View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5202-Insertion-7 (Length: 327)
Name: NF5202-Insertion-7
Description: NF5202
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5202-Insertion-7 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 76 - 327
Target Start/End: Complemental strand, 19172701 - 19172450
Alignment:
| Q |
76 |
tgttgaaatcagtattcaacagacagaaacaacacacatcatcatcttcatcatcgacgtcgcgtccattcaaagaatactacacagaatggttcaacac |
175 |
Q |
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| T |
19172701 |
tgttgaaatcagtattcaacagacagaaacaacacacatcatcatcttcatcatcgacgtcgcgtccattcaaagaatactacacagaatggttcaacac |
19172602 |
T |
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| Q |
176 |
actcaagaacaatcacctcccattactccgtcgttctatctccggcgcctccttaaccctcctctcaactcacgttgagctcatccaccaacacttccaa |
275 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
19172601 |
actcaagaacaatcacctcccattactccgtcgttctatctccggcgactccttaaccctcctctcaactcacgttgagctcatccaccaacacttccaa |
19172502 |
T |
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| Q |
276 |
tcttactaccacaccctcgacgcagctgcaaccacagacccttctcaaatcc |
327 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
19172501 |
tcttactaccacaccctcgacgcagctgcaatcacagacccttctcaaatcc |
19172450 |
T |
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