View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5207_low_4 (Length: 237)
Name: NF5207_low_4
Description: NF5207
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5207_low_4 |
 | |
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| [»] chr4 (5 HSPs) |
| |
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| [»] chr8 (6 HSPs) |
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| [»] chr7 (13 HSPs) |
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| [»] chr5 (9 HSPs) |
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| [»] scaffold0611 (1 HSPs) |
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| [»] chr6 (9 HSPs) |
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| [»] chr3 (4 HSPs) |
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| [»] scaffold0058 (1 HSPs) |
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| [»] scaffold0014 (1 HSPs) |
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| [»] chr1 (4 HSPs) |
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| [»] scaffold0254 (1 HSPs) |
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| [»] scaffold0313 (2 HSPs) |
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| [»] scaffold0016 (1 HSPs) |
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| [»] scaffold0141 (2 HSPs) |
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| [»] scaffold0049 (1 HSPs) |
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| [»] scaffold0015 (1 HSPs) |
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| [»] scaffold0529 (1 HSPs) |
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| [»] scaffold0010 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 205; Significance: 1e-112; HSPs: 5)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 16255124 - 16254888
Alignment:
| Q |
1 |
tcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctc |
100 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
16255124 |
tcatcatcagcaactgatgaactttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctc |
16255025 |
T |
|
| Q |
101 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaa |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
16255024 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctaagtaattacagtgaccataggtctccacatacttggaagacatctcaa |
16254925 |
T |
|
| Q |
201 |
tatttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
||||||||| ||||||||||||| ||||||||||||| |
|
|
| T |
16254924 |
tatttttctgattctatcatgagtagaatatgccttt |
16254888 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 6694106 - 6693873
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||| | |
|
|
| T |
6694106 |
tcatcagcaactgatgaggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctta |
6694007 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| || |
|
|
| T |
6694006 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcagaat |
6693907 |
T |
|
| Q |
204 |
ttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| |
|
|
| T |
6693906 |
ttttctaattctatcatgagtggaatatgccttt |
6693873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 17151264 - 17151028
Alignment:
| Q |
1 |
tcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctc |
100 |
Q |
| |
|
||||||||| | |||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
17151264 |
tcatcatcagctactgatgaggtttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctc |
17151165 |
T |
|
| Q |
101 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaa |
200 |
Q |
| |
|
| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| | ||||| ||||||||| || |
|
|
| T |
17151164 |
ttagtgaaccaatgagatcttccaggttcatagattataaatctttggcctgagtaattgcattgaccataggtctccaaacacttggaagacatcttaa |
17151065 |
T |
|
| Q |
201 |
tatttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
|||||||||||||| | |||||| ||||||||||||| |
|
|
| T |
17151064 |
tatttttctaattcaaacatgagtagaatatgccttt |
17151028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 13 - 232
Target Start/End: Original strand, 520375 - 520594
Alignment:
| Q |
13 |
actgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
112 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||| || |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
520375 |
actgatgaggtttgctgagaggctttcaaggcaagtgactttaccttctttactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
520474 |
T |
|
| Q |
113 |
tgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatatttttctaat |
212 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |
|
|
| T |
520475 |
tgagatcttccaggttcatagatttcaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcaatatttttctgat |
520574 |
T |
|
| Q |
213 |
tctatcatgaggagaatatg |
232 |
Q |
| |
|
||| ||||||| ||||||| |
|
|
| T |
520575 |
tctctcatgagtggaatatg |
520594 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 7844908 - 7845144
Alignment:
| Q |
1 |
tcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctc |
100 |
Q |
| |
|
||||||||| | ||| |||| ||||| |||||||||||||| |||||||| || ||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
7844908 |
tcatcatcagctactaatgagctttgttgagatgctttcaatgcaagtgtctttaccttcttcactggtttgtctccttgaagtacaacttcatgagctc |
7845007 |
T |
|
| Q |
101 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaa |
200 |
Q |
| |
|
||| ||| |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||||| || |
|
|
| T |
7845008 |
tcaatgagccaatgagatcttctagattcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccatacacttggaagacatcttaa |
7845107 |
T |
|
| Q |
201 |
tatttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
||||||||| |||||||||| || |||||| |||||| |
|
|
| T |
7845108 |
tatttttctgattctatcataagtagaataagccttt |
7845144 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 201; Significance: 1e-110; HSPs: 6)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 14892202 - 14892438
Alignment:
| Q |
1 |
tcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctc |
100 |
Q |
| |
|
||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
14892202 |
tcatcatcagctactgatgagctttgctgagatgctttcaaggcaagtgttttcaccttcttcactggtttgtctccttgaagtacaacttcatgagctc |
14892301 |
T |
|
| Q |
101 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaa |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
14892302 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatcttctgcctgagtaattgcagtgaccataggtctccacatacttggaagacatctcaa |
14892401 |
T |
|
| Q |
201 |
tatttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
||||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
14892402 |
tatttttctaattctatcatgagtagaatataccttt |
14892438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 4 - 237
Target Start/End: Original strand, 21211423 - 21211656
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||| | |
|
|
| T |
21211423 |
tcatcatcaactgatgaggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctta |
21211522 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| || |
|
|
| T |
21211523 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcagaat |
21211622 |
T |
|
| Q |
204 |
ttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| |
|
|
| T |
21211623 |
ttttctaattctatcatgagtggaatatgccttt |
21211656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 22832630 - 22832394
Alignment:
| Q |
1 |
tcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctc |
100 |
Q |
| |
|
||||||||| | |||||||| |||||||||| |||||||||||||||| ||| ||||||||||| |||||||||||||||||||| |||||| |||||| |
|
|
| T |
22832630 |
tcatcatcagctactgatgaggtttgctgagaggctttcaaggcaagtgattttaccttcttcactggtttgtctccttgaagtactacttcaggagctc |
22832531 |
T |
|
| Q |
101 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaa |
200 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||||||| ||| |||||||||| |
|
|
| T |
22832530 |
tcagtgaaccaatgagatcttcaaggttcatagatttcaaatctttggcctgagtgattgcagtgacgataggtctccacataattggaagacatctcgg |
22832431 |
T |
|
| Q |
201 |
tatttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
|| |||| ||||| ||||||| |||||||||||| |
|
|
| T |
22832430 |
aatctttccgattctttcatgagtggaatatgccttt |
22832394 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 18234114 - 18234019
Alignment:
| Q |
136 |
tttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatatttttctaattctatcatgaggagaatat |
231 |
Q |
| |
|
||||| |||||||| ||||| ||||| || |||||||||||||| || ||| |||||||| ||||||||||| ||||| |||||||| |||||| |
|
|
| T |
18234114 |
tttaagtctttggcttgagtgattgctgtaaccataggtctccatgtatttgggagacatcttaatatttttctgattctgtcatgaggggaatat |
18234019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 18243565 - 18243470
Alignment:
| Q |
136 |
tttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatatttttctaattctatcatgaggagaatat |
231 |
Q |
| |
|
||||| |||||||| ||||| ||||| || |||||||||||||| || ||| |||||||| ||||||||||| ||||| |||||||| |||||| |
|
|
| T |
18243565 |
tttaagtctttggcttgagtgattgctgtaaccataggtctccatgtatttgggagacatcttaatatttttctgattctgtcatgaggggaatat |
18243470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 223
Target Start/End: Complemental strand, 12916743 - 12916656
Alignment:
| Q |
136 |
tttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatatttttctaattctatcatgag |
223 |
Q |
| |
|
|||| ||||||| | ||||| ||||| || |||||||||||||| | ||| |||||||| ||||||||||||||||| ||||||| |
|
|
| T |
12916743 |
tttagatctttgtcttgagtgattgctgtaaccataggtctccatgtgtttgggagacatcttaatatttttctaattctgtcatgag |
12916656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 182; Significance: 2e-98; HSPs: 13)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 6536372 - 6536139
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||| | |
|
|
| T |
6536372 |
tcatcagcaactgatgaggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctta |
6536273 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| || |
|
|
| T |
6536272 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcagaat |
6536173 |
T |
|
| Q |
204 |
ttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| |
|
|
| T |
6536172 |
ttttctaattctatcatgagtggaatatgccttt |
6536139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 9543690 - 9543926
Alignment:
| Q |
1 |
tcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctc |
100 |
Q |
| |
|
||||| ||| || ||||||| ||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
9543690 |
tcatcttcagcagctgatgagctttgctgagatgcttttaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctc |
9543789 |
T |
|
| Q |
101 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaa |
200 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| ||||||||| | |
|
|
| T |
9543790 |
tcagtgaaccaataagatcttccaggttcatagattttaaatctttggcctgggtgattgcagtgaccataggtctccacatacttggaagacatcttag |
9543889 |
T |
|
| Q |
201 |
tatttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
9543890 |
tatttttctaattctatcatgagtagaatatgccttt |
9543926 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 4 - 237
Target Start/End: Original strand, 5389624 - 5389857
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||| | |
|
|
| T |
5389624 |
tcatcagcaactgatggggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctta |
5389723 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| || |
|
|
| T |
5389724 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcagaat |
5389823 |
T |
|
| Q |
204 |
ttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| |
|
|
| T |
5389824 |
ttttctaattctatcatgagtggaatatgccttt |
5389857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 8502937 - 8502704
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||||||||||||||| | |||||||| || ||||||||||||||||||||||||||||||||||| | |
|
|
| T |
8502937 |
tcatcagcaactgatgaggtttgctgagatgctttcaaggcaagtgttcttaccttctttactggtttgtctccttgaagtacaacttcatgagctctta |
8502838 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| || |
|
|
| T |
8502837 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcagaat |
8502738 |
T |
|
| Q |
204 |
ttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| |
|
|
| T |
8502737 |
ttttctaattctatcatgagtggaatatgccttt |
8502704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 26305444 - 26305211
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||| | |
|
|
| T |
26305444 |
tcatcagcaactgatggggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctta |
26305345 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| || |
|
|
| T |
26305344 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcagaat |
26305245 |
T |
|
| Q |
204 |
ttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| |
|
|
| T |
26305244 |
ttttctaattctatcatgagtggaatatgccttt |
26305211 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 4 - 237
Target Start/End: Original strand, 26361374 - 26361607
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||| | |
|
|
| T |
26361374 |
tcatcagcaactgatggggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctta |
26361473 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| || |
|
|
| T |
26361474 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcagaat |
26361573 |
T |
|
| Q |
204 |
ttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| |
|
|
| T |
26361574 |
ttttctaattctatcatgagtggaatatgccttt |
26361607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 32100268 - 32100035
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||| | |
|
|
| T |
32100268 |
tcatcagcaactgatggggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctta |
32100169 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| || |
|
|
| T |
32100168 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcagaat |
32100069 |
T |
|
| Q |
204 |
ttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| |
|
|
| T |
32100068 |
ttttctaattctatcatgagtggaatatgccttt |
32100035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 44899187 - 44898954
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||||||||||||||| | |||||||| || ||||||||||||||||||||||||||||||||||| | |
|
|
| T |
44899187 |
tcatcagcaactgatgaggtttgctgagatgctttcaaggcaagtgttcttaccttctttactggtttgtctccttgaagtacaacttcatgagctctta |
44899088 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| || |
|
|
| T |
44899087 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcagaat |
44898988 |
T |
|
| Q |
204 |
ttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| |
|
|
| T |
44898987 |
ttttctaattctatcatgagtggaatatgccttt |
44898954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 4 - 237
Target Start/End: Original strand, 16140637 - 16140870
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| | |
|
|
| T |
16140637 |
tcatcagcaactgatggggtttgctgagatgcttttaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctta |
16140736 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||| || |
|
|
| T |
16140737 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacatctcagaat |
16140836 |
T |
|
| Q |
204 |
ttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| |
|
|
| T |
16140837 |
ttttctaattctatcatgagtggaatatgccttt |
16140870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 46499002 - 46498769
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| ||||||||| | |||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| | |
|
|
| T |
46499002 |
tcatcagcaactgatggagtttgctgagatgcttttaaggcaagtgtttttaccttcttcactggtttgtctccttaaagtacaacttcatgagctctta |
46498903 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||| || |
|
|
| T |
46498902 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacatctcagaat |
46498803 |
T |
|
| Q |
204 |
ttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| |
|
|
| T |
46498802 |
ttttctaattctatcatgagtggaatatgccttt |
46498769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 13 - 237
Target Start/End: Complemental strand, 42597237 - 42597013
Alignment:
| Q |
13 |
actgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
112 |
Q |
| |
|
|||||||| |||| ||||| |||||||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
42597237 |
actgatgaggtttgttgagaggctttcaaggcaagtgactttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctcagtgaacaaa |
42597138 |
T |
|
| Q |
113 |
tgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatatttttctaat |
212 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||| ||||||||| ||| ||||||||||||||||| || |
|
|
| T |
42597137 |
tgagatcttccaggttcatagatttcaaatctttggcctcagtgattgcagtgaccataggtctctacatacttggaaggcatctcaatatttttctgat |
42597038 |
T |
|
| Q |
213 |
tctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
||| ||||||| |||||||||||| |
|
|
| T |
42597037 |
tctctcatgagtggaatatgccttt |
42597013 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 13 - 236
Target Start/End: Original strand, 13283892 - 13284115
Alignment:
| Q |
13 |
actgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
112 |
Q |
| |
|
||||||||| ||| |||||| |||||||||||||||| || |||||||| || |||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
13283892 |
actgatgaagtttactgagaggctttcaaggcaagtgactttaccttctttactagtttgtctccttgaagtacaacttcatgagctctaagtgaaccaa |
13283991 |
T |
|
| Q |
113 |
tgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatatttttctaat |
212 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||||||||||| ||| ||||| ||||||||||| || |
|
|
| T |
13283992 |
tgagatcttccaggttcatagatttcaaatctttggcctgagtgattgaagtgaccataggtctccacatacttggaaggcatcttaatatttttctgat |
13284091 |
T |
|
| Q |
213 |
tctatcatgaggagaatatgcctt |
236 |
Q |
| |
|
||| ||||||| || |||||||| |
|
|
| T |
13284092 |
tctctcatgagtggagtatgcctt |
13284115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 56 - 224
Target Start/End: Original strand, 14643285 - 14643453
Alignment:
| Q |
56 |
ccttcttcaccggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagt |
155 |
Q |
| |
|
|||| ||||||||||| ||| |||| |||| || |||||||||||| || | ||||| ||||| || ||| || || |||| ||||||||| ||||| |
|
|
| T |
14643285 |
cctttttcaccggtttatcttcttggagtagaatttcatgagctctaagcgttccaataagatcctctagggccaaggaatttagatctttggcttgagt |
14643384 |
T |
|
| Q |
156 |
aattgcagtgaccataggtctccacatacttgaaagacatctcaatatttttctaattctatcatgagg |
224 |
Q |
| |
|
||||| || |||||||||||||| | ||| |||||||| ||||||||||||||||| |||||||| |
|
|
| T |
14643385 |
gattgctgtaaccataggtctccatgtgtttgggagacatcttaatatttttctaattctgtcatgagg |
14643453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 182; Significance: 2e-98; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 27414036 - 27413803
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||| ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| | |
|
|
| T |
27414036 |
tcatcagcaactgatggggtttgctgagatgctttcaaagcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctta |
27413937 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||| ||| |
|
|
| T |
27413936 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacatctcagtat |
27413837 |
T |
|
| Q |
204 |
ttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||| |
|
|
| T |
27413836 |
ttttctaattctatcatgagtagaatatgccttt |
27413803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 4 - 237
Target Start/End: Original strand, 26200778 - 26201011
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||| | |
|
|
| T |
26200778 |
tcatcagcaactgatggggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctta |
26200877 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| || |
|
|
| T |
26200878 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcagaat |
26200977 |
T |
|
| Q |
204 |
ttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| |
|
|
| T |
26200978 |
ttttctaattctatcatgagtggaatatgccttt |
26201011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 33941208 - 33940975
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||||||||||||||| | |||||||| || ||||||||||||||||||||||||||||||||||| | |
|
|
| T |
33941208 |
tcatcagcaactgatgaggtttgctgagatgctttcaaggcaagtgttcttaccttctttactggtttgtctccttgaagtacaacttcatgagctctta |
33941109 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| || |
|
|
| T |
33941108 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcagaat |
33941009 |
T |
|
| Q |
204 |
ttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| |
|
|
| T |
33941008 |
ttttctaattctatcatgagtggaatatgccttt |
33940975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 18363165 - 18362932
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| | |
|
|
| T |
18363165 |
tcatcagcaactgatggggtttgctgagatgcttttaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctta |
18363066 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||| || |
|
|
| T |
18363065 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacatctcagaat |
18362966 |
T |
|
| Q |
204 |
ttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| |
|
|
| T |
18362965 |
ttttctaattctatcatgagtggaatatgccttt |
18362932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 13 - 233
Target Start/End: Complemental strand, 20949734 - 20949514
Alignment:
| Q |
13 |
actgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
112 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||| || |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20949734 |
actgatgaggtttgctgagaggctttcaaggcaagtgactttaccttctttactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
20949635 |
T |
|
| Q |
113 |
tgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatatttttctaat |
212 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |
|
|
| T |
20949634 |
tgagatcttccaggttcatagatttcaaatccttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcaatatttttctgat |
20949535 |
T |
|
| Q |
213 |
tctatcatgaggagaatatgc |
233 |
Q |
| |
|
||| ||||||| |||||||| |
|
|
| T |
20949534 |
tctctcatgagtggaatatgc |
20949514 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 14 - 223
Target Start/End: Original strand, 23375368 - 23375569
Alignment:
| Q |
14 |
ctgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaat |
113 |
Q |
| |
|
|||||||| |||| |||||||||||||||| ||||| ||| ||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
23375368 |
ctgatgaagtttgttgagatgctttcaaggaaagtgattttacctttttcactggtttgtctttttgaagtacaacttcatgagctctcagtgaaccaat |
23375467 |
T |
|
| Q |
114 |
gagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatatttttctaatt |
213 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||| |
|
|
| T |
23375468 |
gagatcttcaaggttcatagattttaaatctttggcctgagtaattgca---tccataggtctccacatacttg-----catctcaatatttttctgatt |
23375559 |
T |
|
| Q |
214 |
ctatcatgag |
223 |
Q |
| |
|
|| ||||||| |
|
|
| T |
23375560 |
ctttcatgag |
23375569 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 67 - 231
Target Start/End: Original strand, 22456359 - 22456523
Alignment:
| Q |
67 |
ggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtga |
166 |
Q |
| |
|
||||||||| ||||||| | ||||||||||||||| |||| |||||||||||||| | || || |||||||||||||| ||||| ||| | || | |
|
|
| T |
22456359 |
ggtttgtcttcttgaagcaaaacttcatgagctcttagtgttccaatgagatcttctaaagccaaggaatttaaatctttggcttgagtgatttctgtaa |
22456458 |
T |
|
| Q |
167 |
ccataggtctccacatacttgaaagacatctcaatatttttctaattctatcatgaggagaatat |
231 |
Q |
| |
|
||||||||||||| ||| | | ||||||||| ||||||||||| ||||| ||||||||||||||| |
|
|
| T |
22456459 |
ccataggtctccatatattaggaagacatcttaatatttttctgattctgtcatgaggagaatat |
22456523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 56 - 231
Target Start/End: Complemental strand, 20037520 - 20037345
Alignment:
| Q |
56 |
ccttcttcaccggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagt |
155 |
Q |
| |
|
|||| ||||||||||| ||| |||| |||| ||||||||||||||| |||| |||||||||| ||| | || || |||| ||| ||||| ||||| |
|
|
| T |
20037520 |
cctttttcaccggtttatcttcttggagtagaacttcatgagctctaagtgttccaatgagattttctaaagccaaggaatttagatcgttggcttgagt |
20037421 |
T |
|
| Q |
156 |
aattgcagtgaccataggtctccacatacttgaaagacatctcaatatttttctaattctatcatgaggagaatat |
231 |
Q |
| |
|
|||| || ||||||||||||||| | ||| |||||||| ||||||||||| ||||| |||||||| |||||| |
|
|
| T |
20037420 |
gattgttgtaaccataggtctccacgtgtttgggagacatcttaatatttttctgattctgtcatgaggggaatat |
20037345 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 231
Target Start/End: Original strand, 24299175 - 24299270
Alignment:
| Q |
136 |
tttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatatttttctaattctatcatgaggagaatat |
231 |
Q |
| |
|
||||| |||||||| ||||| ||||| || |||||||||||||| || ||| |||||||| ||||||||||| ||||| |||||||| |||||| |
|
|
| T |
24299175 |
tttaagtctttggcttgagtgattgctgtaaccataggtctccatgtatttgggagacatcttaatatttttctgattctgtcatgaggggaatat |
24299270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0611 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: scaffold0611
Description:
Target: scaffold0611; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 209 - 1
Alignment:
| Q |
1 |
tcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctc |
100 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
209 |
tcatcatcagcaactgatgaactttgctgagatgctttcaaggaaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctc |
110 |
T |
|
| Q |
101 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaa |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
109 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctaagtaattgcagtgaccataggtctccaaatacttggaagacatctcaa |
10 |
T |
|
| Q |
201 |
tatttttct |
209 |
Q |
| |
|
||||||||| |
|
|
| T |
9 |
tatttttct |
1 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 181; Significance: 6e-98; HSPs: 5)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 45016244 - 45016012
Alignment:
| Q |
1 |
tcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctc |
100 |
Q |
| |
|
||||||||| |||||||||| ||| |||||||||||| |||||||||||||| |||||||| || |||||||||||||||||||||||||||||||||| |
|
|
| T |
45016244 |
tcatcatcagcaactgatgagcttgactgagatgcttttaaggcaagtgtttttaccttctttactggtttgtctccttgaagtacaacttcatgagctc |
45016145 |
T |
|
| Q |
101 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaa |
200 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
45016144 |
ttagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcag |
45016045 |
T |
|
| Q |
201 |
tatttttctaattctatcatgaggagaatatgc |
233 |
Q |
| |
|
||||||||||||||||||||||| ||||||||| |
|
|
| T |
45016044 |
tatttttctaattctatcatgagtagaatatgc |
45016012 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 4 - 237
Target Start/End: Original strand, 9512217 - 9512450
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||||||||||||||| | |||||||| || ||||||||||||||||||||||||||||||||||| | |
|
|
| T |
9512217 |
tcatcagcaactgatgaggtttgctgagatgctttcaaggcaagtgttcttaccttctttactggtttgtctccttgaagtacaacttcatgagctctta |
9512316 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| || |
|
|
| T |
9512317 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcagaat |
9512416 |
T |
|
| Q |
204 |
ttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| |
|
|
| T |
9512417 |
ttttctaattctatcatgagtggaatatgccttt |
9512450 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 18653106 - 18652873
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||||||||||||||| | |||||||| || ||||||||||||||||||||||||||||||||||| | |
|
|
| T |
18653106 |
tcatcagcaactgatgaggtttgctgagatgctttcaaggcaagtgttcttaccttctttactggtttgtctccttgaagtacaacttcatgagctctta |
18653007 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| || |
|
|
| T |
18653006 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcagaat |
18652907 |
T |
|
| Q |
204 |
ttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| |
|
|
| T |
18652906 |
ttttctaattctatcatgagtggaatatgccttt |
18652873 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 13 - 233
Target Start/End: Original strand, 27168448 - 27168668
Alignment:
| Q |
13 |
actgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
112 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||| || || ||||| || |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27168448 |
actgatgaggtttgctgagaggctttcaaggcaagtgactttactttctttactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
27168547 |
T |
|
| Q |
113 |
tgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatatttttctaat |
212 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |
|
|
| T |
27168548 |
tgagatcttccaggttcatagatttcaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcaatatttttctgat |
27168647 |
T |
|
| Q |
213 |
tctatcatgaggagaatatgc |
233 |
Q |
| |
|
||| ||||||| |||||||| |
|
|
| T |
27168648 |
tctctcatgagtggaatatgc |
27168668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 13 - 223
Target Start/End: Complemental strand, 22904018 - 22903808
Alignment:
| Q |
13 |
actgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
112 |
Q |
| |
|
|||||||| |||||||||| ||||| |||||||||| || |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22904018 |
actgatgaggtttgctgagaggcttttaaggcaagtgactttaccttcttcattggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
22903919 |
T |
|
| Q |
113 |
tgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatatttttctaat |
212 |
Q |
| |
|
|||||||||||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||| || |||||||||||||| || |
|
|
| T |
22903918 |
tgagatcttccaagttcatagatttcaaatctttggcctgagtaattgcagttaccataggtctccacatacttggaaggcaactcaatatttttctgat |
22903819 |
T |
|
| Q |
213 |
tctatcatgag |
223 |
Q |
| |
|
| | ||||||| |
|
|
| T |
22903818 |
tatctcatgag |
22903808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 178; Significance: 4e-96; HSPs: 9)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 31359449 - 31359216
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||| | |
|
|
| T |
31359449 |
tcatcagcaactgatggggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctta |
31359350 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| || |
|
|
| T |
31359349 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcagaat |
31359250 |
T |
|
| Q |
204 |
ttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| |
|
|
| T |
31359249 |
ttttctaattctatcatgagtggaatatgccttt |
31359216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 16899834 - 16899601
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| | |
|
|
| T |
16899834 |
tcatcagcaactgatggggtttgctgagatgcttttaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctta |
16899735 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||| || |
|
|
| T |
16899734 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacatctcagaat |
16899635 |
T |
|
| Q |
204 |
ttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| |
|
|
| T |
16899634 |
ttttctaattctatcatgagttgaatatgccttt |
16899601 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 18161953 - 18161720
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| | |
|
|
| T |
18161953 |
tcatcagcaactgatggggtttgctgagatgcttttaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctta |
18161854 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||| || |
|
|
| T |
18161853 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacatctcagaat |
18161754 |
T |
|
| Q |
204 |
ttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| |
|
|
| T |
18161753 |
ttttctaattctatcatgagtggaatatgccttt |
18161720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 13 - 233
Target Start/End: Complemental strand, 34767235 - 34767015
Alignment:
| Q |
13 |
actgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
112 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||| || |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34767235 |
actgatgaggtttgctgagaggctttcaaggcaagtgactttaccttctttactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
34767136 |
T |
|
| Q |
113 |
tgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatatttttctaat |
212 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |
|
|
| T |
34767135 |
tgagatcttccaggttcatagatttcaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcaatatttttctgat |
34767036 |
T |
|
| Q |
213 |
tctatcatgaggagaatatgc |
233 |
Q |
| |
|
||| ||||||| |||||||| |
|
|
| T |
34767035 |
tctctcatgagtggaatatgc |
34767015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 18704493 - 18704729
Alignment:
| Q |
1 |
tcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctc |
100 |
Q |
| |
|
||||||||| | ||| |||| |||||||||| |||||||||||||||| ||| ||||||||||| || ||||||||||||||||||||| ||||||||| |
|
|
| T |
18704493 |
tcatcatcagctacttatgaggtttgctgagaagctttcaaggcaagtgattttaccttcttcactgggttgtctccttgaagtacaactgcatgagctc |
18704592 |
T |
|
| Q |
101 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaa |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |
|
|
| T |
18704593 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttggaagacatcttag |
18704692 |
T |
|
| Q |
201 |
tatttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
|| ||||| ||||| ||||||| |||||| ||||| |
|
|
| T |
18704693 |
aatctttctgattctctcatgagtggaatattccttt |
18704729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 18710428 - 18710664
Alignment:
| Q |
1 |
tcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctc |
100 |
Q |
| |
|
||||||||| | ||| |||| |||||||||| |||||||||||||||| ||| ||||||||||| || ||||||||||||||||||||| ||||||||| |
|
|
| T |
18710428 |
tcatcatcagctacttatgaggtttgctgagaagctttcaaggcaagtgattttaccttcttcactgggttgtctccttgaagtacaactgcatgagctc |
18710527 |
T |
|
| Q |
101 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaa |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | |
|
|
| T |
18710528 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttggaagacatcttag |
18710627 |
T |
|
| Q |
201 |
tatttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
|| ||||| ||||| ||||||| |||||| ||||| |
|
|
| T |
18710628 |
aatctttctgattctctcatgagtggaatattccttt |
18710664 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 197
Target Start/End: Complemental strand, 29561317 - 29561121
Alignment:
| Q |
1 |
tcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctc |
100 |
Q |
| |
|
||||||||| | |||||||| ||||||||||||||||||| ||||||||||| || |||||||| ||||| |||||||||||||| ||||||||||||| |
|
|
| T |
29561317 |
tcatcatcagctactgatgaggtttgctgagatgctttcaaagcaagtgtttttacattcttcactggtttatctccttgaagtacgacttcatgagctc |
29561218 |
T |
|
| Q |
101 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatct |
197 |
Q |
| |
|
| ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| ||| |||| ||||||||||||||| |
|
|
| T |
29561217 |
ttagtgaaccaatgagatctttcaggttcatagattttaaatctttggcctaagtaattgttgtgaccatatgtcctcacacacttgaaagacatct |
29561121 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 25895891 - 25895796
Alignment:
| Q |
136 |
tttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatatttttctaattctatcatgaggagaatat |
231 |
Q |
| |
|
||||| |||||||| ||||| ||||| || |||||||||||||| || ||| |||||||| ||||||||||| ||||| |||||||| |||||| |
|
|
| T |
25895891 |
tttaagtctttggcttgagtgattgctgtaaccataggtctccatgtatttgggagacatcttaatatttttctgattctgtcatgaggggaatat |
25895796 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 29542147 - 29542102
Alignment:
| Q |
192 |
acatctcaatatttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
|||||| ||||||||||| ||||||||||||| |||||||||||| |
|
|
| T |
29542147 |
acatcttaatatttttctgattctatcatgagtggaatatgccttt |
29542102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 178; Significance: 4e-96; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 9539023 - 9538790
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||| | |
|
|
| T |
9539023 |
tcatcagcaactgatggggtttgctgagatgctttcaaggcaagtgttcttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctta |
9538924 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| || |
|
|
| T |
9538923 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcagaat |
9538824 |
T |
|
| Q |
204 |
ttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| |
|
|
| T |
9538823 |
ttttctaattctatcatgagtggaatatgccttt |
9538790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 4 - 233
Target Start/End: Complemental strand, 6424195 - 6423966
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| | |
|
|
| T |
6424195 |
tcatcagcaactgatggggtttgctgagatgctttcaaggcaagtgtttttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctta |
6424096 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatat |
203 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| |||||| |||| ||| |
|
|
| T |
6424095 |
gtgaaccaatgagatcttccaggtttatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacacctcagtat |
6423996 |
T |
|
| Q |
204 |
ttttctaattctatcatgaggagaatatgc |
233 |
Q |
| |
|
|||||||||||||||||||| ||||||||| |
|
|
| T |
6423995 |
ttttctaattctatcatgagtagaatatgc |
6423966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 8974734 - 8974501
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| ||||||||| |||||||||||||||| ||||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||| | |
|
|
| T |
8974734 |
tcatcagcaactgatggggtttgctgagatgcttttaaggcaagtgtctttaccttcttcactggtttgtctccttgaagtacaacttcatgagctctta |
8974635 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatat |
203 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||||| || |
|
|
| T |
8974634 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacatctcagaat |
8974535 |
T |
|
| Q |
204 |
ttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| |
|
|
| T |
8974534 |
ttttctaattctatcatgagtggaatatgccttt |
8974501 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 77 - 237
Target Start/End: Complemental strand, 12387802 - 12387642
Alignment:
| Q |
77 |
cttgaagtacaacttcatgagctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtct |
176 |
Q |
| |
|
||||||||||||||||||||||| |||||||| ||||||||||||||| ||||||| ||| ||||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
12387802 |
cttgaagtacaacttcatgagctatcagtgaatcaatgagatcttccaagttcatatattgtaaatatttagcctgagtaattgcagtgaccataggtct |
12387703 |
T |
|
| Q |
177 |
ccacatacttgaaagacatctcaatatttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
| |||||||| ||| ||||||||||||||||| | ||| |||| || |||||||||||| |
|
|
| T |
12387702 |
tcgcatacttggaaggcatctcaatatttttctgactctctcataagtggaatatgccttt |
12387642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0058 (Bit Score: 174; Significance: 9e-94; HSPs: 1)
Name: scaffold0058
Description:
Target: scaffold0058; HSP #1
Raw Score: 174; E-Value: 9e-94
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 52982 - 53216
Alignment:
| Q |
1 |
tcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctc |
100 |
Q |
| |
|
||||||||| | |||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |
|
|
| T |
52982 |
tcatcatcagctactgatgagctttgatgagatgctttcaaggcaagtgttttcaccttcttcactagtttgtctccttgaagtataacttcatgagctc |
53081 |
T |
|
| Q |
101 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaa |
200 |
Q |
| |
|
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
53082 |
tcagtgatccaatgagatcttcgaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccatatacttggaagacatctc-- |
53179 |
T |
|
| Q |
201 |
tatttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
||||||||| ||||||||||||| ||||||||||||| |
|
|
| T |
53180 |
tatttttctgattctatcatgagtagaatatgccttt |
53216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0014 (Bit Score: 169; Significance: 9e-91; HSPs: 1)
Name: scaffold0014
Description:
Target: scaffold0014; HSP #1
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 148599 - 148363
Alignment:
| Q |
1 |
tcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctc |
100 |
Q |
| |
|
||||||||| | |||||||| |||||||||||||||||||||| ||||||||| || |||||||| ||||||||||||||||||||||| |||||||||| |
|
|
| T |
148599 |
tcatcatcagctactgatgagctttgctgagatgctttcaaggtaagtgtttttactttcttcactggtttgtctccttgaagtacaacgtcatgagctc |
148500 |
T |
|
| Q |
101 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaa |
200 |
Q |
| |
|
||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||||||||| || |
|
|
| T |
148499 |
tcagtgaaccaatgagatcctctaggttcatagattttaaatctttggcctgagtgattgcagtgaccataggtctccacacacttggaagacatcttaa |
148400 |
T |
|
| Q |
201 |
tatttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
||||||||| ||||||||||||| | ||||||||||| |
|
|
| T |
148399 |
tatttttctgattctatcatgagtataatatgccttt |
148363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 166; Significance: 6e-89; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 4 - 237
Target Start/End: Complemental strand, 16156771 - 16156538
Alignment:
| Q |
4 |
tcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctca |
103 |
Q |
| |
|
|||||| ||||||||| ||||||||||||||||||| ||| ||||||| ||||||||||| |||||||||| |||||||||||||||||||||||| | |
|
|
| T |
16156771 |
tcatcagcaactgatggggtttgctgagatgctttcaaagcaggtgtttttaccttcttcactggtttgtctcgttgaagtacaacttcatgagctctta |
16156672 |
T |
|
| Q |
104 |
gtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatat |
203 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||| ||||| ||||||||||| ||| |
|
|
| T |
16156671 |
gtgaaccaatgagatcttccaggttcatagattttaaatcttttgcctgagtgattgcagtgaccataggtctccacacacttggaagacatctcagtat |
16156572 |
T |
|
| Q |
204 |
ttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
|||||||||| ||||||||| ||||||||||||| |
|
|
| T |
16156571 |
ttttctaattttatcatgagtagaatatgccttt |
16156538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 13 - 233
Target Start/End: Original strand, 1987651 - 1987871
Alignment:
| Q |
13 |
actgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
112 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||| || |||||||| || ||||||||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
1987651 |
actgatgagatttgctgagaggctttcaaggcaagtgactttaccttctttactggtttgtctccttgaagtacaacttcatgagctcttagtgaaccaa |
1987750 |
T |
|
| Q |
113 |
tgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatatttttctaat |
212 |
Q |
| |
|
||||||||||||| ||||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||| ||| ||||||||||||||||| || |
|
|
| T |
1987751 |
tgagatcttccagattcatagatttcaaatctttggcctgagtgatttcagtgaccataggtctccacatacttggaagtcatctcaatatttttctgat |
1987850 |
T |
|
| Q |
213 |
tctatcatgaggagaatatgc |
233 |
Q |
| |
|
||| ||||||| |||||||| |
|
|
| T |
1987851 |
tctctcatgagtggaatatgc |
1987871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 28 - 223
Target Start/End: Complemental strand, 22960190 - 22959996
Alignment:
| Q |
28 |
tgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaatgagatcttccaggt |
127 |
Q |
| |
|
||||| ||||| |||| ||||| ||| |||||| |||| ||||| ||||||| ||||| ||||||||||||||| ||||||||| |||| ||||||| |
|
|
| T |
22960190 |
tgagaagcttttaaggtaagtgattttaccttcctcactggtttatctccttaaagtataacttcatgagctcttagtgaacca-tgagttcttccaaag |
22960092 |
T |
|
| Q |
128 |
tcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatatttttctaattctatcatgag |
223 |
Q |
| |
|
||| ||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||| | ||| || || ||||||||||||| |
|
|
| T |
22960091 |
tcaaagagtttaaatctttggcttgagtaattgcagtgaccataggtctccatatacttggaagacatcttagtatcttcctgattctatcatgag |
22959996 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 224
Target Start/End: Original strand, 14280557 - 14280725
Alignment:
| Q |
56 |
ccttcttcaccggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagt |
155 |
Q |
| |
|
|||| ||||||||||| ||| |||| |||| || |||||||||||| || | ||||||||||| || | || || |||| ||||||||| ||||| |
|
|
| T |
14280557 |
cctttttcaccggtttatcttcttggagtagaatttcatgagctctaagcgttccaatgagatcctctaaagccaaggaatttagatctttggcttgagt |
14280656 |
T |
|
| Q |
156 |
aattgcagtgaccataggtctccacatacttgaaagacatctcaatatttttctaattctatcatgagg |
224 |
Q |
| |
|
||||| || ||||| |||||||| | ||| |||||||| || |||||||||||||| |||||||| |
|
|
| T |
14280657 |
gattgctgtaaccatgggtctccatgtgtttgggagacatcttaaaatttttctaattctgtcatgagg |
14280725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0254 (Bit Score: 165; Significance: 2e-88; HSPs: 1)
Name: scaffold0254
Description:
Target: scaffold0254; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 13 - 237
Target Start/End: Original strand, 6030 - 6254
Alignment:
| Q |
13 |
actgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
112 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||| || |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
6030 |
actgatgaggtttgctgagaggctttcaaggcaagtgactttaccttctttactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
6129 |
T |
|
| Q |
113 |
tgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatatttttctaat |
212 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |
|
|
| T |
6130 |
tgagatcttccaggttcatagatttcaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcaatatttttctgat |
6229 |
T |
|
| Q |
213 |
tctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
||| ||||||| |||||||||||| |
|
|
| T |
6230 |
tctctcatgagtggaatatgccttt |
6254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0313 (Bit Score: 161; Significance: 5e-86; HSPs: 2)
Name: scaffold0313
Description:
Target: scaffold0313; HSP #1
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 13 - 233
Target Start/End: Complemental strand, 7648 - 7428
Alignment:
| Q |
13 |
actgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
112 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||| || |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7648 |
actgatgaggtttgctgagaggctttcaaggcaagtgactttaccttctttactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
7549 |
T |
|
| Q |
113 |
tgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatatttttctaat |
212 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |
|
|
| T |
7548 |
tgagatcttccaggttcatagatttcaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcaatatttttctgat |
7449 |
T |
|
| Q |
213 |
tctatcatgaggagaatatgc |
233 |
Q |
| |
|
||| ||||||| |||||||| |
|
|
| T |
7448 |
tctctcatgagtggaatatgc |
7428 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0313; HSP #2
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 13 - 233
Target Start/End: Complemental strand, 11430 - 11210
Alignment:
| Q |
13 |
actgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
112 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||| || |||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
11430 |
actgatgaggtttgctgagaggctttcaaggcaagtgactttaccttctttactggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaa |
11331 |
T |
|
| Q |
113 |
tgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatatttttctaat |
212 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||| || |
|
|
| T |
11330 |
tgagatcttccaggttcatagatttcaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcaatatttttctgat |
11231 |
T |
|
| Q |
213 |
tctatcatgaggagaatatgc |
233 |
Q |
| |
|
||| ||||||| |||||||| |
|
|
| T |
11230 |
tctctcatgagtggaatatgc |
11210 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 124; Significance: 6e-64; HSPs: 1)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 14 - 223
Target Start/End: Complemental strand, 17097 - 16896
Alignment:
| Q |
14 |
ctgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaat |
113 |
Q |
| |
|
|||||||| |||| |||||||||||||||| ||||| ||| ||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
17097 |
ctgatgaagtttgttgagatgctttcaaggaaagtgattttacctttttcactggtttgtctttttgaagtacaacttcatgagctctcagtgaaccaat |
16998 |
T |
|
| Q |
114 |
gagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatatttttctaatt |
213 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||| |
|
|
| T |
16997 |
gagatcttcaaggttcatagattttaaatctttggcctgagtaattgca---tccataggtctccacatacttg-----catctcaatatttttctgatt |
16906 |
T |
|
| Q |
214 |
ctatcatgag |
223 |
Q |
| |
|
|| ||||||| |
|
|
| T |
16905 |
ctttcatgag |
16896 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0141 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0141
Description:
Target: scaffold0141; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 27836 - 27670
Alignment:
| Q |
1 |
tcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctc |
100 |
Q |
| |
|
||||||||| | |||||||| |||||||||| |||||||||||||||| ||| ||||||||||| ||||||||||||||||||| |||||||||||||| |
|
|
| T |
27836 |
tcatcatcagctactgatgaggtttgctgagaagctttcaaggcaagtgattttaccttcttcactggtttgtctccttgaagtataacttcatgagctc |
27737 |
T |
|
| Q |
101 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgac |
167 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
27736 |
tcaatgaaccaatgagatcttccaggttcatagattttaaatctttgatctgagtaattgtagtgac |
27670 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0141; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 237
Target Start/End: Complemental strand, 20506 - 20430
Alignment:
| Q |
161 |
cagtgaccataggtctccacatacttgaaagacatctcaatatttttctaattctatcatgaggagaatatgccttt |
237 |
Q |
| |
|
|||||||||||||||||||||| |||| ||||||||| | || ||||| ||||| ||||||| |||||||||||| |
|
|
| T |
20506 |
cagtgaccataggtctccacattcttggaagacatcttagaatctttctgattctctcatgagtggaatatgccttt |
20430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0049 (Bit Score: 115; Significance: 2e-58; HSPs: 1)
Name: scaffold0049
Description:
Target: scaffold0049; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 86976 - 87142
Alignment:
| Q |
1 |
tcatcatcaacaactgatgaactttgctgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctc |
100 |
Q |
| |
|
||||||||| | |||||||| |||||||||| |||||||||||||||| ||| ||||||||||| ||||||||||||||||||| |||||||||||||| |
|
|
| T |
86976 |
tcatcatcagctactgatgaggtttgctgagaagctttcaaggcaagtgattttaccttcttcactggtttgtctccttgaagtataacttcatgagctc |
87075 |
T |
|
| Q |
101 |
tcagtgaaccaatgagatcttccaggttcatagattttaaatctttggcctgagtaattgcagtgac |
167 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |
|
|
| T |
87076 |
tcaatgaaccaatgagatcttccaggttcatagattttaaatctttgatctgagtaattgtagtgac |
87142 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0015 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0015
Description:
Target: scaffold0015; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 28 - 223
Target Start/End: Original strand, 189005 - 189199
Alignment:
| Q |
28 |
tgagatgctttcaaggcaagtgttttcaccttcttcaccggtttgtctccttgaagtacaacttcatgagctctcagtgaaccaatgagatcttccaggt |
127 |
Q |
| |
|
||||| ||||| |||||||||| ||| ||||| ||| ||||| ||||||| ||||| ||||||||||||||| ||||||||| |||| |||||| |
|
|
| T |
189005 |
tgagaagcttttaaggcaagtgattttacctttctcattggtttatctccttaaagtataacttcatgagctcttagtgaacca-tgagtacttccaaag |
189103 |
T |
|
| Q |
128 |
tcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatatttttctaattctatcatgag |
223 |
Q |
| |
|
||| ||| |||||||||||||| ||||||||||||||||||||||| ||||| |||||| ||||||||| | ||| || |||||||||||||||| |
|
|
| T |
189104 |
tcaaagagtttaaatctttggcttgagtaattgcagtgaccataggcctccatgtacttggaagacatcttagtatcttcctaattctatcatgag |
189199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0529 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0529
Description:
Target: scaffold0529; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 127 - 233
Target Start/End: Complemental strand, 290 - 184
Alignment:
| Q |
127 |
ttcatagattttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatatttttctaattctatcatgaggag |
226 |
Q |
| |
|
||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||||| ||||| ||||||| | |
|
|
| T |
290 |
ttcatagatttcaaatctttggcctgagtgattgcagtgaccataggtctccacatacttggaagacatctcattatttttcttattctttcatgagtgg |
191 |
T |
|
| Q |
227 |
aatatgc |
233 |
Q |
| |
|
||||||| |
|
|
| T |
190 |
aatatgc |
184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0010 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0010
Description:
Target: scaffold0010; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 231
Target Start/End: Complemental strand, 258253 - 258158
Alignment:
| Q |
136 |
tttaaatctttggcctgagtaattgcagtgaccataggtctccacatacttgaaagacatctcaatatttttctaattctatcatgaggagaatat |
231 |
Q |
| |
|
||||| |||||||| ||||| ||||| || |||||||||||||| | ||| |||||||| ||||||||||| ||||| |||||||| |||||| |
|
|
| T |
258253 |
tttaagtctttggcttgagtgattgctgtaaccataggtctccatgtttttgggagacatcttaatatttttctgattctgtcatgaggggaatat |
258158 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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