View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5202_low_12 (Length: 244)
Name: NF5202_low_12
Description: NF5202
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5202_low_12 |
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Alignment Details
Target: chr2 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 31 - 129
Target Start/End: Original strand, 29974834 - 29974931
Alignment:
| Q |
31 |
agatgttatcatccaaagtcaatttaactattcaatttggccagacatttttcacgataaaattcccttaacaagcatgttcttttttaaatctacccc |
129 |
Q |
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| T |
29974834 |
agatgttgtcatccaaagtcaatttaaccattcattttggcaagacatttttcatgataaaattcccttaacaagcatgttc-tttttaaatctacccc |
29974931 |
T |
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