View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5204_high_21 (Length: 215)
Name: NF5204_high_21
Description: NF5204
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5204_high_21 |
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Alignment Details
Target: chr6 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 18 - 160
Target Start/End: Original strand, 21185351 - 21185493
Alignment:
| Q |
18 |
atgaaattgaacatcaagtcttagtatattaatattcatgatagcagagatatttggtggaaacaactccaaattgaaggtataccactcgaagtattat |
117 |
Q |
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| T |
21185351 |
atgaaattgaacatcaagtcttagtatattaatattcatgatagcagagatatttggtggaaacaactccaaattgaaggtataccactcgaagtattat |
21185450 |
T |
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| Q |
118 |
aagtacattaatataacaatataatttgtaaaataaaaaagaa |
160 |
Q |
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||||||||||||||| |||||||||||||||||| |||||||| |
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| T |
21185451 |
aagtacattaatatagcaatataatttgtaaaatgaaaaagaa |
21185493 |
T |
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