View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5208_low_12 (Length: 326)
Name: NF5208_low_12
Description: NF5208
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5208_low_12 |
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Alignment Details
Target: chr5 (Bit Score: 269; Significance: 1e-150; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 1 - 305
Target Start/End: Original strand, 16715474 - 16715778
Alignment:
| Q |
1 |
tttgtttaacctctactcttttggcatgatttgttgaaaattatacttcagggaagctatttgagtttaatcacaatacatatatatttatgacaatctt |
100 |
Q |
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| T |
16715474 |
tttgtttaaactctactcttttggcatgatttgttgaaaattatacttcagggaagctatttgagtttaataacaatacatatatatttatgacaatctt |
16715573 |
T |
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| Q |
101 |
agggtttaaagattatacctaaatctaaggttggaaaaacctctaagtttaaagaacacttacaaagaaatttatattttacttcccttcaaagacaccg |
200 |
Q |
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| T |
16715574 |
ggggtttaaagatgatacctaaatctaaggtgggaaaaacctctaagtttaaagaacactgacaaataaatttatattttacttcccttcatagacaccg |
16715673 |
T |
|
| Q |
201 |
gcaaactcgaattcaaaatctacgaatgttatacaatgacatgatattttatgcaaattttataatcactctctaagcgttagacatttcccagaagaag |
300 |
Q |
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| T |
16715674 |
gcaaactcgaattcaaaatctatgaatgttatacaatgacatgatattttatgcaaattttataatcactctctaagcgttagacatttcccagaagaag |
16715773 |
T |
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| Q |
301 |
tgaat |
305 |
Q |
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||||| |
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| T |
16715774 |
tgaat |
16715778 |
T |
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