View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5212-Insertion-13 (Length: 602)
Name: NF5212-Insertion-13
Description: NF5212
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5212-Insertion-13 |
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Alignment Details
Target: chr2 (Bit Score: 395; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 395; E-Value: 0
Query Start/End: Original strand, 8 - 553
Target Start/End: Original strand, 45268902 - 45269430
Alignment:
| Q |
8 |
ctaaggttggttaatgaatgaattgatatatagatatttgtc--------tgtctgtcaattacagctaaggtaatggaattgtttgacatgagaagcac |
99 |
Q |
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| T |
45268902 |
ctaaggttggttaatgaatgaattgatatatagatatttgtctgtctgtctgtctgtcaattacagctaaggtaatggaattgtttgacatgagaagcac |
45269001 |
T |
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| Q |
100 |
caaggatgttgagcttcattgttttaatgaagatggtgtcaaaaggacacacaacgttttgtagaaagcaactagaagggttgaaaatcttcattggtgc |
199 |
Q |
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| T |
45269002 |
caaggatgttgagcttcattgttttaatgaagatggtgtcaaaaggacacacaacgttttgtagaaagcaactagaagggttgaaaatcttcattggtgc |
45269101 |
T |
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| Q |
200 |
gttgcatgtaaaaggaaggaagaagggtttggttttgggtttgaggtgaagaaggtatgaaaggaatgtgttgagatttatatggtttgattaaggggtt |
299 |
Q |
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| T |
45269102 |
ggtgcatgtaaaaggcaggaagaagggtttggttttgggtttgaggtgaagaagggttgaaaggaatgggttgagatttatatggtttgattatggagct |
45269201 |
T |
|
| Q |
300 |
gagcaaatttaggggtgtgaaaaataaggataaaaatagggtttaggaaaaaagaggaggggacacacggttttatgatggctatgctatgggctgtggc |
399 |
Q |
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| T |
45269202 |
gagcaaatttaggggtgtgaaaaataaggataaaaatagggttta---------------ggacacacggttttatgatg-----gctatgggctgtggc |
45269281 |
T |
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| Q |
400 |
tggctatgaccaagcatcggattggatttgttttagaaaaagcagaagagataaggctaaaatatctgtgaaattactaaaataagccaaatttggtcta |
499 |
Q |
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| T |
45269282 |
tggctatgaccaagc-----attggatttgtttgagaaaaagcagaagagataaggctaaaatatctgtgaaattactaaaataagccaaatttggtcta |
45269376 |
T |
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| Q |
500 |
tttttccgcggaacaagtggagttatgtgggtccttaacctcttttttattcaa |
553 |
Q |
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| T |
45269377 |
tttttccgctgaacaagtggagttatgtgggtccttaacctcttttttattcaa |
45269430 |
T |
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