View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5212-Insertion-9 (Length: 734)

Name: NF5212-Insertion-9
Description: NF5212
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5212-Insertion-9
NF5212-Insertion-9
[»] chr7 (60 HSPs)
chr7 (8-391)||(5827669-5828052)
chr7 (28-382)||(47679548-47679897)
chr7 (144-391)||(32585562-32585809)
chr7 (29-236)||(19277739-19277946)
chr7 (197-383)||(24528013-24528199)
chr7 (405-547)||(47129274-47129416)
chr7 (258-391)||(4501673-4501806)
chr7 (71-234)||(4175752-4175913)
chr7 (424-548)||(48243294-48243419)
chr7 (549-630)||(2027011-2027093)
chr7 (549-630)||(641856-641937)
chr7 (415-547)||(7553833-7553966)
chr7 (405-547)||(40094608-40094745)
chr7 (549-630)||(11878370-11878452)
chr7 (549-630)||(17727110-17727190)
chr7 (411-488)||(45433425-45433502)
chr7 (549-629)||(8214089-8214169)
chr7 (549-629)||(18437950-18438029)
chr7 (549-629)||(42057821-42057901)
chr7 (549-630)||(30603603-30603685)
chr7 (549-621)||(749153-749226)
chr7 (302-391)||(10905518-10905607)
chr7 (546-630)||(32626696-32626780)
chr7 (549-621)||(40685553-40685626)
chr7 (549-621)||(48988719-48988792)
chr7 (549-630)||(13964772-13964853)
chr7 (411-536)||(28300424-28300549)
chr7 (549-630)||(46649091-46649172)
chr7 (549-621)||(11300437-11300510)
chr7 (549-621)||(39050168-39050241)
chr7 (549-629)||(33404049-33404128)
chr7 (549-630)||(15630780-15630861)
chr7 (549-630)||(37284513-37284594)
chr7 (405-539)||(45434435-45434568)
chr7 (549-621)||(2280360-2280433)
chr7 (549-621)||(5188088-5188160)
chr7 (549-622)||(20020457-20020530)
chr7 (322-391)||(45613465-45613534)
chr7 (496-547)||(1085469-1085520)
chr7 (503-547)||(8128320-8128364)
chr7 (549-621)||(26090741-26090813)
chr7 (331-391)||(28516919-28516979)
chr7 (549-601)||(40923780-40923832)
chr7 (692-731)||(49149988-49150027)
chr7 (692-731)||(49156678-49156717)
chr7 (549-599)||(11882254-11882304)
chr7 (321-387)||(43857283-43857349)
chr7 (549-621)||(15811438-15811511)
chr7 (405-450)||(45754894-45754939)
chr7 (281-353)||(4175672-4175744)
chr7 (549-601)||(12404776-12404828)
chr7 (549-622)||(19438654-19438728)
chr7 (254-359)||(37258806-37258911)
chr7 (692-733)||(11878511-11878552)
chr7 (549-622)||(17469051-17469124)
chr7 (549-622)||(17584090-17584163)
chr7 (498-547)||(30245385-30245434)
chr7 (692-733)||(30603502-30603543)
chr7 (692-733)||(32626840-32626881)
chr7 (503-548)||(37345815-37345860)
[»] chr5 (54 HSPs)
chr5 (39-391)||(27337108-27337460)
chr5 (39-391)||(433707-434060)
chr5 (28-391)||(15291352-15291715)
chr5 (243-389)||(25662861-25663007)
chr5 (405-547)||(13415977-13416119)
chr5 (216-383)||(3113683-3113850)
chr5 (189-360)||(32269283-32269454)
chr5 (28-177)||(6821533-6821682)
chr5 (405-545)||(26074996-26075136)
chr5 (549-630)||(25852231-25852312)
chr5 (549-630)||(37540791-37540872)
chr5 (549-630)||(37548335-37548416)
chr5 (412-548)||(26074415-26074553)
chr5 (549-630)||(25845596-25845677)
chr5 (159-391)||(6534023-6534255)
chr5 (405-547)||(623997-624140)
chr5 (549-630)||(5583053-5583135)
chr5 (549-630)||(30780320-30780403)
chr5 (549-630)||(15460723-15460804)
chr5 (549-630)||(18895771-18895852)
chr5 (269-391)||(26212153-26212275)
chr5 (405-539)||(35150523-35150662)
chr5 (549-630)||(20339847-20339928)
chr5 (549-630)||(20346441-20346522)
chr5 (549-630)||(40011748-40011829)
chr5 (549-630)||(43028293-43028373)
chr5 (549-621)||(11994396-11994468)
chr5 (549-621)||(14883128-14883201)
chr5 (549-621)||(14889805-14889878)
chr5 (549-621)||(24795828-24795901)
chr5 (549-621)||(24801195-24801268)
chr5 (692-733)||(37540689-37540730)
chr5 (692-733)||(37548233-37548274)
chr5 (331-391)||(13166542-13166602)
chr5 (501-547)||(38427453-38427499)
chr5 (496-547)||(3295233-3295284)
chr5 (411-450)||(9498588-9498627)
chr5 (549-630)||(17939696-17939777)
chr5 (549-630)||(41879495-41879576)
chr5 (549-621)||(7508828-7508900)
chr5 (330-383)||(38446589-38446642)
chr5 (549-601)||(14615747-14615799)
chr5 (549-601)||(22249030-22249082)
chr5 (424-491)||(3295245-3295312)
chr5 (419-505)||(15370274-15370363)
chr5 (549-622)||(5342461-5342535)
chr5 (549-599)||(5453747-5453797)
chr5 (411-449)||(6224382-6224420)
chr5 (549-630)||(19801100-19801181)
chr5 (350-388)||(35310866-35310904)
chr5 (692-733)||(5582952-5582993)
chr5 (692-733)||(18895670-18895711)
chr5 (692-733)||(30780463-30780504)
chr5 (692-733)||(40011647-40011688)
[»] chr6 (45 HSPs)
chr6 (28-391)||(34304912-34305275)
chr6 (39-391)||(32120344-32120694)
chr6 (28-260)||(10402275-10402506)
chr6 (97-391)||(29337483-29337778)
chr6 (40-233)||(32116208-32116400)
chr6 (99-236)||(45090-45227)
chr6 (115-387)||(7199990-7200261)
chr6 (269-391)||(4206166-4206288)
chr6 (405-547)||(2578669-2578813)
chr6 (269-380)||(45239-45350)
chr6 (49-391)||(8374647-8374989)
chr6 (549-630)||(1069915-1069997)
chr6 (549-630)||(7238104-7238186)
chr6 (290-383)||(12401749-12401842)
chr6 (549-630)||(21966389-21966469)
chr6 (405-547)||(2579326-2579470)
chr6 (405-547)||(16107860-16108004)
chr6 (549-630)||(21965727-21965807)
chr6 (321-391)||(32116104-32116174)
chr6 (549-621)||(15298922-15298995)
chr6 (549-621)||(17308979-17309052)
chr6 (549-630)||(30800197-30800277)
chr6 (405-545)||(2579709-2579851)
chr6 (549-630)||(16224433-16224514)
chr6 (549-630)||(25316411-25316492)
chr6 (549-630)||(26203905-26203986)
chr6 (549-630)||(33874090-33874171)
chr6 (549-621)||(11582907-11582980)
chr6 (549-621)||(15332893-15332965)
chr6 (503-547)||(33605875-33605919)
chr6 (169-352)||(23910760-23910943)
chr6 (123-367)||(22986358-22986602)
chr6 (123-367)||(23801792-23802036)
chr6 (692-731)||(25463276-25463315)
chr6 (405-450)||(2579042-2579088)
chr6 (549-630)||(4106002-4106083)
chr6 (549-601)||(25463135-25463187)
chr6 (549-601)||(34134730-34134782)
chr6 (549-580)||(8768915-8768946)
chr6 (549-580)||(24561601-24561632)
chr6 (549-622)||(10471481-10471555)
chr6 (549-622)||(23022063-23022137)
chr6 (549-599)||(24719983-24720033)
chr6 (549-598)||(19097495-19097544)
chr6 (551-580)||(19818296-19818325)
[»] chr2 (58 HSPs)
chr2 (29-391)||(9684744-9685107)
chr2 (39-387)||(28225419-28225762)
chr2 (29-391)||(20142075-20142432)
chr2 (29-391)||(41867238-41867600)
chr2 (81-391)||(17345053-17345363)
chr2 (45-325)||(18744364-18744644)
chr2 (39-391)||(19161168-19161517)
chr2 (179-391)||(44686832-44687044)
chr2 (249-391)||(4412616-4412758)
chr2 (42-296)||(8588596-8588849)
chr2 (405-528)||(40734064-40734187)
chr2 (79-295)||(34185439-34185653)
chr2 (405-547)||(36785780-36785923)
chr2 (411-547)||(3672888-3673025)
chr2 (549-630)||(20964135-20964216)
chr2 (542-630)||(30197318-30197406)
chr2 (549-630)||(4076723-4076805)
chr2 (549-630)||(1060962-1061043)
chr2 (549-630)||(1066345-1066426)
chr2 (423-547)||(7598427-7598552)
chr2 (549-621)||(28926763-28926836)
chr2 (549-621)||(42552466-42552539)
chr2 (405-532)||(6421565-6421690)
chr2 (549-630)||(11361044-11361125)
chr2 (549-621)||(4072340-4072413)
chr2 (549-621)||(36985340-36985413)
chr2 (549-630)||(40584784-40584868)
chr2 (549-630)||(33355-33436)
chr2 (497-547)||(38796437-38796487)
chr2 (549-630)||(21121333-21121413)
chr2 (550-630)||(27728814-27728893)
chr2 (411-530)||(23346422-23346541)
chr2 (549-630)||(36593657-36593738)
chr2 (71-141)||(33611937-33612006)
chr2 (549-601)||(35584619-35584671)
chr2 (456-539)||(6421967-6422050)
chr2 (692-731)||(23832534-23832573)
chr2 (497-548)||(28531526-28531577)
chr2 (500-547)||(35580603-35580650)
chr2 (549-621)||(21604072-21604145)
chr2 (549-630)||(29065779-29065860)
chr2 (329-391)||(33612171-33612233)
chr2 (405-459)||(40733699-40733753)
chr2 (549-630)||(44091834-44091915)
chr2 (503-547)||(42514912-42514956)
chr2 (549-580)||(19655164-19655195)
chr2 (549-580)||(22859689-22859720)
chr2 (411-450)||(38796490-38796529)
chr2 (549-630)||(2942260-2942341)
chr2 (692-733)||(4076865-4076906)
chr2 (549-622)||(17593218-17593296)
chr2 (692-733)||(20964275-20964316)
chr2 (549-598)||(24427616-24427665)
chr2 (549-598)||(27036554-27036603)
chr2 (692-733)||(30197218-30197259)
chr2 (411-463)||(35580643-35580696)
chr2 (405-442)||(42514829-42514866)
chr2 (692-733)||(44091732-44091773)
[»] chr8 (69 HSPs)
chr8 (28-391)||(24125443-24125805)
chr8 (29-391)||(37517504-37517866)
chr8 (28-384)||(25021131-25021489)
chr8 (113-381)||(500652-500920)
chr8 (238-391)||(39435082-39435235)
chr8 (405-532)||(147631-147759)
chr8 (179-379)||(42921610-42921810)
chr8 (413-543)||(9483027-9483158)
chr8 (549-630)||(14765061-14765143)
chr8 (411-543)||(9482864-9482997)
chr8 (52-174)||(10950552-10950674)
chr8 (52-174)||(10958557-10958679)
chr8 (405-548)||(40518380-40518526)
chr8 (249-360)||(4006990-4007104)
chr8 (156-391)||(10189958-10190194)
chr8 (168-391)||(36005917-36006137)
chr8 (80-362)||(139747-140027)
chr8 (411-547)||(8918981-8919117)
chr8 (105-384)||(40839978-40840254)
chr8 (549-630)||(33799149-33799230)
chr8 (412-547)||(45122816-45122946)
chr8 (549-630)||(27910332-27910413)
chr8 (549-630)||(27956751-27956832)
chr8 (405-544)||(9608933-9609072)
chr8 (549-630)||(4979633-4979714)
chr8 (549-630)||(10949478-10949559)
chr8 (549-630)||(10957483-10957564)
chr8 (549-630)||(14737568-14737649)
chr8 (549-630)||(16888044-16888125)
chr8 (549-621)||(13362709-13362781)
chr8 (549-598)||(14562914-14562963)
chr8 (549-621)||(28980000-28980073)
chr8 (549-621)||(28985220-28985293)
chr8 (549-621)||(36801192-36801264)
chr8 (549-621)||(37879145-37879218)
chr8 (549-630)||(41242904-41242984)
chr8 (549-630)||(23225491-23225572)
chr8 (549-630)||(23746694-23746776)
chr8 (549-630)||(26486765-26486846)
chr8 (549-630)||(35540352-35540432)
chr8 (549-630)||(37235047-37235128)
chr8 (411-449)||(40518258-40518296)
chr8 (549-621)||(213300-213373)
chr8 (549-621)||(238881-238954)
chr8 (549-621)||(726923-726996)
chr8 (549-621)||(752619-752692)
chr8 (549-621)||(792236-792309)
chr8 (549-621)||(799424-799497)
chr8 (549-621)||(850817-850890)
chr8 (405-450)||(34835055-34835100)
chr8 (408-508)||(37544366-37544466)
chr8 (405-490)||(1014138-1014222)
chr8 (405-463)||(18371913-18371971)
chr8 (496-547)||(3038144-3038196)
chr8 (507-547)||(9482816-9482856)
chr8 (549-601)||(35033149-35033201)
chr8 (39-102)||(4700344-4700407)
chr8 (549-580)||(6587430-6587461)
chr8 (549-580)||(20984601-20984632)
chr8 (549-600)||(21986312-21986363)
chr8 (549-600)||(22003520-22003571)
chr8 (549-580)||(31419494-31419525)
chr8 (549-622)||(14417308-14417382)
chr8 (549-629)||(4521519-4521599)
chr8 (277-346)||(10556106-10556175)
chr8 (692-733)||(16887943-16887984)
chr8 (549-598)||(23116518-23116567)
chr8 (692-733)||(33799048-33799089)
chr8 (475-532)||(45122505-45122562)
[»] chr1 (61 HSPs)
chr1 (39-378)||(28040468-28040806)
chr1 (29-362)||(19035871-19036203)
chr1 (39-391)||(7794258-7794607)
chr1 (28-384)||(37200677-37201031)
chr1 (107-357)||(38732032-38732282)
chr1 (198-391)||(34644981-34645173)
chr1 (405-545)||(34649619-34649759)
chr1 (405-545)||(37555908-37556049)
chr1 (411-547)||(41157180-41157317)
chr1 (549-630)||(24423303-24423383)
chr1 (549-630)||(28557231-28557312)
chr1 (549-630)||(29152104-29152186)
chr1 (549-630)||(18417428-18417509)
chr1 (549-629)||(38908845-38908926)
chr1 (549-629)||(38911693-38911774)
chr1 (549-630)||(39093571-39093652)
chr1 (549-621)||(48427163-48427236)
chr1 (549-621)||(52399551-52399624)
chr1 (118-381)||(15585285-15585548)
chr1 (544-630)||(18027478-18027564)
chr1 (249-384)||(22375141-22375275)
chr1 (549-630)||(3653431-3653512)
chr1 (549-630)||(6739820-6739901)
chr1 (549-630)||(20277997-20278078)
chr1 (549-621)||(26739861-26739934)
chr1 (81-241)||(972218-972375)
chr1 (29-143)||(7435009-7435123)
chr1 (549-630)||(17145577-17145658)
chr1 (549-630)||(41050992-41051072)
chr1 (549-621)||(11385245-11385318)
chr1 (549-621)||(17378721-17378793)
chr1 (549-598)||(24065574-24065623)
chr1 (405-450)||(31767094-31767139)
chr1 (549-621)||(39190449-39190522)
chr1 (57-207)||(36154622-36154771)
chr1 (549-622)||(36917086-36917159)
chr1 (549-601)||(33684978-33685030)
chr1 (405-547)||(41184240-41184384)
chr1 (405-503)||(34364687-34364786)
chr1 (405-450)||(66404-66450)
chr1 (249-387)||(37917644-37917782)
chr1 (692-733)||(38908742-38908783)
chr1 (692-733)||(38911590-38911631)
chr1 (503-547)||(22077709-22077753)
chr1 (343-391)||(22347292-22347340)
chr1 (503-547)||(47379999-47380043)
chr1 (492-547)||(30630853-30630908)
chr1 (549-621)||(11387264-11387335)
chr1 (549-622)||(21948758-21948832)
chr1 (549-622)||(21962319-21962393)
chr1 (549-622)||(24849416-24849490)
chr1 (549-621)||(27694257-27694328)
chr1 (549-599)||(31536060-31536110)
chr1 (549-599)||(31564777-31564827)
chr1 (405-450)||(44290755-44290801)
chr1 (692-733)||(3653330-3653371)
chr1 (692-733)||(6739961-6740002)
chr1 (692-733)||(18417569-18417610)
chr1 (692-733)||(20277896-20277937)
chr1 (549-598)||(21920143-21920192)
chr1 (498-547)||(34364816-34364865)
[»] chr4 (49 HSPs)
chr4 (39-384)||(53170920-53171265)
chr4 (39-391)||(56461455-56461806)
chr4 (110-384)||(16957958-16958230)
chr4 (27-200)||(23809027-23809200)
chr4 (412-539)||(20826024-20826152)
chr4 (411-547)||(54108723-54108858)
chr4 (138-296)||(25707012-25707171)
chr4 (405-545)||(22028203-22028343)
chr4 (405-547)||(2740871-2741013)
chr4 (38-362)||(48505537-48505861)
chr4 (405-547)||(43174323-43174466)
chr4 (414-547)||(16889369-16889503)
chr4 (549-630)||(35149894-35149975)
chr4 (549-630)||(29383511-29383591)
chr4 (405-547)||(23817512-23817655)
chr4 (549-630)||(15471352-15471433)
chr4 (549-630)||(23436732-23436814)
chr4 (549-630)||(29449483-29449565)
chr4 (423-532)||(39404217-39404329)
chr4 (411-547)||(45489548-45489684)
chr4 (405-547)||(49076666-49076808)
chr4 (549-630)||(390376-390457)
chr4 (549-630)||(3260741-3260822)
chr4 (549-621)||(26394940-26395012)
chr4 (549-629)||(29456168-29456249)
chr4 (319-391)||(12917986-12918058)
chr4 (549-630)||(1583160-1583241)
chr4 (549-621)||(17667329-17667402)
chr4 (406-483)||(50627671-50627748)
chr4 (405-532)||(44621179-44621307)
chr4 (549-630)||(52499802-52499882)
chr4 (549-622)||(19129086-19129159)
chr4 (420-539)||(31691348-31691467)
chr4 (549-622)||(21880864-21880938)
chr4 (249-351)||(32335307-32335408)
chr4 (549-599)||(53906048-53906098)
chr4 (549-630)||(54845687-54845768)
chr4 (692-733)||(29449382-29449423)
chr4 (692-733)||(29456066-29456107)
chr4 (550-630)||(37624092-37624172)
chr4 (549-622)||(34771490-34771565)
chr4 (456-547)||(44621275-44621367)
chr4 (549-601)||(47873191-47873243)
chr4 (191-282)||(24222415-24222506)
chr4 (405-450)||(41370537-41370583)
chr4 (549-630)||(49549907-49549988)
chr4 (692-733)||(390517-390558)
chr4 (692-733)||(3260640-3260681)
chr4 (550-599)||(45003689-45003738)
[»] chr3 (49 HSPs)
chr3 (28-384)||(52411234-52411587)
chr3 (120-391)||(53786123-53786389)
chr3 (39-384)||(29862219-29862568)
chr3 (28-344)||(49018414-49018729)
chr3 (158-391)||(35236543-35236776)
chr3 (411-539)||(3135298-3135426)
chr3 (542-630)||(53572073-53572161)
chr3 (549-630)||(51848449-51848530)
chr3 (549-628)||(29492778-29492857)
chr3 (549-630)||(21351503-21351584)
chr3 (405-536)||(33803099-33803230)
chr3 (456-547)||(8328125-8328216)
chr3 (549-621)||(28758192-28758265)
chr3 (549-630)||(54833970-54834050)
chr3 (549-628)||(3107724-3107802)
chr3 (549-599)||(28752025-28752075)
chr3 (284-391)||(7501724-7501830)
chr3 (472-547)||(8328246-8328321)
chr3 (549-630)||(21152243-21152323)
chr3 (549-630)||(23866568-23866648)
chr3 (549-621)||(3554490-3554562)
chr3 (549-621)||(3783572-3783645)
chr3 (549-621)||(17596033-17596106)
chr3 (406-514)||(41359632-41359741)
chr3 (423-547)||(54018033-54018157)
chr3 (114-387)||(43123563-43123843)
chr3 (549-630)||(45610950-45611031)
chr3 (503-548)||(21832556-21832601)
chr3 (405-481)||(37990878-37990954)
chr3 (549-630)||(10767040-10767122)
chr3 (692-731)||(29492921-29492960)
chr3 (412-483)||(32462799-32462870)
chr3 (293-360)||(52741121-52741188)
chr3 (405-450)||(22304375-22304421)
chr3 (549-630)||(54518741-54518822)
chr3 (549-622)||(15374005-15374078)
chr3 (406-450)||(3135035-3135079)
chr3 (549-601)||(50656841-50656893)
chr3 (549-601)||(51854585-51854637)
chr3 (405-440)||(52634855-52634890)
chr3 (311-389)||(37992733-37992811)
chr3 (692-733)||(3107863-3107904)
chr3 (549-598)||(9772708-9772757)
chr3 (692-733)||(10767182-10767223)
chr3 (692-733)||(21351643-21351684)
chr3 (549-621)||(21452591-21452664)
chr3 (549-621)||(21457765-21457838)
chr3 (692-733)||(45611091-45611132)
chr3 (692-733)||(53571973-53572014)
[»] scaffold0186 (1 HSPs)
scaffold0186 (28-391)||(20136-20503)
[»] scaffold0391 (3 HSPs)
scaffold0391 (411-547)||(1324-1461)
scaffold0391 (405-545)||(1518-1661)
scaffold0391 (428-547)||(3203-3323)
[»] scaffold0654 (1 HSPs)
scaffold0654 (549-621)||(8537-8610)
[»] scaffold0457 (1 HSPs)
scaffold0457 (550-626)||(13008-13085)
[»] scaffold0069 (1 HSPs)
scaffold0069 (556-629)||(33462-33534)
[»] scaffold0018 (1 HSPs)
scaffold0018 (549-626)||(63951-64027)
[»] scaffold0045 (1 HSPs)
scaffold0045 (549-629)||(16790-16869)
[»] scaffold0734 (1 HSPs)
scaffold0734 (406-547)||(5577-5718)
[»] scaffold0126 (1 HSPs)
scaffold0126 (549-630)||(31075-31156)
[»] scaffold0089 (2 HSPs)
scaffold0089 (549-630)||(19299-19380)
scaffold0089 (692-733)||(19198-19239)
[»] scaffold0466 (1 HSPs)
scaffold0466 (549-630)||(10508-10589)
[»] scaffold0123 (1 HSPs)
scaffold0123 (549-629)||(10913-10993)
[»] scaffold2150 (1 HSPs)
scaffold2150 (549-630)||(860-940)
[»] scaffold0102 (1 HSPs)
scaffold0102 (549-630)||(12964-13045)
[»] scaffold0088 (1 HSPs)
scaffold0088 (549-622)||(31184-31258)
[»] scaffold0078 (1 HSPs)
scaffold0078 (412-490)||(5170-5246)
[»] scaffold0041 (1 HSPs)
scaffold0041 (549-601)||(49263-49315)
[»] scaffold0191 (1 HSPs)
scaffold0191 (549-622)||(6205-6279)
[»] scaffold0154 (1 HSPs)
scaffold0154 (549-630)||(19187-19268)
[»] scaffold0106 (1 HSPs)
scaffold0106 (549-599)||(28108-28158)
[»] scaffold0011 (2 HSPs)
scaffold0011 (549-599)||(57494-57544)
scaffold0011 (549-600)||(146408-146459)
[»] scaffold0606 (1 HSPs)
scaffold0606 (549-601)||(434-486)
[»] scaffold0062 (1 HSPs)
scaffold0062 (549-585)||(9226-9262)
[»] scaffold0560 (1 HSPs)
scaffold0560 (549-619)||(1792-1863)
[»] scaffold0192 (1 HSPs)
scaffold0192 (549-580)||(5990-6021)
[»] scaffold0363 (1 HSPs)
scaffold0363 (549-622)||(1337-1411)
[»] scaffold0310 (1 HSPs)
scaffold0310 (549-622)||(7038-7112)
[»] scaffold0395 (1 HSPs)
scaffold0395 (550-599)||(4836-4885)
[»] scaffold0320 (1 HSPs)
scaffold0320 (549-621)||(201-274)


Alignment Details
Target: chr7 (Bit Score: 304; Significance: 1e-171; HSPs: 60)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 8 - 391
Target Start/End: Complemental strand, 5828052 - 5827669
Alignment:
Q  8 atagcgagatatgtggtatatatggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgca 107  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| | |||||| ||||||||||| ||||||||||||| ||||    
T  5828052 atagtgagatatgtggtatatatggactcgaattttgataatgctttggatggtcttcgctgtacgattccagattttgacattagtagttttacttgca 5827953  T
Q  108 aggacaccgtccctcctaaagcacaacatgttttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagaca 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||    
T  5827952 aggacaccgtccctcctaaagcacaacatgttttggcgagtgctcttcttaataaaattggtcaagatatagaagttaagtttgacatggccactagaca 5827853  T
Q  208 gaaggcaattttaggatgtttgcaagcagtacattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtat 307  Q
    ||||||| ||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||     
T  5827852 gaaggcagttttaggatgtttgcaagcagcacatgctcaaaattttcttctagctatcccaattgatgggttaggtcagcatatgtcaccagtggagtac 5827753  T
Q  308 cgtattatccttcgatattgtcttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtgtctggat 391  Q
    |||| ||||||||||||| ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  5827752 cgtactatccttcgatatcgtcttatgattccactatttcttattgatgaggtgtgccctgtttgtcgtaaggcgtgtctggat 5827669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 170; E-Value: 7e-91
Query Start/End: Original strand, 28 - 382
Target Start/End: Complemental strand, 47679897 - 47679548
Alignment:
Q  28 tatggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaa 127  Q
    |||||||||| |||||||||||| |||||||| |||||| |  |||||| || |||||||||||||||||||||| ||||||||    ||||||||||||    
T  47679897 tatggactcagattttgataatgttttggatgatcttcgtgttacgattccaaattttgacgttagtagttttacttgcaaggatt--gtccctcctaaa 47679800  T
Q  128 gcacaacatgttttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtt 227  Q
    |||| ||||||||||| |||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||    
T  47679799 gcaccacatgttttggagagtactctttttagtaaaattgttcaagatatggaagttaagtttgacatgaccactagacagaagacagttttaggatgtt 47679700  T
Q  228 tgcaagcagtacattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattg 327  Q
    |||||| || |||| ||||  ||||||||||||||| ||  ||||||| |||| |||| |||||||   ||| |||||| |||| ||||| | |||||||    
T  47679699 tgcaagtagcacatgctcaggattttcttctagctatcctgattgatgagttatgtcaacatatgt---cagtggagtaacgtactatccatagatattg 47679603  T
Q  328 tcttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcg 382  Q
     || ||||||||||||||| ||||||| ||||||| | |||||||||||||||||    
T  47679602 cctcatgattccactatttgctattgacgaggtgtgctctgtttgtcgtaaggcg 47679548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 144 - 391
Target Start/End: Complemental strand, 32585809 - 32585562
Alignment:
Q  144 cgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtttgcaagcagtacattc 243  Q
    ||||||||||| |||||||||||||| || ||||  |||||||||||||||||||||||||||||||| ||  |||||||||||||||| ||  | ||||    
T  32585809 cgagtgctctttttagtaaaattgtttaatatatgaaagttaagtttgacatgaccactagacagaagacacctttaggatgtttgcaatcaacatattc 32585710  T
Q  244 tcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatgattccacta 343  Q
    |||  |||||||||| |||| ||  |||||||| ||| |||||||||||||||||  | |||| |||| ||||||| ||| | |||||||||||||||||    
T  32585709 tcatgattttcttctggctatcctgattgatggattatgtcagcatatgtcaccaatgaagtaccgtactatccttagatttcgtcttatgattccacta 32585610  T
Q  344 tttcctattgatgaggtgtaccctgtttgtcgtaaggcgtgtctggat 391  Q
    ||||||||| ||||||||| |||| ||||||||||||| |||||||||    
T  32585609 tttcctattaatgaggtgtgccctatttgtcgtaaggcatgtctggat 32585562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 108; E-Value: 7e-54
Query Start/End: Original strand, 29 - 236
Target Start/End: Complemental strand, 19277946 - 19277739
Alignment:
Q  29 atggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaag 128  Q
    ||||||||  ||||||||| ||||||||||||||||||  | |||||||||||| |||| ||||| | ||||||  |||| |||| ||||||||||||||    
T  19277946 atggactcggattttgatagtgctttggatggtcttcgtagtacgatttcagatattgatgttagcatttttactagcaaagacatcgtccctcctaaag 19277847  T
Q  129 cacaacatgttttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgttt 228  Q
    ||||||||||||||| |||||||||| ||||||||| ||| || ||||| ||||| ||||||||||||||||| || |||||||| ||||| ||||||||    
T  19277846 cacaacatgttttggtgagtgctctttttagtaaaagtgtccaggatatggaagtcaagtttgacatgaccacgaggcagaaggcgatttttggatgttt 19277747  T
Q  229 gcaagcag 236  Q
    ||||||||    
T  19277746 gcaagcag 19277739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 197 - 383
Target Start/End: Complemental strand, 24528199 - 24528013
Alignment:
Q  197 accactagacagaaggcaattttaggatgtttgcaagcagtacattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcac 296  Q
    ||||| |||||||||||||| || |||||||||||||||  | || ||||  ||||||||||||||| |   |||||||||||||| || ||||||||||    
T  24528199 accacgagacagaaggcaatatttggatgtttgcaagcataatatgctcaggattttcttctagctatcatgattgatgggttaggacaacatatgtcac 24528100  T
Q  297 cagcggagtatcgtattatccttcgatattgtcttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgt 383  Q
    ||| |||||||| || |||| || ||||| | ||||||||||||||||||| ||||| ||||| || ||||||||||||||||||||    
T  24528099 cagtggagtatcatactatcattagatatcgccttatgattccactatttcttattgttgaggggtgccctgtttgtcgtaaggcgt 24528013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 405 - 547
Target Start/End: Original strand, 47129274 - 47129416
Alignment:
Q  405 cagtgatatcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgttt 504  Q
    ||||| |||||||||||||||||| ||| ||| ||| ||||||||| ||  |||||||| | || ||| ||||||||||||||||| ||| |||||||||    
T  47129274 cagtggtatcagagccccgttcgatgaatggtgcgatcgaggcagccggtccgtttgcgtagaaagcaacaacggcggtgcaagcagtgtcggtccgttt 47129373  T
Q  505 gcggagaaaccaacaacgacgatacaagcaagtaagagcttcc 547  Q
    |||||||||||| ||||||| ||||||||||||||||||||||    
T  47129374 gcggagaaaccagcaacgacaatacaagcaagtaagagcttcc 47129416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 258 - 391
Target Start/End: Complemental strand, 4501806 - 4501673
Alignment:
Q  258 tagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatgattccactatttcctattgatga 357  Q
    |||||| ||| ||||||  ||||||||||||||||||||||  ||||||||||| ||||||| ||||| |||||||||||||| ||||| ||||||||||    
T  4501806 tagctatcccgattgatatgttaggtcagcatatgtcaccaatggagtatcgtactatccttagatatcgtcttatgattccattattttctattgatga 4501707  T
Q  358 ggtgtaccctgtttgtcgtaaggcgtgtctggat 391  Q
    |||||  | |||||||||||||||||| ||||||    
T  4501706 ggtgtgtcatgtttgtcgtaaggcgtgcctggat 4501673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 71 - 234
Target Start/End: Complemental strand, 4175913 - 4175752
Alignment:
Q  71 acgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgttttggcgagtgctcttcttagtaaaattgttc 170  Q
    |||||||  |||||||||||||  | |||||| ||||||||||||||||||  |||||||||||||| ||||||||||| |||| || |||||| |||||    
T  4175913 acgatttttgattttgacgttaacaattttacttgcaaggacaccgtccctgttaaagcacaacatgctttggcgagtg-tcttttttgtaaaagtgttc 4175815  T
Q  171 aagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtttgcaagc 234  Q
    ||||||| |||| ||| |||||||||||||||||| |||||  | ||||||| |||||||||||    
T  4175814 aagatatggaagctaa-tttgacatgaccactagatagaagatagttttagggtgtttgcaagc 4175752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 424 - 548
Target Start/End: Complemental strand, 48243419 - 48243294
Alignment:
Q  424 ttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgc-aagcaatgttggtccgtttgcggagaaaccaacaacg 522  Q
    ||||||||||||||||||||||||||| ||  |||||||||| || |||||||||||||| | ||||| ||| ||| |||| |||||||||||| |||||    
T  48243419 ttcgacgaagggtacgaccgaggcagccggtccgtttgcgcagaaagcagcaacggcggtacaaagcagtgtcggttcgttggcggagaaaccagcaacg 48243320  T
Q  523 acgatacaagcaagtaagagcttcca 548  Q
     |||||||||||||||||| ||||||    
T  48243319 gcgatacaagcaagtaagaacttcca 48243294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 2027093 - 2027011
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    |||||||||||||||||||||||||| | |||||||||| |||||||||||| ||||||||||| ||||||||||||||||||    
T  2027093 gtaacaccccgttacccaaaaacaataacatagcatatatacatcagagtaattccacaaacgggcatgctacacgtcatttc 2027011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 641856 - 641937
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||| |||||||||||||||| ||| || |||||||||||||||||||| || ||||||||||||||||||    
T  641856 gtaacaccccgttactcaaaaacaattaaataacatttacacatcagagtaatccacaaatgggcatgctacacgtcatttc 641937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 415 - 547
Target Start/End: Original strand, 7553833 - 7553966
Alignment:
Q  415 agagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgtttgcggagaaac 514  Q
    |||||||||||||| ||||||| |||  |||||||  ||  |||||||||| || ||||||| ||||||||||||| ||||||||||||||| |||||||    
T  7553833 agagccccgttcgatgaagggtgcgattgaggcagtcggtccgtttgcgcagaaagcagcaatggcggtgcaagcagtgttggtccgtttgcagagaaac 7553932  T
Q  515 caacaacgacgatacaagc-aagtaagagcttcc 547  Q
    || ||||| ||| ||| || ||||||||||||||    
T  7553933 cagcaacggcgacacatgcaaagtaagagcttcc 7553966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 405 - 547
Target Start/End: Complemental strand, 40094745 - 40094608
Alignment:
Q  405 cagtgatatcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgttt 504  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||| ||  |||||||||| || | ||||||||||||     || ||| |||| | ||    
T  40094745 cagtggtatcagagccctgttcgacgaagggtacgaccgaggcagccggtccgtttgcgcagaaagtagcaacggcggt----acagtgtcggtctg-tt 40094651  T
Q  505 gcggagaaaccaacaacgacgatacaagcaagtaagagcttcc 547  Q
    ||||| |||||| |||| |||||||||||||||||||||||||    
T  40094650 gcggataaaccagcaacaacgatacaagcaagtaagagcttcc 40094608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 11878370 - 11878452
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagta-atccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||||||  ||||||||||| ||||||||||||||||||    
T  11878370 gtaacaccccgttacccaaaagcaattaaatagcaaatatacatcagagtagttccacaaacgggcatgctacacgtcatttc 11878452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 17727190 - 17727110
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcatttc 630  Q
    |||||||||||||||| ||||||||||||||| ||| || ||||||||||||||||| ||||| ||||||||||||||||||    
T  17727190 gtaacaccccgttaccaaaaaacaattaaataacatttatacatcagagtaatccac-aacgggcatgctacacgtcatttc 17727110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 411 - 488
Target Start/End: Original strand, 45433425 - 45433502
Alignment:
Q  411 tatcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaag 488  Q
    ||||||||||| ||||||| |||||||||||||||||||||||  ||||||||||||| |||||||||||||| ||||    
T  45433425 tatcagagcccggttcgacaaagggtacgaccgaggcagctggtccgtttgcgcataaagcagcaacggcggttcaag 45433502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 549 - 629
Target Start/End: Complemental strand, 8214169 - 8214089
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcattt 629  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||   ||||| |||| ||||||||||||    
T  8214169 gtaacaccccgttacccaaaaacagtaaaatagcatataaacatcagagtaatcccacaacgggcatgttacacgtcattt 8214089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 549 - 629
Target Start/End: Complemental strand, 18438029 - 18437950
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcattt 629  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||||||| | ||||| |||||||||| ||||||    
T  18438029 gtaacaccccgttacccaaaaacaattaaataacatttaaacatcagagtaatccgc-aacgggcatgctacacatcattt 18437950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 549 - 629
Target Start/End: Original strand, 42057821 - 42057901
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcattt 629  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||||||||   ||||| |||| ||||||||||||    
T  42057821 gtaacaccccgttacccaaaaacagtaaaatagcatataaacatcagagtaatcccacaacgggcatgttacacgtcattt 42057901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 30603685 - 30603603
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| ||||||||||||| | | |||||||||||| || |||||||| ||||||||||||||||||    
T  30603685 gtaacaccccgttacccaaaagcaattaaatagcaaacatacatcagagtaattctacaaacgggcatgctacacgtcatttc 30603603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 549 - 621
Target Start/End: Original strand, 749153 - 749226
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| | || ||||||| |||||||||    
T  749153 gtaacaccccgttacccaaaagcaattaaatagcatataaacatcagagtatttcaccaaacgggcatgctaca 749226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 302 - 391
Target Start/End: Complemental strand, 10905607 - 10905518
Alignment:
Q  302 gagtatcgtattatccttcgatattgtcttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtgtctggat 391  Q
    |||||||||| ||||||| |||||  ||||||||||||||||||||  ||||||||||||| |||| ||||||||||||| || ||||||    
T  10905607 gagtatcgtactatccttagatatcatcttatgattccactatttctcattgatgaggtgtgccctatttgtcgtaaggcttgcctggat 10905518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 546 - 630
Target Start/End: Original strand, 32626696 - 32626780
Alignment:
Q  546 ccagtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagta-atccacaaacggtcatgctacacgtcatttc 630  Q
    |||||||||||||||||||||||| ||||||||||||| ||| |||||||||||  ||||| ||||| ||||||||||||||||||    
T  32626696 ccagtaacaccccgttacccaaaagcaattaaatagcaaatatacatcagagtagttccac-aacgggcatgctacacgtcatttc 32626780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 549 - 621
Target Start/End: Complemental strand, 40685626 - 40685553
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| | || ||||||| |||||||||    
T  40685626 gtaacaccccgttacccaaaagcaattaaatagcatataaacatcagagtatttcaccaaacgggcatgctaca 40685553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 549 - 621
Target Start/End: Complemental strand, 48988792 - 48988719
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| | || ||||||| |||||||||    
T  48988792 gtaacaccccgttacccaaaagcaattaaatagcatataaacatcagagtatttcaccaaacgggcatgctaca 48988719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 13964853 - 13964772
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaat-ccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| |||||||||| || ||| ||||||||||||| |||||| ||| ||||||||||||||||||    
T  13964853 gtaacaccccgttacccaaaagcaattaaataacaaatatacatcagagtaattccacaa-cggacatgctacacgtcatttc 13964772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 411 - 536
Target Start/End: Complemental strand, 28300549 - 28300424
Alignment:
Q  411 tatcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgtttgc-gga 509  Q
    ||||||||||   |||||||||||||||||||||||||| | | ||  ||||||| || ||||||||| |||| |||||| ||| ||||| ||||| |||    
T  28300549 tatcagagcctgattcgacgaagggtacgaccgaggcag-tcggtccattgcgcagaaagcagcaacgacggtacaagcagtgtcggtccatttgctgga 28300451  T
Q  510 gaaaccaacaacgacgatacaagcaag 536  Q
    ||||||| |||||||| ||||||||||    
T  28300450 gaaaccagcaacgacgttacaagcaag 28300424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 46649091 - 46649172
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| |||||||||| || ||| |||||||||||| ||||| ||||| ||||||||||||||||||    
T  46649091 gtaacaccccgttacccaaaagcaattaaataacagatatacatcagagtaattccac-aacgggcatgctacacgtcatttc 46649172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 549 - 621
Target Start/End: Complemental strand, 11300510 - 11300437
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||| | || ||||||| |||||||||    
T  11300510 gtaacaccccgttacccaaaagcaataaaatagcatataaacatcagagtatttcaccaaacgggcatgctaca 11300437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 549 - 621
Target Start/End: Original strand, 39050168 - 39050241
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    ||||||||||||||||||||| |||||||||||||||||||||| |||||| | || ||||||| |||||||||    
T  39050168 gtaacaccccgttacccaaaagcaattaaatagcatataaacattagagtatttcaccaaacgggcatgctaca 39050241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 549 - 629
Target Start/End: Original strand, 33404049 - 33404128
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcattt 629  Q
    |||||| ||||||||||||||||||||||||| ||| || | ||||||||||||||| ||||| |||||||||| ||||||    
T  33404049 gtaacatcccgttacccaaaaacaattaaataacatttatatatcagagtaatccac-aacgggcatgctacacatcattt 33404128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 15630780 - 15630861
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| |||||||||| || |||  ||||||||||| ||||| ||||| ||||||||||||||||||    
T  15630780 gtaacaccccgttacccaaaagcaattaaataacaaatattcatcagagtaattccac-aacgggcatgctacacgtcatttc 15630861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 37284513 - 37284594
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| |||||||||| || |||  ||||||||||| ||||| ||||| ||||||||||||||||||    
T  37284513 gtaacaccccgttacccaaaagcaattaaataacaaatattcatcagagtaattccac-aacgggcatgctacacgtcatttc 37284594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 405 - 539
Target Start/End: Original strand, 45434435 - 45434568
Alignment:
Q  405 cagtgatatcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgttt 504  Q
    ||||| |||| |||||| ||||||| ||||||||||| |||| |||  |  ||||| ||||||| ||||||||| || | |||| | ||| |||| ||||    
T  45434435 cagtggtatcggagcccggttcgacaaagggtacgac-gaggtagccagtccgtttccgcataaagcagcaacgacgatacaagtagtgtcggtctgttt 45434533  T
Q  505 gcggagaaaccaacaacgacgatacaagcaagtaa 539  Q
    |||||||||| | ||||| ||||||||||||||||    
T  45434534 gcggagaaactagcaacggcgatacaagcaagtaa 45434568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 621
Target Start/End: Original strand, 2280360 - 2280433
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    |||||||||||||||||||||  ||| |||||||||||||||||||||||| | || ||||||| |||||||||    
T  2280360 gtaacaccccgttacccaaaaggaataaaatagcatataaacatcagagtattacaccaaacgggcatgctaca 2280433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 621
Target Start/End: Complemental strand, 5188160 - 5188088
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctaca 621  Q
    ||||||||||||||||||||  |||| ||||| ||||||||||||||||||| ||||||||||| |||||||||    
T  5188160 gtaacaccccgttacccaaag-caataaaataacatataaacatcagagtaattccacaaacgggcatgctaca 5188088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 622
Target Start/End: Complemental strand, 20020530 - 20020457
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacac 622  Q
    |||||||||||||||||||||||||||||||| || |||  |||||||||| | |||| |||| ||||||||||    
T  20020530 gtaacaccccgttacccaaaaacaattaaataacaaatattcatcagagtacttcacatacgggcatgctacac 20020457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 322 - 391
Target Start/End: Original strand, 45613465 - 45613534
Alignment:
Q  322 atattgtcttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtgtctggat 391  Q
    |||| ||||||||||||||||||||||||||||||||||||  ||||||| | ||||| ||||| |||||    
T  45613465 atatcgtcttatgattccactatttcctattgatgaggtgtgtcctgtttattgtaagacgtgtatggat 45613534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 496 - 547
Target Start/End: Complemental strand, 1085520 - 1085469
Alignment:
Q  496 ggtccgtttgcggagaaaccaacaacgacgatacaagcaagtaagagcttcc 547  Q
    ||||||||||||||||||||| ||||  ||||||||||||||||||||||||    
T  1085520 ggtccgtttgcggagaaaccagcaacagcgatacaagcaagtaagagcttcc 1085469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 503 - 547
Target Start/End: Complemental strand, 8128364 - 8128320
Alignment:
Q  503 ttgcggagaaaccaacaacgacgatacaagcaagtaagagcttcc 547  Q
    |||||||||||||| |||||||||||||| |||||||||||||||    
T  8128364 ttgcggagaaaccagcaacgacgatacaaacaagtaagagcttcc 8128320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 549 - 621
Target Start/End: Complemental strand, 26090813 - 26090741
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctaca 621  Q
    ||||||||||||||||||||| || | |||||||||| | ||||||||||||| |  |||||| |||||||||    
T  26090813 gtaacaccccgttacccaaaagcagtaaaatagcataaatacatcagagtaattccaaaacgggcatgctaca 26090741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 331 - 391
Target Start/End: Original strand, 28516919 - 28516979
Alignment:
Q  331 tatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtgtctggat 391  Q
    |||||||||||| |||  |||||||||||||| |||||||||||||||||| ||| |||||    
T  28516919 tatgattccacttttttttattgatgaggtgtgccctgtttgtcgtaaggcatgtttggat 28516979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 549 - 601
Target Start/End: Complemental strand, 40923832 - 40923780
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaat 601  Q
    ||||||||||||||||||||| |||| |||||||||| | |||||||||||||    
T  40923832 gtaacaccccgttacccaaaagcaataaaatagcataaatacatcagagtaat 40923780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 692 - 731
Target Start/End: Original strand, 49149988 - 49150027
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaa 731  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  49149988 atagcagcggaatagttttcagaatccatctcatcatgaa 49150027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 692 - 731
Target Start/End: Original strand, 49156678 - 49156717
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaa 731  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  49156678 atagcagcggaatagttttcagaatccatctcatcatgaa 49156717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 599
Target Start/End: Complemental strand, 11882304 - 11882254
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagta 599  Q
    |||||||||||||| || |||||||||||||| || |||||||||||||||    
T  11882304 gtaacaccccgttatcccaaaacaattaaataacaaataaacatcagagta 11882254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 321 - 387
Target Start/End: Complemental strand, 43857349 - 43857283
Alignment:
Q  321 gatattgtcttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtgtct 387  Q
    ||||| || ||||||||||||| ||| |||||||||||||||  | |||||||||||||| ||||||    
T  43857349 gatatcgtgttatgattccactgttttctattgatgaggtgtttcttgtttgtcgtaaggtgtgtct 43857283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 621
Target Start/End: Original strand, 15811438 - 15811511
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    ||||||||||||||||||||| ||||||||||  | |||  |||||||||||| || ||||||| |||||||||    
T  15811438 gtaacaccccgttacccaaaagcaattaaatacaaaatattcatcagagtaattcaccaaacgggcatgctaca 15811511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 405 - 450
Target Start/End: Original strand, 45754894 - 45754939
Alignment:
Q  405 cagtgatatcagagccccgttcgacgaagggtacgaccgaggcagc 450  Q
    ||||| ||||||||||||||||| ||||||||| ||||||||||||    
T  45754894 cagtggtatcagagccccgttcggcgaagggtatgaccgaggcagc 45754939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 281 - 353
Target Start/End: Complemental strand, 4175744 - 4175672
Alignment:
Q  281 ggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatgattccactatttcctattg 353  Q
    ||||| ||||||||||  | |||||| |||| ||||||| |||| || ||||||||||||||||| |||||||    
T  4175744 ggtcaacatatgtcacatgtggagtaccgtactatccttagatagtgccttatgattccactattccctattg 4175672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 549 - 601
Target Start/End: Complemental strand, 12404828 - 12404776
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaat 601  Q
    ||||||||||||||||||||  |||| |||||||||| | |||||||||||||    
T  12404828 gtaacaccccgttacccaaatgcaataaaatagcataaatacatcagagtaat 12404776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 549 - 622
Target Start/End: Original strand, 19438654 - 19438728
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctacac 622  Q
    |||||||||| |||||||||| ||||||||||  | |||  |||||||||||| || ||||||| ||||||||||    
T  19438654 gtaacaccccattacccaaaagcaattaaatacaaaatattcatcagagtaattcaccaaacgggcatgctacac 19438728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 254 - 359
Target Start/End: Complemental strand, 37258911 - 37258806
Alignment:
Q  254 cttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcga-tattgtcttatgattccactatttcctatt 352  Q
    ||||||| || ||| |||||||| |||| |||||||||||||| ||  || ||||||| ||| |||| | |||||||| ||||||||| ||||| ||||     
T  37258911 cttctagttatccctattgatggtttagatcagcatatgtcactagtagattatcgtagtat-cttcaagtattgtctcatgattccattattttctatc 37258813  T
Q  353 gatgagg 359  Q
    |||||||    
T  37258812 gatgagg 37258806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 11878511 - 11878552
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaaca 733  Q
    |||||||||||||||||||||||||||||  | |||||||||    
T  11878511 atagcagcggaatagttttcaaaatccataacctcatgaaca 11878552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 622
Target Start/End: Complemental strand, 17469124 - 17469051
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacac 622  Q
    ||||||||||||||||||||| || |||| ||  | | |||||||||||||| |  ||||||| ||||||||||    
T  17469124 gtaacaccccgttacccaaaatcatttaagtataacacaaacatcagagtaagcaccaaacgggcatgctacac 17469051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 622
Target Start/End: Original strand, 17584090 - 17584163
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacac 622  Q
    ||||||||||||||||||||| || |||| ||  | | |||||||||||||| |  ||||||| ||||||||||    
T  17584090 gtaacaccccgttacccaaaatcatttaagtataacacaaacatcagagtaagcaccaaacgggcatgctacac 17584163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 498 - 547
Target Start/End: Original strand, 30245385 - 30245434
Alignment:
Q  498 tccgtttgcggagaaaccaacaacgacgatacaagcaagtaagagcttcc 547  Q
    |||||||||| ||| | || ||||| ||||||||||||||||||||||||    
T  30245385 tccgtttgcgcagagagcagcaacggcgatacaagcaagtaagagcttcc 30245434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 30603543 - 30603502
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaaca 733  Q
    |||||||||||||||||||||||||||||  | |||||||||    
T  30603543 atagcagcggaatagttttcaaaatccataacctcatgaaca 30603502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 32626840 - 32626881
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaaca 733  Q
    |||||||||||||||||||||||||||||  | |||||||||    
T  32626840 atagcagcggaatagttttcaaaatccataacctcatgaaca 32626881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 503 - 548
Target Start/End: Original strand, 37345815 - 37345860
Alignment:
Q  503 ttgcggagaaaccaacaacgacgatacaagcaagtaagagcttcca 548  Q
    ||||||||||| || ||||| |||||||||||||||| ||||||||    
T  37345815 ttgcggagaaagcagcaacggcgatacaagcaagtaaaagcttcca 37345860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 253; Significance: 1e-140; HSPs: 54)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 39 - 391
Target Start/End: Complemental strand, 27337460 - 27337108
Alignment:
Q  39 attttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgt 138  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  27337460 attttgataatgctttggatgatcttcgcggaacgattccagattttgacgttagcagttttacttgcaaggacaccgtccctcctaaagcacaacatgt 27337361  T
Q  139 tttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtttgcaagcagta 238  Q
    |||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||| |||| |||||||||||| ||  |    
T  27337360 tttggcgagtgctctttttagtaaagttgttcaagatatggaagttaagtttgacatgaccactagacagaaggcagttttgggatgtttgcaaccacca 27337261  T
Q  239 cattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatgattc 338  Q
    ||| ||||| |||||||| |||||| ||||||||||||||||||| |||||||||||||||  ||||| |||| ||||||||||||| ||||||||||||    
T  27337260 catgctcaagattttcttttagctatcccaattgatgggttaggttagcatatgtcaccagttgagtaccgtactatccttcgatatcgtcttatgattc 27337161  T
Q  339 cactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtgtctggat 391  Q
    |||| ||||||||||||||||||| |||||||||||||||||| |||||||||    
T  27337160 cactttttcctattgatgaggtgtgccctgtttgtcgtaaggcatgtctggat 27337108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 230; E-Value: 1e-126
Query Start/End: Original strand, 39 - 391
Target Start/End: Complemental strand, 434060 - 433707
Alignment:
Q  39 attttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgt 138  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  434060 attttgataatgctttggatggtcttcacggaacgattccagattttgacgttagcagttttacttgcaaggacaccgtccctcctaaagcacaacatgt 433961  T
Q  139 ttt-ggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtttgcaagcagt 237  Q
    ||| || |||| ||||| |||||||| ||||||||||||| ||| |||||||||| ||||||||||| ||||||| | ||||||||||||||||||||      
T  433960 ttttggtgagtcctctttttagtaaagttgttcaagatatggaacttaagtttgaaatgaccactaggcagaaggtagttttaggatgtttgcaagcacc 433861  T
Q  238 acattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatgatt 337  Q
    |||| ||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||   |||||||| | ||||||||||||| |||||||||||    
T  433860 acatgctcaagattttcttctagctatcccaattgatgggttaggccagcatatgtcaccaattgagtatcggactatccttcgatatcgtcttatgatt 433761  T
Q  338 ccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtgtctggat 391  Q
    ||||| ||||||||||||||||||| | ||||||||||||||||||||||||||    
T  433760 ccactttttcctattgatgaggtgtgcactgtttgtcgtaaggcgtgtctggat 433707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 220; E-Value: 1e-120
Query Start/End: Original strand, 28 - 391
Target Start/End: Original strand, 15291352 - 15291715
Alignment:
Q  28 tatggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaa 127  Q
    |||||||||  |||| ||||||| ||||||||||||||| || || |||| ||||||||||||||| ||||||||  |||| ||||||||||||||||||    
T  15291352 tatggactcggatttcgataatgttttggatggtcttcgtggtacaattttagattttgacgttagcagttttactagcaaagacaccgtccctcctaaa 15291451  T
Q  128 gcacaacatgttttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtt 227  Q
    ||  ||||||||||| ||||||||||| ||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  15291452 gcggaacatgttttgacgagtgctctttttagtaaaagtgttcaagatatggaagttaagtttgacatgaccacgagacagaaggcaattttgggatgtt 15291551  T
Q  228 tgcaagcagtacattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattg 327  Q
    ||||||||| |||| |||   ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||| |    
T  15291552 tgcaagcagcacatgctcgggattttcttctagctatcccaattgatgggttaggtcagcatatgtcaccagtggagtatcgtactatccttagatatcg 15291651  T
Q  328 tcttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtgtctggat 391  Q
    || |||||||||||||||| |||||||||||||||  | ||||| |||||||||||||||||||    
T  15291652 tcgtatgattccactattttctattgatgaggtgtgtcatgtttatcgtaaggcgtgtctggat 15291715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 243 - 389
Target Start/End: Original strand, 25662861 - 25663007
Alignment:
Q  243 ctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatgattccact 342  Q
    ||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||| || |||| ||||||||||||| ||||||||||||||||    
T  25662861 ctcaagattttcttctagctatcccaattgatgggttgggtcagcatatgtcaccagtggaataccgtactatccttcgatatcgtcttatgattccact 25662960  T
Q  343 atttcctattgatgaggtgtaccctgtttgtcgtaaggcgtgtctgg 389  Q
    |||||||||||||||||||| || |||||||||||||||||||||||    
T  25662961 atttcctattgatgaggtgtgccttgtttgtcgtaaggcgtgtctgg 25663007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 405 - 547
Target Start/End: Complemental strand, 13416119 - 13415977
Alignment:
Q  405 cagtgatatcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgttt 504  Q
    ||||| |||||||| |||||||| |||||||||||||||||||| | ||  |||||||||| || ||||||||||||||||||||| | | |||||||||    
T  13416119 cagtggtatcagagtcccgttcgtcgaagggtacgaccgaggcaaccggtccgtttgcgcagaaagcagcaacggcggtgcaagcagtctcggtccgttt 13416020  T
Q  505 gcggagaaaccaacaacgacgatacaagcaagtaagagcttcc 547  Q
    |||||||||||| ||||  ||||||||||||||||||||||||    
T  13416019 gcggagaaaccatcaacagcgatacaagcaagtaagagcttcc 13415977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 216 - 383
Target Start/End: Original strand, 3113683 - 3113850
Alignment:
Q  216 ttttaggatgtttgcaagcagtacattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattat 315  Q
    ||||||| |||||| |||||| |||| ||||| ||||||| ||||||| ||| |||||||  ||||||||||||| ||||  || ||||||||||| |||    
T  3113683 ttttagggtgtttggaagcagcacatgctcaagattttctcctagctatcccgattgatgatttaggtcagcataggtcattagtggagtatcgtactat 3113782  T
Q  316 ccttcgatattgtcttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgt 383  Q
    |||| ||||||| |||||||||||||||| ||||||||||||||||| |||| ||||||  |||||||    
T  3113783 ccttagatattgccttatgattccactatctcctattgatgaggtgtgccctatttgtcacaaggcgt 3113850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 189 - 360
Target Start/End: Original strand, 32269283 - 32269454
Alignment:
Q  189 ttgacatgaccactagacagaaggcaattttaggatgtttgcaagcagtacattctcaaaattttcttctagctagcccaattgatgggttaggtcagca 288  Q
    ||||||||||||| |||  |||||||||||||| || |||||||   | |||| |||| ||||||||| |||||| ||  |||||||||||||||||| |    
T  32269283 ttgacatgaccacaagatcgaaggcaattttagaatatttgcaactggcacatgctcagaattttcttttagctatcctgattgatgggttaggtcagga 32269382  T
Q  289 tatgtcaccagcggagtatcgtattatccttcgatattgtcttatgattccactatttcctattgatgaggt 360  Q
    ||||| || || | |||||  || ||||||| |||||||||||||||||||||||||| |||||||||||||    
T  32269383 tatgttactagtgaagtattatactatccttggatattgtcttatgattccactattttctattgatgaggt 32269454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 28 - 177
Target Start/End: Original strand, 6821533 - 6821682
Alignment:
Q  28 tatggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaa 127  Q
    |||| |||| |||||||| |||  ||||||||||||||| || |||||| |||||||||||||||  ||||||||  |||| |||| |||||||||||||    
T  6821533 tatgtactcgaattttgacaatattttggatggtcttcgtggtacgattccagattttgacgttaacagttttactagcaaagacatcgtccctcctaaa 6821632  T
Q  128 gcacaacatgttttggcgagtgctcttcttagtaaaattgttcaagatat 177  Q
      | || |||||||||||||||||||| ||||||||| ||||||||||||    
T  6821633 atataaaatgttttggcgagtgctctttttagtaaaagtgttcaagatat 6821682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 405 - 545
Target Start/End: Complemental strand, 26075136 - 26074996
Alignment:
Q  405 cagtgatatcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgttt 504  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||| ||   ||||||||| || |||||||||||||||| || ||||| || ||||||    
T  26075136 cagtggtatcagagcctcgttcgacgaagggtacgaccgaggcagccggtctgtttgcgcagaaagcagcaacggcggtgc-agtaatgtcggcccgttt 26075038  T
Q  505 gcggagaaaccaacaacgacgatac-aagcaagtaagagctt 545  Q
    ||||||||  || ||||| |||||| ||||||||||||||||    
T  26075037 gcggagaactcagcaacggcgatacaaagcaagtaagagctt 26074996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 25852231 - 25852312
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| |||||||||| ||| || ||||||||||||||||||||||| ||||||||||||||||||    
T  25852231 gtaacaccccgttacccaaaagcaattaaataacatttatacatcagagtaatccacaaacgggcatgctacacgtcatttc 25852312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 37540872 - 37540791
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||   ||||| ||||||||||||||||||    
T  37540872 gtaacaccccgttacccaaaagcaattaaatagcatataaacatcagagtaatcccgcaacgggcatgctacacgtcatttc 37540791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 37548416 - 37548335
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||   ||||| ||||||||||||||||||    
T  37548416 gtaacaccccgttacccaaaagcaattaaatagcatataaacatcagagtaatcccgcaacgggcatgctacacgtcatttc 37548335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 412 - 548
Target Start/End: Original strand, 26074415 - 26074553
Alignment:
Q  412 atcagagccccg-ttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgtttgcggag 510  Q
    |||||||||||| || ||| ||||||||||||||| ||||| |   ||||||||| || ||||||||||||||||||||||||| |||| ||||||| ||    
T  26074415 atcagagccccggtttgacaaagggtacgaccgagacagctagtctgtttgcgcagaaagcagcaacggcggtgcaagcaatgtcggtctgtttgcgaag 26074514  T
Q  511 aaaccaacaacgacgatac-aagcaagtaagagcttcca 548  Q
    || ||||||| | | |||| |||||||||||||||||||    
T  26074515 aacccaacaatggcaatacaaagcaagtaagagcttcca 26074553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 25845596 - 25845677
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| |||||||||| ||| || ||||||||||||||||||||||| ||||||||||| ||||||    
T  25845596 gtaacaccccgttacccaaaagcaattaaataacatttatacatcagagtaatccacaaacgggcatgctacacgccatttc 25845677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 159 - 391
Target Start/End: Original strand, 6534023 - 6534255
Alignment:
Q  159 gtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtttgcaagcagtacattctcaaaattttcttct 258  Q
    |||||| |||| ||||||| ||||||||||||||||||| || |||| |||||    ||||| |||||||| |||| | ||||  ||||||     ||||    
T  6534023 gtaaaagtgtttaagatatggaagttaagtttgacatgatcattagatagaagatggttttatgatgtttgtaagcggcacatgttcaaaaaaaatttct 6534122  T
Q  259 agctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatgattccactatttcctattgatgag 358  Q
    ||||| ||  ||||||||||||||||||||||||||||||   || || | ||||||  || |||||||    ||||||| | |||||| ||||||||||    
T  6534123 agctatcctgattgatgggttaggtcagcatatgtcaccaatcgaataccatattatttttagatattgcaaaatgattctattatttcttattgatgag 6534222  T
Q  359 gtgtaccctgtttgtcgtaaggcgtgtctggat 391  Q
    ||||  | ||||||||||||||| |||||||||    
T  6534223 gtgtgtcatgtttgtcgtaaggcatgtctggat 6534255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 405 - 547
Target Start/End: Original strand, 623997 - 624140
Alignment:
Q  405 cagtgatatcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgttt 504  Q
    ||||| ||||||||||| |||||| |||||||||||||| |||||  ||  |||||||||| || | ||||||| |||| |||| | ||| |||||||||    
T  623997 cagtggtatcagagccctgttcgaagaagggtacgaccgtggcagtcggtccgtttgcgcagaaagaagcaacgacggtacaagtagtgtcggtccgttt 624096  T
Q  505 gcggagaaaccaacaacgacgatac-aagcaagtaagagcttcc 547  Q
    |||||||| ||| ||||| |||||| |||| |||||||||||||    
T  624097 gcggagaacccagcaacggcgatacaaagcgagtaagagcttcc 624140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 5583135 - 5583053
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagta-atccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||||||  ||||||||||| ||||||||||||||||||    
T  5583135 gtaacaccccgttacccaaaagcaattaaatagcaaatatacatcagagtagttccacaaacgggcatgctacacgtcatttc 5583053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 30780320 - 30780403
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccaca-aacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||| ||||  ||||||||||||||||||    
T  30780320 gtaacaccccgttacccaaaagcaattaaatagcatatatacatcagagtaattccacataacgagcatgctacacgtcatttc 30780403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 15460723 - 15460804
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagta-atccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| |||||||||||||  ||||||||||||||  ||||| ||||| ||||||||||||||||||    
T  15460723 gtaacaccccgttacccaaaagcaattaaatagcaattaaacatcagagtagttccac-aacgggcatgctacacgtcatttc 15460804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 18895852 - 18895771
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagta-atccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||||||  ||||| ||||| ||||||||||||||||||    
T  18895852 gtaacaccccgttacccaaaagcaattaaatagcaaatatacatcagagtagttccac-aacgggcatgctacacgtcatttc 18895771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 269 - 391
Target Start/End: Original strand, 26212153 - 26212275
Alignment:
Q  269 attgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatgattccactatttcctattgatgaggtgtaccctg 368  Q
    |||||||| |||||||| | | ||||||||| | ||||||||| |  |||| ||||| |  |||||||| || |||||||||||||||| ||||  ||||    
T  26212153 attgatggattaggtcatcttttgtcaccagtgaagtatcgtactgaccttagatatcgctttatgatttcattatttcctattgatgaagtgtgtcctg 26212252  T
Q  369 tttgtcgtaaggcgtgtctggat 391  Q
    |||||||||||||||| ||||||    
T  26212253 tttgtcgtaaggcgtgcctggat 26212275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 405 - 539
Target Start/End: Original strand, 35150523 - 35150662
Alignment:
Q  405 cagtgatatcagagccccgttcgacgaagggtacgaccgaggcagctggc---tc-gtttgcgcataaggcagcaacggcggtgcaagcaatgttggtcc 500  Q
    ||||| ||||||||||||||| ||||||||||| ||||||||||| | ||   || ||||||||| || ||||||||| |||  |||||| ||| |||||    
T  35150523 cagtggtatcagagccccgtttgacgaagggtatgaccgaggcaggtagccggtctgtttgcgcagaaagcagcaacgacggaacaagcagtgtcggtcc 35150622  T
Q  501 gtttgcggagaaaccaacaacgacgatac-aagcaagtaa 539  Q
    |||||||||||| ||| |||||  ||||| ||||||||||    
T  35150623 gtttgcggagaacccagcaacggtgatacaaagcaagtaa 35150662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 20339847 - 20339928
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| |||||||||| || |||  ||||||||||| ||||| ||||| ||||||||||||||||||    
T  20339847 gtaacaccccgttacccaaaagcaattaaataacaaatattcatcagagtaattccac-aacgggcatgctacacgtcatttc 20339928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 20346441 - 20346522
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| |||||||||| || |||  ||||||||||| ||||| ||||| ||||||||||||||||||    
T  20346441 gtaacaccccgttacccaaaagcaattaaataacaaatattcatcagagtaattccac-aacgggcatgctacacgtcatttc 20346522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 40011829 - 40011748
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagta-atccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||||||  |||||  |||| ||||||||||||||||||    
T  40011829 gtaacaccccgttacccaaaagcaattaaatagcaaatatacatcagagtagttccac-cacgggcatgctacacgtcatttc 40011748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 43028293 - 43028373
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||||||| ||||| ||||| ||||||||| ||||||||    
T  43028293 gtaacaccccgttacccaaaagcaattaaatagca-atatacatcagagtaattccac-aacgggcatgctacatgtcatttc 43028373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 621
Target Start/End: Original strand, 11994396 - 11994468
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctaca 621  Q
    ||||||||||||||||||||| |||| ||||| ||||||||||||||||||| ||||| ||||| |||||||||    
T  11994396 gtaacaccccgttacccaaaagcaataaaataacatataaacatcagagtaattccac-aacgggcatgctaca 11994468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 621
Target Start/End: Complemental strand, 14883201 - 14883128
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    |||||||||||||||||||||  ||| |||||||||||||||||||||||| | || ||||||| |||||||||    
T  14883201 gtaacaccccgttacccaaaaggaataaaatagcatataaacatcagagtattacaccaaacgggcatgctaca 14883128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 621
Target Start/End: Complemental strand, 14889878 - 14889805
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    |||||||||||||||||||||  ||| |||||||||||||||||||||||| | || ||||||| |||||||||    
T  14889878 gtaacaccccgttacccaaaaggaataaaatagcatataaacatcagagtattacaccaaacgggcatgctaca 14889805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 621
Target Start/End: Complemental strand, 24795901 - 24795828
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    |||||||||||||||||||||  ||| |||||||||||||||||||||||| | || ||||||| |||||||||    
T  24795901 gtaacaccccgttacccaaaaggaataaaatagcatataaacatcagagtattacaccaaacgggcatgctaca 24795828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 621
Target Start/End: Complemental strand, 24801268 - 24801195
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    |||||||||||||||||||||  ||| |||||||||||||||||||||||| | || ||||||| |||||||||    
T  24801268 gtaacaccccgttacccaaaaggaataaaatagcatataaacatcagagtattacaccaaacgggcatgctaca 24801195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 37540730 - 37540689
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaaca 733  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  37540730 atagcagcggaatagttttcaaaatccatctcatcatgaaca 37540689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 37548274 - 37548233
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaaca 733  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  37548274 atagcagcggaatagttttcaaaatccatctcatcatgaaca 37548233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 331 - 391
Target Start/End: Original strand, 13166542 - 13166602
Alignment:
Q  331 tatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtgtctggat 391  Q
    |||||||||||||||||  ||||||||||||| | |||||||| |||||||||||||||||    
T  13166542 tatgattccactatttctgattgatgaggtgtgctctgtttgttgtaaggcgtgtctggat 13166602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 501 - 547
Target Start/End: Original strand, 38427453 - 38427499
Alignment:
Q  501 gtttgcggagaaaccaacaacgacgatacaagcaagtaagagcttcc 547  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||||    
T  38427453 gtttgcgcagaaaccagcaacgacgatacaagcaagtaagagcttcc 38427499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 496 - 547
Target Start/End: Complemental strand, 3295284 - 3295233
Alignment:
Q  496 ggtccgtttgcggagaaaccaacaacgacgatacaagcaagtaagagcttcc 547  Q
    |||||||||||| ||||| || ||||| ||||||||||||||||||||||||    
T  3295284 ggtccgtttgcgcagaaagcagcaacggcgatacaagcaagtaagagcttcc 3295233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 411 - 450
Target Start/End: Complemental strand, 9498627 - 9498588
Alignment:
Q  411 tatcagagccccgttcgacgaagggtacgaccgaggcagc 450  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  9498627 tatcagagccccgttcgacaaagggtacgaccgaggcagc 9498588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 17939777 - 17939696
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    |||||||||||||||||| || || | |||||||||| | |||||||||||| | ||| ||||| ||||||||||||||||||    
T  17939777 gtaacaccccgttacccataagcagtaaaatagcataaatacatcagagtaatttcac-aacgggcatgctacacgtcatttc 17939696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 41879576 - 41879495
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagta-atccacaaacggtcatgctacacgtcatttc 630  Q
    |||||||||||||||||||||||||||| ||| || |||  ||||||||||  ||||| ||||| |||| |||||||||||||    
T  41879576 gtaacaccccgttacccaaaaacaattatataacaaatattcatcagagtagttccac-aacgggcatgttacacgtcatttc 41879495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 621
Target Start/End: Complemental strand, 7508900 - 7508828
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    |||||||||||||||||||||  ||| ||||||||||| |||||||||||| | || ||||||| |||||||||    
T  7508900 gtaacaccccgttacccaaaagaaataaaatagcatat-aacatcagagtattacaccaaacgggcatgctaca 7508828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 330 - 383
Target Start/End: Complemental strand, 38446642 - 38446589
Alignment:
Q  330 ttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgt 383  Q
    ||||||||||| ||||| | ||||||||||||| ||| ||||||||||||||||    
T  38446642 ttatgattccattattttccattgatgaggtgtgcccggtttgtcgtaaggcgt 38446589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 549 - 601
Target Start/End: Complemental strand, 14615799 - 14615747
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaat 601  Q
    ||||||||||||||||||||| || | |||||||||| | |||||||||||||    
T  14615799 gtaacaccccgttacccaaaagcagtaaaatagcataaatacatcagagtaat 14615747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 549 - 601
Target Start/End: Complemental strand, 22249082 - 22249030
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaat 601  Q
    ||||||||||||||||||||| || | |||||||||| | |||||||||||||    
T  22249082 gtaacaccccgttacccaaaagcagtaaaatagcataaatacatcagagtaat 22249030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 424 - 491
Target Start/End: Complemental strand, 3295312 - 3295245
Alignment:
Q  424 ttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaa 491  Q
    ||||| ||||||||||||||||||||  ||  |||||||||| || |||||||||||| | |||||||    
T  3295312 ttcgatgaagggtacgaccgaggcagtcggtccgtttgcgcagaaagcagcaacggcgatacaagcaa 3295245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 419 - 505
Target Start/End: Original strand, 15370274 - 15370363
Alignment:
Q  419 ccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaa---cggcggtgcaagcaatgttggtccgtttg 505  Q
    ||||||||||| ||||||||||||||||| || ||  |||||||||| || | |||||   ||| ||||||||||||||  |||||||||    
T  15370274 ccccgttcgacaaagggtacgaccgaggctgccggtccgtttgcgcagaaagtagcaaccgcggtggtgcaagcaatgtctgtccgtttg 15370363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 549 - 622
Target Start/End: Complemental strand, 5342535 - 5342461
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctacac 622  Q
    |||||||| |||||||||||| ||||||||||  | |||  |||||||||||| || ||||||| ||||||||||    
T  5342535 gtaacacctcgttacccaaaagcaattaaatacaaaatattcatcagagtaattcaccaaacgggcatgctacac 5342461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 549 - 599
Target Start/End: Original strand, 5453747 - 5453797
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagta 599  Q
    |||||||||||||||||||||  ||||||||| || |||| ||||||||||    
T  5453747 gtaacaccccgttacccaaaagtaattaaataacaaataatcatcagagta 5453797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 6224382 - 6224420
Alignment:
Q  411 tatcagagccccgttcgacgaagggtacgaccgaggcag 449  Q
    ||||||||||| ||||||||||||||||||| |||||||    
T  6224382 tatcagagcccggttcgacgaagggtacgactgaggcag 6224420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 19801181 - 19801100
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagt-aatccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| |||||||||| || |||  ||||||||| | ||||| |||||  ||||||||| |||||||    
T  19801181 gtaacaccccgttacccaaaagcaattaaataacaaatattcatcagagtgattccac-aacgggtatgctacacttcatttc 19801100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 350 - 388
Target Start/End: Complemental strand, 35310904 - 35310866
Alignment:
Q  350 attgatgaggtgtaccctgtttgtcgtaaggcgtgtctg 388  Q
    ||||||||||||| |||||||||| ||||||||||||||    
T  35310904 attgatgaggtgtgccctgtttgttgtaaggcgtgtctg 35310866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 5582993 - 5582952
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaaca 733  Q
    |||||||||||||||||||||||||||||  | |||||||||    
T  5582993 atagcagcggaatagttttcaaaatccataacctcatgaaca 5582952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 18895711 - 18895670
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaaca 733  Q
    |||||||||||||||||||||||||||||  | |||||||||    
T  18895711 atagcagcggaatagttttcaaaatccataacctcatgaaca 18895670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 30780463 - 30780504
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaaca 733  Q
    |||||||||||||||||||||||||||||  | |||||||||    
T  30780463 atagcagcggaatagttttcaaaatccataacctcatgaaca 30780504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 40011688 - 40011647
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaaca 733  Q
    |||||||||||||||||||||||||||||  | |||||||||    
T  40011688 atagcagcggaatagttttcaaaatccataacctcatgaaca 40011647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 224; Significance: 1e-123; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 28 - 391
Target Start/End: Complemental strand, 34305275 - 34304912
Alignment:
Q  28 tatggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaa 127  Q
    |||||||||| ||||||||||||||||||||||||||| |||  ||||| |||||||||||||||  |||||||| ||||||||||||||||||||||||    
T  34305275 tatggactcagattttgataatgctttggatggtcttcacggtgcgattccagattttgacgttaacagttttacttgcaaggacaccgtccctcctaaa 34305176  T
Q  128 gcacaacatgttttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtt 227  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| | |||||||||| | |||| |||||||    
T  34305175 gcacaacatgttttggcgagtgctctttttagtaaaattgttcaagatatggaagttaagtttgacatgaccgcaagacagaaggaagtttttggatgtt 34305076  T
Q  228 tgcaagcagtacattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattg 327  Q
    || |||||| |||| ||||| ||||| |||||| || |||||||||||||||| |||||||||||||||||| |||||| |||| |||||||||||| ||    
T  34305075 tggaagcagcacatgctcaagattttattctaggtatcccaattgatgggttatgtcagcatatgtcaccagtggagtaccgtactatccttcgatactg 34304976  T
Q  328 tcttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtgtctggat 391  Q
    ||||||||||||| |||||| |||||||||||| | ||||  |||||||||| | |||||||||    
T  34304975 tcttatgattccattatttcatattgatgaggtttgccctacttgtcgtaagacatgtctggat 34304912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 39 - 391
Target Start/End: Complemental strand, 32120694 - 32120344
Alignment:
Q  39 attttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgt 138  Q
    |||||||||||||||||||||||||||  || |||||| ||||||| |||||||| | |||||| ||| | |||| ||||||||||||||||||||||||    
T  32120694 attttgataatgctttggatggtcttcatggtacgattccagattt-gacgttagcaattttacttgcgaagacaacgtccctcctaaagcacaacatgt 32120596  T
Q  139 tttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtttgcaagcagta 238  Q
    |||||||||||||||| ||||  ||| |||||||||||| ||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||| || |    
T  32120595 tttggcgagtgctctttttaggtaaagtgttcaagatatggaagttaagtttgacatgaccacaagacagaagacaattataggatgtttgcaagtagga 32120496  T
Q  239 cattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatgattc 338  Q
    ||| ||||  |||||||||| | || | | |||||| |||||| |||||| |||| ||||  |||||  | ||  ||| ||  |||| | ||||||||||    
T  32120495 catgctcatgattttcttcttgttatctcgattgat-ggttagttcagcaaatgttaccaatggagtgccatacaatctttatatatcgccttatgattc 32120397  T
Q  339 cactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtgtctggat 391  Q
    || |||||||||||||| |||||| |||| |||||||||||| ||||||||||    
T  32120396 caatatttcctattgatcaggtgtgccctatttgtcgtaaggtgtgtctggat 32120344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 28 - 260
Target Start/End: Complemental strand, 10402506 - 10402275
Alignment:
Q  28 tatggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaa 127  Q
    |||||||||  |||||||||||||||||||||||||| |||  |||||| | |||||||||||||| |||||||| || ||||||| |||||||||||||    
T  10402506 tatggactcggattttgataatgctttggatggtctttgcgatacgattcctgattttgacgttagcagttttacttgtaaggacatcgtccctcctaaa 10402407  T
Q  128 gcacaacatgttttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtt 227  Q
    ||||||||||||||| ||||||||||| ||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||| | || |||||||    
T  10402406 gcacaacatgttttgacgagtgctctttttagt-aaatcgttcaagatatggaagttaagtttgacatgaccactagacagaaggcagtgtttggatgtt 10402308  T
Q  228 tgcaagcagtacattctcaaaattttcttctag 260  Q
    | ||||| |  ||| ||||| ||||||||||||    
T  10402307 ttcaagcggcgcatactcaagattttcttctag 10402275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 97 - 391
Target Start/End: Original strand, 29337483 - 29337778
Alignment:
Q  97 ttttacctgcaaggacaccgtccctcctaaagcacaacatgttttggcgagtgctcttcttagtaaaattgt-tcaagatatagaagttaagtttgacat 195  Q
    |||||| |||||||||| ||||| |||||||||||||||| |||||| |||||| ||| ||||||||||    ||||||||| |||||||||||||||||    
T  29337483 ttttacttgcaaggacatcgtccatcctaaagcacaacatattttggtgagtgccctttttagtaaaataaaatcaagatatggaagttaagtttgacat 29337582  T
Q  196 gaccactagacagaaggcaattttaggatgtttgcaagcagtacattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtca 295  Q
    |||| |||||||||||||  |||| || ||||||||||||| |||| ||||  ||||||||||||||| ||  ||||||||||||||||||||||| ||     
T  29337583 gacctctagacagaaggccgttttggggtgtttgcaagcagcacatgctcaggattttcttctagctatcctgattgatgggttaggtcagcatatttcg 29337682  T
Q  296 ccagcggagtatcgtattatccttcgatattgtcttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtgtctggat 391  Q
    | || | |||||| |||||||||| ||||| | ||||||||||| |||||| ||||| |||||| || || ||||| ||||||||| || ||||||    
T  29337683 caagtgaagtatcatattatccttagatatcgccttatgattcctctattttctattaatgaggcgtgccatgtttctcgtaaggcatgcctggat 29337778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 40 - 233
Target Start/End: Complemental strand, 32116400 - 32116208
Alignment:
Q  40 ttttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgtt 139  Q
    |||||||||||||||||||| |||||| || |||||| ||||||| |||||||| ||||||||  |||| |||| ||||| |||||||||||||||||||    
T  32116400 ttttgataatgctttggatgatcttcgtggtacgattccagattt-gacgttagcagttttactagcaaagacaacgtccttcctaaagcacaacatgtt 32116302  T
Q  140 ttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtttgcaag 233  Q
    ||| |||||| |||| ||||||||| |||||||||||| ||||||||||||||||  ||||| |||||||||  ||||||||| ||||||||||    
T  32116301 ttgacgagtgatctttttagtaaaagtgttcaagatatggaagttaagtttgacacaaccacgagacagaagataattttaggctgtttgcaag 32116208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 99 - 236
Target Start/End: Original strand, 45090 - 45227
Alignment:
Q  99 ttacctgcaaggacaccgtccctcctaaagcacaacatgttttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgac 198  Q
    ||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||  |||| ||||||||||||||||||||    
T  45090 ttaccagcaaagacaccgtccctcctaaagcacaacatgttttggcgagtgctctttttagtaaaagtgttcagaatatggaagttaagtttgacatgac 45189  T
Q  199 cactagacagaaggcaattttaggatgtttgcaagcag 236  Q
    |||  |||| |||| |||||| ||||||||||||||||    
T  45190 cacgggacaaaaggtaatttttggatgtttgcaagcag 45227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 115 - 387
Target Start/End: Original strand, 7199990 - 7200261
Alignment:
Q  115 cgtccctcctaaagcacaacatgttttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggca 214  Q
    ||||||||||||||||||||||||||||| || |||| || |||||||||||| ||||||||| ||||| |||||||| |||||||| |||||||| | |    
T  7199990 cgtccctcctaaagcacaacatgttttggtgaatgctttt-ttagtaaaattgatcaagatatggaagtgaagtttgatatgaccacaagacagaaagta 7200088  T
Q  215 attttaggatgtttgcaagcagtacattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtatta 314  Q
     || | || |||| ||||| || |||| ||||  ||||||||||||||| | ||||||||||||||| ||| ||||||||||  |  ||||| |  | ||    
T  7200089 gttcttgggtgttggcaagaagaacatgctcaggattttcttctagctatctcaattgatgggttagatcaacatatgtcacacgtagagtaccacacta 7200188  T
Q  315 tccttcgatattgtcttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtgtct 387  Q
    | ||||||||| |  | ||||||||| || ||  |||||||||| ||| ||||||||| | ||||||||||||    
T  7200189 ttcttcgatatcgcttaatgattccattactttttattgatgagatgtgccctgtttgccataaggcgtgtct 7200261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 269 - 391
Target Start/End: Original strand, 4206166 - 4206288
Alignment:
Q  269 attgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatgattccactatttcctattgatgaggtgtaccctg 368  Q
    ||||||||||||||||||||||||||||||| |||||| |||| ||||||| ||| | | |||| |||||||||||||||||||||||||| || |||||    
T  4206166 attgatgggttaggtcagcatatgtcaccagtggagtaccgtactatccttagatctcgccttacgattccactatttcctattgatgaggcgtgccctg 4206265  T
Q  369 tttgtcgtaaggcgtgtctggat 391  Q
    |||||||||||||||| ||||||    
T  4206266 tttgtcgtaaggcgtgcctggat 4206288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 405 - 547
Target Start/End: Complemental strand, 2578813 - 2578669
Alignment:
Q  405 cagtgatatcagagccccg-ttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaa-gcaatgttggtccgt 502  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||| ||  || ||| ||| || |||||||||||| | ||| ||| ||| |||| ||    
T  2578813 cagtggtatcagagccccggttcgacgaagggtacgaccgaggcagccggtccgcttgggcagaaagcagcaacggcgttacaaagcagtgtcggtctgt 2578714  T
Q  503 ttgcggagaaaccaacaacgacgatacaagcaagtaagagcttcc 547  Q
    |||||||||||||||||||| ||||||||||||||||||||||||    
T  2578713 ttgcggagaaaccaacaacggcgatacaagcaagtaagagcttcc 2578669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 269 - 380
Target Start/End: Original strand, 45239 - 45350
Alignment:
Q  269 attgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatgattccactatttcctattgatgaggtgtaccctg 368  Q
    ||||||||||||||||||||||||||| | | |||||||| || ||||||| |||||   |||||||||||| ||||||||||||||||||||| |||||    
T  45239 attgatgggttaggtcagcatatgtcatctgtggagtatcatactatccttagatatcaccttatgattccaatatttcctattgatgaggtgtgccctg 45338  T
Q  369 tttgtcgtaagg 380  Q
    ||||||||||||    
T  45339 tttgtcgtaagg 45350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 49 - 391
Target Start/End: Original strand, 8374647 - 8374989
Alignment:
Q  49 tgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctccta--aagcacaacatgttttggcga 146  Q
    |||||| |||||||||   || ||||||| | |||||||| |||| | ||||||  ||||||||||| |||||| ||  ||||||| ||| |||||  ||    
T  8374647 tgcttttgatggtctttatggtacgattttaaattttgactttagcaattttactagcaaggacaccatccctcatataaagcacatcatattttgatga 8374746  T
Q  147 gtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtttgcaagcagtacattctca 246  Q
      | |||| ||||||||| |||||| ||||| ||||| || ||||||||||||||  ||||||| | | ||||  | ||||||||| ||  |||| ||||    
T  8374747 acg-tctttttagtaaaagtgttcaggatatggaagtgaaatttgacatgaccacgcgacagaaagtagtttttcggtgtttgcaaacaacacatgctca 8374845  T
Q  247 aaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatgattccactattt 346  Q
    | ||||||||||||||| ||  |||||||||||| | || ||||||||||||   |||||||||| ||||||   |||| |  ||||||||||| || ||    
T  8374846 atattttcttctagctatccttattgatgggttaagccaacatatgtcaccaatagagtatcgtactatcctcatatatcgcattatgattccattactt 8374945  T
Q  347 cctattgatgaggtgtaccctgtttgtcgtaaggcgtgtctggat 391  Q
     ||||||||||||||| | |||||||   |||| |||||||||||    
T  8374946 tctattgatgaggtgt-cactgtttgcaataagacgtgtctggat 8374989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 1069915 - 1069997
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaat-ccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  1069915 gtaacaccccgttacccaaaagcaataaaatagcatataaacatcagagtaatcccacaaacgggcatgctacacgtcatttc 1069997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 7238186 - 7238104
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    |||||||||||||||||||||||||| | |||||||||| |||||||||||| ||||||||||| ||||||||||||||||||    
T  7238186 gtaacaccccgttacccaaaaacaataacatagcatatatacatcagagtaattccacaaacgggcatgctacacgtcatttc 7238104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 290 - 383
Target Start/End: Complemental strand, 12401842 - 12401749
Alignment:
Q  290 atgtcaccagcggagtatcgtattatccttcgatattgtcttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgt 383  Q
    |||||||||| |||||| |||||||| ||| ||||||||||||||||| |||||||| ||||||||||| ||| ||||||||| ||||||||||    
T  12401842 atgtcaccagtggagtaccgtattatgcttagatattgtcttatgattacactattttctattgatgagttgtgccctgtttgccgtaaggcgt 12401749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 21966469 - 21966389
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcatttc 630  Q
    |||||||||||||||||||||||||||||||| ||| || ||||||||||||||||| ||||| ||||||||||||||||||    
T  21966469 gtaacaccccgttacccaaaaacaattaaataacatttatacatcagagtaatccac-aacgggcatgctacacgtcatttc 21966389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 405 - 547
Target Start/End: Complemental strand, 2579470 - 2579326
Alignment:
Q  405 cagtgatatcagagccccg-ttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaa-gcaatgttggtccgt 502  Q
    ||||| ||||||||||||| ||||||||| ||||||||||||||||| ||  |  ||||||| || |||||||||||||| ||| ||  ||| |||| ||    
T  2579470 cagtggtatcagagccccggttcgacgaacggtacgaccgaggcagccggtccacttgcgcagaaagcagcaacggcggtacaaagcggtgtcggtctgt 2579371  T
Q  503 ttgcggagaaaccaacaacgacgatacaagcaagtaagagcttcc 547  Q
    |||| ||||||||| ||||| |||||||| |||||||||||||||    
T  2579370 ttgcagagaaaccagcaacggcgatacaaacaagtaagagcttcc 2579326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 405 - 547
Target Start/End: Original strand, 16107860 - 16108004
Alignment:
Q  405 cagtgatatcagagccccg-ttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaa-gcaatgttggtccgt 502  Q
    ||||| ||||||||||||| |||||||||||||| |||||||||||| ||  | |||| ||| || |||||||||||||| ||| ||| ||| |||| ||    
T  16107860 cagtggtatcagagccccggttcgacgaagggtatgaccgaggcagccggtccatttgtgcagaaagcagcaacggcggtacaaagcagtgtcggtctgt 16107959  T
Q  503 ttgcggagaaaccaacaacgacgatacaagcaagtaagagcttcc 547  Q
    ||||| |||||||| ||||| |||| |||| ||||||||||||||    
T  16107960 ttgcgaagaaaccagcaacggcgatgcaagaaagtaagagcttcc 16108004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 21965727 - 21965807
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcatttc 630  Q
    |||||||||||||||||||||||||||||||| ||| || ||| ||||||||||||| ||||| ||||||||||||||||||    
T  21965727 gtaacaccccgttacccaaaaacaattaaataacatttatacaacagagtaatccac-aacgggcatgctacacgtcatttc 21965807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 321 - 391
Target Start/End: Complemental strand, 32116174 - 32116104
Alignment:
Q  321 gatattgtcttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtgtctggat 391  Q
    |||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||| ||| ||||||    
T  32116174 gatattgtcttatgattcaactatttcctattgatgatgtgtgccctgtttgtcgtaaggtgtgcctggat 32116104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 549 - 621
Target Start/End: Original strand, 15298922 - 15298995
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctaca 621  Q
    ||||||||||||||||||||| |||| ||||| ||||||||||||||||||| ||||||||||| |||||||||    
T  15298922 gtaacaccccgttacccaaaagcaataaaataacatataaacatcagagtaattccacaaacgggcatgctaca 15298995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 549 - 621
Target Start/End: Original strand, 17308979 - 17309052
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctaca 621  Q
    ||||||||||||||||||||| |||| ||||| ||||||||||||||||||| ||||||||||| |||||||||    
T  17308979 gtaacaccccgttacccaaaagcaataaaataacatataaacatcagagtaattccacaaacgggcatgctaca 17309052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 30800277 - 30800197
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| |||||||||| ||  || ||||||||||||||||| ||||| ||||||||||||||||||    
T  30800277 gtaacaccccgttacccaaaagcaattaaataacaattatacatcagagtaatccac-aacgggcatgctacacgtcatttc 30800197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 405 - 545
Target Start/End: Complemental strand, 2579851 - 2579709
Alignment:
Q  405 cagtgatatcagagccccg-ttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgtt 503  Q
    ||||| ||||||||||||| ||| |||||||||||||||||||||||  | ||||||||||| || |||||||  ||||| |||  | ||  ||||| ||    
T  2579851 cagtggtatcagagccccggttccacgaagggtacgaccgaggcagccagttcgtttgcgcagaaagcagcaattgcggtacaataagtgacggtccatt 2579752  T
Q  504 tgcggagaaaccaacaacgacgatacaagc-aagtaagagctt 545  Q
    ||||||||||||||||||   ||||||| | ||||||||||||    
T  2579751 tgcggagaaaccaacaacagagatacaaacaaagtaagagctt 2579709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 16224514 - 16224433
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaat-ccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| ||||||||||||| ||| ||||||||||||| |||||| ||| |||||||||||| |||||    
T  16224514 gtaacaccccgttacccaaaagcaattaaatagcaaatatacatcagagtaattccacaa-cgggcatgctacacgtaatttc 16224433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 25316492 - 25316411
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagta-atccacaaacggtcatgctacacgtcatttc 630  Q
    |||||||||||||||||||||||||||||||| || ||| |||||||||||  ||||| ||||| ||||||||||||||||||    
T  25316492 gtaacaccccgttacccaaaaacaattaaatatcaaatatacatcagagtagttccac-aacgggcatgctacacgtcatttc 25316411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 26203986 - 26203905
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagta-atccacaaacggtcatgctacacgtcatttc 630  Q
    |||||||||||||||||||||||||||||||| || ||| |||||||||||  ||||| ||||| ||||||||||||||||||    
T  26203986 gtaacaccccgttacccaaaaacaattaaatatcaaatatacatcagagtagttccac-aacgggcatgctacacgtcatttc 26203905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 33874090 - 33874171
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagta-atccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||||||  ||||| ||||| ||||||||||||||||||    
T  33874090 gtaacaccccgttacccaaaagcaattaaatagcaaatatacatcagagtagttccac-aacgggcatgctacacgtcatttc 33874171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 621
Target Start/End: Original strand, 11582907 - 11582980
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    |||||||||||||||||||||  ||| |||||||||||||||||||||||| | || ||||||| |||||||||    
T  11582907 gtaacaccccgttacccaaaaggaataaaatagcatataaacatcagagtattacaccaaacgggcatgctaca 11582980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 621
Target Start/End: Complemental strand, 15332965 - 15332893
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctaca 621  Q
    ||||||||||||||||||||  |||| ||||| ||||||||||||||||||| ||||||||||| |||||||||    
T  15332965 gtaacaccccgttacccaaag-caataaaataacatataaacatcagagtaattccacaaacgggcatgctaca 15332893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 503 - 547
Target Start/End: Original strand, 33605875 - 33605919
Alignment:
Q  503 ttgcggagaaaccaacaacgacgatacaagcaagtaagagcttcc 547  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  33605875 ttgcggagaaaccagcaacgacgatacaagcaagtaagagcttcc 33605919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 169 - 352
Target Start/End: Original strand, 23910760 - 23910943
Alignment:
Q  169 tcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtttgcaagcagtacattctcaaaattttcttctagctagccca 268  Q
    |||| |||| ||| |||||||| ||| || ||| | | ||||| || ||| ||| ||||||||||||  ||||  | | |||||| ||||| ||| ||||    
T  23910760 tcaacatatggaatttaagtttcacacgatcacaatatagaagacagtttgagggtgtttgcaagcaacacatgtttagaatttttttctaactatccca 23910859  T
Q  269 attgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatgattccactatttcctatt 352  Q
    ||||||| ||||||| ||||||||||||||| ||| ||| ||| | || ||  |||| | ||||||||||||| |||| |||||    
T  23910860 attgatgagttaggttagcatatgtcaccagtggaatattgtactctctttaaatatcgccttatgattccacaattttctatt 23910943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 367
Target Start/End: Complemental strand, 22986602 - 22986358
Alignment:
Q  123 ctaaagcacaacatgttttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttagg 222  Q
    ||||||||||| ||||||||||| |||   || ||||||||| |||| ||||||   |||| |||||||||||| |||| ||| |||| ||| |||| ||    
T  22986602 ctaaagcacaatatgttttggcgtgtgtcttttttagtaaaagtgttaaagataagaaagtgaagtttgacatgtccacaagaaagaaagcagtttttgg 22986503  T
Q  223 atgtttgcaagcagtacattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcga 322  Q
     | | | ||||||  |||| ||||||||| | ||||||| | ||| || |||| ||||  ||||||||| ||| |    ||||||| ||  |||||  ||    
T  22986502 gtctcttcaagcaacacatgctcaaaattatattctagccatccctatggatgagttatatcagcatatttcatccctagagtatcatacaatcctcaga 22986403  T
Q  323 tattgtcttatgattccactatttcctattgatgaggtgtaccct 367  Q
    ||| | || ||||||||| ||  ||||||||||||||||| ||||    
T  22986402 tatcgcctcatgattccattacatcctattgatgaggtgtgccct 22986358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 367
Target Start/End: Original strand, 23801792 - 23802036
Alignment:
Q  123 ctaaagcacaacatgttttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttagg 222  Q
    ||||||||||| ||||||||||| |||   || ||||||||| |||| ||||||   |||| |||||||||||| |||| ||| |||| ||| |||| ||    
T  23801792 ctaaagcacaatatgttttggcgtgtgtcttttttagtaaaagtgttaaagataagaaagtgaagtttgacatgtccacaagaaagaaagcagtttttgg 23801891  T
Q  223 atgtttgcaagcagtacattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcga 322  Q
     | | | ||||||  |||| ||||||||| | ||||||| | ||| || |||| ||||  ||||||||| ||| |    ||||||| ||  |||||  ||    
T  23801892 gtctcttcaagcaacacatgctcaaaattatattctagccatccctatggatgagttatatcagcatatttcatccctagagtatcatacaatcctcaga 23801991  T
Q  323 tattgtcttatgattccactatttcctattgatgaggtgtaccct 367  Q
    ||| | || ||||||||| ||  ||||||||||||||||| ||||    
T  23801992 tatcgcctcatgattccattacatcctattgatgaggtgtgccct 23802036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 692 - 731
Target Start/End: Original strand, 25463276 - 25463315
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaa 731  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  25463276 atagcagcggaatagttttcagaatccatctcatcatgaa 25463315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 405 - 450
Target Start/End: Complemental strand, 2579088 - 2579042
Alignment:
Q  405 cagtgatatcagagccccg-ttcgacgaagggtacgaccgaggcagc 450  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||    
T  2579088 cagtgatatcagagtcccggttcgacgaagggtacgaccgaggcagc 2579042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 4106002 - 4106083
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    |||||||||||||| |||||| |||||||||| || |||   |||||||||| ||||| ||||| ||||||||||||||||||    
T  4106002 gtaacaccccgttatccaaaagcaattaaataacaaatatttatcagagtaattccac-aacggccatgctacacgtcatttc 4106083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 549 - 601
Target Start/End: Original strand, 25463135 - 25463187
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaat 601  Q
    ||||||||||||||||||||  |||| |||||||||| | |||||||||||||    
T  25463135 gtaacaccccgttacccaaatgcaataaaatagcataaatacatcagagtaat 25463187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 549 - 601
Target Start/End: Complemental strand, 34134782 - 34134730
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaat 601  Q
    ||||||||||||||||||||  |||| |||||||||| | |||||||||||||    
T  34134782 gtaacaccccgttacccaaatgcaataaaatagcataaatacatcagagtaat 34134730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 580
Target Start/End: Complemental strand, 8768946 - 8768915
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaata 580  Q
    ||||||||||||||||||||||||||||||||    
T  8768946 gtaacaccccgttacccaaaaacaattaaata 8768915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 580
Target Start/End: Original strand, 24561601 - 24561632
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaata 580  Q
    ||||||||||||||||||||||||||||||||    
T  24561601 gtaacaccccgttacccaaaaacaattaaata 24561632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 549 - 622
Target Start/End: Complemental strand, 10471555 - 10471481
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctacac 622  Q
    |||||||||||||||||||||  |||||||||  | |||  |||||||||||| || ||||||| ||||||||||    
T  10471555 gtaacaccccgttacccaaaagtaattaaatataaaatattcatcagagtaattcatcaaacgggcatgctacac 10471481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 549 - 622
Target Start/End: Complemental strand, 23022137 - 23022063
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctacac 622  Q
    |||||||||||||| || ||||||||||||||  | |||  |||||||||||| || ||||||| ||||||||||    
T  23022137 gtaacaccccgttatcccaaaacaattaaatataaaatattcatcagagtaattcaccaaacgggcatgctacac 23022063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 549 - 599
Target Start/End: Original strand, 24719983 - 24720033
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagta 599  Q
    ||||||||||| || || |||||||||||||| || |||||||||||||||    
T  24719983 gtaacaccccgctatcccaaaacaattaaataacaaataaacatcagagta 24720033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 598
Target Start/End: Complemental strand, 19097544 - 19097495
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagt 598  Q
    |||||||||||||||||||||  ||||||||| || ||| ||||||||||    
T  19097544 gtaacaccccgttacccaaaagtaattaaataacaaatatacatcagagt 19097495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 551 - 580
Target Start/End: Original strand, 19818296 - 19818325
Alignment:
Q  551 aacaccccgttacccaaaaacaattaaata 580  Q
    ||||||||||||||||||||||||||||||    
T  19818296 aacaccccgttacccaaaaacaattaaata 19818325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 224; Significance: 1e-123; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 29 - 391
Target Start/End: Original strand, 9684744 - 9685107
Alignment:
Q  29 atggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacct-gcaaggacaccgtccctcctaaa 127  Q
    |||||||| ||||||||||||||||||||||||||||| ||  ||||| |||||||||| ||||| | |||||| | |||| |||| |||||||| ||||    
T  9684744 atggactcgaattttgataatgctttggatggtcttcgtggtgcgattccagattttgatgttagcatttttacttagcaaagacatcgtccctcttaaa 9684843  T
Q  128 gcacaacatgttttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtt 227  Q
    |||||||||||||||| |||||||||| ||| ||||| |||||| ||||| ||||||||||||||||||||||| ||||||||||||||||| |||||||    
T  9684844 gcacaacatgttttggtgagtgctctttttaataaaagtgttcaggatatggaagttaagtttgacatgaccacgagacagaaggcaatttttggatgtt 9684943  T
Q  228 tgcaagcagtacattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattg 327  Q
    ||||||||| |||| ||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||| |    
T  9684944 tgcaagcagcacatactcaagattttcttctagctatccctattgatgggttaggtcagcatatgtcaccagtggagtatcgtactatccttagatatcg 9685043  T
Q  328 tcttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtgtctggat 391  Q
     |||| |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  9685044 ccttacgattccactatttcctattgatgaggcgtgccctgtttgtcgtaaggcgtgtctggat 9685107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 39 - 387
Target Start/End: Complemental strand, 28225762 - 28225419
Alignment:
Q  39 attttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgt 138  Q
    ||||||||||||||||||    ||||||||  |||||| |||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||| |    
T  28225762 attttgataatgctttgg----tcttcgcgatacgattccagattttgacgttaacagttttacttgcaaggacaccgtccctcctaaagcacaacatat 28225667  T
Q  139 tttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtttgcaagcagta 238  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||   ||| ||||||||||||| || |    
T  28225666 tttggcgagtgctctttttagtaaaattgttcaagatatggaagttatgtttgacatgaccactagacagaaggcgggttttggatgtttgcaagaagca 28225567  T
Q  239 cattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatgattc 338  Q
    ||| ||||| |||||||||||||||  |||||||||||||||| |||||||||||||||||||||||| |||| ||||| |||||||  |||||||||||    
T  28225566 catgctcaagattttcttctagcta-tccaattgatgggttagatcagcatatgtcaccagcggagtaccgtactatccgtcgatatcatcttatgattc 28225468  T
Q  339 cactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtgtct 387  Q
    || ||||| | ||||||||||||| || ||||||||||||| |||||||    
T  28225467 cattattttccattgatgaggtgtgccatgtttgtcgtaagacgtgtct 28225419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 29 - 391
Target Start/End: Original strand, 20142075 - 20142432
Alignment:
Q  29 atggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaag 128  Q
    ||||| || ||||||||||||||||| ||||||||| | || |||||| |||||||||| ||||| ||||||||  |||| ||||||||| |||||||||    
T  20142075 atggattcgaattttgataatgctttagatggtctttgtggtacgattccagattttgatgttagcagttttactagcaaagacaccgtctctcctaaag 20142174  T
Q  129 cacaacatgttttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgttt 228  Q
    |||||||||| ||||||||||||||| |||||||||  ||||| ||||| ||||||||||||||||||||||| |     ||||||||||| ||||||||    
T  20142175 cacaacatgtcttggcgagtgctctttttagtaaaagcgttcaggatatggaagttaagtttgacatgaccacaa-----aaggcaatttttggatgttt 20142269  T
Q  229 gcaagcagtacattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgt 328  Q
    |||||||| |||| ||||  ||||||||||||||| ||| |||||||||||| |||||||||||||| ||| ||||||| ||| ||||||| ||||| |     
T  20142270 gcaagcagcacatgctcaggattttcttctagctatcccgattgatgggttaagtcagcatatgtcaacagtggagtattgtactatccttagatatcgc 20142369  T
Q  329 cttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtgtctggat 391  Q
    |||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  20142370 cttatgattccactatttcctaatgatgaggtgtgccctgtttgtcgtaaggcgtgtctggat 20142432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 29 - 391
Target Start/End: Original strand, 41867238 - 41867600
Alignment:
Q  29 atggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaag 128  Q
    ||||||||  |||||||||||||||| ||||||||||   | |||||| || ||||||| ||||| | ||||||   ||| ||||| ||||||||||||     
T  41867238 atggactcggattttgataatgcttttgatggtcttcatagtacgattccatattttgatgttagcatttttactaacaaagacactgtccctcctaaaa 41867337  T
Q  129 cacaacatgttttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgttt 228  Q
    |||||||| ||||||||||||||||| ||||||||| ||| || ||||| ||||| |||||||||||||||||  | |||||||| ||||| | ||||||    
T  41867338 cacaacatattttggcgagtgctctttttagtaaaagtgtccaggatatggaagtcaagtttgacatgaccacggggcagaaggcgatttttgaatgttt 41867437  T
Q  229 gcaagcagtacattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgt 328  Q
    |||||||| |||| |||| |||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||| ||    
T  41867438 gcaagcagcacatgctcagaattttcttctagctatcccgattgatgggttaggtcagcatatgtcaccagtggagtatcgtactatccttagatatcgt 41867537  T
Q  329 cttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtgtctggat 391  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||| |||||||||||    
T  41867538 cttatgattccactatttcctattgatgaggtgtgctctgtttgtcgtaagtcgtgtctggat 41867600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 175; E-Value: 8e-94
Query Start/End: Original strand, 81 - 391
Target Start/End: Complemental strand, 17345363 - 17345053
Alignment:
Q  81 attttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgttttggcgagtgctcttcttagtaaaattgttcaagatataga 180  Q
    ||||||| ||||| | ||||||  |||| ||| ||||||||||||||||||||| |||||||| |||||||||| ||||||||| ||||||  |||| ||    
T  17345363 attttgatgttagcaattttactagcaaagacgccgtccctcctaaagcacaacttgttttggtgagtgctctttttagtaaaagtgttcagcatatgga 17345264  T
Q  181 agttaagtttgacatgaccactagacagaaggcaattttaggatgtttgcaagcagtacattctcaaaattttcttctagctagcccaattgatgggtta 280  Q
    ||||||||||||||||||||| ||||| ||| ||||||| ||||||||||||| |  |||| ||||| ||||||||||||||| ||||||||||||||||    
T  17345263 agttaagtttgacatgaccaccagacaaaagacaatttttggatgtttgcaagaaccacatgctcaagattttcttctagctatcccaattgatgggtta 17345164  T
Q  281 ggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaagg 380  Q
    |||| ||||||||||| || ||||||||||| ||||||| ||||| | ||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  17345163 ggtcggcatatgtcactagtggagtatcgtactatccttagatatcgccttatgaatccactatttcctattgatgaggtgtgccctgtttgtcgtaagg 17345064  T
Q  381 cgtgtctggat 391  Q
    |||| ||||||    
T  17345063 cgtgcctggat 17345053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 165; E-Value: 7e-88
Query Start/End: Original strand, 45 - 325
Target Start/End: Original strand, 18744364 - 18744644
Alignment:
Q  45 ataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgttttggc 144  Q
    |||||||||||||||||||||| || || ||| |||||||||| ||||| ||||||||  |||| ||||||||| |||||||||||||||||||||||||    
T  18744364 ataatgctttggatggtcttcgtggtacaattccagattttgatgttagcagttttactagcaaagacaccgtctctcctaaagcacaacatgttttggc 18744463  T
Q  145 gagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtttgcaagcagtacattct 244  Q
    |||||||||| ||||||||| |||||| ||||| |||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||  | || ||    
T  18744464 gagtgctctttttagtaaaagtgttcaggatatggaagttaagtttgagatgaccacgagacagaaggcaatttttggatgtttgcaagcaccaaatgct 18744563  T
Q  245 caaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatat 325  Q
    ||| | ||||||||||||| ||| ||||||||||||||| ||||||||||||||| ||||||||||| ||||||| |||||    
T  18744564 caagaatttcttctagctatcccgattgatgggttaggttagcatatgtcaccagtggagtatcgtactatccttagatat 18744644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 39 - 391
Target Start/End: Original strand, 19161168 - 19161517
Alignment:
Q  39 attttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgt 138  Q
    |||||||||||||||| ||| ||| ||| || | |||| |||||||||| ||||| ||||| ||  ||||  |||||||||||||||| |||||||||||    
T  19161168 attttgataatgcttttgattgtcctcgtggtatgattccagattttgatgttagcagttt-actagcaaaaacaccgtccctcctaatgcacaacatgt 19161266  T
Q  139 tttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtttgcaagcagta 238  Q
    || ||| ||||||||| ||  ||||| |||||||||||| ||||||||||||||||||| ||| ||||||||| ||| ||||||||||||||||||| ||    
T  19161267 tt-ggcaagtgctctttttcataaaaatgttcaagatatggaagttaagtttgacatgatcacgagacagaagacaactttaggatgtttgcaagcaata 19161365  T
Q  239 cattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatgattc 338  Q
     || ||||  ||||||||||||||| ||  |||||| |||||||||||||||||||| ||| ||||||||||| |||| || ||||| |||||||||||     
T  19161366 tatgctcaggattttcttctagctatcctgattgataggttaggtcagcatatgtcatcagtggagtatcgtactatcattagatatcgtcttatgattg 19161465  T
Q  339 cactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtgtctggat 391  Q
    |||||||||||||  ||||||| | | ||||||||||||||||| | ||||||    
T  19161466 cactatttcctatcaatgaggt-tgctctgtttgtcgtaaggcgcgcctggat 19161517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 179 - 391
Target Start/End: Complemental strand, 44687044 - 44686832
Alignment:
Q  179 gaagttaagtttgacatgaccactagacagaaggcaattttaggatgtttgcaagcagtacattctcaaaattttcttctagctagcccaattgatgggt 278  Q
    ||||||||||||||||| | ||||||| |||||||| |||| |||||||||||||||| |||| || || ||||||||||||||| | ||||||||||||    
T  44687044 gaagttaagtttgacataaacactagatagaaggcagtttttggatgtttgcaagcagcacatgcttaagattttcttctagctatctcaattgatgggt 44686945  T
Q  279 taggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaa 378  Q
    |||||||| |||||||||||  ||||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||  ||||||||||||||    
T  44686944 taggtcagtatatgtcaccaatggagtatcgtactatccttcgatatcgtcttatgattccactatgtcctattgatgaggtgtgtcctgtttgtcgtaa 44686845  T
Q  379 ggcgtgtctggat 391  Q
    |  ||||||||||    
T  44686844 gatgtgtctggat 44686832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 103; E-Value: 7e-51
Query Start/End: Original strand, 249 - 391
Target Start/End: Original strand, 4412616 - 4412758
Alignment:
Q  249 attttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatgattccactatttcc 348  Q
    ||||||||||||||| ||| ||||||| ||||||||||||||||||||||| ||||||||||| ||||||| ||||| ||||||||||||||||||||||    
T  4412616 attttcttctagctatcccgattgatgagttaggtcagcatatgtcaccagtggagtatcgtactatccttagatatcgtcttatgattccactatttcc 4412715  T
Q  349 tattgatgaggtgtaccctgtttgtcgtaaggcgtgtctggat 391  Q
    |||||||||||||| || |||| ||||||||||||||||||||    
T  4412716 tattgatgaggtgtgccttgttggtcgtaaggcgtgtctggat 4412758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 42 - 296
Target Start/End: Complemental strand, 8588849 - 8588596
Alignment:
Q  42 ttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgtttt 141  Q
    |||| |||| |||| || ||||||| |  ||||||||| | ||||||||||  |||||||| ||||||| || | ||||||| |||||||||||||||||    
T  8588849 ttgacaatgttttgtatagtcttcgtgatacgatttcaaagtttgacgttaacagttttacttgcaagggcaacatccctccaaaagcacaacatgtttt 8588750  T
Q  142 ggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtttgcaagcagtacat 241  Q
    ||||||||  ||| ||| ||||| |||||||||||| ||||| ||||||||||||||||||| ||| |||  | ||||||  | ||||||||| || |||    
T  8588749 ggcgagtgtcctttttaataaaagtgttcaagatatggaagtcaagtttgacatgaccactaaacataagatagttttagagtttttgcaagc-gtccat 8588651  T
Q  242 tctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcac 296  Q
     ||||  |||||||||||| || ||| |||||||| ||| || ||||||||||||    
T  8588650 gctcatgattttcttctagttatccctattgatggtttacgtaagcatatgtcac 8588596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 405 - 528
Target Start/End: Original strand, 40734064 - 40734187
Alignment:
Q  405 cagtgatatcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgttt 504  Q
    ||||| ||||||||||||||||| | |||||||||||||||||||| || ||||||||||| || ||||||||  |||| |||||| |||||||||||||    
T  40734064 cagtggtatcagagccccgttcgtcaaagggtacgaccgaggcagccggttcgtttgcgcagaaagcagcaacaacggtacaagcactgttggtccgttt 40734163  T
Q  505 gcggagaaaccaacaacgacgata 528  Q
    |||||||| |||||||||||||||    
T  40734164 gcggagaacccaacaacgacgata 40734187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 79 - 295
Target Start/End: Original strand, 34185439 - 34185653
Alignment:
Q  79 agattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgttttggcgagtgctcttcttagtaaaattgttcaagatata 178  Q
    |||||||||  ||||||||||||| |||||| |||||||||| ||||||| | ||||| |||||||||||||  || ||||||||| ||||||||||||     
T  34185439 agattttgaatttagtagttttacttgcaagaacaccgtcccacctaaagtagaacatattttggcgagtgccttttttagtaaaagtgttcaagatatg 34185538  T
Q  179 gaagttaagtttgacatgaccactagacagaaggcaattttaggatgtttgcaagcagtacattctcaaaattttcttctagctagcccaattgatgggt 278  Q
    ||||| |||||||| |||||||  | ||| || |||||||| || ||||| |||| || ||||  | || |||||||||||| || ||  ||||||||||    
T  34185539 gaagtgaagtttgagatgacca--aaacacaaagcaatttttgggtgtttacaagtagcacatgataaatattttcttctagatatccatattgatgggt 34185636  T
Q  279 taggtcagcatatgtca 295  Q
    |||| || |||||||||    
T  34185637 taggccaacatatgtca 34185653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 405 - 547
Target Start/End: Complemental strand, 36785923 - 36785780
Alignment:
Q  405 cagtgatatcagagccccgttcgacgaagggtacgaccgaggc-agctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgtt 503  Q
    ||||| |||||||||||||||||||||||||||||| |||||| ||  |   ||||||| ||||| |||||||||||||| |||||| | | | ||||||    
T  36785923 cagtggtatcagagccccgttcgacgaagggtacgatcgaggccagacgatccgtttgcacataaagcagcaacggcggtacaagcagtatcgatccgtt 36785824  T
Q  504 tgcggagaaaccaacaacgacgatacaagcaagtaagagcttcc 547  Q
    ||| ||||||||| |||||||||||||| |||||||||||||||    
T  36785823 tgcagagaaaccagcaacgacgatacaaccaagtaagagcttcc 36785780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 411 - 547
Target Start/End: Original strand, 3672888 - 3673025
Alignment:
Q  411 tatcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgtttgcggag 510  Q
    ||||||||||||||||||||||||||  || ||||||||| ||  |||||||||| || |||||  |||||||||||||| ||| |||||||||||||||    
T  3672888 tatcagagccccgttcgacgaagggtgtgatcgaggcagccggtccgtttgcgcagaaagcagcggcggcggtgcaagcagtgtcggtccgtttgcggag 3672987  T
Q  511 aaaccaacaacgacgatacaagc-aagtaagagcttcc 547  Q
    |||||| ||||||| ||||| || |||||| |||||||    
T  3672988 aaaccagcaacgacaatacatgcaaagtaaaagcttcc 3673025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 20964135 - 20964216
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||||| | ||||| ||||||||||||||||||    
T  20964135 gtaacaccccgttacccaaaagcaataaaatagcatataaacatcagagtaatcccccaacgggcatgctacacgtcatttc 20964216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 542 - 630
Target Start/End: Complemental strand, 30197406 - 30197318
Alignment:
Q  542 gcttccagtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcatttc 630  Q
    |||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||   ||||| ||||||||||||||||||    
T  30197406 gcttcctgtaacaccccgttacccaaaagcaataaaatagcatataaacatcagagtaatcccacaacgggcatgctacacgtcatttc 30197318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 4076723 - 4076805
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagta-atccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||||||  ||||||||||| ||||||||||||||||||    
T  4076723 gtaacaccccgttacccaaaagcaattaaatagcaaatatacatcagagtagttccacaaacgggcatgctacacgtcatttc 4076805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 1060962 - 1061043
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| |||| ||||| ||||||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  1060962 gtaacaccccgttacccaaaagcaataaaataacatataaacatcagagtaattccac-aacgggcatgctacacgtcatttc 1061043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 1066345 - 1066426
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| |||| ||||| ||||||||||||||||||| ||||| ||||| ||||||||||||||||||    
T  1066345 gtaacaccccgttacccaaaagcaataaaataacatataaacatcagagtaattccac-aacgggcatgctacacgtcatttc 1066426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 423 - 547
Target Start/End: Original strand, 7598427 - 7598552
Alignment:
Q  423 gttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgtt-ggtccgtttgcggagaaaccaacaac 521  Q
    ||||||||||||||||||| |||| ||| ||  |||| ||||| || ||||||||| |||| |||||| |||  |||| |||| ||||||||||||||||    
T  7598427 gttcgacgaagggtacgactgaggtagccggtccgtt-gcgcagaaagcagcaacgacggtacaagcagtgtcaggtctgtttacggagaaaccaacaac 7598525  T
Q  522 gacgatacaagcaagt-aagagcttcc 547  Q
    |||||||||||||||| ||||||||||    
T  7598526 gacgatacaagcaagtaaagagcttcc 7598552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 549 - 621
Target Start/End: Original strand, 28926763 - 28926836
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| | || ||||||| |||||||||    
T  28926763 gtaacaccccgttacccaaaagcaattaaatagcatataaacatcagagtatttcaccaaacgggcatgctaca 28926836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 549 - 621
Target Start/End: Original strand, 42552466 - 42552539
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| | || ||||||| |||||||||    
T  42552466 gtaacaccccgttacccaaaagcaattaaatagcatataaacatcagagtatttcaccaaacgggcatgctaca 42552539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 405 - 532
Target Start/End: Original strand, 6421565 - 6421690
Alignment:
Q  405 cagtgatatcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgttt 504  Q
    ||||| ||||||||| ||||||||| ||||||||||| |||| ||||| || ||||| ||| || ||||||||| | || |||||  ||| |||||||||    
T  6421565 cagtggtatcagagcaccgttcgacaaagggtacgactgagggagctgtct-gtttgtgcagaaagcagcaacgacagtacaagcg-tgtcggtccgttt 6421662  T
Q  505 gcggagaaaccaacaacgacgatacaag 532  Q
    |||||||||||| |||| ||||||||||    
T  6421663 gcggagaaaccagcaacaacgatacaag 6421690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 11361125 - 11361044
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagta-atccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||||||  ||||| ||||| ||||||||||||||||||    
T  11361125 gtaacaccccgttacccaaaagcaattaaatagcaaatatacatcagagtagttccac-aacgggcatgctacacgtcatttc 11361044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 549 - 621
Target Start/End: Complemental strand, 4072413 - 4072340
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||| | || ||||||| |||||||||    
T  4072413 gtaacaccccgttacccaaaagcaataaaatagcatataaacatcagagtatttcaccaaacgggcatgctaca 4072340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 549 - 621
Target Start/End: Complemental strand, 36985413 - 36985340
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||||||| | || ||||||| |||||||||    
T  36985413 gtaacaccccgttacccaaaagcaattaaatagcatacaaacatcagagtatttcaccaaacgggcatgctaca 36985340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 40584784 - 40584868
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagc--atataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||| |||||||||||||||| | |||||  ||||| |||||||||||| ||||||||||| ||||||||||||||||||    
T  40584784 gtaacaccctgttacccaaaaacaataacatagcatatatatacatcagagtaattccacaaacgggcatgctacacgtcatttc 40584868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 33355 - 33436
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| |||||||||| || |||  ||||||||||| ||||| ||||| ||||||||||||||||||    
T  33355 gtaacaccccgttacccaaaagcaattaaataacaaatattcatcagagtaattccac-aacgggcatgctacacgtcatttc 33436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 497 - 547
Target Start/End: Complemental strand, 38796487 - 38796437
Alignment:
Q  497 gtccgtttgcggagaaaccaacaacgacgatacaagcaagtaagagcttcc 547  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||||    
T  38796487 gtccgtttgcggagaaaccagcaacgacgatacaagcaagtaagatcttcc 38796437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 21121333 - 21121413
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||| ||||| |||||||||| ||| || |||||||||||||| ||  |||| ||||||||||||||||||    
T  21121333 gtaacaccccgttactcaaaagcaattaaataacatttatacatcagagtaatctac-gacgggcatgctacacgtcatttc 21121413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 550 - 630
Target Start/End: Original strand, 27728814 - 27728893
Alignment:
Q  550 taacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    |||||||||||||||||||| ||||||||||||| ||| |||||||||||| ||||| ||||| ||||||||| ||||||||    
T  27728814 taacaccccgttacccaaaagcaattaaatagca-atatacatcagagtaattccac-aacgggcatgctacatgtcatttc 27728893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 411 - 530
Target Start/End: Original strand, 23346422 - 23346541
Alignment:
Q  411 tatcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgtttgcggag 510  Q
    ||||||||||| ||| |||| ||||||||||||||| ||| ||   || |||||| || ||| ||| ||| || |||||| ||| |||| ||||||||||    
T  23346422 tatcagagcccggtttgacgtagggtacgaccgaggtagccggtctgtctgcgcagaaagcaacaatggcagtacaagcagtgtcggtctgtttgcggag 23346521  T
Q  511 aaaccaacaacgacgataca 530  Q
    |||||| ||||| |||||||    
T  23346522 aaaccagcaacggcgataca 23346541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 36593657 - 36593738
Alignment:
Q  549 gtaacaccccgttaccc-aaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||| |||||||||||||||||| ||| |||||||||||| ||||| ||||| ||||||||| ||||||||    
T  36593657 gtaacaccccgttaccccaaaaacaattaaatagca-atatacatcagagtaattccac-aacgggcatgctacatgtcatttc 36593738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 71 - 141
Target Start/End: Original strand, 33611937 - 33612006
Alignment:
Q  71 acgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgtttt 141  Q
    ||||||||||||||||||| | |||||||| | |||||||| ||| ||||||||||| |||||||||||||    
T  33611937 acgatttcagattttgacgct-gtagttttgcttgcaaggataccatccctcctaaaacacaacatgtttt 33612006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 549 - 601
Target Start/End: Original strand, 35584619 - 35584671
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaat 601  Q
    ||||||||||||||||||||| |||| |||||||||| | |||||||||||||    
T  35584619 gtaacaccccgttacccaaaagcaataaaatagcataaatacatcagagtaat 35584671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 456 - 539
Target Start/End: Original strand, 6421967 - 6422050
Alignment:
Q  456 cgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgtttgcggagaaaccaacaacgacgatacaagcaagtaa 539  Q
    |||||||||| | || ||||| |||||| |||| | ||| ||| ||||||||||||||||| ||||||| |||||||| |||||    
T  6421967 cgtttgcgcagagggtagcaatggcggtacaagtagtgtcggttcgtttgcggagaaaccagcaacgacaatacaagctagtaa 6422050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 692 - 731
Target Start/End: Complemental strand, 23832573 - 23832534
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaa 731  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  23832573 atagcagcggaatagttttcagaatccatctcatcatgaa 23832534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 497 - 548
Target Start/End: Complemental strand, 28531577 - 28531526
Alignment:
Q  497 gtccgtttgcggagaaaccaacaacgacgatacaagcaagtaagagcttcca 548  Q
    ||||||||  ||||||| ||||||||||||||||||||||||| ||||||||    
T  28531577 gtccgtttatggagaaagcaacaacgacgatacaagcaagtaatagcttcca 28531526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 500 - 547
Target Start/End: Complemental strand, 35580650 - 35580603
Alignment:
Q  500 cgtttgcggagaaaccaacaacgacgatacaagcaagtaagagcttcc 547  Q
    ||||||||||||||||||||||||| |||| ||||||||| |||||||    
T  35580650 cgtttgcggagaaaccaacaacgacaatacgagcaagtaaaagcttcc 35580603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 621
Target Start/End: Original strand, 21604072 - 21604145
Alignment:
Q  549 gtaacaccccgttacccaaaaa-caattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctaca 621  Q
    ||||||||||||||||| |||| |||| ||||| ||||||||||||||||||| ||||| ||||| |||||||||    
T  21604072 gtaacaccccgttaccccaaaagcaataaaataacatataaacatcagagtaattccac-aacgggcatgctaca 21604145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 29065779 - 29065860
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagta-atccacaaacggtcatgctacacgtcatttc 630  Q
    |||||||||||||||||||||||||||| ||| || |||  ||||||||||  ||||| ||||| |||| |||||||||||||    
T  29065779 gtaacaccccgttacccaaaaacaattatataacaaatattcatcagagtagttccac-aacgggcatgttacacgtcatttc 29065860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 329 - 391
Target Start/End: Original strand, 33612171 - 33612233
Alignment:
Q  329 cttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtgtctggat 391  Q
    ||||||||| ||||||||| ||||||||||||||  | |||||||||||| | ||||||||||    
T  33612171 cttatgatttcactatttcatattgatgaggtgtgtcatgtttgtcgtaaagtgtgtctggat 33612233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 405 - 459
Target Start/End: Original strand, 40733699 - 40733753
Alignment:
Q  405 cagtgatatcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtt 459  Q
    ||||| ||||| ||||||||||||| |||||||||||||||||||| || |||||    
T  40733699 cagtggtatcaaagccccgttcgacaaagggtacgaccgaggcagccggttcgtt 40733753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 44091915 - 44091834
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagta-atccacaaacggtcatgctacacgtcatttc 630  Q
    |||||||||||||||||||||||||||| ||| || |||  ||||||||||  ||||| ||||| |||| |||||||||||||    
T  44091915 gtaacaccccgttacccaaaaacaattatataacaaatattcatcagagtagttccac-aacgggcatgttacacgtcatttc 44091834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 503 - 547
Target Start/End: Original strand, 42514912 - 42514956
Alignment:
Q  503 ttgcggagaaaccaacaacgacgatacaagcaagtaagagcttcc 547  Q
    |||||||||||||| ||||  ||||||||||||||||||||||||    
T  42514912 ttgcggagaaaccagcaacagcgatacaagcaagtaagagcttcc 42514956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 580
Target Start/End: Complemental strand, 19655195 - 19655164
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaata 580  Q
    ||||||||||||||||||||||||||||||||    
T  19655195 gtaacaccccgttacccaaaaacaattaaata 19655164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 580
Target Start/End: Original strand, 22859689 - 22859720
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaata 580  Q
    ||||||||||||||||||||||||||||||||    
T  22859689 gtaacaccccgttacccaaaaacaattaaata 22859720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 411 - 450
Target Start/End: Complemental strand, 38796529 - 38796490
Alignment:
Q  411 tatcagagccccgttcgacgaagggtacgaccgaggcagc 450  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  38796529 tatcagagccccgtttgacgaagggtacgacctaggcagc 38796490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 2942260 - 2942341
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagta-atccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||| |||||||||||||||||| ||| || |||  ||||||||||  ||||| ||||| |||| |||||||||||||    
T  2942260 gtaacaccctgttacccaaaaacaattatataacaaatattcatcagagtagttccac-aacgggcatgttacacgtcatttc 2942341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 4076865 - 4076906
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaaca 733  Q
    |||||||||||||||||||||||||||||  | |||||||||    
T  4076865 atagcagcggaatagttttcaaaatccataacctcatgaaca 4076906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 622
Target Start/End: Complemental strand, 17593296 - 17593218
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatata----aacatcagagtaa-tccacaaacggtcatgctacac 622  Q
    |||||||||||||||||||||  ||||||||| || |||    ||||||||||||| |||||| |||| ||||||||||    
T  17593296 gtaacaccccgttacccaaaagtaattaaataacaaataattcaacatcagagtaattccacatacggacatgctacac 17593218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 20964275 - 20964316
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaaca 733  Q
    |||||||||||||||||||||||||||||  | |||||||||    
T  20964275 atagcagcggaatagttttcaaaatccataacctcatgaaca 20964316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 598
Target Start/End: Complemental strand, 24427665 - 24427616
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagt 598  Q
    |||||||||||||||||||||  ||||||||| || ||| ||||||||||    
T  24427665 gtaacaccccgttacccaaaagtaattaaataacaaatatacatcagagt 24427616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 598
Target Start/End: Original strand, 27036554 - 27036603
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagt 598  Q
    |||||||||||||||||||||  ||||||||| || ||| ||||||||||    
T  27036554 gtaacaccccgttacccaaaagtaattaaataacaaatatacatcagagt 27036603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 30197259 - 30197218
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaaca 733  Q
    |||||||||||||||||||||||||||||  | |||||||||    
T  30197259 atagcagcggaatagttttcaaaatccataacctcatgaaca 30197218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 411 - 463
Target Start/End: Complemental strand, 35580696 - 35580643
Alignment:
Q  411 tatcagagccccg-ttcgacgaagggtacgaccgaggcagctggctcgtttgcg 463  Q
    ||||||||||||| |||||||||||||| ||||||||| |  ||||||||||||    
T  35580696 tatcagagccccggttcgacgaagggtatgaccgaggctgtcggctcgtttgcg 35580643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 405 - 442
Target Start/End: Original strand, 42514829 - 42514866
Alignment:
Q  405 cagtgatatcagagccccgttcgacgaagggtacgacc 442  Q
    ||||| ||||||||||| ||||||||||||||||||||    
T  42514829 cagtggtatcagagccctgttcgacgaagggtacgacc 42514866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 44091773 - 44091732
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaaca 733  Q
    |||||||||||||||||||||||||||||  | |||||||||    
T  44091773 atagcagcggaatagttttcaaaatccataacctcatgaaca 44091732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 204; Significance: 1e-111; HSPs: 69)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 28 - 391
Target Start/End: Complemental strand, 24125805 - 24125443
Alignment:
Q  28 tatggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaa 127  Q
    ||||||||| |||||||| |||||||||||||||||||| || ||||||||||||||||| ||||||||||||||  |||| |||| || ||||||||||    
T  24125805 tatggactcgaattttgaaaatgctttggatggtcttcgtggtacgatttcagattttgatgttagtagttttactagcaaagacatcgcccctcctaaa 24125706  T
Q  128 gcacaacatgttttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtt 227  Q
    ||| |||||||||||| |||||||||| ||||||||| |||||||||||| |||||||||||||||||||| || ||| || ||||||| |||| |||||    
T  24125705 gcataacatgttttggtgagtgctctttttagtaaaagtgttcaagatatggaagttaagtttgacatgacaacgagataggaggcaatattagaatgtt 24125606  T
Q  228 tgcaagcagtacattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattg 327  Q
    ||||||||  |||| ||||  ||||||||||||||| ||| |||||||||||||||||| |||||||| ||| |||||| |||| |||||||  |||| |    
T  24125605 tgcaagcatcacatgctcaggattttcttctagctatcccgattgatgggttaggtcaggatatgtca-cagtggagtaccgtactatccttaaatatcg 24125507  T
Q  328 tcttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtgtctggat 391  Q
      ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  24125506 cattatgattccactatttcctattgatgaggtgtgccctgtttgtcgtaaggcgtgtctggat 24125443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 183; E-Value: 1e-98
Query Start/End: Original strand, 29 - 391
Target Start/End: Complemental strand, 37517866 - 37517504
Alignment:
Q  29 atggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaag 128  Q
    ||||||||  ||||||| |||||||||||||||||||| || ||||||| | ||||||| ||||| ||||||||  |||| |||||||||||||||||||    
T  37517866 atggactcggattttgaaaatgctttggatggtcttcgtggtacgatttaaaattttgatgttagcagttttactagcaatgacaccgtccctcctaaag 37517767  T
Q  129 cacaacatgttttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgttt 228  Q
    ||| ||||||||||||||||| |||| |||| |||| | |||| |||||  |||||||||||||||||||||| ||| |||||  |||||| ||||||||    
T  37517766 cacgacatgttttggcgagtgttctttttagaaaaagttttcatgatatgaaagttaagtttgacatgaccacgagatagaagataatttttggatgttt 37517667  T
Q  229 gcaagcagtacattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgt 328  Q
    |||||||| |||| ||||  |||||||||||  || ||| ||||||||||||||||| ||||||||||||| |||||||| || ||||||| ||||| |     
T  37517666 gcaagcagcacatgctcatgattttcttctaagtatcccgattgatgggttaggtcaacatatgtcaccagtggagtatcataatatccttagatatcgc 37517567  T
Q  329 cttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtgtctggat 391  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||||||| ||||| |||||    
T  37517566 cttatgattccactatttcctattgatgaggtgtgccctgtttatcgtaagacgtgtgtggat 37517504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 152; E-Value: 4e-80
Query Start/End: Original strand, 28 - 384
Target Start/End: Original strand, 25021131 - 25021489
Alignment:
Q  28 tatggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaa 127  Q
    |||||| || |||||||||||||||||||||| |||||| || ||||||  ||||||||||||||| || |||||  || ||||||  |||| |||||||    
T  25021131 tatggagtcgaattttgataatgctttggatgatcttcgtggtacgattctagattttgacgttagcagctttactggcgaggacattgtccttcctaaa 25021230  T
Q  128 gcacaacatgttttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtt 227  Q
    ||||||||||||||||||||||| ||| ||| ||||  |||||||||||| |||||||||||||| |||||||||||||| |||||   |||||| ||||    
T  25021231 gcacaacatgttttggcgagtgccctttttattaaaggtgttcaagatatggaagttaagtttgatatgaccactagacataaggcggatttagggtgtt 25021330  T
Q  228 tgcaagcagtacattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgta--ttatccttcgatat 325  Q
    ||||||||| |||| ||||| |||||||||||| || ||  |||||||||||| ||||||| |||||||||| | ||||| |||   ||||||| |||||    
T  25021331 tgcaagcagcacatgctcaagattttcttctagttatccatattgatgggttaagtcagcacatgtcaccagtgaagtatagtactatatccttagatat 25021430  T
Q  326 tgtcttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtg 384  Q
     | || |||||||||||||||| |||||||||||||| || | ||| ||||||||||||    
T  25021431 cgcctcatgattccactatttcatattgatgaggtgtgccatatttatcgtaaggcgtg 25021489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 113 - 381
Target Start/End: Complemental strand, 500920 - 500652
Alignment:
Q  113 accgtccctcctaaagcacaacatgttttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaagg 212  Q
    |||||||||  |||||||||||||||||||||||||||| || ||||||||| |||||||||||| |||||||||||| |||| | ||| | | |||||     
T  500920 accgtcccttttaaagcacaacatgttttggcgagtgctttttttagtaaaagtgttcaagatatggaagttaagtttaacataaacacgaaaaagaaga 500821  T
Q  213 caattttaggatgtttgcaagcagtacattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtat 312  Q
    |||||||||||| ||||||||||| | || ||||  ||||||||||||| | ||  ||||||| ||||||||||||||||||||||  |||||| ||||     
T  500820 caattttaggatatttgcaagcagcatatgctcatgattttcttctagcaatcctgattgatgagttaggtcagcatatgtcaccaatggagtaccgtac 500721  T
Q  313 tatccttcgatattgtcttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggc 381  Q
    ||||||| ||||||| |||| ||||||| |||||||||||||||||||||  ||||||||| |||||||    
T  500720 tatccttagatattgccttacgattccaatatttcctattgatgaggtgtgacctgtttgttgtaaggc 500652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 110; E-Value: 5e-55
Query Start/End: Original strand, 238 - 391
Target Start/End: Complemental strand, 39435235 - 39435082
Alignment:
Q  238 acattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatgatt 337  Q
    |||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||  ||||| |||| ||||||||||||| |||||||||||    
T  39435235 acatgctcaagattttcttctagctatcccaattgatgggttaggtcagcatatgtcactagttgagtaccgtactatccttcgatatcgtcttatgatt 39435136  T
Q  338 ccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtgtctggat 391  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  39435135 ccactttttcctattgatgaggtgtgccctgtttgtcgtaaggcgtgtctggat 39435082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 405 - 532
Target Start/End: Original strand, 147631 - 147759
Alignment:
Q  405 cagtgatatcagagccccg-ttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgtt 503  Q
    ||||||||||||||||||| |||||| |||||||||| |||||||||  |  |||||||||| || |||||||| ||||| |||||| ||| ||||||||    
T  147631 cagtgatatcagagccccggttcgacaaagggtacgatcgaggcagccagtccgtttgcgcagaaagcagcaacagcggtacaagcagtgtcggtccgtt 147730  T
Q  504 tgcggagaaaccaacaacgacgatacaag 532  Q
    |||||||||||||||||||||||||||||    
T  147731 tgcggagaaaccaacaacgacgatacaag 147759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 179 - 379
Target Start/End: Original strand, 42921610 - 42921810
Alignment:
Q  179 gaagttaagtttgacatgaccactagacagaaggcaattttaggatgtttgcaagcagtacattctcaaaattttcttctagctagcccaattgatgggt 278  Q
    |||||||  |||||||||||||||||| |||||| ||||||| | ||||||||||||  |||| || |  ||||||||||||||| | | | || |||||    
T  42921610 gaagttagatttgacatgaccactagatagaaggtaattttaaggtgtttgcaagcaacacatgcttaggattttcttctagctatctcgaatggtgggt 42921709  T
Q  279 taggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaa 378  Q
    ||||||||||||| |||  || |||||||| || |||  |||||||| |||||||||||||| |||||| |||||||||||||  ||  |||||||||||    
T  42921710 taggtcagcatatatcataagtggagtatcatactattattcgatatcgtcttatgattccattatttcttattgatgaggtgcgcctcgtttgtcgtaa 42921809  T
Q  379 g 379  Q
    |    
T  42921810 g 42921810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 413 - 543
Target Start/End: Complemental strand, 9483158 - 9483027
Alignment:
Q  413 tcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaa-gcaatgttggtccgtttgcggaga 511  Q
    |||||||||| || |||||||||||| ||||||||||  ||  |||||||||| || |||||||||||||| ||| ||| ||| ||||||||||||||||    
T  9483158 tcagagcccctttggacgaagggtacaaccgaggcagtcggtccgtttgcgcagaaagcagcaacggcggtacaaagcagtgtcggtccgtttgcggaga 9483059  T
Q  512 aaccaacaacgacgatacaagcaagtaagagc 543  Q
    ||||| ||||| ||||| ||||||||||||||    
T  9483058 aaccatcaacggcgatataagcaagtaagagc 9483027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 14765061 - 14765143
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaat-ccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  14765061 gtaacaccccgttacccaaaagcaataaaatagcatataaacatcagagtaatcccacaaacgggcatgctacacgtcatttc 14765143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 411 - 543
Target Start/End: Complemental strand, 9482997 - 9482864
Alignment:
Q  411 tatcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgc-aagcaatgttggtccgtttgcgga 509  Q
    |||||||||||||||||||||||||||||||||||||||  ||  ||||||| || ||   ||||||| |||| | ||||| ||| ||||||||||||||    
T  9482997 tatcagagccccgttcgacgaagggtacgaccgaggcagtcggtccgtttgcacagaaaaaagcaacgacggtacaaagcagtgtcggtccgtttgcgga 9482898  T
Q  510 gaaaccaacaacgacgatacaagcaagtaagagc 543  Q
    |||| || ||||| ||||||||||||||||||||    
T  9482897 gaaagcatcaacggcgatacaagcaagtaagagc 9482864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 52 - 174
Target Start/End: Original strand, 10950552 - 10950674
Alignment:
Q  52 tttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgttttggcgagtgct 151  Q
    |||| |||||||||| |  || |||||| ||||||||||||| | |||||| |||||||||||| | ||| |||||||||||||||||||| ||||||||    
T  10950552 tttgaatggtcttcgtgatacaatttcaaattttgacgttagcaattttacttgcaaggacaccattccttctaaagcacaacatgttttgacgagtgct 10950651  T
Q  152 cttcttagtaaaattgttcaaga 174  Q
    |||  |||||||| |||||||||    
T  10950652 ctttatagtaaaagtgttcaaga 10950674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 52 - 174
Target Start/End: Original strand, 10958557 - 10958679
Alignment:
Q  52 tttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgttttggcgagtgct 151  Q
    |||| |||||||||| |  || |||||| ||||||||||||| | |||||| |||||||||||| | ||| |||||||||||||||||||| ||||||||    
T  10958557 tttgaatggtcttcgtgatacaatttcaaattttgacgttagcaattttacttgcaaggacaccattccttctaaagcacaacatgttttgacgagtgct 10958656  T
Q  152 cttcttagtaaaattgttcaaga 174  Q
    |||  |||||||| |||||||||    
T  10958657 ctttatagtaaaagtgttcaaga 10958679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 405 - 548
Target Start/End: Original strand, 40518380 - 40518526
Alignment:
Q  405 cagtgatatcagagccccgttcgacgaagggtacgaccgaggcagct----ggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtcc 500  Q
    ||||| ||||| ||||||| ||||||||||||| |||||||||||      || || |||||||| |  | |||||||||||| ||| || ||| |||||    
T  40518380 cagtggtatcaaagccccgatcgacgaagggtatgaccgaggcaggcagtcggttcatttgcgcagagagtagcaacggcggtacaaaca-tgtcggtcc 40518478  T
Q  501 gtttgcggagaaaccaacaacgacgatacaagcaagtaagagcttcca 548  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  40518479 gtttgcggagaaaccagcaacgacgatacaagcaagtaagagcttcca 40518526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 249 - 360
Target Start/End: Original strand, 4006990 - 4007104
Alignment:
Q  249 attttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcg---tattatccttcgatattgtcttatgattccactatt 345  Q
    ||||||||||||||| ||  |||||||||||| ||||||||||||||  || |||| | ||   |||||||||| ||||| |||||||||||||||||||    
T  4006990 attttcttctagctatcctgattgatgggttaagtcagcatatgtcattagtggaggaccgccgtattatccttagatatcgtcttatgattccactatt 4007089  T
Q  346 tcctattgatgaggt 360  Q
    | |||||||||||||    
T  4007090 ttctattgatgaggt 4007104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 156 - 391
Target Start/End: Complemental strand, 10190194 - 10189958
Alignment:
Q  156 ttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacaga-aggcaattttaggatgtttgcaagcagtacattctcaaaattttc 254  Q
    |||| ||||||||| |||||||||||||||||||||||||||||| || ||    |  || ||||||| || ||||||| |  ||||  |||  ||||||    
T  10190194 ttaggaaaattgtttaagatatagaagttaagtttgacatgaccattaaacgtctaatcagttttagggtgcttgcaagtaacacatgttcatgattttc 10190095  T
Q  255 ttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatgattccactatttcctattga 354  Q
    ||||| ||| ||   |||||| ||||||| ||||||| ||| ||| ||||||||||| ||||    |||||||||||||||||| | |||||| ||||||    
T  10190094 ttctaactatccttgttgatgagttaggtaagcatatatcatcagtggagtatcgtaatatctgcagatattgtcttatgattctattatttcatattga 10189995  T
Q  355 tgaggtgtaccctgtttgtcgtaaggcgtgtctggat 391  Q
    |||  || |||| ||||| ||||||| ||| ||||||    
T  10189994 tgacatgcaccccgtttgccgtaaggtgtgcctggat 10189958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 168 - 391
Target Start/End: Complemental strand, 36006137 - 36005917
Alignment:
Q  168 ttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtttgcaagcagtacattctcaaaattttcttctagctagccc 267  Q
    |||||||||| ||||| ||||||||||||||||| ||| |||| |||||| | |   |||||||||||  |||| ||||| |  || ||| ||||| |||    
T  36006137 ttcaagatatggaagtgaagtttgacatgaccacaagatagaaagcaattctggagggtttgcaagcaacacatgctcaaga--ttattcaagctatccc 36006040  T
Q  268 aattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatgattccactatttcctattgatgaggtgtaccct 367  Q
    |||| ||||||||||||| |||||||||||||  ||||||  || ||||||   |||| |  ||||||||| | ||||||||||||||||| |||  | |    
T  36006039 aatttatgggttaggtcatcatatgtcaccagtagagtattatactatcctcaaatatggctttatgattctattatttcctattgatgagatgt-gcat 36005941  T
Q  368 gtttgtcgtaaggcgtgtctggat 391  Q
     ||||||||||||| | |||||||    
T  36005940 ttttgtcgtaaggcatatctggat 36005917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 80 - 362
Target Start/End: Complemental strand, 140027 - 139747
Alignment:
Q  80 gattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgttttggcgagtgctcttcttagtaaaattgttcaagatatag 179  Q
    ||||||||| |||  ||||||||  |||| ||||  || |||||||| |||||||||||||||| |||||  ||| |||||| || |||| | ||| | |    
T  140027 gattttgactttatcagttttactagcaatgacattgttcctcctaa-gcacaacatgttttggtgagtgtcctttttagtagaaatgttaaggatgtgg 139929  T
Q  180 aagttaagtttgacatgaccactagacagaaggcaattttaggatgtttgcaagcagtacattctcaaaattttcttctagctagcccaattgatgggtt 279  Q
    |||| ||||||||||||||||| ||| |||| | | |||| || ||||||| | ||  |||| |||||||||||||| || ||| ||  |||||||| ||    
T  139928 aagtgaagtttgacatgaccacgagatagaaagtagtttt-ggttgtttgcgaacaaaacatgctcaaaattttcttttaactatccatattgatggctt 139830  T
Q  280 aggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatgattccactatttcctattgatgaggtgt 362  Q
    | | || ||||| ||| |||  ||||||| || ||||||   || |||||| |||||| || ||||||||||||| |||||||    
T  139829 atgccaacatatatcatcagtagagtatcatactatcctcgtattttgtctcatgatttcattatttcctattgacgaggtgt 139747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 411 - 547
Target Start/End: Complemental strand, 8919117 - 8918981
Alignment:
Q  411 tatcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgtttgcggag 510  Q
    |||||||| ||||||| |||||||||| |||||||| ||| ||  || ||| |||||| | ||||||| |||| ||  || ||| |||||||||||| ||    
T  8919117 tatcagagtcccgttcaacgaagggtatgaccgaggtagccggtccgattgtgcataaagtagcaacgacggtacagacagtgtcggtccgtttgcgaag 8919018  T
Q  511 aaaccaacaacgacgatacaagcaagtaagagcttcc 547  Q
    ||| || ||||| |||||||||||||| |||||||||    
T  8919017 aaatcagcaacggcgatacaagcaagttagagcttcc 8918981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 105 - 384
Target Start/End: Complemental strand, 40840254 - 40839978
Alignment:
Q  105 gcaaggacaccgtccctcctaaagcacaacatgttttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactag 204  Q
    |||||||||||||||||| ||||||  ||||||||||| ||||||   || ||||||||| |||||| ||||| ||| | || ||| | ||| |||| ||    
T  40840254 gcaaggacaccgtccctcttaaagccgaacatgttttgacgagtgtcatttttagtaaaagtgttcaggatatggaactaaaatttaatatgcccacaag 40840155  T
Q  205 acagaaggcaattttaggatgtttgcaagcagtacattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggag 304  Q
    ||| ||  ||||||| || ||||||||||||| ||||   ||   | || ||||||||| ||| |||||||||||| | || ||||||||||||   |||    
T  40840154 acacaaaacaatttttgggtgtttgcaagcagcacat--gcatgttatttttctagctatccctattgatgggttaagccaacatatgtcaccactagag 40840057  T
Q  305 --tatcgtattatccttcgatattgtcttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtg 384  Q
      |||| |||||||||  ||||| | |  ||||||||| ||||||||||| ||||||| || ||| |||| |||||||||||    
T  40840056 tatatcctattatcctcagatatcgac--atgattccattatttcctatttatgaggttta-cctatttgccgtaaggcgtg 40839978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 33799230 - 33799149
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagta-atccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||||||  ||||| ||||| ||||||||||||||||||    
T  33799230 gtaacaccccgttacccaaaagcaattaaatagcaaatatacatcagagtagttccac-aacgggcatgctacacgtcatttc 33799149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 412 - 547
Target Start/End: Original strand, 45122816 - 45122946
Alignment:
Q  412 atcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgtttgcggaga 511  Q
    |||||||||  ||||||||||||||||||||||||||||  |  |||||||||| || ||| |||||| ||| ||     |||  ||||||| || ||||    
T  45122816 atcagagcctagttcgacgaagggtacgaccgaggcagccagtccgtttgcgcagaaagcaacaacggtggtacag----tgtctgtccgtt-gcagaga 45122910  T
Q  512 aaccaacaacgacgatacaagcaagtaagagcttcc 547  Q
    ||||| ||||||||||||||||||||||||||||||    
T  45122911 aaccagcaacgacgatacaagcaagtaagagcttcc 45122946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 27910413 - 27910332
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| |||| |||||| || ||| ||||||||||||||   ||||| ||||||||||||||||||    
T  27910413 gtaacaccccgttacccaaaagcaataaaatagtatgtaatcatcagagtaatcccacaacgggcatgctacacgtcatttc 27910332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 27956832 - 27956751
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| |||| |||||| || ||| ||||||||||||||   ||||| ||||||||||||||||||    
T  27956832 gtaacaccccgttacccaaaagcaataaaatagtatgtaatcatcagagtaatcccacaacgggcatgctacacgtcatttc 27956751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 405 - 544
Target Start/End: Original strand, 9608933 - 9609072
Alignment:
Q  405 cagtgatatcagagccccg-ttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgtt 503  Q
    ||||| |||||| |||||| |||||| |||||||||||||||| | | ||  ||||||||||||| |||||||||||||| |||||  ||| ||||||||    
T  9608933 cagtggtatcagtgccccggttcgacaaagggtacgaccgaggaaaccggtccgtttgcgcataaagcagcaacggcggtacaagc-gtgtcggtccgtt 9609031  T
Q  504 tgcggagaaaccaacaacgacgatacaagcaagtaagagct 544  Q
    |||| ||||| || ||    || ||||||||||||||||||    
T  9609032 tgcgcagaaagcagcattagcggtacaagcaagtaagagct 9609072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 4979633 - 4979714
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    |||||||| |||||||||||| |||| |||||| ||||| |||||||||||| ||||| ||||| ||||||||||||||||||    
T  4979633 gtaacacctcgttacccaaaagcaataaaatagaatatatacatcagagtaattccac-aacgggcatgctacacgtcatttc 4979714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 10949559 - 10949478
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaat-ccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||||||||||||||| | |||  |||||||||||| |||||| ||| ||||| ||||||||||||    
T  10949559 gtaacaccccgttacccaaaaacaattaaatagtaaatattcatcagagtaattccacaa-cgggcatgccacacgtcatttc 10949478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 10957564 - 10957483
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaat-ccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||||||||||||||| | |||  |||||||||||| |||||| ||| ||||| ||||||||||||    
T  10957564 gtaacaccccgttacccaaaaacaattaaatagtaaatattcatcagagtaattccacaa-cgggcatgccacacgtcatttc 10957483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 14737649 - 14737568
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaat-ccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| ||||||||||||| |||  ||||||| |||| |||||| ||| ||||||||||||||||||    
T  14737649 gtaacaccccgttacccaaaagcaattaaatagcaaatattcatcagattaattccacaa-cgggcatgctacacgtcatttc 14737568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 16888125 - 16888044
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| |||||||| |||| ||| |||||||||||| |||||  |||| ||||||||||||||||||    
T  16888125 gtaacaccccgttacccaaaagcaattaaaaagcaaatatacatcagagtaattccac-cacgggcatgctacacgtcatttc 16888044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 621
Target Start/End: Complemental strand, 13362781 - 13362709
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctaca 621  Q
    ||||||||||||||||||||| |||| ||||| ||||||||||||||||||| ||||| ||||| |||||||||    
T  13362781 gtaacaccccgttacccaaaagcaataaaataacatataaacatcagagtaattccac-aacgggcatgctaca 13362709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 598
Target Start/End: Original strand, 14562914 - 14562963
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagt 598  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  14562914 gtaacaccccgttacccaaaagcaataaaatagcatataaacatcagagt 14562963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 621
Target Start/End: Original strand, 28980000 - 28980073
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    |||||||||||||||||||||  ||| |||||||||||||||||||||||| | || ||||||| |||||||||    
T  28980000 gtaacaccccgttacccaaaagtaataaaatagcatataaacatcagagtatttcaccaaacgggcatgctaca 28980073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 621
Target Start/End: Original strand, 28985220 - 28985293
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    |||||||||||||||||||||  ||| |||||||||||||||||||||||| | || ||||||| |||||||||    
T  28985220 gtaacaccccgttacccaaaagtaataaaatagcatataaacatcagagtatttcaccaaacgggcatgctaca 28985293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 621
Target Start/End: Complemental strand, 36801264 - 36801192
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctaca 621  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||||||||| |||||| |||| |||||||||    
T  36801264 gtaacaccccgttacccaaag-caataaaatagcatataaacatcagagtaattccacatacgggcatgctaca 36801192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 621
Target Start/End: Original strand, 37879145 - 37879218
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    |||||||||||||||||||||  ||| |||||||||||||||||||||||| | || ||||||| |||||||||    
T  37879145 gtaacaccccgttacccaaaagaaataaaatagcatataaacatcagagtattacaccaaacgggcatgctaca 37879218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 41242984 - 41242904
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| |||||||||| ||| |  ||||||||||||||||| ||||  |||||||||| |||||||    
T  41242984 gtaacaccccgttacccaaaagcaattaaataacatttttacatcagagtaatccac-aacgtgcatgctacacttcatttc 41242904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 23225572 - 23225491
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| |||||||||| ||  || |||||||||||| ||||| ||||| ||||||||| ||||||||    
T  23225572 gtaacaccccgttacccaaaagcaattaaataacaattatacatcagagtaattccac-aacgggcatgctacatgtcatttc 23225491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 23746694 - 23746776
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| | |||||||| || |||  ||||||||||| |||||| |||| |||||| |||||||||||    
T  23746694 gtaacaccccgttacccaaaagcgattaaataacaaatattcatcagagtaattccacatacgggcatgctgcacgtcatttc 23746776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 26486846 - 26486765
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaat-ccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| |||||||||| || |||  | |||||||||| |||||| ||| ||||||||||||||||||    
T  26486846 gtaacaccccgttacccaaaagcaattaaataacaaatattcgtcagagtaattccacaa-cgggcatgctacacgtcatttc 26486765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 35540352 - 35540432
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||||||| |||||  |||| ||||||||| ||||||||    
T  35540352 gtaacaccccgttacccaaaagcaattaaatagca-atatacatcagagtaattccac-gacggacatgctacatgtcatttc 35540432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 37235047 - 37235128
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagta-atccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||| ||||||||||| ||||||||||||| ||| |||||||||||  ||||| ||||| |||||||||||| |||||    
T  37235047 gtaacaccctgttacccaaaagcaattaaatagcaaatatacatcagagtagttccac-aacgggcatgctacacgttatttc 37235128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 411 - 449
Target Start/End: Original strand, 40518258 - 40518296
Alignment:
Q  411 tatcagagccccgttcgacgaagggtacgaccgaggcag 449  Q
    |||||||||||||||||||||||||||||||||||||||    
T  40518258 tatcagagccccgttcgacgaagggtacgaccgaggcag 40518296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 549 - 621
Target Start/End: Original strand, 213300 - 213373
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    ||||||||||||||||||||| |||| ||| | |||||||||||||||||| | || ||||||| |||||||||    
T  213300 gtaacaccccgttacccaaaagcaataaaacaacatataaacatcagagtatttcaccaaacgggcatgctaca 213373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 549 - 621
Target Start/End: Complemental strand, 238954 - 238881
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    ||||||||||||||||||||| |||| ||| | |||||||||||||||||| | || ||||||| |||||||||    
T  238954 gtaacaccccgttacccaaaagcaataaaacaacatataaacatcagagtatttcaccaaacgggcatgctaca 238881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 549 - 621
Target Start/End: Original strand, 726923 - 726996
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    ||||||||||||||||||||| |||| ||| | |||||||||||||||||| | || ||||||| |||||||||    
T  726923 gtaacaccccgttacccaaaagcaataaaacaacatataaacatcagagtatttcaccaaacgggcatgctaca 726996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 549 - 621
Target Start/End: Complemental strand, 752692 - 752619
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    ||||||||||||||||||||| |||| ||| | |||||||||||||||||| | || ||||||| |||||||||    
T  752692 gtaacaccccgttacccaaaagcaataaaacaacatataaacatcagagtatttcaccaaacgggcatgctaca 752619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 549 - 621
Target Start/End: Complemental strand, 792309 - 792236
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    ||||||||||||||||||||| |||| ||| | |||||||||||||||||| | || ||||||| |||||||||    
T  792309 gtaacaccccgttacccaaaagcaataaaacaacatataaacatcagagtatttcaccaaacgggcatgctaca 792236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 549 - 621
Target Start/End: Original strand, 799424 - 799497
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    ||||||||||||||||||||| |||| ||| | |||||||||||||||||| | || ||||||| |||||||||    
T  799424 gtaacaccccgttacccaaaagcaataaaacaacatataaacatcagagtatttcaccaaacgggcatgctaca 799497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 549 - 621
Target Start/End: Original strand, 850817 - 850890
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    ||||||||||||||||||||| |||| ||| | |||||||||||||||||| | || ||||||| |||||||||    
T  850817 gtaacaccccgttacccaaaagcaataaaacaacatataaacatcagagtatttcaccaaacgggcatgctaca 850890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 405 - 450
Target Start/End: Original strand, 34835055 - 34835100
Alignment:
Q  405 cagtgatatcagagccccgttcgacgaagggtacgaccgaggcagc 450  Q
    ||||| ||||||||||| ||||||||||||||||||||||||||||    
T  34835055 cagtggtatcagagcccggttcgacgaagggtacgaccgaggcagc 34835100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 408 - 508
Target Start/End: Complemental strand, 37544466 - 37544366
Alignment:
Q  408 tgatatcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgtttgcg 507  Q
    ||||||||||||||| |||| |||||| | ||| |||| |||| || ||||||| |||||| ||||||||| |||||||| |  ||| | ||||||||||    
T  37544466 tgatatcagagcccccttcgtcgaaggatgcgatcgagacagccggttcgtttgtgcataaagcagcaacgacggtgcaatcggtgtcgttccgtttgcg 37544367  T
Q  508 g 508  Q
    |    
T  37544366 g 37544366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 405 - 490
Target Start/End: Complemental strand, 1014222 - 1014138
Alignment:
Q  405 cagtgatatcagagccccg-ttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagca 490  Q
    ||||| ||||||||||||| |||||||||||||||||| |||||||| || ||| ||||||| || || ||||||||||| ||||||    
T  1014222 cagtggtatcagagccccggttcgacgaagggtacgactgaggcagccgg-tcg-ttgcgcagaaagccgcaacggcggtacaagca 1014138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 405 - 463
Target Start/End: Complemental strand, 18371971 - 18371913
Alignment:
Q  405 cagtgatatcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcg 463  Q
    ||||| ||||||||||  ||||||| |||||||||||||||||||| || |||||||||    
T  18371971 cagtggtatcagagcctggttcgacaaagggtacgaccgaggcagccggttcgtttgcg 18371913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 496 - 547
Target Start/End: Complemental strand, 3038196 - 3038144
Alignment:
Q  496 ggtccgtttgcggagaaaccaacaacgacgatacaa-gcaagtaagagcttcc 547  Q
    |||||||||| |||||||||| ||||| |||||||| ||||||||||||||||    
T  3038196 ggtccgtttgaggagaaaccagcaacggcgatacaaagcaagtaagagcttcc 3038144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 507 - 547
Target Start/End: Complemental strand, 9482856 - 9482816
Alignment:
Q  507 ggagaaaccaacaacgacgatacaagcaagtaagagcttcc 547  Q
    |||||||||| ||||| ||||||||||||||||||||||||    
T  9482856 ggagaaaccagcaacggcgatacaagcaagtaagagcttcc 9482816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 549 - 601
Target Start/End: Original strand, 35033149 - 35033201
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaat 601  Q
    ||||||||||||||||||||| || | |||||||||| | |||||||||||||    
T  35033149 gtaacaccccgttacccaaaagcagtaaaatagcataaatacatcagagtaat 35033201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 39 - 102
Target Start/End: Complemental strand, 4700407 - 4700344
Alignment:
Q  39 attttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttac 102  Q
    ||||||| |||||||||||||||||||| || ||||||  ||||||||||  ||| ||||||||    
T  4700407 attttgacaatgctttggatggtcttcgtggtacgattctagattttgactgtagcagttttac 4700344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 580
Target Start/End: Original strand, 6587430 - 6587461
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaata 580  Q
    ||||||||||||||||||||||||||||||||    
T  6587430 gtaacaccccgttacccaaaaacaattaaata 6587461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 580
Target Start/End: Complemental strand, 20984632 - 20984601
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaata 580  Q
    ||||||||||||||||||||||||||||||||    
T  20984632 gtaacaccccgttacccaaaaacaattaaata 20984601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 600
Target Start/End: Complemental strand, 21986363 - 21986312
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa 600  Q
    ||||||||||||||||||||| ||||||||||  | |||| |||||||||||    
T  21986363 gtaacaccccgttacccaaaagcaattaaatattaaataatcatcagagtaa 21986312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 600
Target Start/End: Complemental strand, 22003571 - 22003520
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa 600  Q
    ||||||||||||||||||||| ||||||||||  | |||| |||||||||||    
T  22003571 gtaacaccccgttacccaaaagcaattaaatattaaataatcatcagagtaa 22003520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 580
Target Start/End: Complemental strand, 31419525 - 31419494
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaata 580  Q
    ||||||||||||||||||||||||||||||||    
T  31419525 gtaacaccccgttacccaaaaacaattaaata 31419494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 549 - 622
Target Start/End: Complemental strand, 14417382 - 14417308
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctacac 622  Q
    |||||||||||||||||||||  |||||||||  | |||  |||||||||||| || ||||||| ||||||||||    
T  14417382 gtaacaccccgttacccaaaagtaattaaatataaaatattcatcagagtaattcaccaaacgggcatgctacac 14417308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 629
Target Start/End: Complemental strand, 4521599 - 4521519
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcattt 629  Q
    |||||||||||||||||| || || | ||||| |||| | |||||||||||| | ||| ||||| |||||||||||||||||    
T  4521599 gtaacaccccgttacccataagcagtaaaataacataaatacatcagagtaatttcac-aacgggcatgctacacgtcattt 4521519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 277 - 346
Target Start/End: Original strand, 10556106 - 10556175
Alignment:
Q  277 gttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatgattccactattt 346  Q
    |||||||||  |||||||||| | | | |||| ||||||||||  |||| ||||||||||||||||||||    
T  10556106 gttaggtcaatatatgtcaccggtgaattatcatattatccttaaatatcgtcttatgattccactattt 10556175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 16887984 - 16887943
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaaca 733  Q
    |||||||||||||||||||||||||||||  | |||||||||    
T  16887984 atagcagcggaatagttttcaaaatccataacctcatgaaca 16887943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 598
Target Start/End: Original strand, 23116518 - 23116567
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagt 598  Q
    |||||||||||||||||||||  ||||||||| || ||| ||||||||||    
T  23116518 gtaacaccccgttacccaaaagtaattaaataacaaatatacatcagagt 23116567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 33799089 - 33799048
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaaca 733  Q
    |||||||||||||||||||||||||||||  | |||||||||    
T  33799089 atagcagcggaatagttttcaaaatccataacctcatgaaca 33799048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 532
Target Start/End: Original strand, 45122505 - 45122562
Alignment:
Q  475 aacggcggtgcaagcaatgttggtccgtttgcggagaaaccaacaacgacgatacaag 532  Q
    |||| |||| |||||| ||| ||||||||||||||| ||||||||||  |||||||||    
T  45122505 aacgacggtacaagcagtgtcggtccgtttgcggaggaaccaacaacatcgatacaag 45122562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 188; Significance: 1e-101; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 39 - 378
Target Start/End: Original strand, 28040468 - 28040806
Alignment:
Q  39 attttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgt 138  Q
    |||||||||||||||||||||||||||| || ||||||  ||||||||| ||||| ||||||||  |||| |||||| ||||||||||||||||||||||    
T  28040468 attttgataatgctttggatggtcttcgtggtacgattctagattttgatgttagcagttttactagcaatgacaccatccctcctaaagcacaacatgt 28040567  T
Q  139 tttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtttgcaagcagta 238  Q
    ||| |||||||||||| ||||||||| ||| || ||||| ||| ||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |    
T  28040568 ttttgcgagtgctctttttagtaaaaatgt-caggatatggaaattaagtttgacatgaccacgagacagaaggcaatttttggatgtttgcaagcagaa 28040666  T
Q  239 cattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatgattc 338  Q
    ||| ||||| ||||||||||||||| ||| |||||| |||||||||| ||||||||||||| |||||||| || ||||||| ||||| | ||||||||||    
T  28040667 catgctcaagattttcttctagctatcccgattgattggttaggtcaacatatgtcaccagtggagtatcatactatccttagatatcgccttatgattc 28040766  T
Q  339 cactatttcctattgatgaggtgtaccctgtttgtcgtaa 378  Q
    || ||||||||| ||||| ||||| ||||||||| |||||    
T  28040767 cattatttcctaatgatgtggtgtgccctgtttgccgtaa 28040806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 29 - 362
Target Start/End: Complemental strand, 19036203 - 19035871
Alignment:
Q  29 atggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaag 128  Q
    ||||||||| |||||||||||||||||||| ||||||| ||   |||| |||||||| | ||||| ||||||||  | || ||| ||||||||| |||||    
T  19036203 atggactcagattttgataatgctttggattgtcttcgtggtgggattccagatttttatgttagcagttttactagaaaagac-ccgtccctcataaag 19036105  T
Q  129 cacaacatgttttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgttt 228  Q
    |||||||||||||||||||||||||| ||||||||| |||||| ||||| ||||||||||||||||||||||| ||||| ||||||||||| |||||| |    
T  19036104 cacaacatgttttggcgagtgctctttttagtaaaagtgttcaggatatggaagttaagtttgacatgaccacgagacaaaaggcaatttttggatgtct 19036005  T
Q  229 gcaagcagtacattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgt 328  Q
    |||||||| |||| |||   ||||||||||||||| ||| ||||||| ||||||||| ||||||||||||| |||||||| || ||||||| ||||| |     
T  19036004 gcaagcagcacatgctcgggattttcttctagctatcccgattgatgagttaggtcaacatatgtcaccagtggagtatcatactatccttagatatcgc 19035905  T
Q  329 cttatgattccactatttcctattgatgaggtgt 362  Q
    |||||||||||||||| |||| ||||||||||||    
T  19035904 cttatgattccactatatccttttgatgaggtgt 19035871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 39 - 391
Target Start/End: Original strand, 7794258 - 7794607
Alignment:
Q  39 attttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgt 138  Q
    |||||||||||| |||||||||||||| ||| || ||| ||||||||||| ||||||||||||| |||||||| | ||||||||||||| || ||||| |    
T  7794258 attttgataatgttttggatggtcttcacggtaccattccagattttgac-ttagtagttttacttgcaaggatatcgtccctcctaaaacataacatat 7794356  T
Q  139 tttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtttgcaagcagta 238  Q
    ||| |||||||||| | |||||||||  |||||| |||| |||||||||||| ||||||||||||||||||||  | |||||||  |||   || ||  |    
T  7794357 tttagcgagtgctcgttttagtaaaa--gttcaaaatatggaagttaagttttacatgaccactagacagaagatagttttagggcgttcaaaaacatca 7794454  T
Q  239 cattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatgattc 338  Q
    ||| ||||  |||||||| |||||| ||  ||||||||||||||||| ||||| ||||||| |||||| | |  ||||||| ||||| | ||||||||||    
T  7794455 catgctcatgattttcttatagctatccttattgatgggttaggtcaacatatatcaccagtggagtaccatgctatcctttgatatcgccttatgattc 7794554  T
Q  339 cactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtgtctggat 391  Q
    || |||||| ||||||| ||||| ||| |||||||||||||||||||||||||    
T  7794555 cattatttcatattgataaggtgcaccttgtttgtcgtaaggcgtgtctggat 7794607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 28 - 384
Target Start/End: Complemental strand, 37201031 - 37200677
Alignment:
Q  28 tatggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaa 127  Q
    ||||||||| | |||| ||||||||||||||| |||||| || |||||| || |||||||| ||||||||||||| |||||| ||  ||||| |||||||    
T  37201031 tatggactcgattttttataatgctttggatgatcttcgtggcacgattccaaattttgacattagtagttttacttgcaagcacgtcgtccatcctaaa 37200932  T
Q  128 gcacaacatgttttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtt 227  Q
    || |||  |||||||| |||||  ||| |||| |||| |||||||||||| |||||||| ||||||||||||||||  || ||| |||||||| | ||||    
T  37200931 gcgcaa--tgttttggtgagtgtcctttttaggaaaagtgttcaagatatggaagttaaatttgacatgaccactacgcataagacaattttaaggtgtt 37200834  T
Q  228 tgcaagcagtacattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattg 327  Q
    |||||| || |||| ||||  |||||||| || ||| ||  || ||||||||||||||||||||||||| || |||||||| || ||||||| ||||| |    
T  37200833 tgcaagtagcacatgctcatcattttcttttaactatccatatggatgggttaggtcagcatatgtcactagtggagtatcatactatccttagatatcg 37200734  T
Q  328 tcttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtg 384  Q
     ||||| |||||||||||||||||||||||||||| ||||  |||| ||||| ||||    
T  37200733 ccttataattccactatttcctattgatgaggtgtgccctacttgttgtaagacgtg 37200677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 107 - 357
Target Start/End: Complemental strand, 38732282 - 38732032
Alignment:
Q  107 aaggacaccgtccctcctaaagcacaacatgttttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagac 206  Q
    ||||||| ||||| ||||||||||||||| |||||| ||| ||  | | ||||||||| |||||||||||| ||||||||||||||||||| ||||||||    
T  38732282 aaggacaacgtccttcctaaagcacaacaagttttgacgattgtccattttagtaaaagtgttcaagatatggaagttaagtttgacatgatcactagac 38732183  T
Q  207 agaaggcaattttaggatgtttgcaagcagtacattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagta 306  Q
    ||||| || |||||||||||||| |||||  | |||||||  |||||||| |||||| ||  || ||||||||  |||||||||||||| ||| ||||||    
T  38732182 agaagtcacttttaggatgtttgaaagcaacaaattctcatgattttcttgtagctatcctgatggatgggttgtgtcagcatatgtcatcagtggagta 38732083  T
Q  307 tcgtattatccttcgatattgtcttatgattccactatttcctattgatga 357  Q
     |||| ||||||| ||||| | ||||||||||||||||||||| |||||||    
T  38732082 ccgtactatccttagatatcgccttatgattccactatttcctgttgatga 38732032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 198 - 391
Target Start/End: Complemental strand, 34645173 - 34644981
Alignment:
Q  198 ccactagacagaaggcaattttaggatgtttgcaagcagtacattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcacc 297  Q
    |||||||||||||| |||||| ||||||||||| || || | ||  |||| ||||| ||||||||| || ||||||||||| || ||||||||||||||     
T  34645173 ccactagacagaagacaatttaaggatgtttgcgagtagcatatgttcaagatttt-ttctagctatcctaattgatgggtaagatcagcatatgtcact 34645075  T
Q  298 agcggagtatcgtattatccttcgatattgtcttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtgtctggat 391  Q
    || | |||| |||||||||||||||||| |||||||||||||||||||| ||| |||||||| || ||||||||||| ||||||||||||||||    
T  34645074 agtgaagtaccgtattatccttcgatatcgtcttatgattccactattttctagtgatgaggagtgccctgtttgtcataaggcgtgtctggat 34644981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 405 - 545
Target Start/End: Original strand, 34649619 - 34649759
Alignment:
Q  405 cagtgatatcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgttt 504  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||| ||  |||||||||| || ||| ||||| |||| |||||| | | ||||| |||    
T  34649619 cagtggtatcagagccccgttcgatgaagggtacgaccgaggcagccggtccgtttgcgcagaaagcaacaacgacggtacaagcagtttcggtccattt 34649718  T
Q  505 gcggagaaaccaacaacgacgatacaagcaagtaagagctt 545  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  34649719 gcggagaaaccagcaacgacgatacaagcaagtaagagctt 34649759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 405 - 545
Target Start/End: Original strand, 37555908 - 37556049
Alignment:
Q  405 cagtgatatcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaa-gcaatgttggtccgtt 503  Q
    ||||| |||||||||||| |||| ||||||||| || ||||||||||||  || ||||||| || |||||||||||||| ||| ||| ||| ||||||||    
T  37555908 cagtggtatcagagccccattcggcgaagggtatgatcgaggcagctggtccgattgcgcaaaaagcagcaacggcggtacaaagcagtgtcggtccgtt 37556007  T
Q  504 tgcggagaaaccaacaacgacgatacaagcaagtaagagctt 545  Q
    ||||||||||||| ||||| ||||| ||||||||||||||||    
T  37556008 tgcggagaaaccagcaacggcgatagaagcaagtaagagctt 37556049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 411 - 547
Target Start/End: Original strand, 41157180 - 41157317
Alignment:
Q  411 tatcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgtttgcggag 510  Q
    ||||||||||||||||||| |||||||||||| ||||||  ||  ||||||||||||| ||| ||||| |||| |||| | |||  ||||||||||||||    
T  41157180 tatcagagccccgttcgacaaagggtacgaccaaggcagtcggtccgtttgcgcataaagcaacaacgacggtacaagtagtgtcagtccgtttgcggag 41157279  T
Q  511 aaaccaacaacgacgatacaagcaagta-agagcttcc 547  Q
    ||||||||||||||||||||| |||||| |||||||||    
T  41157280 aaaccaacaacgacgatacaaacaagtagagagcttcc 41157317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 24423303 - 24423383
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcatttc 630  Q
    |||||||||||||||||||||||||||||||| ||| || ||||||||||||||||| || || ||||||||||||||||||    
T  24423303 gtaacaccccgttacccaaaaacaattaaataacatttatacatcagagtaatccac-aatggacatgctacacgtcatttc 24423383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 28557312 - 28557231
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcatttc 630  Q
    |||||||||||||||| |||| |||||||||| ||| || ||||| ||||||||||||||||| ||||||||||||||||||    
T  28557312 gtaacaccccgttacctaaaagcaattaaataacatttatacatctgagtaatccacaaacgggcatgctacacgtcatttc 28557231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 29152186 - 29152104
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| |||||||||| || |||  ||||||||||| ||||||||||| ||||||||||||||||||    
T  29152186 gtaacaccccgttacccaaaagcaattaaataacaaatattcatcagagtaattccacaaacgggcatgctacacgtcatttc 29152104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 18417428 - 18417509
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| ||||||||||||| ||| ||||||||||||| |   ||||| ||||||||||||||||||    
T  18417428 gtaacaccccgttacccaaaagcaattaaatagcaaatatacatcagagtaattccataacgggcatgctacacgtcatttc 18417509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 549 - 629
Target Start/End: Complemental strand, 38908926 - 38908845
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcattt 629  Q
    |||||||||||||||||||||  ||| ||||||| |||| |||||||||||| ||||||||||| |||||||||||||||||    
T  38908926 gtaacaccccgttacccaaaacaaataaaatagcttatatacatcagagtaattccacaaacgggcatgctacacgtcattt 38908845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 549 - 629
Target Start/End: Complemental strand, 38911774 - 38911693
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcattt 629  Q
    |||||||||||||||||||||  ||| ||||||| |||| |||||||||||| ||||||||||| |||||||||||||||||    
T  38911774 gtaacaccccgttacccaaaacaaataaaatagcttatatacatcagagtaattccacaaacgggcatgctacacgtcattt 38911693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 39093571 - 39093652
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcatttc 630  Q
    |||||||| |||||||||||| |||| ||||||||||||||||||||||||||||    |||| ||||||||||||||||||    
T  39093571 gtaacacctcgttacccaaaagcaataaaatagcatataaacatcagagtaatcccaccacgggcatgctacacgtcatttc 39093652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 549 - 621
Target Start/End: Original strand, 48427163 - 48427236
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| | || ||||||| |||||||||    
T  48427163 gtaacaccccgttacccaaaagcaattaaatagcatataaacatcagagtatttcaccaaacgggcatgctaca 48427236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 549 - 621
Target Start/End: Original strand, 52399551 - 52399624
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| | || ||||||| |||||||||    
T  52399551 gtaacaccccgttacccaaaaacaataaaatagcatataaacatcagagtatttcaccaaacgggcatgctaca 52399624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 118 - 381
Target Start/End: Complemental strand, 15585548 - 15585285
Alignment:
Q  118 ccctcctaaagcacaacatgttttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaatt 217  Q
    |||||||||||| | |||||||||| ||||||| ||| ||||||||| |||||| || || ||| |  |||||||||||  | | | | |||| ||| ||    
T  15585548 ccctcctaaagctcgacatgttttgacgagtgccctttttagtaaaagtgttcaggacatggaaatacagtttgacatggacgcaaaatagaatgcagtt 15585449  T
Q  218 ttaggatgtttgcaagcagtacattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatcc 317  Q
    || || | ||||||||||  |||| ||||| |||| ||| |||||| ||| |||||||||||||| ||  ||||||||||||  |||||| ||| ||||     
T  15585448 tttgggtatttgcaagcaacacatgctcaagatttacttttagctatccctattgatgggttaggccaaaatatgtcaccagtagagtattgtactatca 15585349  T
Q  318 ttcgatattgtcttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggc 381  Q
    |    ||| |||| |||||| |  ||||| | ||||||||| | | |||||||||| |||||||    
T  15585348 tcaagtatcgtctcatgatttctttattttccattgatgagatttgccctgtttgttgtaaggc 15585285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 544 - 630
Target Start/End: Complemental strand, 18027564 - 18027478
Alignment:
Q  544 ttccagtaacaccccgttacccaaaaa-caattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcatttc 630  Q
    |||| |||||||||||||||||||||| |||||||||| ||| || |||| |||||||||||| ||||| ||||||||||||||||||    
T  18027564 ttcctgtaacaccccgttacccaaaaagcaattaaataacatttatacataagagtaatccac-aacgggcatgctacacgtcatttc 18027478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 249 - 384
Target Start/End: Complemental strand, 22375275 - 22375141
Alignment:
Q  249 attttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatgattccactatttcc 348  Q
    |||||||||||||||  |  |||||| |||||||||| |||||||||  || |||||| |||| ||||||| ||||| | |||||||||| |||||||||    
T  22375275 attttcttctagctattcatattgatcggttaggtcaacatatgtcat-aggggagtaacgtactatccttagatatcgccttatgattctactatttcc 22375177  T
Q  349 tattgatgaggtgtaccctgtttgtcgtaaggcgtg 384  Q
    || ||||||||| | || |||||| | |||||||||    
T  22375176 tactgatgaggttttccatgtttggcttaaggcgtg 22375141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 3653512 - 3653431
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagta-atccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||||||  ||||| ||||| ||||||||||||||||||    
T  3653512 gtaacaccccgttacccaaaagcaattaaatagcaaatatacatcagagtagttccac-aacgggcatgctacacgtcatttc 3653431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 6739820 - 6739901
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||||||| ||||| ||||| |||||||||||| |||||    
T  6739820 gtaacaccccgttacccaaaagcaattaaatagcaaatatacatcagagtaattccac-aacgggcatgctacacgttatttc 6739901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 20278078 - 20277997
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaat-ccacaaacggtcatgctacacgtcatttc 630  Q
    |||||||||||||| |||||| ||||||||||||| ||| ||||||||||||| |||||| ||| ||||||||||||||||||    
T  20278078 gtaacaccccgttaaccaaaagcaattaaatagcaaatatacatcagagtaattccacaa-cgggcatgctacacgtcatttc 20277997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 549 - 621
Target Start/End: Complemental strand, 26739934 - 26739861
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||| | || ||||||| |||||||||    
T  26739934 gtaacaccccgttacccaaaagcaataaaatagcatataaacatcagagtatttcaccaaacgggcatgctaca 26739861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 81 - 241
Target Start/End: Complemental strand, 972375 - 972218
Alignment:
Q  81 attttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgttttggcgagtgctcttcttagtaaaattgttcaagatataga 180  Q
    ||||||||||||| | |||||| |||||| ||| ||||| | ||||| ||||||||||||||||||||| || | ||||| ||| ||||||||||||  |    
T  972375 attttgacgttagcaattttacttgcaagcacatcgtcctttctaaa-cacaacatgttttggcgagtg-tccttttagtgaaagtgttcaagatatgaa 972278  T
Q  181 agttaagtttgacatgaccactagacagaaggcaattttaggatgtttgcaagcagtacat 241  Q
    |||||||||| ||| ||| || ||||| ||   || |||||| ||||||||||||| ||||    
T  972277 agttaagtttaacaagacaacaagacaaaaaagaa-tttagggtgtttgcaagcaggacat 972218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 29 - 143
Target Start/End: Complemental strand, 7435123 - 7435009
Alignment:
Q  29 atggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaag 128  Q
    ||||||||  |||||||  ||| |||||||||||||||  | || |||  |||||||||| |||||||||||||  | ||||||| ||||||||| ||||    
T  7435123 atggactctgattttgacgatgttttggatggtcttcgtagtaccattctagattttgactttagtagttttactagtaaggacatcgtccctccaaaag 7435024  T
Q  129 cacaacatgttttgg 143  Q
    || ||||||||||||    
T  7435023 cataacatgttttgg 7435009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 17145577 - 17145658
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    |||||| ||||||||||||||||||||||||| ||  || |||||||||||| ||||| ||||| ||||||||||||||||||    
T  17145577 gtaacatcccgttacccaaaaacaattaaataacaattatacatcagagtaattccac-aacgggcatgctacacgtcatttc 17145658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 41050992 - 41051072
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||||||| ||||| ||||| ||||||||| ||||||||    
T  41050992 gtaacaccccgttacccaaaagcaattaaatagca-atatacatcagagtaattccac-aacgggcatgctacatgtcatttc 41051072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 621
Target Start/End: Original strand, 11385245 - 11385318
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    |||||||||||||||||||||  ||| |||||||||||||||||||||||| | || ||||||| |||||||||    
T  11385245 gtaacaccccgttacccaaaaggaataaaatagcatataaacatcagagtattacaccaaacgggcatgctaca 11385318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 621
Target Start/End: Original strand, 17378721 - 17378793
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctaca 621  Q
    ||||||||||||||||||||  |||| ||||| ||||||||||||||||||| ||||||||||| |||||||||    
T  17378721 gtaacaccccgttacccaaag-caataaaataacatataaacatcagagtaattccacaaacgggcatgctaca 17378793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 598
Target Start/End: Original strand, 24065574 - 24065623
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagt 598  Q
    ||||||||||||||||||||| |||| |||||||||||||||||||||||    
T  24065574 gtaacaccccgttacccaaaagcaataaaatagcatataaacatcagagt 24065623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 405 - 450
Target Start/End: Complemental strand, 31767139 - 31767094
Alignment:
Q  405 cagtgatatcagagccccgttcgacgaagggtacgaccgaggcagc 450  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||    
T  31767139 cagtggtatcagagccccgttcgacgaagggtacgaccgaggcagc 31767094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 621
Target Start/End: Complemental strand, 39190522 - 39190449
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    |||||||||||||||||||||  ||| |||||||||||||||||||||||| | || ||||||| |||||||||    
T  39190522 gtaacaccccgttacccaaaaggaataaaatagcatataaacatcagagtattacaccaaacgggcatgctaca 39190449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 57 - 207
Target Start/End: Original strand, 36154622 - 36154771
Alignment:
Q  57 atggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgttttggcgagtgctcttct 156  Q
    |||||||||| || ||||| ||| ||||| || |||| ||||||||  ||||  |||  |||||||||||| |||||||||||||||||||| | ||| |    
T  36154622 atggtcttcgtggtacgatgtcatattttaactttagcagttttactagcaac-acaatgtccctcctaaaacacaacatgttttggcgagttccctttt 36154720  T
Q  157 tagtaaaattgttcaagatatagaagttaagtttgacatgaccactagaca 207  Q
    |||||||| |||| | ||| | ||| | ||||||| |||||| || |||||    
T  36154721 tagtaaaagtgtttaggatgtggaaatgaagtttggcatgactacaagaca 36154771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 549 - 622
Target Start/End: Original strand, 36917086 - 36917159
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacac 622  Q
    ||||||||||||||||||||| || |||||||  | |||||||||||||||| |  ||||||| ||||||||||    
T  36917086 gtaacaccccgttacccaaaatcatttaaatataacataaacatcagagtaagcaccaaacgggcatgctacac 36917159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 549 - 601
Target Start/End: Complemental strand, 33685030 - 33684978
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaat 601  Q
    ||||||||||||||||||||| |||| |||||||||| | |||||||||||||    
T  33685030 gtaacaccccgttacccaaaagcaataaaatagcataaatacatcagagtaat 33684978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 405 - 547
Target Start/End: Complemental strand, 41184384 - 41184240
Alignment:
Q  405 cagtgatatcagagcccc-gttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgtt 503  Q
    ||||| |||||||||||  | ||||||||||||| |||||||||| | ||  |||||||| |  | ||| ||| | |||| |||  | ||| ||||||||    
T  41184384 cagtggtatcagagcccgagctcgacgaagggtaagaccgaggcaaccggtccgtttgcgtagcaagcaacaatgacggtacaattagtgtcggtccgtt 41184285  T
Q  504 tgcggagaaaccaacaacgacgatacaagcaagt-aagagcttcc 547  Q
    |||||| |||||| |||||||||||||| ||||| ||||||||||    
T  41184284 tgcggaaaaaccagcaacgacgatacaaacaagtaaagagcttcc 41184240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 503
Target Start/End: Original strand, 34364687 - 34364786
Alignment:
Q  405 cagtgatatcagagccccg-ttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgtt 503  Q
    ||||| ||||||||||||| ||||||||||||||||||| || |||| ||  |||||| ||| || |||||||||||| | |||| | ||| ||||||||    
T  34364687 cagtggtatcagagccccggttcgacgaagggtacgacccagacagccggtccgtttgtgcagaaagcagcaacggcgatacaagtagtgtcggtccgtt 34364786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 405 - 450
Target Start/End: Complemental strand, 66450 - 66404
Alignment:
Q  405 cagtgatatcagagccccg-ttcgacgaagggtacgaccgaggcagc 450  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||    
T  66450 cagtgatatcagagtcccggttcgacgaagggtacgaccgaggcagc 66404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 249 - 387
Target Start/End: Original strand, 37917644 - 37917782
Alignment:
Q  249 attttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatgattccactatttcc 348  Q
    |||||||||| | || ||| |||||||||||||| ||| ||||||||| ||  ||||| |||| ||| ||  ||||| | || | ||||||| |||  |     
T  37917644 attttcttcttgttatccctattgatgggttaggccagaatatgtcactagtagagtaccgtactattctcagatatcgcctcaagattccattataaca 37917743  T
Q  349 tattgatgaggtgtaccctgtttgtcgtaaggcgtgtct 387  Q
    | |||||||||||| | ||||||||||||| ||||||||    
T  37917744 tgttgatgaggtgtgctctgtttgtcgtaaagcgtgtct 37917782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 38908783 - 38908742
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaaca 733  Q
    ||||||||||||||||||||||||||||| || |||||||||    
T  38908783 atagcagcggaatagttttcaaaatccatatcctcatgaaca 38908742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 38911631 - 38911590
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaaca 733  Q
    ||||||||||||||||||||||||||||| || |||||||||    
T  38911631 atagcagcggaatagttttcaaaatccatatcctcatgaaca 38911590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 503 - 547
Target Start/End: Complemental strand, 22077753 - 22077709
Alignment:
Q  503 ttgcggagaaaccaacaacgacgatacaagcaagtaagagcttcc 547  Q
    ||||||||||||||  ||||||||||||||||| |||||||||||    
T  22077753 ttgcggagaaaccagtaacgacgatacaagcaattaagagcttcc 22077709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 343 - 391
Target Start/End: Complemental strand, 22347340 - 22347292
Alignment:
Q  343 atttcctattgatgaggtgtaccctgtttgtcgtaaggcgtgtctggat 391  Q
    |||| ||||||||||||||| |||||||||||||||||| || ||||||    
T  22347340 attttctattgatgaggtgtgccctgtttgtcgtaaggcatgcctggat 22347292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 503 - 547
Target Start/End: Complemental strand, 47380043 - 47379999
Alignment:
Q  503 ttgcggagaaaccaacaacgacgatacaagcaagtaagagcttcc 547  Q
    ||||||||||| || |||||||||||||||||||||||| |||||    
T  47380043 ttgcggagaaagcagcaacgacgatacaagcaagtaagaacttcc 47379999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 492 - 547
Target Start/End: Complemental strand, 30630908 - 30630853
Alignment:
Q  492 tgttggtccgtttgcggagaaaccaacaacgacgatacaagcaagtaagagcttcc 547  Q
    ||||||||||||||||||||||  |  ||| |||||||||||||||||| ||||||    
T  30630908 tgttggtccgtttgcggagaaagtagtaacaacgatacaagcaagtaagtgcttcc 30630853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 549 - 621
Target Start/End: Original strand, 11387264 - 11387335
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctaca 621  Q
    ||||||||||||| ||  ||| |||| ||||| ||||||||||||||||||| |||||| |||| |||||||||    
T  11387264 gtaacaccccgttccc--aaagcaataaaataacatataaacatcagagtaattccacatacgggcatgctaca 11387335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 549 - 622
Target Start/End: Original strand, 21948758 - 21948832
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctacac 622  Q
    |||||||||||||||||||||  ||||||||| || |||  |||||||||| | || ||||||| ||||||||||    
T  21948758 gtaacaccccgttacccaaaagtaattaaataacaaatattcatcagagtatttcaccaaacgggcatgctacac 21948832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 549 - 622
Target Start/End: Original strand, 21962319 - 21962393
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctacac 622  Q
    |||||||||||||||||||||  ||||||||| || |||  |||||||||| | || ||||||| ||||||||||    
T  21962319 gtaacaccccgttacccaaaagtaattaaataacaaatattcatcagagtatttcaccaaacgggcatgctacac 21962393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 549 - 622
Target Start/End: Original strand, 24849416 - 24849490
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacac 622  Q
    |||||||||||||||||||||  ||||||||| || |||  ||||| ||||| || |||||||| ||||||||||    
T  24849416 gtaacaccccgttacccaaaagtaattaaataacaaatattcatcaaagtaattcaacaaacgggcatgctacac 24849490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 549 - 621
Target Start/End: Complemental strand, 27694328 - 27694257
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctaca 621  Q
    ||||||||||||| ||  ||| |||| ||||| ||||||||||||||||||| |||||| |||| |||||||||    
T  27694328 gtaacaccccgttccc--aaagcaataaaataacatataaacatcagagtaattccacatacgggcatgctaca 27694257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 549 - 599
Target Start/End: Complemental strand, 31536110 - 31536060
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagta 599  Q
    |||||||||||||||||||||||||||| ||| || |||  ||||||||||    
T  31536110 gtaacaccccgttacccaaaaacaattatataacaaatattcatcagagta 31536060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 549 - 599
Target Start/End: Complemental strand, 31564827 - 31564777
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagta 599  Q
    |||||||||||||||||||||||||||| ||| || |||  ||||||||||    
T  31564827 gtaacaccccgttacccaaaaacaattatataacaaatattcatcagagta 31564777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 405 - 450
Target Start/End: Complemental strand, 44290801 - 44290755
Alignment:
Q  405 cagtgatatcagagccccg-ttcgacgaagggtacgaccgaggcagc 450  Q
    ||||| ||||||||||||| ||||||||||||| |||||||||||||    
T  44290801 cagtggtatcagagccccggttcgacgaagggtgcgaccgaggcagc 44290755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 3653371 - 3653330
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaaca 733  Q
    |||||||||||||||||||||||||||||  | |||||||||    
T  3653371 atagcagcggaatagttttcaaaatccataacctcatgaaca 3653330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 6739961 - 6740002
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaaca 733  Q
    |||||||||||||||||||||||||||||  | |||||||||    
T  6739961 atagcagcggaatagttttcaaaatccataacctcatgaaca 6740002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 18417569 - 18417610
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaaca 733  Q
    |||||||||||||||||||||||||||||  | |||||||||    
T  18417569 atagcagcggaatagttttcaaaatccataacctcatgaaca 18417610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 20277937 - 20277896
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaaca 733  Q
    |||||||||||||||||||||||||||||  | |||||||||    
T  20277937 atagcagcggaatagttttcaaaatccataacctcatgaaca 20277896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 598
Target Start/End: Original strand, 21920143 - 21920192
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagt 598  Q
    |||||||||||||||||||||  |||||||||  | ||||||||||||||    
T  21920143 gtaacaccccgttacccaaaagtaattaaatataacataaacatcagagt 21920192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 498 - 547
Target Start/End: Original strand, 34364816 - 34364865
Alignment:
Q  498 tccgtttgcggagaaaccaacaacgacgatacaagcaagtaagagcttcc 547  Q
    |||||||||||| |||||| ||||  ||| ||||||||||||||||||||    
T  34364816 tccgtttgcggaaaaaccagcaacagcgacacaagcaagtaagagcttcc 34364865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 186; Significance: 1e-100; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 39 - 384
Target Start/End: Complemental strand, 53171265 - 53170920
Alignment:
Q  39 attttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgt 138  Q
    |||||||||||  ||||||| ||||||| ||  |||||||||||||||| ||||||||||||||  |||| |||| ||||||||||||||||||||||||    
T  53171265 attttgataatattttggattgtcttcgtggtgcgatttcagattttgatgttagtagttttactagcaaagacatcgtccctcctaaagcacaacatgt 53171166  T
Q  139 tttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtttgcaagcagta 238  Q
    |||||||||||||||| ||||||||| ||||||| |||| ||||||||||||||||| ||||| ||| ||||  ||||||| |||||||||||||||| |    
T  53171165 tttggcgagtgctctttttagtaaaagtgttcaaaatatggaagttaagtttgacataaccacgagaaagaaaacaatttttggatgtttgcaagcagca 53171066  T
Q  239 cattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatgattc 338  Q
    ||| ||||  ||||||||||||||| || |||||||||||||| ||||||||| ||| ||| ||||||||||| |||| || |||||   |||| |||||    
T  53171065 catgctcaggattttcttctagctatcctaattgatgggttagttcagcatatatcatcagtggagtatcgtactatctttagatatcaccttacgattc 53170966  T
Q  339 cactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtg 384  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||    
T  53170965 cactattttctattgatgaggtgtgccctgtttgtcgtaaggcgtg 53170920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 154; E-Value: 3e-81
Query Start/End: Original strand, 39 - 391
Target Start/End: Original strand, 56461455 - 56461806
Alignment:
Q  39 attttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgt 138  Q
    ||||| ||||||||||||||| |||||| || ||||||  |||||||||| || | ||||||||  |||||||||  ||||||||||||||||||||| |    
T  56461455 attttaataatgctttggatg-tcttcgtggtacgattctagattttgacattggcagttttactagcaaggacattgtccctcctaaagcacaacatat 56461553  T
Q  139 tttggcgagtgctcttctt-agtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtttgcaagcagt 237  Q
    ||||||||||||| || || ||||||| |||||||||||| |||||||||||  ||||||||||||||||||||| | ||||||||||||||||| |||     
T  56461554 tttggcgagtgcttttttttagtaaaagtgttcaagatatggaagttaagttc-acatgaccactagacagaaggaagttttaggatgtttgcaaacagc 56461652  T
Q  238 acattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatgatt 337  Q
    |||| ||||| ||||| ||||||||| |  ||||||| |||||||||| ||||| ||||||  |||||||||||  |||||| |||||   |||||||||    
T  56461653 acatgctcaagatttttttctagctatcataattgattggttaggtcatcatatatcaccaatggagtatcgtaccatccttagatataaccttatgatt 56461752  T
Q  338 ccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtgtctggat 391  Q
    ||||||||| ||||||||||||||| |||||||| |||||||| ||| ||||||    
T  56461753 ccactattttctattgatgaggtgtgccctgtttttcgtaaggtgtgcctggat 56461806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 110 - 384
Target Start/End: Complemental strand, 16958230 - 16957958
Alignment:
Q  110 gacaccgtccctcctaaagcacaacatgttttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacaga 209  Q
    ||||| || |||| ||||||||||||||||||| ||||||||||| | ||||||| || ||| ||||| ||||||||||||||||| || || |||||||    
T  16958230 gacactgttcctcataaagcacaacatgttttg-cgagtgctcttttgagtaaaagtgctcacgatatggaagttaagtttgacataactacgagacaga 16958132  T
Q  210 aggcaattttaggatgtttgcaagcagtacattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcg 309  Q
    ||||||||||||||| ||||||||||| |||| ||| | ||||||||||||||| ||  |||||||||| ||| |||||||||||||||| ||| ||  |    
T  16958131 aggcaattttaggatatttgcaagcagcacatgctctagattttcttctagctatcctcattgatgggtaaggccagcatatgtcaccagtggattactg 16958032  T
Q  310 tattatccttcgatattgtcttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtg 384  Q
    || ||||||| |||| || |||||||||||||||||| ||||||||||||||| || ||||||||||||||||||    
T  16958031 tactatccttagata-tgccttatgattccactattttctattgatgaggtgtgccttgtttgtcgtaaggcgtg 16957958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 27 - 200
Target Start/End: Original strand, 23809027 - 23809200
Alignment:
Q  27 atatggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaa 126  Q
    ||||||||||  ||||| | | |||||||||||||||||| || | ||||| | |||||||| |||||||||||||  | |||||||||||||||| |||    
T  23809027 atatggactccgattttcacattgctttggatggtcttcgtggtatgattttaaattttgactttagtagttttactagtaaggacaccgtccctcataa 23809126  T
Q  127 agcacaacatgttttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgacca 200  Q
    |||||||||| |||||| || || | || ||||||||| |||||||||||| ||||| || |||||||||||||    
T  23809127 agcacaacatattttggtgattggtttttttagtaaaaatgttcaagatatggaagtgaaatttgacatgacca 23809200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 412 - 539
Target Start/End: Original strand, 20826024 - 20826152
Alignment:
Q  412 atcagagccccg-ttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgtttgcggag 510  Q
    |||||||||||  ||||||||||||||||||||||||||| ||  | |||||||| || |||||||||||||| |||||| ||||| |||||||||||||    
T  20826024 atcagagccccaattcgacgaagggtacgaccgaggcagccggtccatttgcgcagaaagcagcaacggcggtacaagcagtgttgatccgtttgcggag 20826123  T
Q  511 aaaccaacaacgacgatacaagcaagtaa 539  Q
    |||||| ||||| ||||||||||||||||    
T  20826124 aaaccagcaacggcgatacaagcaagtaa 20826152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 411 - 547
Target Start/End: Original strand, 54108723 - 54108858
Alignment:
Q  411 tatcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgtttgcggag 510  Q
    |||||||||| |||||||||||||||||||| |||||||| ||  ||||||||||||| ||||||| |||||| |||| | ||| ||| |||||| ||||    
T  54108723 tatcagagccacgttcgacgaagggtacgac-gaggcagccggtccgtttgcgcataaagcagcaatggcggtacaagtagtgtcggttcgtttgtggag 54108821  T
Q  511 aaaccaacaacgacgatacaagcaagtaagagcttcc 547  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  54108822 aaaccagcaacggcgatacaagcaagtaagagcttcc 54108858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 138 - 296
Target Start/End: Complemental strand, 25707171 - 25707012
Alignment:
Q  138 ttttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtttgcaagcagt 237  Q
    |||| |||| || |||| ||||||||| |||| || |||| ||||||||||||||||| |  ||||||||||||| | |||||||||||||||||||||     
T  25707171 ttttagcgaatgatctttttagtaaaagtgtttaaaatatggaagttaagtttgacataattactagacagaaggaagttttaggatgtttgcaagcagc 25707072  T
Q  238 acattctcaaaattttcttctagcta-gcccaattgatgggttaggtcagcatatgtcac 296  Q
    |||| || |  |||||||||||||||  ||| ||||||||||||||||||||||||||||    
T  25707071 acatgctgaggattttcttctagctacacccgattgatgggttaggtcagcatatgtcac 25707012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 405 - 545
Target Start/End: Complemental strand, 22028343 - 22028203
Alignment:
Q  405 cagtgatatcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgttt 504  Q
    ||||| |||| |||||||||||||||||||||| ||||||| |||   |  |||||| |||||| ||| ||||| |||| |||| | ||| |||||||||    
T  22028343 cagtggtatcggagccccgttcgacgaagggtatgaccgagacagtcagtccgtttgtgcataaagcaacaacgacggtacaagtagtgtcggtccgttt 22028244  T
Q  505 gcggagaaaccaacaacgacgatacaagcaagtaagagctt 545  Q
    |||||||||||| |||||||||| |||||||||||||||||    
T  22028243 gcggagaaaccagcaacgacgattcaagcaagtaagagctt 22028203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 405 - 547
Target Start/End: Original strand, 2740871 - 2741013
Alignment:
Q  405 cagtgatatcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgttt 504  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| |   |||||||||| || |||||||| ||||| ||| |  ||| |||||||||    
T  2740871 cagtggtatcagagccccgttcgacgaagggtacgaccgaggcagccgatccgtttgcgcagaaagcagcaacagcggtacaatc-gtgtcggtccgttt 2740969  T
Q  505 gcggagaaaccaacaacgacgatacaagc-aagtaagagcttcc 547  Q
    || ||||||||| ||||| |||||| ||| ||||||||||||||    
T  2740970 gcagagaaaccagcaacggcgatacgagcaaagtaagagcttcc 2741013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 38 - 362
Target Start/End: Original strand, 48505537 - 48505861
Alignment:
Q  38 aattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatg 137  Q
    ||||||||||||  |||||| ||  || |||| || |||| ||||||||| | |||||||| ||  || ||| ||   ||| ||| ||||| |||| ||     
T  48505537 aattttgataatattttggagggattttgcggtacaattttagattttgatgatagtagttgtatttggaagaaccatgtctctcataaagtacaatata 48505636  T
Q  138 ttttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtttgcaagcagt 237  Q
    ||||| ||| || |||| ||||||||| | || |||||||  ||||||||||||| ||||| |||||| | ||   || |||| | ||||||||| ||      
T  48505637 ttttgacgaatgttctttttagtaaaaatatttaagatatgaaagttaagtttgatatgactactagatataaaataaatttaaggtgtttgcaaacaac 48505736  T
Q  238 acattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatgatt 337  Q
    ||||  | |  ||||| ||||||||| ||  ||||||||||||| ||| ||||||| | | | ||||||||||||||||||| ||||| | |||||||||    
T  48505737 acatgattaggatttttttctagctatccatattgatgggttagatcaacatatgttatcggtggagtatcgtattatccttagatatcgccttatgatt 48505836  T
Q  338 ccactatttcctattgatgaggtgt 362  Q
    |||||||||| ||||||||| ||||    
T  48505837 ccactatttcatattgatgatgtgt 48505861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 405 - 547
Target Start/End: Original strand, 43174323 - 43174466
Alignment:
Q  405 cagtgatatcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaa-gcaatgttggtccgtt 503  Q
    ||||| ||||| ||| |||||||||||| |||| || ||||||||| ||  |||||||||| || | ||||||| |||| ||| ||| ||| |||| |||    
T  43174323 cagtggtatcaaagcaccgttcgacgaaaggtaagatcgaggcagccggtccgtttgcgcagaaagtagcaacgacggtacaaagcagtgtcggtctgtt 43174422  T
Q  504 tgcggagaaaccaacaacgacgatacaagcaagtaagagcttcc 547  Q
    ||||||||||||||||||| |||||||| |||||||||||||||    
T  43174423 tgcggagaaaccaacaacggcgatacaaacaagtaagagcttcc 43174466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 414 - 547
Target Start/End: Complemental strand, 16889503 - 16889369
Alignment:
Q  414 cagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgtttgcggagaaa 513  Q
    |||||||| ||||||||||||||||||| |||||| | ||  |||||| ||| || |||||||||||||| |||| | |||  ||||||||| |||||||    
T  16889503 cagagccctgttcgacgaagggtacgactgaggcaaccggtccgtttgtgcagaaagcagcaacggcggtacaagtagtgtccgtccgtttgaggagaaa 16889404  T
Q  514 ccaacaacgacgatacaagcaagt-aagagcttcc 547  Q
    ||| |||||||||||||| ||||| ||||||||||    
T  16889403 ccagcaacgacgatacaaacaagtaaagagcttcc 16889369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 35149975 - 35149894
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||   ||||| ||||||||||||||||||    
T  35149975 gtaacaccccgttacccaaaagcaataaaatagcatataaacatcagagtaatcccacaacgggcatgctacacgtcatttc 35149894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 29383591 - 29383511
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcatttc 630  Q
    |||||||||||||| ||||||||||||||||| ||| || ||||||||||||||||| ||||| ||||||||||||||||||    
T  29383591 gtaacaccccgttatccaaaaacaattaaataacatttatacatcagagtaatccac-aacgggcatgctacacgtcatttc 29383511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 405 - 547
Target Start/End: Complemental strand, 23817655 - 23817512
Alignment:
Q  405 cagtgatatcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgttt 504  Q
    ||||| ||||| |||||| ||||||||||||||||| ||||||||| ||   ||||||||| || ||||||||| |||| |||| | ||| |||| ||||    
T  23817655 cagtggtatcatagccccattcgacgaagggtacgatcgaggcagccggtctgtttgcgcagaaagcagcaacgacggtacaagtagtgtcggtctgttt 23817556  T
Q  505 gcggagaaaccaacaacgacgatacaagcaagt-aagagcttcc 547  Q
      |||||||||| |||| ||||||||| ||||| ||||||||||    
T  23817555 ctggagaaaccagcaacaacgatacaaacaagtaaagagcttcc 23817512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 15471433 - 15471352
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaat-ccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| |||| |||||||||||| ||||||||||||| |||||| ||| ||||||||||||||||||    
T  15471433 gtaacaccccgttacccaaaagcaataaaatagcatatatacatcagagtaattccacaa-cgggcatgctacacgtcatttc 15471352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 23436814 - 23436732
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    |||||||||||||||||||||||||| |   |||||||| |||||||||||| ||||||||||| ||||||||||||||||||    
T  23436814 gtaacaccccgttacccaaaaacaataactcagcatatatacatcagagtaattccacaaacgggcatgctacacgtcatttc 23436732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 29449565 - 29449483
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    |||||||||||||||||||||  ||| ||||||| |||| |||||||||||| ||||||||||| ||||||||||||||||||    
T  29449565 gtaacaccccgttacccaaaacaaataaaatagcttatatacatcagagtaattccacaaacgggcatgctacacgtcatttc 29449483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 423 - 532
Target Start/End: Original strand, 39404217 - 39404329
Alignment:
Q  423 gttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcgg---tgcaagcaatgttggtccgtttgcggagaaaccaaca 519  Q
    ||||||||||||||| |||||||||||| ||  |||||||| | || ||||||||| |||   |||||||| ||| ||||||||||||||||||||| ||    
T  39404217 gttcgacgaagggtatgaccgaggcagccggtccgtttgcgtagaaagcagcaacgacggcagtgcaagcagtgtcggtccgtttgcggagaaaccatca 39404316  T
Q  520 acgacgatacaag 532  Q
    ||| |||||||||    
T  39404317 acggcgatacaag 39404329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 411 - 547
Target Start/End: Complemental strand, 45489684 - 45489548
Alignment:
Q  411 tatcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgtttgcggag 510  Q
    |||||||| |||||| ||||||||||||||||||| || | ||  |||||| | | |  | |||||||||||| |||| | ||| |||||||||||||||    
T  45489684 tatcagagtcccgtttgacgaagggtacgaccgagacaaccggtccgtttgtgtagatagtagcaacggcggtacaagaagtgtcggtccgtttgcggag 45489585  T
Q  511 aaaccaacaacgacgatacaagcaagtaagagcttcc 547  Q
    || ||| |||   ||||||||||||||||||||||||    
T  45489584 aacccagcaatagcgatacaagcaagtaagagcttcc 45489548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 405 - 547
Target Start/End: Complemental strand, 49076808 - 49076666
Alignment:
Q  405 cagtgatatcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttg-cgcataaggcagcaacggcggtgcaagcaatgttggtccgtt 503  Q
    ||||| ||||||||||||||||||| |||||||| |||||||||||  |  | |||  ||||||| ||||||| | |||| ||| |  ||| ||||||||    
T  49076808 cagtggtatcagagccccgttcgacaaagggtactaccgaggcagccagtccattttacgcataaagcagcaatgacggtacaaacg-tgtcggtccgtt 49076710  T
Q  504 tgcggagaaaccaacaacgacgatacaagcaagtaagagcttcc 547  Q
    || |||||||||| ||||||| ||||||||||||||||| ||||    
T  49076709 tgtggagaaaccagcaacgacaatacaagcaagtaagagtttcc 49076666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 390376 - 390457
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagta-atccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||||||  ||||| ||||| ||||||||||||||||||    
T  390376 gtaacaccccgttacccaaaagcaattaaatagcaaatatacatcagagtagttccac-aacgggcatgctacacgtcatttc 390457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 3260822 - 3260741
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagta-atccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||||||  ||||| ||||| ||||||||||||||||||    
T  3260822 gtaacaccccgttacccaaaagcaattaaatagcaaatatacatcagagtagttccac-aacgggcatgctacacgtcatttc 3260741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 549 - 621
Target Start/End: Original strand, 26394940 - 26395012
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctaca 621  Q
    ||||||||||||||||||||  |||| ||||||||||||||||||||||||| ||||||||||| |||||||||    
T  26394940 gtaacaccccgttacccaaag-caataaaatagcatataaacatcagagtaattccacaaacgggcatgctaca 26395012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 549 - 629
Target Start/End: Complemental strand, 29456249 - 29456168
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcattt 629  Q
    |||||| ||||||||||||||  ||| ||||||| |||| |||||||||||| ||||||||||| |||||||||||||||||    
T  29456249 gtaacatcccgttacccaaaacaaataaaatagcttatatacatcagagtaattccacaaacgggcatgctacacgtcattt 29456168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 319 - 391
Target Start/End: Original strand, 12917986 - 12918058
Alignment:
Q  319 tcgatattgtcttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtgtctggat 391  Q
    |||||||| |||||||||| |||||||| ||||||||||| ||| || |||||||||||||| ||||||||||    
T  12917986 tcgatattatcttatgatttcactattttctattgatgagatgtgccatgtttgtcgtaaggtgtgtctggat 12918058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 1583160 - 1583241
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| |||||||||| || |||  ||||||||||| ||||| ||||| ||||||||||||||||||    
T  1583160 gtaacaccccgttacccaaaagcaattaaataacaaatattcatcagagtaattccac-aacgggcatgctacacgtcatttc 1583241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 621
Target Start/End: Original strand, 17667329 - 17667402
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    |||||||||||||||||||||  ||| |||||||||||||||||||||||| | || ||||||| |||||||||    
T  17667329 gtaacaccccgttacccaaaagaaataaaatagcatataaacatcagagtattacaccaaacgggcatgctaca 17667402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 406 - 483
Target Start/End: Complemental strand, 50627748 - 50627671
Alignment:
Q  406 agtgatatcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggt 483  Q
    |||| ||||||||||||||||||| |||||||||| ||||||||| || |||||||| || || |||||| |||||||    
T  50627748 agtggtatcagagccccgttcgacaaagggtacgatcgaggcagccggttcgtttgcacagaaagcagcagcggcggt 50627671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 405 - 532
Target Start/End: Original strand, 44621179 - 44621307
Alignment:
Q  405 cagtgatatcagagccccg-ttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgtt 503  Q
    ||||| ||||||||||| | || ||||||||||||||||||| |||| ||  ||||| |||| || |||||||||||| | |||| | ||| ||||||||    
T  44621179 cagtggtatcagagccctggtttgacgaagggtacgaccgagacagccggtccgttttcgcagaaagcagcaacggcgatacaagtagtgtcggtccgtt 44621278  T
Q  504 tgcggagaaaccaacaacgacgatacaag 532  Q
    | || ||||| || ||||| |||||||||    
T  44621279 ttcgcagaaagcagcaacggcgatacaag 44621307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 52499802 - 52499882
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||| ||||||| |||||||| || ||||||||| ||||||||    
T  52499802 gtaacaccccgttacccaaaagcaattaaatagca-atatacataagagtaattccacaaa-gggcatgctacatgtcatttc 52499882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 549 - 622
Target Start/End: Complemental strand, 19129159 - 19129086
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacac 622  Q
    ||||||||||||||||||||| || |||||||  | |||||||||||||||| |  ||||||| ||||||||||    
T  19129159 gtaacaccccgttacccaaaatcatttaaatataacataaacatcagagtaagcaccaaacgggcatgctacac 19129086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 420 - 539
Target Start/End: Original strand, 31691348 - 31691467
Alignment:
Q  420 cccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgtttgcggagaaaccaaca 519  Q
    |||||| ||||||||||||||||||||| |||||  |||||||||| ||  ||||||   |||| |||  | |||  || ||||||| ||||||||| ||    
T  31691348 cccgtttgacgaagggtacgaccgaggccgctggtccgtttgcgcagaaaacagcaaaaacggtacaaatagtgtcagttcgtttgcagagaaaccagca 31691447  T
Q  520 acgacgatacaagcaagtaa 539  Q
    ||| |||||||| |||||||    
T  31691448 acggcgatacaaacaagtaa 31691467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 622
Target Start/End: Original strand, 21880864 - 21880938
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctacac 622  Q
    |||||||||||||||||||||  |||||||||  | ||| ||||||||||||| || ||||||| ||||||||||    
T  21880864 gtaacaccccgttacccaaaagtaattaaatataaaatatacatcagagtaattcaccaaacgggcatgctacac 21880938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 249 - 351
Target Start/End: Complemental strand, 32335408 - 32335307
Alignment:
Q  249 attttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatgattccactatttcc 348  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||  || |||||| | || ||| ||| ||||| | | |||||||||| |||||||    
T  32335408 attttcttctagctatccctattgatggattaggtcatcatatgtcattagtggagtaccatactat-cttagatatcgccgtatgattccaatatttcc 32335310  T
Q  349 tat 351  Q
    |||    
T  32335309 tat 32335307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 599
Target Start/End: Complemental strand, 53906098 - 53906048
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagta 599  Q
    |||||||||||||| || |||||||||||||| || |||||||||||||||    
T  53906098 gtaacaccccgttatcccaaaacaattaaataacaaataaacatcagagta 53906048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 54845768 - 54845687
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    |||||||||| ||||||||||||||||||||| || |||  ||||||||||| ||||| |||||  ||||||||| |||||||    
T  54845768 gtaacaccccattacccaaaaacaattaaataacaaatattcatcagagtaattccac-aacgggtatgctacacttcatttc 54845687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 29449423 - 29449382
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaaca 733  Q
    ||||||||||||||||||||||||||||| || |||||||||    
T  29449423 atagcagcggaatagttttcaaaatccatatcctcatgaaca 29449382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 29456107 - 29456066
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaaca 733  Q
    ||||||||||||||||||||||||||||| || |||||||||    
T  29456107 atagcagcggaatagttttcaaaatccatatcctcatgaaca 29456066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 550 - 630
Target Start/End: Complemental strand, 37624172 - 37624092
Alignment:
Q  550 taacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    |||||||| ||||||||||| |||||||||| || |||  ||||||||||| | ||| ||||| ||||||||||||||||||    
T  37624172 taacaccctgttacccaaaagcaattaaataacaaatattcatcagagtaatttcac-aacgggcatgctacacgtcatttc 37624092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 549 - 622
Target Start/End: Original strand, 34771490 - 34771565
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccac--aaacggtcatgctacac 622  Q
    |||||||||||||||||||||||| ||||||| || |||  |||||||||| | |||  |||||| ||||||||||    
T  34771490 gtaacaccccgttacccaaaaacatttaaataacaaatattcatcagagtatttcaccaaaacgggcatgctacac 34771565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 456 - 547
Target Start/End: Original strand, 44621275 - 44621367
Alignment:
Q  456 cgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgtttgcggagaaaccaacaacgacgatacaagcaagt-aagagcttcc 547  Q
    ||||| |||| || |||||||||||| | |||| | ||| ||||| ||||| |||| |||| |||||||||||||| ||||| ||||||||||    
T  44621275 cgttttcgcagaaagcagcaacggcgatacaagtagtgtcggtccatttgcagagacaccagcaacgacgatacaaacaagtaaagagcttcc 44621367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 549 - 601
Target Start/End: Complemental strand, 47873243 - 47873191
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaat 601  Q
    ||||||||||||||| |||||||||||||||| || |||  ||||||||||||    
T  47873243 gtaacaccccgttacacaaaaacaattaaataacaaatattcatcagagtaat 47873191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 191 - 282
Target Start/End: Complemental strand, 24222506 - 24222415
Alignment:
Q  191 gacatgaccactagacagaaggcaattttaggatgtttgcaagcagtacattctcaaaattttcttctagctagcccaattgatgggttagg 282  Q
    ||||||||||| ||| |||| | |||| | || ||||||||||||  |||| |||||||||||||| || ||| | | ||||||||||||||    
T  24222506 gacatgaccacaagagagaaagtaattgttgggtgtttgcaagcatcacatgctcaaaattttcttttaactatctctattgatgggttagg 24222415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 405 - 450
Target Start/End: Original strand, 41370537 - 41370583
Alignment:
Q  405 cagtgatatcagagccccg-ttcgacgaagggtacgaccgaggcagc 450  Q
    ||||||||||||||||||  ||||||||||||| |||||||||||||    
T  41370537 cagtgatatcagagcccccattcgacgaagggtgcgaccgaggcagc 41370583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 49549988 - 49549907
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagta-atccacaaacggtcatgctacacgtcatttc 630  Q
    |||||||||||||||||||||||||||| ||  || |||  ||||||||||  ||||| ||||| |||| |||||||||||||    
T  49549988 gtaacaccccgttacccaaaaacaattatattacaaatattcatcagagtagttccac-aacgggcatgttacacgtcatttc 49549907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 390517 - 390558
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaaca 733  Q
    |||||||||||||||||||||||||||||  | |||||||||    
T  390517 atagcagcggaatagttttcaaaatccataacctcatgaaca 390558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 3260681 - 3260640
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaaca 733  Q
    |||||||||||||||||||||||||||||  | |||||||||    
T  3260681 atagcagcggaatagttttcaaaatccataacctcatgaaca 3260640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 550 - 599
Target Start/End: Original strand, 45003689 - 45003738
Alignment:
Q  550 taacaccccgttacccaaaaacaattaaatagcatataaacatcagagta 599  Q
    ||||||||||||||||||||||||||| ||| || |||  ||||||||||    
T  45003689 taacaccccgttacccaaaaacaattatataacaaatattcatcagagta 45003738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 163; Significance: 1e-86; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 163; E-Value: 1e-86
Query Start/End: Original strand, 28 - 384
Target Start/End: Original strand, 52411234 - 52411587
Alignment:
Q  28 tatggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaa 127  Q
    |||||||||  ||||||||||||||||| |||||||||| || ||||||||| |||||||| |||  |||||||| |||||||||||||||| |||||||    
T  52411234 tatggactcggattttgataatgctttgaatggtcttcgtggtacgatttcaaattttgacattatcagttttacttgcaaggacaccgtccttcctaaa 52411333  T
Q  128 gcacaacatgttttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtt 227  Q
    |||||   |||||| |||||||||||| ||||||||| |||| ||||||| ||||||||||||| ||||| || |||||| ||| |||||||||| ||||    
T  52411334 gcaca---tgttttagcgagtgctctttttagtaaaagtgttaaagatatggaagttaagtttggcatgaacattagacaaaagacaattttagggtgtt 52411430  T
Q  228 tgcaagcagtacattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattg 327  Q
    |||| ||||  ||| ||||  ||||||||||||||| ||| ||||||| |||| ||||||||||||||| || ||||||||||  ||||||| ||||| |    
T  52411431 tgcatgcagcgcatgctcatgattttcttctagctatcccgattgatgagttaagtcagcatatgtcacgagtggagtatcgtgctatccttagatatcg 52411530  T
Q  328 tcttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtg 384  Q
     ||| |||||||| | |||||||||||| ||||||  ||||||||||||||||||||    
T  52411531 ccttgtgattccattgtttcctattgataaggtgtgtcctgtttgtcgtaaggcgtg 52411587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 160; E-Value: 7e-85
Query Start/End: Original strand, 120 - 391
Target Start/End: Complemental strand, 53786389 - 53786123
Alignment:
Q  120 ctcctaaagcacaacatgttttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaatttt 219  Q
    |||||||| |||||||||||||||||||||||||| ||||||||| ||||||||| || |     ||||||||||||||||| ||||| |||||||||||    
T  53786389 ctcctaaaacacaacatgttttggcgagtgctctttttagtaaaagtgttcaagacatgg-----aagtttgacatgaccacgagacataaggcaatttt 53786295  T
Q  220 aggatgtttgcaagcagtacattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatcctt 319  Q
     |||||||||||||||  |||| ||||| |||||||||||||||  |  ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  53786294 tggatgtttgcaagcaccacatgctcaagattttcttctagctattctgattgatgggttaggtcagcatatgtcaccagtggagtatcgtattatcctt 53786195  T
Q  320 cgatattgtcttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtgtctggat 391  Q
     ||||| | |||||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  53786194 agatatcgccttatgattcaactatttcctattgatgaggtgtaccttgtttgtcgtaaggcgtgcctggat 53786123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 156; E-Value: 2e-82
Query Start/End: Original strand, 39 - 384
Target Start/End: Complemental strand, 29862568 - 29862219
Alignment:
Q  39 attttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaagcacaacatgt 138  Q
    |||||||||||||||||||||||||||| || ||||||  |||||||| | |||||||||||||   |||||||| ||||||||||||||||||||||||    
T  29862568 attttgataatgctttggatggtcttcgtggtacgattctagattttggcattagtagttttactaacaaggacatcgtccctcctaaagcacaacatgt 29862469  T
Q  139 tttggcgagtgc---tcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtttgcaagca 235  Q
    |||||| | |||   | || ||||||||| |||||||||||| ||||||||||||||||||| |||| |||| || ||| ||||||||||||||||| ||    
T  29862468 tttggccaatgctgttttttttagtaaaagtgttcaagatatggaagttaagtttgacatgatcactcgacataatgcagttttaggatgtttgcaaaca 29862369  T
Q  236 gtacattctcaaaattttcttctagctagcccaattgatgggtt-aggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatg 334  Q
      |||| ||||  ||||||||||||||| | | ||||||||||| | |||||||||||||||||| | |||| |||| ||||||| ||||| | ||||||    
T  29862368 acacatgctcatgattttcttctagctatctcgattgatgggttaaagtcagcatatgtcaccagtgaagtagcgtactatccttagatatcgccttatg 29862269  T
Q  335 attccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtg 384  Q
    |||||| ||||||||||||||||||||| | || ||| ||||||||||||    
T  29862268 attccattatttcctattgatgaggtgttctctatttatcgtaaggcgtg 29862219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 28 - 344
Target Start/End: Complemental strand, 49018729 - 49018414
Alignment:
Q  28 tatggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaa 127  Q
    ||||||||| ||||| |||||||||||||||||| |||| |  ||||||  ||||||||||||||| ||||||||  |||| ||||  ||| ||||||||    
T  49018729 tatggactcgaattt-gataatgctttggatggttttcgtgctacgattctagattttgacgttagcagttttactagcaaagacattgtctctcctaaa 49018631  T
Q  128 gcacaacatgttttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtt 227  Q
    ||||||||||||||||||||||||||| ||| ||||| | ||||||||||  |||||||||||||| ||||||| ||||| ||| |||||||||||||||    
T  49018630 gcacaacatgttttggcgagtgctctttttaataaaagttttcaagatatgtaagttaagtttgacgtgaccacgagacaaaagacaattttaggatgtt 49018531  T
Q  228 tgcaagcagtacattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattg 327  Q
    |||||||||||||| ||||  ||||||||||||||| ||  |||||||||||||||||||  ||||||| || ||||||||| | |||| || ||||| |    
T  49018530 tgcaagcagtacatgctcatgattttcttctagctatcctgattgatgggttaggtcagcgcatgtcacaagtggagtatcgaactatcattagatatcg 49018431  T
Q  328 tcttatgattccactat 344  Q
     ||||||||||||||||    
T  49018430 ccttatgattccactat 49018414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 158 - 391
Target Start/End: Complemental strand, 35236776 - 35236543
Alignment:
Q  158 agtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtttgcaagcagtacattctcaaaattttcttc 257  Q
    ||||||||| ||||||||||  ||||||||||||||| || ||||||||||||| |  |||| ||||||||||||| |||| ||  |||| |||||||||    
T  35236776 agtaaaattcttcaagatatgaaagttaagtttgacaggatcactagacagaagacggtttttggatgtttgcaagtagtatatgatcaagattttcttc 35236677  T
Q  258 tagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatgattccactatttcctattgatga 357  Q
     ||||  ||   ||||||| |||||||||||||||||||||| |||||| | || ||||||| ||||| |  |||||||   | ||||||||||||||||    
T  35236676 aagctgtcctggttgatggattaggtcagcatatgtcaccagtggagtaccatactatccttagatatcgctttatgatgttattatttcctattgatga 35236577  T
Q  358 ggtgtaccctgtttgtcgtaaggcgtgtctggat 391  Q
    ||||| | | || ||||||||   ||||||||||    
T  35236576 ggtgtgctccgtctgtcgtaacatgtgtctggat 35236543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 411 - 539
Target Start/End: Complemental strand, 3135426 - 3135298
Alignment:
Q  411 tatcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgtttgcggag 510  Q
    |||||||||||| |||||| |||||||||| |||||||| |||  ||||| |||| || |||||||||||||| ||| || ||| |||| ||||||||||    
T  3135426 tatcagagccccattcgacaaagggtacgaacgaggcagttggtccgtttacgcagaaagcagcaacggcggtacaaacagtgtcggtctgtttgcggag 3135327  T
Q  511 aaaccaacaacgacgatacaagcaagtaa 539  Q
    |||||| |||||||||||||| |||||||    
T  3135326 aaaccagcaacgacgatacaaacaagtaa 3135298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 542 - 630
Target Start/End: Complemental strand, 53572161 - 53572073
Alignment:
Q  542 gcttccagtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcatttc 630  Q
    |||||| ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||   ||||| ||||||||||||||||||    
T  53572161 gcttcctgtaacaccccgttacccaaaagcaataaaatagcatataaacatcagagtaatcccacaacgggcatgctacacgtcatttc 53572073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 51848449 - 51848530
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||   ||||| ||||||||||||||||||    
T  51848449 gtaacaccccgttacccaaaagcaataaaatagcatataaacatcagagtaatcccacaacgggcatgctacacgtcatttc 51848530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 549 - 628
Target Start/End: Original strand, 29492778 - 29492857
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcatt 628  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||   ||||| |||||||| |||||||    
T  29492778 gtaacaccccgttacccaaaagcaattaaatagcatataaacatcagagtaatcccacaacgggcatgctacgcgtcatt 29492857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 21351503 - 21351584
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcatttc 630  Q
    |||||| |||||||||||||| |||| ||||||||||||||||||||||||||||   ||||| ||||||||||||||||||    
T  21351503 gtaacatcccgttacccaaaagcaataaaatagcatataaacatcagagtaatcccacaacgggcatgctacacgtcatttc 21351584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 405 - 536
Target Start/End: Complemental strand, 33803230 - 33803099
Alignment:
Q  405 cagtgatatcagagccccg-ttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgtt 503  Q
    ||||| |||||||||| || |||||||||||||||||| ||||||||  |  ||||||||||||| ||||||||| | || |||||| ||| |||||| |    
T  33803230 cagtggtatcagagcctcgattcgacgaagggtacgactgaggcagccagtccgtttgcgcataaagcagcaacgacagtacaagcagtgtcggtccg-t 33803132  T
Q  504 tgcggagaaaccaacaacgacgatacaagcaag 536  Q
    ||||||||| ||| ||||| |||||||||||||    
T  33803131 tgcggagaagccagcaacggcgatacaagcaag 33803099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 456 - 547
Target Start/End: Original strand, 8328125 - 8328216
Alignment:
Q  456 cgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgtttgcggagaaaccaacaacgacgatacaagcaagtaagagcttcc 547  Q
    |||||||||| |  ||| |||||||| | |||||| ||| ||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  8328125 cgtttgcgcagagagcaacaacggcgatacaagcagtgtcggtccgtttgcggagaaaccagcaacggcgatacaagcaagtaagagcttcc 8328216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 549 - 621
Target Start/End: Original strand, 28758192 - 28758265
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||| | || ||||||| |||||||||    
T  28758192 gtaacaccccgttacccaaaagcaattaaatagcatataaacatcagagtatttcaccaaacgggcatgctaca 28758265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 54834050 - 54833970
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| |||||||||| ||  || ||||||||||||||||| ||||| ||||||||||||||||||    
T  54834050 gtaacaccccgttacccaaaagcaattaaataacaattatacatcagagtaatccac-aacgggcatgctacacgtcatttc 54833970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 549 - 628
Target Start/End: Original strand, 3107724 - 3107802
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcatt 628  Q
    ||||||||||||||||||||| |||| ||||||| ||||||||||||||||  |||| ||||| ||||||||||||||||    
T  3107724 gtaacaccccgttacccaaaagcaataaaatagcgtataaacatcagagtatcccac-aacgggcatgctacacgtcatt 3107802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 549 - 599
Target Start/End: Original strand, 28752025 - 28752075
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagta 599  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  28752025 gtaacaccccgttacccaaaagcaattaaatagcatataaacatcagagta 28752075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 284 - 391
Target Start/End: Original strand, 7501724 - 7501830
Alignment:
Q  284 cagcatatgtcaccagcggagtatcgtattatccttcgatattgtcttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgt 383  Q
    |||||||||||| ||| |||||| |||| ||||||| ||||| | ||||| ||||| ||||||| ||||||||||||||    |||||||||||| ||||    
T  7501724 cagcatatgtcatcagtggagtaccgtactatccttagatatcgccttataattcctctatttcatattgatgaggtgt-gtttgtttgtcgtaatgcgt 7501822  T
Q  384 gtctggat 391  Q
    ||||||||    
T  7501823 gtctggat 7501830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 472 - 547
Target Start/End: Original strand, 8328246 - 8328321
Alignment:
Q  472 agcaacggcggtgcaagcaatgttggtccgtttgcggagaaaccaacaacgacgatacaagcaagtaagagcttcc 547  Q
    |||||||||| | |||||| ||| | || ||||||||||||||||||||||  |||||||||||||||||||||||    
T  8328246 agcaacggcgatacaagcagtgtcgatcagtttgcggagaaaccaacaacggtgatacaagcaagtaagagcttcc 8328321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 21152323 - 21152243
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||||||| ||||| ||||| ||||||||| ||||||||    
T  21152323 gtaacaccccgttacccaaaagcaattaaatagca-atatacatcagagtaattccac-aacgggcatgctacatgtcatttc 21152243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 23866648 - 23866568
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||||||| ||||| ||||| ||||||||| ||||||||    
T  23866648 gtaacaccccgttacccaaaagcaattaaatagca-atatacatcagagtaattccac-aacgggcatgctacatgtcatttc 23866568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 621
Target Start/End: Complemental strand, 3554562 - 3554490
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctaca 621  Q
    ||||||||||||||||||||  |||| ||||| ||||||||||||||||||| ||||||||||| |||||||||    
T  3554562 gtaacaccccgttacccaaag-caataaaataacatataaacatcagagtaattccacaaacgggcatgctaca 3554490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 621
Target Start/End: Complemental strand, 3783645 - 3783572
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    |||||||||||||||||||||  ||| |||||||||||||||||||||||| | || ||||||| |||||||||    
T  3783645 gtaacaccccgttacccaaaaggaataaaatagcatataaacatcagagtattacaccaaacgggcatgctaca 3783572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 621
Target Start/End: Original strand, 17596033 - 17596106
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    |||||||||||| |||||||| |||| |||||||||||||||||||||||| | || ||||||| |||||||||    
T  17596033 gtaacaccccgtcacccaaaagcaataaaatagcatataaacatcagagtatttcaccaaacgggcatgctaca 17596106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 406 - 514
Target Start/End: Complemental strand, 41359741 - 41359632
Alignment:
Q  406 agtgatatcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgc-aagcaatgttggtccgttt 504  Q
    |||| ||||| |||||| |||||||||||||| || |||||||||  |  ||| ||||||||| |||||||| ||||| | ||||| ||| |||||||||    
T  41359741 agtggtatcatagccccattcgacgaagggtaagatcgaggcagccagtccgtctgcgcataaagcagcaacagcggtacaaagcagtgtcggtccgttt 41359642  T
Q  505 gcggagaaac 514  Q
    ||||||||||    
T  41359641 gcggagaaac 41359632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 423 - 547
Target Start/End: Complemental strand, 54018157 - 54018033
Alignment:
Q  423 gttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgtttgcggagaaaccaacaacg 522  Q
    |||| ||||||||| ||| ||||||||| ||  |||||||||| || ||||||| |||||| ||| |  |||  |||||||||||||||||||||||||     
T  54018157 gttcaacgaagggtgcgatcgaggcagccggtccgtttgcgcagaaagcagcaatggcggtacaaacg-tgtcagtccgtttgcggagaaaccaacaaca 54018059  T
Q  523 acgatacaagcaagt-aagagcttcc 547  Q
      ||||||||||||| ||||||||||    
T  54018058 gtgatacaagcaagtaaagagcttcc 54018033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 114 - 387
Target Start/End: Complemental strand, 43123843 - 43123563
Alignment:
Q  114 ccgtccctcctaaagcacaacatgttttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggc 213  Q
    ||||||||||||||| ||||||||| |||| |||||   || ||| ||||| ||||||| |||| ||| | ||||||||||||||||| | || |||  |    
T  43123843 ccgtccctcctaaagtacaacatgtattggtgagtgtcttttttaataaaagtgttcaacatattgaaataaagtttgacatgaccacaataccgaaaac 43123744  T
Q  214 aattttaggatgtttgcaagcagtacattctcaaaattttcttctagcta----gcccaattgatgggttaggtcagcatatgtcaccagcggagtatcg 309  Q
    | ||||||| |||||| |||||  |||| ||||||| |||| ||||| ||     |||  ||||||||||| ||| ||||||||||| ||| | ||| |     
T  43123743 atttttagg-tgtttgtaagcaacacatgctcaaaactttcctctagatacccctccctgttgatgggttacgtcggcatatgtcactagcagtgtacct 43123645  T
Q  310 ta----ttatccttcgatattgtcttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtgtct 387  Q
    ||     ||||||   |||| |||| || |||||| ||||| |||||||||||| ||  | ||||||||||||||| |||||    
T  43123644 tactacatatcctcatatatcgtctcattattccattattttctattgatgaggcgtgtcttgtttgtcgtaaggcatgtct 43123563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 45610950 - 45611031
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagta-atccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||| ||||| ||||||||||||| ||| |||||||||||  ||||| |||||  |||||||||||||||||    
T  45610950 gtaacaccccgttactcaaaagcaattaaatagcaaatatacatcagagtagttccac-aacgggtatgctacacgtcatttc 45611031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 503 - 548
Target Start/End: Complemental strand, 21832601 - 21832556
Alignment:
Q  503 ttgcggagaaaccaacaacgacgatacaagcaagtaagagcttcca 548  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||    
T  21832601 ttgcggagaaaccagcaacgacgatacaagcaagtatgagcttcca 21832556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 405 - 481
Target Start/End: Complemental strand, 37990954 - 37990878
Alignment:
Q  405 cagtgatatcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcg 481  Q
    ||||| |||||| ||||| |||||| |||||||||| ||||||||| || ||||||||||| ||  |||||||||||    
T  37990954 cagtggtatcagggccccattcgacaaagggtacgatcgaggcagccggttcgtttgcgcagaaaccagcaacggcg 37990878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 10767040 - 10767122
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagc-atataaacatcagagta-atccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| |||||||||| | | ||| |||||||||||  ||||| ||||| ||||||||||||||||||    
T  10767040 gtaacaccccgttacccaaaagcaattaaataacaaaatatacatcagagtagttccac-aacgggcatgctacacgtcatttc 10767122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 692 - 731
Target Start/End: Original strand, 29492921 - 29492960
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaa 731  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  29492921 atagcagcggaatagttttcagaatccatctcatcatgaa 29492960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 412 - 483
Target Start/End: Complemental strand, 32462870 - 32462799
Alignment:
Q  412 atcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggt 483  Q
    |||||||||  |||||||||||||||||||||  ||||  || ||||||||||| || ||||||||||||||    
T  32462870 atcagagcctagttcgacgaagggtacgaccggagcagtcggttcgtttgcgcagaaagcagcaacggcggt 32462799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 293 - 360
Target Start/End: Original strand, 52741121 - 52741188
Alignment:
Q  293 tcaccagcggagtatcgtattatccttcgatattgtcttatgattccactatttcctattgatgaggt 360  Q
    ||||||| |||||||| || ||||||| ||||   |||||||||||||||||||| ||||||||||||    
T  52741121 tcaccagtggagtatcatactatccttagataccatcttatgattccactatttcatattgatgaggt 52741188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 405 - 450
Target Start/End: Original strand, 22304375 - 22304421
Alignment:
Q  405 cagtgatatcagagccccg-ttcgacgaagggtacgaccgaggcagc 450  Q
    ||||| ||||||||||||| |||||||||||||||||||||||||||    
T  22304375 cagtggtatcagagccccggttcgacgaagggtacgaccgaggcagc 22304421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 54518741 - 54518822
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagta-atccacaaacggtcatgctacacgtcatttc 630  Q
    |||||||||||||||||||||||||||| ||| || |||  ||||||||||  ||||| ||||| |||| |||||||||||||    
T  54518741 gtaacaccccgttacccaaaaacaattatataacaaatattcatcagagtagttccac-aacgggcatgttacacgtcatttc 54518822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 622
Target Start/End: Original strand, 15374005 - 15374078
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacac 622  Q
    ||||||||| |||||||||||  |||||||||  | |||  |||||||||||| ||||||||| ||||||||||    
T  15374005 gtaacaccctgttacccaaaagtaattaaatataaaatattcatcagagtaattcacaaacgggcatgctacac 15374078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 406 - 450
Target Start/End: Complemental strand, 3135079 - 3135035
Alignment:
Q  406 agtgatatcagagccccgttcgacgaagggtacgaccgaggcagc 450  Q
    |||| ||||||||| ||||||||| ||||||||||||||||||||    
T  3135079 agtggtatcagagcaccgttcgacaaagggtacgaccgaggcagc 3135035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 549 - 601
Target Start/End: Complemental strand, 50656893 - 50656841
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaat 601  Q
    ||||||||||||||||| ||| |||| |||||||||| | |||||||||||||    
T  50656893 gtaacaccccgttacccgaaagcaataaaatagcataaatacatcagagtaat 50656841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 549 - 601
Target Start/End: Complemental strand, 51854637 - 51854585
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaat 601  Q
    ||||||||||||||||||||| || | |||||||||| | |||||||||||||    
T  51854637 gtaacaccccgttacccaaaagcagtaaaatagcataaatacatcagagtaat 51854585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 405 - 440
Target Start/End: Original strand, 52634855 - 52634890
Alignment:
Q  405 cagtgatatcagagccccgttcgacgaagggtacga 440  Q
    |||||||||||||||||| |||||||||||||||||    
T  52634855 cagtgatatcagagcccccttcgacgaagggtacga 52634890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 311 - 389
Target Start/End: Complemental strand, 37992811 - 37992733
Alignment:
Q  311 attatccttcgatattgtcttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtgtctgg 389  Q
    ||||||||| ||||| | ||||||||| || ||| ||  ||||||||||||| | |||||||||||||| ||| |||||    
T  37992811 attatccttagatatcgccttatgatttcaatatatctaattgatgaggtgtgctctgtttgtcgtaagacgtatctgg 37992733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 3107863 - 3107904
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaaca 733  Q
    |||||||||||||||||||||||||||||  | |||||||||    
T  3107863 atagcagcggaatagttttcaaaatccataacctcatgaaca 3107904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 598
Target Start/End: Complemental strand, 9772757 - 9772708
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagt 598  Q
    ||||||||||||||||||||| |||||||||| || |||  |||||||||    
T  9772757 gtaacaccccgttacccaaaagcaattaaataacaaatattcatcagagt 9772708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 10767182 - 10767223
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaaca 733  Q
    |||||||||||||||||||||||||||||  | |||||||||    
T  10767182 atagcagcggaatagttttcaaaatccataacctcatgaaca 10767223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 21351643 - 21351684
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaaca 733  Q
    |||||||||||||||||||||||||||||  | |||||||||    
T  21351643 atagcagcggaatagttttcaaaatccataacctcatgaaca 21351684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 621
Target Start/End: Complemental strand, 21452664 - 21452591
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    ||||||||| || |||||||| |||||||||| || |||| |||||||||||| || |||||||  ||||||||    
T  21452664 gtaacacccggtcacccaaaagcaattaaataacaaataatcatcagagtaattcaccaaacgggtatgctaca 21452591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 621
Target Start/End: Complemental strand, 21457838 - 21457765
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    ||||||||| || |||||||| |||||||||| || |||| |||||||||||| || |||||||  ||||||||    
T  21457838 gtaacacccggtcacccaaaagcaattaaataacaaataatcatcagagtaattcaccaaacgggtatgctaca 21457765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Original strand, 45611091 - 45611132
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaaca 733  Q
    |||||||||||||||||||||||||||||  | |||||||||    
T  45611091 atagcagcggaatagttttcaaaatccataacctcatgaaca 45611132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 53572014 - 53571973
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaaca 733  Q
    |||||||||||||||||||||||||||||  | |||||||||    
T  53572014 atagcagcggaatagttttcaaaatccataacctcatgaaca 53571973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 139; Significance: 2e-72; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 28 - 391
Target Start/End: Complemental strand, 20503 - 20136
Alignment:
Q  28 tatggactcaaattttgataatgctttggatggtcttcgcggaacgatttcagattttgacgttagtagttttacctgcaaggacaccgtccctcctaaa 127  Q
    |||||||||| |||||||||||| |||  ||||||||||  |  | ||||||||||||||| |||  | |||||| ||||| ||| ||||| ||||||||    
T  20503 tatggactcagattttgataatgttttttatggtcttcgtagtgcaatttcagattttgacattaacaattttacttgcaaagactccgtctctcctaaa 20404  T
Q  128 gcacaacatgttttggcgagtgctcttcttagtaaaattgttcaagatatagaagttaagtttgacatgaccactagacagaaggcaattttaggatgtt 227  Q
    ||||||||||||||||||| ||| ||| ||| ||||| ||||||||||||  |||||||||||||||||||||||||||||||| || ||||||  ||||    
T  20403 gcacaacatgttttggcgaatgccctttttaataaaagtgttcaagatatgaaagttaagtttgacatgaccactagacagaagacagttttagagtgtt 20304  T
Q  228 tgcaagca----gtacattctcaaaattttcttctagctagcccaattgatgggttaggtcagcatatgtcaccagcggagtatcgtattatccttcgat 323  Q
    |||| |||     | ||| ||||  |||||||| |||||| ||||||||||||||||||||| ||||||||| ||  ||||||| ||  ||||||| |||    
T  20303 tgcatgcaacacatgcatgctcaggattttcttgtagctatcccaattgatgggttaggtcaacatatgtcaacattggagtatggtgctatccttagat 20204  T
Q  324 attgtcttatgattccactatttcctattgatgaggtgtaccctgtttgtcgtaaggcgtgtctggat 391  Q
    ||   ||||||||| || ||||||||||||||||||||| |||| |||||| ||||||||| ||||||    
T  20203 atcaccttatgattacattatttcctattgatgaggtgtgccctttttgtcataaggcgtgcctggat 20136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 82; Significance: 2e-38; HSPs: 3)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 411 - 547
Target Start/End: Complemental strand, 1461 - 1324
Alignment:
Q  411 tatcagagccccg-ttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgtttgcgga 509  Q
    ||||||||||||| |||||||||||||| |||||||||||| ||  |||||| ||| || |||||||||||||| |||| | ||| ||||||||||||||    
T  1461 tatcagagccccggttcgacgaagggtatgaccgaggcagccggtccgtttgtgcagaaagcagcaacggcggtacaagtagtgtcggtccgtttgcgga 1362  T
Q  510 gaaaccaacaacgacgatacaagcaagtaagagcttcc 547  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  1361 gaaaccagcaacgacgatacaagcaagtaagagcttcc 1324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 405 - 545
Target Start/End: Complemental strand, 1661 - 1518
Alignment:
Q  405 cagtgatatcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaa--tgttggtccgt 502  Q
    ||||| |||||||||| |||||||| |||||||| ||||||||||||||  |||||||||| || ||||| | |||||| | || ||  ||| |||||||    
T  1661 cagtggtatcagagcctcgttcgacaaagggtacaaccgaggcagctggtccgtttgcgcagaaagcagc-atggcggtacgagtaaagtgtaggtccgt 1563  T
Q  503 ttgcggagaaaccaacaacg--acgatacaagcaagtaagagctt 545  Q
    |||||||||||||| |||||    ||||||||||||||| |||||    
T  1562 ttgcggagaaaccagcaacgttgtgatacaagcaagtaaaagctt 1518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 428 - 547
Target Start/End: Complemental strand, 3323 - 3203
Alignment:
Q  428 acgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgtttgcggagaaaccaacaacgacgat 527  Q
    ||||||||||||||| ||||||  ||  ||||||| || || ||||||| |||||  ||| || | |  |||||||||||||||| ||||||||| ||||    
T  3323 acgaagggtacgaccaaggcagtcggtccgtttgcacaaaaagcagcaatggcgggacaaacagtatcagtccgtttgcggagaacccaacaacggcgat 3224  T
Q  528 ac-aagcaagtaagagcttcc 547  Q
    || || |||||||||||||||    
T  3223 acaaatcaagtaagagcttcc 3203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0654 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0654
Description:

Target: scaffold0654; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 549 - 621
Target Start/End: Original strand, 8537 - 8610
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctaca 621  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| | || ||||||| |||||||||    
T  8537 gtaacaccccgttacccaaaaacaatttaatagcatataaacatcagagtatttcaccaaacgggcatgctaca 8610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 550 - 626
Target Start/End: Complemental strand, 13085 - 13008
Alignment:
Q  550 taacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtca 626  Q
    |||||||||||||||||||| ||||||||||||| ||| |||||||||||| |||||| |||| ||||||||||||||    
T  13085 taacaccccgttacccaaaagcaattaaatagcaaatatacatcagagtaattccacatacgggcatgctacacgtca 13008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 556 - 629
Target Start/End: Complemental strand, 33534 - 33462
Alignment:
Q  556 cccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcattt 629  Q
    ||||||||||||||||||||||||| ||| || ||||||||||||||||| ||||| |||||||||||||||||    
T  33534 cccgttacccaaaaacaattaaataacatttatacatcagagtaatccac-aacgggcatgctacacgtcattt 33462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 549 - 626
Target Start/End: Original strand, 63951 - 64027
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtca 626  Q
    ||||||||||||||||||||| |||||||||| ||| || ||||||||||||||||||||||| |||| |||||||||    
T  63951 gtaacaccccgttacccaaaagcaattaaataacatttatacatcagagtaatccacaaacgg-catgttacacgtca 64027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 549 - 629
Target Start/End: Complemental strand, 16869 - 16790
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcattt 629  Q
    |||||||||||||||||||||||||||||||| ||| || ||| ||||||||| ||| ||||| |||||||||||||||||    
T  16869 gtaacaccccgttacccaaaaacaattaaataacatttatacaacagagtaattcac-aacgggcatgctacacgtcattt 16790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 406 - 547
Target Start/End: Original strand, 5577 - 5718
Alignment:
Q  406 agtgatatcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagcaatgttggtccgtttg 505  Q
    |||| ||||||||||  ||||||||||||||  || | ||||||  ||  |||||||||| || ||||||||||||||||||||| ||| ||||||||||    
T  5577 agtggtatcagagcct-gttcgacgaagggtgtgatccaggcagtcggtccgtttgcgcagaaagcagcaacggcggtgcaagcagtgtcggtccgtttg 5675  T
Q  506 cggagaaaccaacaacgacgatacaagc-aagtaagagcttcc 547  Q
    | |||||||||  |||| ||| ||| || ||||||||||||||    
T  5676 cagagaaaccagtaacggcgacacatgcaaagtaagagcttcc 5718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 31156 - 31075
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagta-atccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||||||  ||||| ||||| ||||||||||||||||||    
T  31156 gtaacaccccgttacccaaaagcaattaaatagcaaatatacatcagagtagttccac-aacgggcatgctacacgtcatttc 31075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 19380 - 19299
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaat-ccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||| ||||| ||||||||||||| ||| ||||||||||||| |||||| ||| ||||||||||||||||||    
T  19380 gtaacaccccgttactcaaaagcaattaaatagcaaatatacatcagagtaattccacaa-cgggcatgctacacgtcatttc 19299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 692 - 733
Target Start/End: Complemental strand, 19239 - 19198
Alignment:
Q  692 atagcagcggaatagttttcaaaatccatctcatcatgaaca 733  Q
    |||||||||||||||||||||||||||||  | |||||||||    
T  19239 atagcagcggaatagttttcaaaatccataacctcatgaaca 19198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 10508 - 10589
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| |||||||||| || |||  ||||||||||||||   ||||| ||||||||||||||||||    
T  10508 gtaacaccccgttacccaaaagcaattaaataacaaatattcatcagagtaatcccacaacgggcatgctacacgtcatttc 10589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 549 - 629
Target Start/End: Complemental strand, 10993 - 10913
Alignment:
Q  549 gtaacaccccgttacccaaaaa-caattaaatagcatataaacatcagagtaatccacaaacggtcatgctacacgtcattt 629  Q
    |||||||||||||||||||||| |||||||||| ||| || ||||||||||||||||| ||||| |||||||||| ||||||    
T  10993 gtaacaccccgttacccaaaaatcaattaaataacatttatacatcagagtaatccac-aacgggcatgctacacatcattt 10913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2150 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold2150
Description:

Target: scaffold2150; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 549 - 630
Target Start/End: Original strand, 860 - 940
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa-tccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| ||||||||||||| ||| |||||||||||| ||||| ||||| ||||||||| ||||||||    
T  860 gtaacaccccgttacccaaaagcaattaaatagca-atatacatcagagtaattccac-aacggacatgctacatgtcatttc 940  T

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Target: scaffold0102 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 13045 - 12964
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaat-ccacaaacggtcatgctacacgtcatttc 630  Q
    ||||||||||||||||||||| |||||||||| || |||  |||||||||||| |||||| ||| ||||||||||||||||||    
T  13045 gtaacaccccgttacccaaaagcaattaaataacaaatattcatcagagtaattccacaa-cgggcatgctacacgtcatttc 12964  T

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Target: scaffold0088 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 549 - 622
Target Start/End: Original strand, 31184 - 31258
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctacac 622  Q
    ||||||||||||||||||||| |||||||||| || |||  |||||||||||| || ||||||| ||||||||||    
T  31184 gtaacaccccgttacccaaaagcaattaaataacaaatattcatcagagtaattcaccaaacgggcatgctacac 31258  T

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Target: scaffold0078 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 412 - 490
Target Start/End: Original strand, 5170 - 5246
Alignment:
Q  412 atcagagccccgttcgacgaagggtacgaccgaggcagctggctcgtttgcgcataaggcagcaacggcggtgcaagca 490  Q
    |||| |||||||||||||||| ||||||| |||||||||||| ||| ||||||| || |||||||||||||| ||||||    
T  5170 atcacagccccgttcgacgaaaggtacgatcgaggcagctgg-tcg-ttgcgcagaaagcagcaacggcggtacaagca 5246  T

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Target: scaffold0041 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 549 - 601
Target Start/End: Original strand, 49263 - 49315
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaat 601  Q
    ||||||||||||||||||||| |||| |||||||||| | |||||||||||||    
T  49263 gtaacaccccgttacccaaaagcaataaaatagcataaatacatcagagtaat 49315  T

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Target: scaffold0191 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 622
Target Start/End: Original strand, 6205 - 6279
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctacac 622  Q
    ||||||||||| ||||||||||||||||||||  | |||  |||||||||||| || ||||||| ||||||||||    
T  6205 gtaacaccccgctacccaaaaacaattaaatataaaatattcatcagagtaattcaccaaacgggcatgctacac 6279  T

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Target: scaffold0154 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 630
Target Start/End: Complemental strand, 19268 - 19187
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagta-atccacaaacggtcatgctacacgtcatttc 630  Q
    |||||||||||||||||||||||||||| ||| || |||  ||||||||||  ||||| ||||| |||| |||||||||||||    
T  19268 gtaacaccccgttacccaaaaacaattatataacaaatattcatcagagtagttccac-aacgggcatgttacacgtcatttc 19187  T

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Target: scaffold0106 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 599
Target Start/End: Original strand, 28108 - 28158
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagta 599  Q
    |||||||||||||| || |||||||||||||| || |||||||||||||||    
T  28108 gtaacaccccgttatcccaaaacaattaaataacaaataaacatcagagta 28158  T

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Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 599
Target Start/End: Complemental strand, 57544 - 57494
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagta 599  Q
    |||||||||||||| || |||||||||||||| || |||||||||||||||    
T  57544 gtaacaccccgttatcccaaaacaattaaataacaaataaacatcagagta 57494  T

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Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 600
Target Start/End: Original strand, 146408 - 146459
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaa 600  Q
    ||||||||||||||| ||||| ||||||||||  |||||| |||||||||||    
T  146408 gtaacaccccgttacacaaaagcaattaaataatatataatcatcagagtaa 146459  T

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Target: scaffold0606 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0606
Description:

Target: scaffold0606; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 549 - 601
Target Start/End: Complemental strand, 486 - 434
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaat 601  Q
    ||||||||||||||||||||| || | |||||||||| | |||||||||||||    
T  486 gtaacaccccgttacccaaaagcagtaaaatagcataaatacatcagagtaat 434  T

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Target: scaffold0062 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 549 - 585
Target Start/End: Complemental strand, 9262 - 9226
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcata 585  Q
    ||||||||||||||||||||| |||||||||||||||    
T  9262 gtaacaccccgttacccaaaagcaattaaatagcata 9226  T

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Target: scaffold0560 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0560
Description:

Target: scaffold0560; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 619
Target Start/End: Complemental strand, 1863 - 1792
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgcta 619  Q
    ||||||||||||||||||||| |||||||||| || | |  |||||||||||| || ||||||| |||||||    
T  1863 gtaacaccccgttacccaaaagcaattaaataacaaacattcatcagagtaattcaccaaacgggcatgcta 1792  T

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Target: scaffold0192 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 549 - 580
Target Start/End: Original strand, 5990 - 6021
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaata 580  Q
    ||||||||||||||||||||||||||||||||    
T  5990 gtaacaccccgttacccaaaaacaattaaata 6021  T

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Target: scaffold0363 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 549 - 622
Target Start/End: Original strand, 1337 - 1411
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagagtaatcca-caaacggtcatgctacac 622  Q
    |||||||||||||||||||||  |||||||||  | |||  |||||||||||| || ||||||| ||||||||||    
T  1337 gtaacaccccgttacccaaaagtaattaaatataaaatattcatcagagtaattcaccaaacgggcatgctacac 1411  T

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Target: scaffold0310 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 549 - 622
Target Start/End: Original strand, 7038 - 7112
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagag-taatccacaaacggtcatgctacac 622  Q
    |||||||||||||||||||||  |||||||||  | ||||||||||||| ||| |  ||||||| ||||||||||    
T  7038 gtaacaccccgttacccaaaagtaattaaatataacataaacatcagagttaagcaccaaacgggcatgctacac 7112  T

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Target: scaffold0395 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 550 - 599
Target Start/End: Complemental strand, 4885 - 4836
Alignment:
Q  550 taacaccccgttacccaaaaacaattaaatagcatataaacatcagagta 599  Q
    ||||||||||||| || ||| |||||||||| || |||||||||||||||    
T  4885 taacaccccgttatcccaaagcaattaaataacaaataaacatcagagta 4836  T

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Target: scaffold0320 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 621
Target Start/End: Original strand, 201 - 274
Alignment:
Q  549 gtaacaccccgttacccaaaaacaattaaatagcatataaacatcagag-taatccacaaacggtcatgctaca 621  Q
    ||||||||||||||||||||| |||||||||| ||  ||  |||||||| |||||  ||||||| |||||||||    
T  201 gtaacaccccgttacccaaaagcaattaaataacaattattcatcagagttaatcaccaaacgggcatgctaca 274  T

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