtctgaagcataacctattgagcatcagtcaattttgtgacaatgggtatg 18827596  T
Q  130 atgtaatgtt 139  Q
    |||| |||||    
T  18827597 atgttatgtt 18827606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 20033062 - 20033171
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || || || ||| ||||| | ||| |||| ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  20033062 actattggtaattcctccatttcaattaataatgtgtggcttgtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 20033161  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  20033162 atgtaatgtt 20033171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 28254707 - 28254816
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  28254707 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 28254806  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  28254807 atgtaatgtt 28254816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 28333456 - 28333565
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  28333456 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 28333555  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  28333556 atgtaatgtt 28333565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 135
Target Start/End: Original strand, 34810301 - 34810406
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||||||||    
T  34810301 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatggatatg 34810400  T
Q  130 atgtaa 135  Q
    ||||||    
T  34810401 atgtaa 34810406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 26041188 - 26041148
Alignment:
Q  99 agcataagtcaattttgtgataatggatatgatgtaatgtt 139  Q
    ||||| |||||||||||||| ||||| ||||||||||||||    
T  26041188 agcattagtcaattttgtgacaatgggtatgatgtaatgtt 26041148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1684 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1684
Description:

Target: scaffold1684; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 156
Target Start/End: Complemental strand, 774 - 648
Alignment:
Q  29 aactattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatat 128  Q
    ||||||||||||||| ||||||| ||||  |||| | ||||| || ||||| || | |||||| ||  |||| || ||||| |||||||| ||||| |||    
T  774 aactattggtaactcctctatctgtattagtaatgtgtggttggtagatggtcttatacataaccttgttagtatcagtcagttttgtgacaatggttat 675  T
Q  129 gatgtaatgttttgataagaacaactgc 156  Q
    ||||| ||| |||||||||| |||||||    
T  674 gatgtgatg-tttgataagaccaactgc 648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 36; Significance: 0.00000000003; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 29 - 140
Target Start/End: Complemental strand, 6008 - 5897
Alignment:
Q  29 aactattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatat 128  Q
    |||||||||||||||||||||||| ||| ||||| | ||||| || ||||| ||   |||||| ||  | || |||||||| |||||||| ||||| |||    
T  6008 aactattggtaactcttctatctcaattaataatgtgtggttggtagatggtcttgaacataaccttttgagtataagtcagttttgtgacaatggttat 5909  T
Q  129 gatgtaatgttt 140  Q
    ||||| ||||||    
T  5908 gatgtgatgttt 5897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 36024 - 36133
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || || || ||| ||||| | |||||||| ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  36024 actattggtaattcctccatttcaattaataatgtgtggtttgtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 36123  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  36124 atgtaatgtt 36133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0682 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0682
Description:

Target: scaffold0682; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 139
Target Start/End: Original strand, 5230 - 5311
Alignment:
Q  58 ataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatgatgtaatgtt 139  Q
    ||||| ||||| |||| ||||| || | |||||| ||| | ||||| |||||||||||||| ||||| ||||||||||||||    
T  5230 ataatgtttggcttgtagatggtctgaaacataacctattgagcatcagtcaattttgtgacaatgggtatgatgtaatgtt 5311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 13262 - 13398
Alignment:
Q  29 aactattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatat 128  Q
    ||||||||||||||| |||||||| ||| ||||| | ||||| || ||||| ||   |||||| ||  | || || ||||| |||||||||||||| |||    
T  13262 aactattggtaactcctctatctcaattaataatgtgtggttggtagatggtcttgaacataaccttttaagtatcagtcagttttgtgataatggttat 13361  T
Q  129 gatgtaatgttttgataagaacaactgcttagtaatca 166  Q
    ||||| |||||| || |||| |||||||  ||||||||    
T  13362 gatgtgatgtttgga-aagaccaactgcaaagtaatca 13398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 29 - 166
Target Start/End: Original strand, 17935 - 18071
Alignment:
Q  29 aactattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatat 128  Q
    ||||||||||||||| |||||||| ||| ||||| | ||||| || ||||| ||   |||||| ||  | || || ||||| |||||||||||||| |||    
T  17935 aactattggtaactcctctatctcaattaataatgtgtggttggtagatggtcttgaacataaccttttaagtatcagtcagttttgtgataatggttat 18034  T
Q  129 gatgtaatgttttgataagaacaactgcttagtaatca 166  Q
    ||||| |||||| || |||| |||||||  ||||||||    
T  18035 gatgtgatgtttgga-aagaccaactgcaaagtaatca 18071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 34; Significance: 0.0000000004; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 20555067 - 20555176
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || || || ||| ||||| | ||| |||| ||||| || |  ||||||||| | ||||| |||||||||||||| ||||| ||||    
T  20555067 actattggtaattcctccatttcaattaataatgtgtggcttgtagatggtctgaagcataatctattgagcattagtcaattttgtgacaatgggtatg 20555166  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  20555167 atgtaatgtt 20555176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 135
Target Start/End: Original strand, 23299529 - 23299634
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| ||||| | || ||||| || |  ||||| ||| | |||||||||||||||||||| ||||| ||||    
T  23299529 actattggtaattcctccatctcaattaataatgtttggctagtagatggtctgaagcataacctattgagcataagtcaattttgtgacaatgggtatg 23299628  T
Q  130 atgtaa 135  Q
    ||||||    
T  23299629 atgtaa 23299634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 34775161 - 34775270
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| |||| ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  34775161 actattggtaattcctccatctcaattaataatgtgtggcttgtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 34775260  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  34775261 atgtaatgtt 34775270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 18382949 - 18382989
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  18382949 acataatctacttagcataagtcaattgtgtgatagtggat 18382989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 26199457 - 26199417
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  26199457 acataatctacttagcataagtcaattgtgtgatagtggat 26199417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 27415357 - 27415397
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  27415357 acataatctacttagcataagtcaattgtgtgatagtggat 27415397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 33942529 - 33942569
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  33942529 acataatctacttagcataagtcaattgtgtgatagtggat 33942569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 1118911 - 1118802
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    |||||||||||||| || || || ||| ||||| | ||| | || ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  1118911 actattggtaactcctccatttcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 1118812  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  1118811 atgtaatgtt 1118802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 5298151 - 5298042
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| |||| ||||| || |  ||||| ||| | ||| | |||||||||||||| ||||| ||||    
T  5298151 actattggtaattcctccatctcaattaataatgtgtggcttgtagatggtctgaagcataacctattgagcgttagtcaattttgtgacaatgggtatg 5298052  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  5298051 atgtaatgtt 5298042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 135
Target Start/End: Original strand, 6979058 - 6979163
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||||||| | ||||| |||||||||||||| ||||| ||||    
T  6979058 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataatctattgagcattagtcaattttgtgacaatgggtatg 6979157  T
Q  130 atgtaa 135  Q
    ||||||    
T  6979158 atgtaa 6979163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 135
Target Start/End: Original strand, 9339206 - 9339311
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | |||||||||||||||||||| ||||| ||||    
T  9339206 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcataagtcaattttgtgacaatgggtatg 9339305  T
Q  130 atgtaa 135  Q
    ||||||    
T  9339306 atgtaa 9339311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 23399164 - 23399273
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || || || ||| ||||| | ||| |||| ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  23399164 actattggtaattcctccatttcaattaataatgtgtggcttgtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 23399263  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  23399264 atgtaatgtt 23399273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 135
Target Start/End: Original strand, 23700032 - 23700137
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | |||||||||||||||||||| ||||| ||||    
T  23700032 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcataagtcaattttgtgacaatgggtatg 23700131  T
Q  130 atgtaa 135  Q
    ||||||    
T  23700132 atgtaa 23700137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 24944187 - 24944078
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || || || ||| ||||| | ||| |||| ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  24944187 actattggtaattcctccatttcaattaataatgtgtggcttgtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 24944088  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  24944087 atgtaatgtt 24944078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 27619781 - 27619672
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  27619781 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 27619682  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  27619681 atgtaatgtt 27619672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 135
Target Start/End: Complemental strand, 30235035 - 30234930
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | |||||||||||||||||||| ||||| ||||    
T  30235035 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcataagtcaattttgtgacaatgggtatg 30234936  T
Q  130 atgtaa 135  Q
    ||||||    
T  30234935 atgtaa 30234930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 31443143 - 31443252
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| |||| ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| |||     
T  31443143 actattggtaattcctccatctcaattaataatgtgtggcttgtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtata 31443242  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  31443243 atgtaatgtt 31443252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 135
Target Start/End: Complemental strand, 36590126 - 36590021
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | |||||||||||||||||||| ||||| ||||    
T  36590126 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcataagtcaattttgtgacaatgggtatg 36590027  T
Q  130 atgtaa 135  Q
    ||||||    
T  36590026 atgtaa 36590021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 37737576 - 37737467
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  37737576 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 37737477  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  37737476 atgtaatgtt 37737467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 135
Target Start/End: Complemental strand, 39498496 - 39498391
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||||||| | ||||| |||||||||||||| ||||| ||||    
T  39498496 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataatctattgagcattagtcaattttgtgacaatgggtatg 39498397  T
Q  130 atgtaa 135  Q
    ||||||    
T  39498396 atgtaa 39498391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 135
Target Start/End: Original strand, 42046032 - 42046137
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | |||||||||||||||||||| ||||| ||||    
T  42046032 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcataagtcaattttgtgacaatgggtatg 42046131  T
Q  130 atgtaa 135  Q
    ||||||    
T  42046132 atgtaa 42046137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 126
Target Start/End: Original strand, 20951074 - 20951110
Alignment:
Q  90 aatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  20951074 aatctacttagcataagtcaattgtgtgatagtggat 20951110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 29 - 165
Target Start/End: Original strand, 21202219 - 21202354
Alignment:
Q  29 aactattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatat 128  Q
    ||||||||||||||| |||||||| ||  ||||| | ||||| || ||||| ||   |||||| ||  | || |||||||| |||||||| ||||| |||    
T  21202219 aactattggtaactcctctatctcaatgaataatgtgtggttggtagatggtcttgaacataaccttttgagtataagtcagttttgtgacaatggttat 21202318  T
Q  129 gatgtaatgttttgataagaacaactgcttagtaatc 165  Q
    ||||| ||| ||||| |||| |||||||  |||||||    
T  21202319 gatgtgatg-tttgaaaagaccaactgcaaagtaatc 21202354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 135
Target Start/End: Complemental strand, 23485723 - 23485687
Alignment:
Q  99 agcataagtcaattttgtgataatggatatgatgtaa 135  Q
    |||||||||||||||||||| ||||| ||||||||||    
T  23485723 agcataagtcaattttgtgacaatgggtatgatgtaa 23485687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 39355817 - 39355857
Alignment:
Q  99 agcataagtcaattttgtgataatggatatgatgtaatgtt 139  Q
    ||||| |||||||||||||| ||||| ||||||||||||||    
T  39355817 agcattagtcaattttgtgacaatgggtatgatgtaatgtt 39355857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 40393683 - 40393723
Alignment:
Q  99 agcataagtcaattttgtgataatggatatgatgtaatgtt 139  Q
    ||||| |||||||||||||| ||||| ||||||||||||||    
T  40393683 agcattagtcaattttgtgacaatgggtatgatgtaatgtt 40393723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 34; Significance: 0.0000000004; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 226 - 295
Target Start/End: Original strand, 21127719 - 21127788
Alignment:
Q  226 caatttctcagaactgactattcagaaggtagtttgtcttctgcgagtgagtgataagaaatggttgtgg 295  Q
    |||||| || |||||| ||  ||||||||||||||||||||||  ||||| ||||||||||||| |||||    
T  21127719 caatttttctgaactggctgatcagaaggtagtttgtcttctgtcagtgaatgataagaaatggatgtgg 21127788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 22652357 - 22652248
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || || || ||  ||||| ||||| |||| ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||||||||    
T  22652357 actattggtaattcctccatttcaataaataatgtttggcttgtagatggtctgaagcataacctattgagcatcagtcaattttgtgacaatggatatg 22652258  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  22652257 atgtaatgtt 22652248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 35641212 - 35641321
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | |||||||||||||||||||| ||||| ||||    
T  35641212 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcataagtcaattttgtgacaatgggtatg 35641311  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  35641312 atgtaatgtt 35641321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 3179251 - 3179142
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  3179251 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 3179152  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  3179151 atgtaatgtt 3179142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 4174951 - 4174842
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  4174951 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 4174852  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  4174851 atgtaatgtt 4174842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 5642879 - 5642988
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  5642879 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 5642978  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  5642979 atgtaatgtt 5642988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 135
Target Start/End: Complemental strand, 7514924 - 7514819
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||||||| | ||||| |||||||||||||| ||||| ||||    
T  7514924 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataatctattgagcattagtcaattttgtgacaatgggtatg 7514825  T
Q  130 atgtaa 135  Q
    ||||||    
T  7514824 atgtaa 7514819  T

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Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 7692646 - 7692755
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || || || ||| ||||| | ||| |||| ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  7692646 actattggtaattcctccatttcaattaataatgtgtggcttgtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 7692745  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  7692746 atgtaatgtt 7692755  T

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Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Complemental strand, 19184855 - 19184746
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  19184855 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 19184756  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  19184755 atgtaatgtt 19184746  T

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Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 135
Target Start/End: Original strand, 36239605 - 36239710
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | |||||||||||||||||||| ||||| ||||    
T  36239605 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcataagtcaattttgtgacaatgggtatg 36239704  T
Q  130 atgtaa 135  Q
    ||||||    
T  36239705 atgtaa 36239710  T

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Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 135
Target Start/End: Complemental strand, 38102735 - 38102630
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || ||||| ||| ||||| | ||| | || ||||| || |  ||||| ||| | |||||||||||||||||||| ||||| ||||    
T  38102735 actattggtaattcctccatctcaattaataatgtgtggctagtagatggtctgaagcataacctattgagcataagtcaattttgtgacaatgggtatg 38102636  T
Q  130 atgtaa 135  Q
    ||||||    
T  38102635 atgtaa 38102630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 16158092 - 16158132
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| || |||| |||||    
T  16158092 acataatctacttagcataagtcaattgtgcgatagtggat 16158132  T

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Target: scaffold0611 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0611
Description:

Target: scaffold0611; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 1253 - 1293
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  1253 acataatctacttagcataagtcaattgtgtgatagtggat 1293  T

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Target: scaffold0254 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 4699 - 4659
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  4699 acataatctacttagcataagtcaattgtgtgatagtggat 4659  T

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Target: scaffold0142 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 34033 - 33993
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  34033 acataatctacttagcataagtcaattatgtgatagtggat 33993  T

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Target: scaffold0058 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Complemental strand, 51715 - 51675
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  51715 acataatctacttagcataagtcaattgtgtgatagtggat 51675  T

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Target: scaffold0014 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 126
Target Start/End: Original strand, 149884 - 149924
Alignment:
Q  86 acataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||||| ||||||| |||||    
T  149884 acataatctacttagcataagtcaattgtgtgatagtggat 149924  T

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Target: scaffold0389 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 105 - 164
Target Start/End: Complemental strand, 11667 - 11609
Alignment:
Q  105 agtcaattttgtgataatggatatgatgtaatgttttgataagaacaactgcttagtaat 164  Q
    |||||||||||||||||||| |||||||| |||||| || |||| ||||||| |||||||    
T  11667 agtcaattttgtgataatggttatgatgtgatgtttgga-aagaccaactgcatagtaat 11609  T

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Target: scaffold0211 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 60 - 139
Target Start/End: Original strand, 2880 - 2959
Alignment:
Q  60 aatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatgatgtaatgtt 139  Q
    ||||||||| |||| ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||||||||||||    
T  2880 aatatttggcttgtagatggtctgaagcataacctattgagcatcagtcaattttgtgacaatgggtatgatgtaatgtt 2959  T

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Target: scaffold0183 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 29 - 140
Target Start/End: Complemental strand, 8015 - 7904
Alignment:
Q  29 aactattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatat 128  Q
    ||||||||||||||| |||||||||||| ||||| | ||||| || ||||| ||   |||||| ||  | || || ||||| |||||||| ||||| |||    
T  8015 aactattggtaactcctctatctctattaataatgtgtggttggtagatggtcttgaacataaccttttaagtatcagtcagttttgtgacaatggttat 7916  T
Q  129 gatgtaatgttt 140  Q
    ||||| ||||||    
T  7915 gatgtgatgttt 7904  T

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Target: scaffold0141 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 126
Target Start/End: Original strand, 29155 - 29193
Alignment:
Q  88 ataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  29155 ataatctacttagcataagtcaattgtgtgatagtggat 29193  T

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Target: scaffold0049 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 88 - 126
Target Start/End: Complemental strand, 85657 - 85619
Alignment:
Q  88 ataatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  85657 ataatctacttagcataagtcaattgtgtgatagtggat 85619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0382 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0382
Description:

Target: scaffold0382; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 139
Target Start/End: Original strand, 4454 - 4563
Alignment:
Q  30 actattggtaactcttctatctctattcataatatttggtttgttgatggactaagacataatctacttagcataagtcaattttgtgataatggatatg 129  Q
    ||||||||||| || || || || ||| ||||| ||||| | || ||||| || |  ||||| ||| | ||||| |||||||||||||| ||||| ||||    
T  4454 actattggtaattcctccatttcaattaataatgtttggctagtagatggtctgaagcataacctattgagcattagtcaattttgtgacaatgggtatg 4553  T
Q  130 atgtaatgtt 139  Q
    ||||||||||    
T  4554 atgtaatgtt 4563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0382; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 12906 - 12946
Alignment:
Q  99 agcataagtcaattttgtgataatggatatgatgtaatgtt 139  Q
    ||||| |||||||||||||| ||||| ||||||||||||||    
T  12906 agcattagtcaattttgtgacaatgggtatgatgtaatgtt 12946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0313 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0313
Description:

Target: scaffold0313; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 126
Target Start/End: Original strand, 12770 - 12806
Alignment:
Q  90 aatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||||||||||||||| ||||||| |||||    
T  12770 aatctacttagcataagtcaattatgtgatagtggat 12806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 46184 - 46224
Alignment:
Q  99 agcataagtcaattttgtgataatggatatgatgtaatgtt 139  Q
    ||||| |||||||||||||| ||||| ||||||||||||||    
T  46184 agcattagtcaattttgtgacaatgggtatgatgtaatgtt 46224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 29; Significance: 0.0000004; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 4747 - 4787
Alignment:
Q  99 agcataagtcaattttgtgataatggatatgatgtaatgtt 139  Q
    |||||||||||||||||||| ||||| |||||||| |||||    
T  4747 agcataagtcaattttgtgacaatgggtatgatgttatgtt 4787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 135343 - 135303
Alignment:
Q  99 agcataagtcaattttgtgataatggatatgatgtaatgtt 139  Q
    ||||| |||||||||||||| ||||| ||||||||||||||    
T  135343 agcatcagtcaattttgtgacaatgggtatgatgtaatgtt 135303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 90 - 126
Target Start/End: Original strand, 148225 - 148261
Alignment:
Q  90 aatctacttagcataagtcaattttgtgataatggat 126  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  148225 aatctacttagtataagtcaattgtgtgataatggat 148261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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