View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5207_low_2 (Length: 305)
Name: NF5207_low_2
Description: NF5207
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5207_low_2 |
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Alignment Details
Target: chr8 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 18 - 288
Target Start/End: Original strand, 7527035 - 7527305
Alignment:
| Q |
18 |
attagattaatacactacttgacgaagggttagagatggattatttcaagtgctatccaagatgttaactaacccatactcaaaaagaaaagttagacta |
117 |
Q |
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| T |
7527035 |
attagattaatacactacttgacgaagggttagagatggattatttcaagtgctatccaagatgttaactaacccatactcaaaaagaaaagttagacta |
7527134 |
T |
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| Q |
118 |
tcccatgaatacagtgttaattagttttaacttttaatgtggagaaacacttcaagtgataaatcgaccaatgacatgggcacatactaagaaagataag |
217 |
Q |
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||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7527135 |
tcccatgaatacagtgttaattagtgttaacttttaatgtggagaaacacttcaagggataaatcgaccaatgacatgggcacatactaagaaagataag |
7527234 |
T |
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| Q |
218 |
gagatcttacactaaatggtgacaatgaagtataatcaaagtaagacctaaactgaaatgaattaagcagt |
288 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
7527235 |
gagatcttacactaaatggtgacaatgaagtataatcaaagtaagacctaaactcaaatgaattaagcagt |
7527305 |
T |
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