View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF5212-Insertion-4 (Length: 1011)
Name: NF5212-Insertion-4
Description: NF5212
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5212-Insertion-4 |
 | |
|
| [»] chr3 (4 HSPs) |
| |
|
Alignment Details
Target: chr3 (Bit Score: 827; Significance: 0; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 827; E-Value: 0
Query Start/End: Original strand, 80 - 1011
Target Start/End: Complemental strand, 10320512 - 10319564
Alignment:
| Q |
80 |
tcaaatgttgaatcaaattaattaagagtgaacgaagccatgaaatt-aatttacagtaatgtaaaaacactatacatcatttcagaatacttttgaact |
178 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
10320512 |
tcaaatgttgaatcaaattaattaagagtgaacgaaaccatgaaatttaatttacagtaatgtaaaaacactatgcaacatttcagaatacttttgaact |
10320413 |
T |
|
| Q |
179 |
ttcatttccaaaacaaagcagaaccatacaagtttgtttgctacatatcagacataatcctttgtgtcacaaactccagaacacttattaaaatttcatg |
278 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10320412 |
ttcatttccaaaacaaagcagaaccatacaagtttttttgctacatatcagacataatcctttgtgtcacaaactccagaacacttattaaaatttcatg |
10320313 |
T |
|
| Q |
279 |
atacgtaaaactgaggaaaaaccactgtttgagattctaccgattgctctgagcccgagaactctcgccctcaagggtttgagggttc------------ |
366 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10320312 |
atacgtaaaactgaggaaaaaccactgtttgagattctaccgattgctctgagcccgagaactctcgccctcaagggtttgagggttcagagccagagga |
10320213 |
T |
|
| Q |
367 |
---cgagggccctgagagctagatgcatgtgatgaacctgattcaaactggataatatccttcagactccgatgcctcattgaatccagccttgaagtgg |
463 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10320212 |
gtccgagggccctgagagctagatgcatgtgatgaacctgattcaaactggataatatccttcagactccgatgcctcattgaatccagccttgaagtgg |
10320113 |
T |
|
| Q |
464 |
ttaatccagatcgtgcaaaatccgattgtacaggcgtgtcagatgagcctctgtaggacaaattaagtacaggctgcctcggaaacgacgttttgtccaa |
563 |
Q |
| |
|
|||||||| || |||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10320112 |
ttaatccaaattgtgcaaaatctgattgtacaggcctgtcagatgagcctgtgtaggacaaattaagtacaggctgcctcggaaacgacgttttgtccaa |
10320013 |
T |
|
| Q |
564 |
gaacaccacaatcacacttatatcatcatgaaaagacctccggctcacattgttgcgtcccgtagcagcggcctgaatcttcctataggtaaccttcctt |
663 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10320012 |
gaacaccacaatcacacttatatcatcatgaaaagacctccggctcacattgttgcgtcccgtagcagcggcctgaatcttcctataggtaaccttcctt |
10319913 |
T |
|
| Q |
664 |
cttttagcagctaccgctagagcggtactcagaagccttttcgcaattccctgcaaaatccaccacagaataattaaattaaaagcctgcaaatataact |
763 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10319912 |
cttttagcagctaccgctagagcggtactcagaagccttttcgcaattccctgcaaaatccaccacagaataattaaattaaaagcctgcaaatataact |
10319813 |
T |
|
| Q |
764 |
gtaaagacccaaattgtcgtcaatcaaaaaacacgaagacttattttcattttctaaaggccaaataagtcttcgtgtttcttctcaatatgaatggaaa |
863 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
10319812 |
gtaaagactcaaattgtcgtcaatcaaaaaacacgaagacttattttcattttctaaaggctaaataagtcttcgtgtttcttctcaatgtgaatggaaa |
10319713 |
T |
|
| Q |
864 |
aatcaagaaaagaacaagttatagatatatacatacatttctaggattcttttgaacaatttcagcagcttttttatttga-gagaaatcccaaagtcca |
962 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
10319712 |
aatcaagaaaagaacaagttatagatatatacatacatttctaggattcttttgaacaatttcagcagcttttttatttgacaagaaatcccaaagtcca |
10319613 |
T |
|
| Q |
963 |
tcagaagcaaatataataaacttatcattatctgttaaaactctagtat |
1011 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
10319612 |
tcagaagcaaatataataaactgatcattatctgttaaaactctagtat |
10319564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 815; E-Value: 0
Query Start/End: Original strand, 80 - 1011
Target Start/End: Complemental strand, 10337628 - 10336680
Alignment:
| Q |
80 |
tcaaatgttgaatcaaattaattaagagtgaacgaagccatgaaatt-aatttacagtaatgtaaaaacactatacatcatttcagaatacttttgaact |
178 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
10337628 |
tcaaatgttgaatcaaattaattaagagtgaacgaaaccatgaaatttaatttagagtaatgtaaaaacactatgcaacatttcagaatacttttgaact |
10337529 |
T |
|
| Q |
179 |
ttcatttccaaaacaaagcagaaccatacaagtttgtttgctacatatcagacataatcctttgtgtcacaaactccagaacacttattaaaatttcatg |
278 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10337528 |
ttcatttccaaaacaaagcagaaccatacaagtttttttgctacatatcagacataatcctttgtgtcacaaactccagaacacttattaaaatttcatg |
10337429 |
T |
|
| Q |
279 |
atacgtaaaactgaggaaaaaccactgtttgagattctaccgattgctctgagcccgagaactctcgccctcaagggtttgagggttc------------ |
366 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10337428 |
atacgtaaaactgaggaaaaaccactgtttgagattctaccgattgctctgagcccgagaactctcgccctcaagggtttgagggttcagagccagagga |
10337329 |
T |
|
| Q |
367 |
---cgagggccctgagagctagatgcatgtgatgaacctgattcaaactggataatatccttcagactccgatgcctcattgaatccagccttgaagtgg |
463 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10337328 |
gtccgagggccttgagagctagatgcatgtgatgaacctgattcaaactggataatatccttcagactccgatgcctcattgaatccagccttgaagtgg |
10337229 |
T |
|
| Q |
464 |
ttaatccagatcgtgcaaaatccgattgtacaggcgtgtcagatgagcctctgtaggacaaattaagtacaggctgcctcggaaacgacgttttgtccaa |
563 |
Q |
| |
|
|||||||| || |||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10337228 |
ttaatccaaattgtgcaaaatctgattgtacaggcctgtcagatgagcctgtgtaggacaaattaagtacaggctgcctcggaaacgacgttttgtccaa |
10337129 |
T |
|
| Q |
564 |
gaacaccacaatcacacttatatcatcatgaaaagacctccggctcacattgttgcgtcccgtagcagcggcctgaatcttcctataggtaaccttcctt |
663 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10337128 |
gaacaccacaatcacacttatatcatcatgaaaagacctccggctcacattgttgcgtcccgtagcagcggcctgaatcttcctataggtaaccttcctt |
10337029 |
T |
|
| Q |
664 |
cttttagcagctaccgctagagcggtactcagaagccttttcgcaattccctgcaaaatccaccacagaataattaaattaaaagcctgcaaatataact |
763 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10337028 |
cttttagcagctaccgctagagcggtactcagaagccttttcgcaattccctgcaaaatccaccacagaataattaaattaaaagcctgcaaatataact |
10336929 |
T |
|
| Q |
764 |
gtaaagacccaaattgtcgtcaatcaaaaaacacgaagacttattttcattttctaaaggccaaataagtcttcgtgtttcttctcaatatgaatggaaa |
863 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
10336928 |
gtaaagactcaaattgtcgtcaatcaaaaaacacgaagacttattttcattttctaaaggctaaataagtcttcgtgtttcttctcaatgtgaatggaaa |
10336829 |
T |
|
| Q |
864 |
aatcaagaaaagaacaagttatagatatatacatacatttctaggattcttttgaacaatttcagcagcttttttatttga-gagaaatcccaaagtcca |
962 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
10336828 |
aatcaagaaaagaacaagttatagatatatacatacatttctaggattctttcgaacaatttcagcagcttttttatttgacaagaaatcccaaagtcca |
10336729 |
T |
|
| Q |
963 |
tcagaagcaaatataataaacttatcattatctgttaaaactctagtat |
1011 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
10336728 |
tcagaagcaaatataataaactgatcattatctgttaaaactctagtat |
10336680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 807; E-Value: 0
Query Start/End: Original strand, 80 - 1011
Target Start/End: Complemental strand, 10300080 - 10299132
Alignment:
| Q |
80 |
tcaaatgttgaatcaaattaattaagagtgaacgaagccatgaaatt-aatttacagtaatgtaaaaacactatacatcatttcagaatacttttgaact |
178 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||| || |||||||||||||||||||||| |
|
|
| T |
10300080 |
tcaaatgttgaatcaaattaattaagagtgaacgaaaccatgaaatttaatttagagtaatgtaaaaacactatgcaacatttcagaatacttttgaact |
10299981 |
T |
|
| Q |
179 |
ttcatttccaaaacaaagcagaaccatacaagtttgtttgctacatatcagacataatcctttgtgtcacaaactccagaacacttattaaaatttcatg |
278 |
Q |
| |
|
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10299980 |
ttcatttccaaaacaaagcagaaccatacaagcttttttgctacatatcagacataatcctttgtgtcacaaactccagaacacttattaaaatttcatg |
10299881 |
T |
|
| Q |
279 |
atacgtaaaactgaggaaaaaccactgtttgagattctaccgattgctctgagcccgagaactctcgccctcaagggtttgagggttc------------ |
366 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10299880 |
atacgtaaaactgaggaaaaaccactgtttgagattctaccgattgctctgagcccgagaactctcgccctcaagggtttgagggttcagagccagagga |
10299781 |
T |
|
| Q |
367 |
---cgagggccctgagagctagatgcatgtgatgaacctgattcaaactggataatatccttcagactccgatgcctcattgaatccagccttgaagtgg |
463 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||| |
|
|
| T |
10299780 |
gtccgagggccctgagagctagatgcatgtgatgaacctgattcaaactggataatatccttcagactccgatgcctcaatgactgcagccttgaagtgg |
10299681 |
T |
|
| Q |
464 |
ttaatccagatcgtgcaaaatccgattgtacaggcgtgtcagatgagcctctgtaggacaaattaagtacaggctgcctcggaaacgacgttttgtccaa |
563 |
Q |
| |
|
|||||||| || |||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10299680 |
ttaatccaaattgtgcaaaatctgattgtacaggcatgtcagatgagcctgtgtaggacaaattaagtacaggctgcctcggaaacgacgttttgtccaa |
10299581 |
T |
|
| Q |
564 |
gaacaccacaatcacacttatatcatcatgaaaagacctccggctcacattgttgcgtcccgtagcagcggcctgaatcttcctataggtaaccttcctt |
663 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10299580 |
gaacaccacaatcacacttatatcatcatgaaaagacctccggctcacattgttgcgtcccgtagcagcggcctgaatcttcctataggtaaccttcctt |
10299481 |
T |
|
| Q |
664 |
cttttagcagctaccgctagagcggtactcagaagccttttcgcaattccctgcaaaatccaccacagaataattaaattaaaagcctgcaaatataact |
763 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10299480 |
cttttagcagctaccgctagagcggtactcagaagcctttttgcaattccctgcaaaatccaccacagaataattaaattaaaagcctgcaaatataact |
10299381 |
T |
|
| Q |
764 |
gtaaagacccaaattgtcgtcaatcaaaaaacacgaagacttattttcattttctaaaggccaaataagtcttcgtgtttcttctcaatatgaatggaaa |
863 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
10299380 |
gtaaagactcaaattgtcgtcaatcaaaaaacacgaagacttattttcattttctaaaggctaaataagtcttcgtgtttcttctcaatgtgaatggaaa |
10299281 |
T |
|
| Q |
864 |
aatcaagaaaagaacaagttatagatatatacatacatttctaggattcttttgaacaatttcagcagcttttttatttga-gagaaatcccaaagtcca |
962 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
10299280 |
aatcaagaaaagaacaagttatagatatatacatacatttctaggattcttttgaacaatttcagcagcttttttatttgacaagaaatcccaaagtcca |
10299181 |
T |
|
| Q |
963 |
tcagaagcaaatataataaacttatcattatctgttaaaactctagtat |
1011 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10299180 |
tcagaagcaaatataataaacttatcattatctgttaaaactctagtat |
10299132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 887 - 1002
Target Start/End: Complemental strand, 10338557 - 10338441
Alignment:
| Q |
887 |
gatatatacatacatttctaggattcttttgaacaatttcagcagcttttttatttga-gagaaatcccaaagtccatcagaagcaaatataataaactt |
985 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||||||| | ||| | |||||| |||| |||||||||||| |||| ||||||||| |||||| |
|
|
| T |
10338557 |
gatatatacatacatttcttggattcttttgaacaatttcaactgctagctcatttgacaagaactcccaaagtccaacagaggcaaatatatgaaactt |
10338458 |
T |
|
| Q |
986 |
atcattatctgttaaaa |
1002 |
Q |
| |
|
|| | | |||||||||| |
|
|
| T |
10338457 |
attactctctgttaaaa |
10338441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 96; Significance: 1e-46; HSPs: 12)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 464 - 723
Target Start/End: Original strand, 35632337 - 35632596
Alignment:
| Q |
464 |
ttaatccagatcgtgcaaaatccgattgtacaggcgtgtcagatgagcctctgtaggacaaattaagtacaggctgcctcggaaacgacgttttgtccaa |
563 |
Q |
| |
|
|||||||||| ||||||||||| ||| | | |||||||||| |||||| | |||||||||||||| |||| || ||||| ||||| || ||||| |||| |
|
|
| T |
35632337 |
ttaatccagaccgtgcaaaatcagatggcagaggcgtgtcaaatgagcatatgtaggacaaattatgtacgcgccgcctcagaaacaactttttggccaa |
35632436 |
T |
|
| Q |
564 |
gaacaccacaatcacacttatatcatcatgaaaagacctccggctcacattgttgcgtcccgtagcagcggcctgaatcttcctataggtaaccttcctt |
663 |
Q |
| |
|
||||| ||||| |||||||||||||||||||||||||||| ||||| ||||| | ||||| |||||| ||||| || | | |||||||||| || ||| |
|
|
| T |
35632437 |
gaacaaaacaatgacacttatatcatcatgaaaagacctcctgctcatattgtcgtgtcccagagcagcagcctggatgtccatataggtaacatttctt |
35632536 |
T |
|
| Q |
664 |
cttttagcagctaccgctagagcggtactcagaagccttttcgcaattccctgcaaaatc |
723 |
Q |
| |
|
|| || |||||| | |||||||| | | ||||||||||||| |||| ||||||||||||| |
|
|
| T |
35632537 |
ctgttggcagcttcagctagagcagaattcagaagcctttttgcaactccctgcaaaatc |
35632596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 764 - 1010
Target Start/End: Original strand, 35632616 - 35632866
Alignment:
| Q |
764 |
gtaaagacccaaatt-gtcgtcaatcaaaaaacacgaagacttattttcattttctaaaggccaaataagtcttcgtgtttcttctcaatatgaatggaa |
862 |
Q |
| |
|
|||||||| |||||| ||| || || ||||||||| ||| ||||||||||||||| ||| | ||| ||| | ||||||| ||| ||||| || |||| |
|
|
| T |
35632616 |
gtaaagactcaaattcgtcatcgataaaaaaacac--agaattattttcattttcttaagactaaacaagcc--cgtgttttttcacaatacaaaaggaa |
35632711 |
T |
|
| Q |
863 |
aaatcaagaaaagaacaagttatagatat------atacatacatttctaggattcttttgaacaatttcagcagcttttttatttgaga-gaaatccca |
955 |
Q |
| |
|
||| |||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||| |||| | |||||| | ||| ||||| |
|
|
| T |
35632712 |
aaaccaagaaaagaacaagtcatagatatggatatatacatacatttcttggattcttttgaacaatttcagctgcttgctcatttgacaagaactccca |
35632811 |
T |
|
| Q |
956 |
aagtccatcagaagcaaatataataaacttatcattatctgttaaaactctagta |
1010 |
Q |
| |
|
||||||| |||| |||||||||| |||||||||||| |||||||||||||||||| |
|
|
| T |
35632812 |
aagtccaacagacgcaaatataagaaacttatcattctctgttaaaactctagta |
35632866 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 459 - 604
Target Start/End: Original strand, 35629167 - 35629312
Alignment:
| Q |
459 |
agtggttaatccagatcgtgcaaaatccgattgtacaggcgtgtcagatgagcctctgtaggacaaattaagtacaggctgcctcggaaacgacgttttg |
558 |
Q |
| |
|
||||||||||||||| ||||||||| | ||| || ||| |||||||||||| | |||||||||||||| |||| ||| |||| |||||||||||||| |
|
|
| T |
35629167 |
agtggttaatccagaccgtgcaaaagcagatggtgtaggtctgtcagatgagcttttgtaggacaaattatgtacgggcatcctcagaaacgacgttttg |
35629266 |
T |
|
| Q |
559 |
tccaagaacaccacaatcacacttatatcatcatgaaaagacctcc |
604 |
Q |
| |
|
|| |||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
35629267 |
tcaaagaacacaacaatcacacttatatcatcatgaaaagacctcc |
35629312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 68; E-Value: 8e-30
Query Start/End: Original strand, 888 - 1010
Target Start/End: Original strand, 35629589 - 35629712
Alignment:
| Q |
888 |
atatatacatacatttctaggattcttttgaacaatttcagcagcttttttatttgaga-gaaatcccaaagtccatcagaagcaaatataataaactta |
986 |
Q |
| |
|
|||||||| ||||||||| ||||| ||||||||||||||| | |||| || |||||| | |||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
35629589 |
atatatacttacatttcttggattgttttgaacaatttcaactgcttgttcatttgacaagaaatcccaaagtccatcagaagcaaatataagaaacttg |
35629688 |
T |
|
| Q |
987 |
tcattatctgttaaaactctagta |
1010 |
Q |
| |
|
||| ||| |||||||||||||||| |
|
|
| T |
35629689 |
tcactatatgttaaaactctagta |
35629712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 848 - 1008
Target Start/End: Original strand, 35635959 - 35636126
Alignment:
| Q |
848 |
tcaatatgaatggaaaaatcaagaaaagaacaagttataga------tatatacatacatttctaggattcttttgaacaatttcagcagcttttttatt |
941 |
Q |
| |
|
|||| ||||| |||||||| |||||||||| |||| ||||| |||| ||||| |||||| | ||| ||||||||||||||| | |||| || ||| |
|
|
| T |
35635959 |
tcaaaatgaaaggaaaaataaagaaaagaaaaagtcatagaaatcgatatacacatatatttcttgaattgttttgaacaatttcaactgcttgttcatt |
35636058 |
T |
|
| Q |
942 |
tgaga-gaaatcccaaagtccatcagaagcaaatataataaacttatcattatctgttaaaactctag |
1008 |
Q |
| |
|
||| | |||||||||||||||||||||||||||||| | ||||||||| || ||||||||| |||||| |
|
|
| T |
35636059 |
tgacaagaaatcccaaagtccatcagaagcaaatatcagaaacttatcgttctctgttaaatctctag |
35636126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 503 - 604
Target Start/End: Original strand, 35635631 - 35635732
Alignment:
| Q |
503 |
cagatgagcctctgtaggacaaattaagtacaggctgcctcggaaacgacgttttgtccaagaacaccacaatcacacttatatcatcatgaaaagacct |
602 |
Q |
| |
|
||||||||| | |||||||||||||| ||| ||| |||| ||| |||| |||||||||||||||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
35635631 |
cagatgagcttttgtaggacaaattatgtaggggcatcctcagaatcgactttttgtccaagaacacaacaatcacacttatatcatcatgaaaatacct |
35635730 |
T |
|
| Q |
603 |
cc |
604 |
Q |
| |
|
|| |
|
|
| T |
35635731 |
cc |
35635732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 134 - 204
Target Start/End: Original strand, 35634769 - 35634839
Alignment:
| Q |
134 |
agtaatgtaaaaacactatacatcatttcagaatacttttgaactttcatttccaaaacaaagcagaacca |
204 |
Q |
| |
|
|||||| |||||||| |||||| |||||||||||||||||| ||||||||||||||||||| ||| ||||| |
|
|
| T |
35634769 |
agtaatttaaaaacagtatacagcatttcagaatacttttgcactttcatttccaaaacaaggcacaacca |
35634839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 678 - 822
Target Start/End: Original strand, 35629386 - 35629534
Alignment:
| Q |
678 |
cgctagagcggtactcagaagccttttcgcaattccctgcaaaatccaccacag--aataattaaattaaaagcctgcaaatataactgtaaagacccaa |
775 |
Q |
| |
|
||||||| | ||||||| ||||||||| ||||||||||||||||||||||| || |||| ||||| ||||||| ||||| ||||| |||| ||| ||| |
|
|
| T |
35629386 |
cgctagaacagtactcacaagcctttttgcaattccctgcaaaatccaccaaagcatataactaaatcaaaagccagcaaacataacggtaatgactcaa |
35629485 |
T |
|
| Q |
776 |
att-gtcgtcaat-caaaaaacacgaagacttattttcattttctaaag |
822 |
Q |
| |
|
||| ||| | || |||||||||| || ||||||||||||||| ||||| |
|
|
| T |
35629486 |
attcgtctttgatgcaaaaaacacaaatacttattttcattttataaag |
35629534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 540 - 611
Target Start/End: Original strand, 35634262 - 35634333
Alignment:
| Q |
540 |
cctcggaaacgacgttttgtccaagaacaccacaatcacacttatatcatcatgaaaagacctccggctcac |
611 |
Q |
| |
|
|||| ||||||| ||||||| |||||||| ||||||||||||||||||||| |||||||||||| |||||| |
|
|
| T |
35634262 |
cctcagaaacgaatttttgtcaaagaacacaacaatcacacttatatcatcacgaaaagacctcctgctcac |
35634333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.0000000001
Query Start/End: Original strand, 679 - 778
Target Start/End: Original strand, 35635807 - 35635906
Alignment:
| Q |
679 |
gctagagcggtactcagaagccttttcgcaattccctgcaaaatccaccacagaataattaaattaaaagcctgcaaatataactgtaaagacccaaatt |
778 |
Q |
| |
|
|||||| | ||||||| ||||||||| ||||||||||| |||| ||||| || |||| ||||| ||||||| ||||| ||||| |||| ||| |||||| |
|
|
| T |
35635807 |
gctagaacagtactcacaagcctttttgcaattccctgaaaaaatcaccatagcataactaaatcaaaagccagcaaacataacagtaatgactcaaatt |
35635906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 221
Target Start/End: Original strand, 35631897 - 35631982
Alignment:
| Q |
136 |
taatgtaaaaacactatacatcatttcagaatacttttgaactttcatttccaaaacaaagcagaaccatacaagtttgtttgcta |
221 |
Q |
| |
|
||||||||||| | |||| | ||||||| ||||| ||||||||| |||||| |||||| |||||| || |||| ||| ||||||| |
|
|
| T |
35631897 |
taatgtaaaaatagtataaagcatttcaaaatacatttgaacttccatttcacaaacaaggcagaagcacacaattttatttgcta |
35631982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 267
Target Start/End: Original strand, 35635190 - 35635265
Alignment:
| Q |
196 |
gcagaaccatacaagtttgtttgctacata---tcagacataatcct-ttgtgtcacaaactccagaacacttatt |
267 |
Q |
| |
|
||||||||| |||||||| ||||||| ||| |||||||||| || |||||||||||||||||| ||||||||| |
|
|
| T |
35635190 |
gcagaaccaaacaagtttatttgctatatagtttcagacataaaactcttgtgtcacaaactccaggacacttatt |
35635265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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