View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5201_low_31 (Length: 233)
Name: NF5201_low_31
Description: NF5201
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5201_low_31 |
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Alignment Details
Target: chr4 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 21 - 217
Target Start/End: Original strand, 13456414 - 13456610
Alignment:
| Q |
21 |
acactaccaccaccgcaacaacacaaaaacgatgtcgttttcaacggagaagaagaatcatcattctcagaaagaaaaccctaaccctaaccctaattcg |
120 |
Q |
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| T |
13456414 |
acactaccaccaccgcaacaacacaaaaacgatgtcgttttcaacggagaagaagaatcatcattctcagaaagaaaaccctaaccctaaccctaattcg |
13456513 |
T |
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| Q |
121 |
ccattgaagaaactaggaacacggtggtctgatttatggctaaaacacaccaaatcaaagcctttaaaccaaatcgttgttgctgctgcaatgcaac |
217 |
Q |
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| T |
13456514 |
ccattgaagaaactaggaacacggtggtctgatttatggctaaaacacaccaaatcaaaacctttaaaccaaatcgttgttgctgctgcaatgcaac |
13456610 |
T |
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