View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5212-Insertion-21 (Length: 178)
Name: NF5212-Insertion-21
Description: NF5212
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5212-Insertion-21 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 172; Significance: 1e-92; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 172; E-Value: 1e-92
Query Start/End: Original strand, 7 - 178
Target Start/End: Complemental strand, 39522081 - 39521910
Alignment:
| Q |
7 |
actaagtccgtaacatgtttgatcattttagattacaatacaacaaacattcctgtttcacactccaaagaatcttctcactttttacattacaattcac |
106 |
Q |
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| T |
39522081 |
actaagtccgtaacatgtttgatcattttagattacaatacaacaaacattcctgtttcacactccaaagaatcttctcactttttacattacaattcac |
39521982 |
T |
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| Q |
107 |
acttaacttcagtggaagtctccaaaatctcctcatcagattcagaaagtgcagagtacaataatgtccttt |
178 |
Q |
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| T |
39521981 |
acttaacttcagtggaagtctccaaaatctcctcatcagattcagaaagtgcagagtacaataatgtccttt |
39521910 |
T |
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