View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5202_high_9 (Length: 253)
Name: NF5202_high_9
Description: NF5202
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5202_high_9 |
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Alignment Details
Target: chr8 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 10565637 - 10565883
Alignment:
| Q |
1 |
ccaatgcaaaacagtactattattcatagaagggttttgtgcccttatgggtagatattgtacaaacttaactctcccttttttgtctttcgatcaacat |
100 |
Q |
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| T |
10565637 |
ccaatgcaaaacagtactattattcatagaagggttttgtgcccttatgggtagatattgtacaaacttaactctcccttttttgtctttcgatcaacat |
10565736 |
T |
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| Q |
101 |
caatggctacatatatgacaatgaaagaagattaattaga-aataaaattgccaccaaaccaacagtttgcccaatagggaaagtgtaacaagagtgaga |
199 |
Q |
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|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10565737 |
caatggctacatatatgacaatgaaagaagattaattagacaataaaattgccaccaaaccaacagtttgcccaatagggaaagtgtaacaagagtgaga |
10565836 |
T |
|
| Q |
200 |
ggaccacaattatccttattggaccacttcttttagtagaataatct |
246 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10565837 |
ggaccacaattatccttattggaccacttcttttagtagaataatct |
10565883 |
T |
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