View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5213_low_25 (Length: 338)

Name: NF5213_low_25
Description: NF5213
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5213_low_25
NF5213_low_25
[»] chr6 (31 HSPs)
chr6 (8-320)||(22010520-22010833)
chr6 (8-320)||(11856920-11857236)
chr6 (11-320)||(14737403-14737712)
chr6 (11-320)||(14742263-14742572)
chr6 (25-320)||(28184452-28184751)
chr6 (25-285)||(28155412-28155671)
chr6 (25-307)||(6438461-6438743)
chr6 (38-278)||(16838734-16838977)
chr6 (38-305)||(6005379-6005650)
chr6 (38-268)||(33330297-33330529)
chr6 (38-268)||(33335794-33336026)
chr6 (89-267)||(5674685-5674865)
chr6 (11-89)||(5674554-5674633)
chr6 (173-268)||(5757478-5757575)
chr6 (173-268)||(21356036-21356133)
chr6 (89-246)||(22709041-22709188)
chr6 (173-268)||(5572240-5572338)
chr6 (184-268)||(10077176-10077262)
chr6 (173-268)||(31086472-31086570)
chr6 (184-268)||(4629954-4630040)
chr6 (173-256)||(21801343-21801429)
chr6 (173-268)||(31979513-31979611)
chr6 (173-247)||(18232867-18232943)
chr6 (173-268)||(22963700-22963797)
chr6 (173-268)||(23824596-23824693)
chr6 (223-278)||(5343471-5343527)
chr6 (186-268)||(5017482-5017566)
chr6 (205-268)||(31936587-31936651)
chr6 (27-89)||(5017304-5017364)
chr6 (27-87)||(22709241-22709299)
chr6 (205-264)||(12195515-12195575)
[»] chr3 (70 HSPs)
chr3 (8-320)||(22173018-22173331)
chr3 (89-290)||(28503780-28503982)
chr3 (25-268)||(18656436-18656677)
chr3 (89-290)||(7167223-7167425)
chr3 (92-320)||(8738982-8739210)
chr3 (92-320)||(9091220-9091448)
chr3 (89-320)||(40372712-40372942)
chr3 (89-320)||(2671502-2671733)
chr3 (38-268)||(2676939-2677171)
chr3 (38-268)||(2672783-2673015)
chr3 (89-225)||(28501613-28501750)
chr3 (38-283)||(8512202-8512450)
chr3 (38-283)||(8517082-8517330)
chr3 (89-290)||(8477340-8477545)
chr3 (38-278)||(24968097-24968340)
chr3 (89-268)||(26928507-26928687)
chr3 (89-290)||(32143299-32143501)
chr3 (89-290)||(1305927-1306128)
chr3 (38-305)||(32475446-32475717)
chr3 (38-305)||(32480304-32480575)
chr3 (89-268)||(27452958-27453138)
chr3 (10-89)||(8738846-8738926)
chr3 (114-268)||(27974884-27975039)
chr3 (11-89)||(2671370-2671449)
chr3 (11-89)||(40372580-40372659)
chr3 (27-89)||(8477598-8477660)
chr3 (31-89)||(28501502-28501560)
chr3 (27-89)||(28503665-28503727)
chr3 (173-268)||(8370476-8370573)
chr3 (11-89)||(7167478-7167558)
chr3 (11-89)||(9091085-9091164)
chr3 (173-268)||(18552872-18552970)
chr3 (91-247)||(6794623-6794778)
chr3 (173-268)||(16264350-16264447)
chr3 (173-268)||(21711223-21711320)
chr3 (173-267)||(36029094-36029191)
chr3 (186-268)||(27986449-27986533)
chr3 (173-265)||(1736294-1736389)
chr3 (173-268)||(30709779-30709877)
chr3 (186-268)||(33386669-33386753)
chr3 (173-247)||(48438236-48438312)
chr3 (173-268)||(3715991-3716089)
chr3 (173-268)||(40592771-40592869)
chr3 (173-268)||(25795781-25795879)
chr3 (173-268)||(26298988-26299086)
chr3 (29-89)||(1306179-1306239)
chr3 (186-268)||(1417493-1417577)
chr3 (220-268)||(10207935-10207983)
chr3 (173-268)||(47923895-47923993)
chr3 (173-268)||(37466291-37466388)
chr3 (186-268)||(39039995-39040079)
chr3 (173-247)||(40844674-40844749)
chr3 (173-268)||(3328346-3328443)
chr3 (202-243)||(4386947-4386988)
chr3 (27-86)||(4386774-4386831)
chr3 (173-247)||(3323680-3323755)
chr3 (27-89)||(23392106-23392166)
chr3 (27-89)||(24694963-24695023)
chr3 (27-89)||(26928396-26928456)
chr3 (27-89)||(27986253-27986313)
chr3 (27-89)||(36029322-36029382)
chr3 (27-89)||(40592579-40592639)
chr3 (10-86)||(23410529-23410604)
chr3 (173-268)||(24695153-24695251)
chr3 (201-238)||(53894082-53894119)
chr3 (27-86)||(21711454-21711511)
chr3 (11-89)||(33386455-33386532)
chr3 (205-264)||(38210569-38210629)
chr3 (30-89)||(47923704-47923761)
chr3 (205-264)||(50494198-50494258)
[»] chr8 (52 HSPs)
chr8 (8-307)||(7289749-7290049)
chr8 (25-285)||(25328120-25328379)
chr8 (89-290)||(6311276-6311477)
chr8 (25-320)||(39784665-39784961)
chr8 (89-320)||(36979327-36979558)
chr8 (90-320)||(33037724-33037953)
chr8 (89-320)||(18853083-18853315)
chr8 (89-320)||(18870477-18870709)
chr8 (89-279)||(30655636-30655827)
chr8 (89-320)||(10689058-10689290)
chr8 (38-305)||(35745353-35745624)
chr8 (89-290)||(4759991-4760193)
chr8 (38-305)||(10684116-10684388)
chr8 (89-290)||(1261871-1262073)
chr8 (89-290)||(31071146-31071349)
chr8 (186-290)||(26287879-26287985)
chr8 (186-290)||(26301136-26301242)
chr8 (186-290)||(26313130-26313236)
chr8 (25-101)||(25327994-25328070)
chr8 (8-89)||(6311532-6311614)
chr8 (11-89)||(18870345-18870424)
chr8 (11-89)||(30655880-30655959)
chr8 (11-89)||(10688924-10689003)
chr8 (11-89)||(18852951-18853030)
chr8 (173-247)||(4456050-4456125)
chr8 (183-268)||(26403240-26403327)
chr8 (11-89)||(33037592-33037671)
chr8 (27-89)||(1261758-1261820)
chr8 (114-268)||(19175696-19175851)
chr8 (173-265)||(7412344-7412438)
chr8 (27-89)||(4759875-4759938)
chr8 (173-268)||(23799576-23799674)
chr8 (27-89)||(36979611-36979672)
chr8 (186-268)||(4696609-4696693)
chr8 (173-247)||(6127243-6127319)
chr8 (173-268)||(5702482-5702580)
chr8 (205-266)||(9765852-9765914)
chr8 (29-89)||(31071035-31071095)
chr8 (27-89)||(26288121-26288183)
chr8 (27-89)||(26301378-26301440)
chr8 (27-89)||(26313372-26313434)
chr8 (173-268)||(19752394-19752491)
chr8 (27-89)||(7412569-7412629)
chr8 (27-89)||(4696416-4696476)
chr8 (205-238)||(18810982-18811015)
chr8 (89-162)||(26287999-26288070)
chr8 (89-162)||(26301256-26301327)
chr8 (89-162)||(26313250-26313321)
chr8 (173-247)||(9054836-9054912)
chr8 (27-86)||(23799384-23799441)
chr8 (205-264)||(43079877-43079937)
chr8 (205-264)||(43082248-43082308)
[»] chr5 (51 HSPs)
chr5 (8-320)||(43592227-43592541)
chr5 (8-320)||(27449762-27450076)
chr5 (8-320)||(43598672-43598986)
chr5 (8-320)||(43604164-43604478)
chr5 (8-320)||(43609656-43609970)
chr5 (8-290)||(1456985-1457268)
chr5 (8-320)||(27444918-27445232)
chr5 (8-320)||(15044634-15044948)
chr5 (38-307)||(28807429-28807697)
chr5 (90-290)||(30631385-30631586)
chr5 (89-290)||(31180193-31180394)
chr5 (38-285)||(37556478-37556724)
chr5 (38-285)||(37561300-37561546)
chr5 (38-305)||(2785337-2785608)
chr5 (38-305)||(33791278-33791549)
chr5 (89-307)||(24135809-24136028)
chr5 (89-290)||(38192151-38192353)
chr5 (89-290)||(38219376-38219578)
chr5 (38-278)||(31396843-31397088)
chr5 (89-290)||(35387640-35387842)
chr5 (38-278)||(31401700-31401945)
chr5 (135-278)||(33768169-33768314)
chr5 (11-89)||(30631640-30631719)
chr5 (11-89)||(31180447-31180526)
chr5 (89-268)||(15464532-15464712)
chr5 (173-268)||(9353332-9353429)
chr5 (173-268)||(36932350-36932447)
chr5 (11-89)||(24136080-24136159)
chr5 (173-268)||(10281751-10281849)
chr5 (27-89)||(35387893-35387955)
chr5 (173-267)||(11916971-11917068)
chr5 (173-268)||(14520230-14520327)
chr5 (173-247)||(3880321-3880397)
chr5 (183-268)||(17003970-17004057)
chr5 (173-265)||(12084175-12084269)
chr5 (173-268)||(19588746-19588844)
chr5 (27-89)||(38219629-38219691)
chr5 (173-268)||(28832259-28832356)
chr5 (173-268)||(42127410-42127507)
chr5 (205-264)||(4410241-4410301)
chr5 (27-89)||(24553335-24553395)
chr5 (28-89)||(11181641-11181700)
chr5 (27-87)||(7160712-7160770)
chr5 (27-87)||(14520461-14520519)
chr5 (29-89)||(28832486-28832544)
chr5 (189-268)||(31300612-31300693)
chr5 (38-88)||(33768365-33768417)
chr5 (205-264)||(15552464-15552524)
chr5 (205-264)||(31179371-31179431)
chr5 (205-264)||(31542953-31543013)
chr5 (205-264)||(31545299-31545359)
[»] chr7 (50 HSPs)
chr7 (8-320)||(12396860-12397173)
chr7 (25-320)||(12406280-12406575)
chr7 (8-320)||(31109406-31109721)
chr7 (8-307)||(24024150-24024451)
chr7 (38-307)||(19992273-19992544)
chr7 (89-320)||(20357463-20357694)
chr7 (89-308)||(2057926-2058147)
chr7 (179-321)||(4866678-4866820)
chr7 (38-285)||(21812092-21812340)
chr7 (89-290)||(21639786-21639988)
chr7 (38-283)||(24266054-24266302)
chr7 (89-290)||(1533359-1533563)
chr7 (89-290)||(21645984-21646186)
chr7 (89-268)||(18408764-18408943)
chr7 (38-305)||(24261175-24261447)
chr7 (89-268)||(18413641-18413819)
chr7 (38-305)||(16884890-16885162)
chr7 (38-305)||(16880034-16880306)
chr7 (11-87)||(4873310-4873387)
chr7 (11-89)||(20357331-20357410)
chr7 (11-89)||(1533228-1533307)
chr7 (11-89)||(2058202-2058281)
chr7 (91-268)||(29159803-29159982)
chr7 (184-267)||(21983285-21983370)
chr7 (173-268)||(46516309-46516407)
chr7 (173-268)||(49091661-49091759)
chr7 (173-268)||(44848684-44848781)
chr7 (173-268)||(2647695-2647793)
chr7 (27-89)||(21640039-21640101)
chr7 (27-89)||(21646237-21646299)
chr7 (173-268)||(33332449-33332547)
chr7 (173-268)||(9190008-9190105)
chr7 (173-268)||(20284089-20284186)
chr7 (173-268)||(55948-56045)
chr7 (27-89)||(18408993-18409055)
chr7 (173-268)||(2580390-2580487)
chr7 (27-89)||(18413869-18413931)
chr7 (185-246)||(35960839-35960901)
chr7 (186-268)||(9185178-9185262)
chr7 (173-268)||(4796666-4796764)
chr7 (205-247)||(28617258-28617300)
chr7 (189-268)||(47263678-47263757)
chr7 (185-268)||(2479337-2479421)
chr7 (27-89)||(20284318-20284378)
chr7 (27-89)||(23402821-23402881)
chr7 (28-89)||(4796477-4796536)
chr7 (184-267)||(21988909-21988992)
chr7 (27-87)||(44847933-44847991)
chr7 (30-89)||(21989137-21989194)
chr7 (205-264)||(31155911-31155971)
[»] chr4 (46 HSPs)
chr4 (8-320)||(9224230-9224543)
chr4 (8-320)||(9229017-9229330)
chr4 (12-320)||(51520405-51520715)
chr4 (25-320)||(45347658-45347955)
chr4 (25-320)||(45357138-45357434)
chr4 (25-290)||(3814002-3814266)
chr4 (25-268)||(5732666-5732907)
chr4 (89-320)||(24741890-24742121)
chr4 (137-320)||(56146664-56146848)
chr4 (38-307)||(18855687-18855956)
chr4 (91-314)||(29760597-29760821)
chr4 (8-95)||(18712589-18712677)
chr4 (89-290)||(31985552-31985752)
chr4 (186-290)||(28468542-28468647)
chr4 (11-89)||(24742174-24742253)
chr4 (173-268)||(10047379-10047477)
chr4 (173-268)||(39245994-39246092)
chr4 (173-268)||(36315229-36315326)
chr4 (173-268)||(36329438-36329535)
chr4 (11-89)||(29760874-29760954)
chr4 (173-268)||(16623292-16623390)
chr4 (173-268)||(5396671-5396768)
chr4 (183-268)||(38152449-38152536)
chr4 (173-268)||(3796518-3796616)
chr4 (184-267)||(5143260-5143345)
chr4 (186-268)||(5269204-5269288)
chr4 (184-267)||(5147678-5147763)
chr4 (183-247)||(24333831-24333896)
chr4 (173-267)||(3777550-3777646)
chr4 (173-247)||(16630679-16630755)
chr4 (183-263)||(6743425-6743507)
chr4 (89-140)||(28468455-28468506)
chr4 (27-89)||(28468342-28468404)
chr4 (30-89)||(5112466-5112523)
chr4 (173-247)||(39774304-39774380)
chr4 (27-89)||(3777778-3777838)
chr4 (27-89)||(5396479-5396539)
chr4 (27-89)||(16623101-16623161)
chr4 (27-89)||(16628680-16628740)
chr4 (27-87)||(5269008-5269066)
chr4 (30-89)||(6743226-6743283)
chr4 (205-264)||(16931789-16931849)
chr4 (205-264)||(16934143-16934203)
chr4 (205-264)||(22780373-22780433)
chr4 (27-86)||(25861841-25861898)
chr4 (205-264)||(44599838-44599898)
[»] scaffold0135 (1 HSPs)
scaffold0135 (8-320)||(34885-35198)
[»] chr2 (53 HSPs)
chr2 (8-320)||(39811811-39812125)
chr2 (123-320)||(44312563-44312760)
chr2 (25-291)||(32246765-32247031)
chr2 (89-320)||(11098843-11099074)
chr2 (89-320)||(14291438-14291669)
chr2 (38-305)||(19344382-19344655)
chr2 (38-305)||(19349240-19349513)
chr2 (89-320)||(9296317-9296548)
chr2 (89-290)||(3491729-3491930)
chr2 (89-290)||(25398473-25398675)
chr2 (89-290)||(25403611-25403813)
chr2 (89-238)||(25407653-25407802)
chr2 (89-290)||(40738822-40739012)
chr2 (183-268)||(8040060-8040147)
chr2 (11-89)||(11098711-11098790)
chr2 (91-265)||(13569331-13569506)
chr2 (173-268)||(21629944-21630041)
chr2 (173-268)||(28259177-28259274)
chr2 (11-89)||(9296186-9296265)
chr2 (11-89)||(14291722-14291801)
chr2 (173-268)||(10445443-10445541)
chr2 (173-268)||(17865203-17865301)
chr2 (173-268)||(20522220-20522318)
chr2 (173-268)||(34682333-34682431)
chr2 (173-267)||(34388859-34388956)
chr2 (173-268)||(14699007-14699104)
chr2 (27-89)||(25409860-25409922)
chr2 (173-267)||(10707251-10707348)
chr2 (173-265)||(8390149-8390244)
chr2 (183-246)||(31056067-31056131)
chr2 (173-247)||(42039669-42039744)
chr2 (27-89)||(3491981-3492043)
chr2 (184-268)||(33118136-33118222)
chr2 (173-268)||(33528620-33528718)
chr2 (173-268)||(39482931-39483029)
chr2 (173-268)||(23078470-23078567)
chr2 (183-268)||(16940219-16940306)
chr2 (183-268)||(17010884-17010971)
chr2 (185-268)||(36757774-36757859)
chr2 (185-247)||(27149306-27149369)
chr2 (27-89)||(36757570-36757630)
chr2 (27-89)||(39483162-39483222)
chr2 (27-89)||(40739063-40739123)
chr2 (205-278)||(2838063-2838136)
chr2 (205-265)||(1345574-1345635)
chr2 (29-89)||(21630174-21630232)
chr2 (173-247)||(2869692-2869768)
chr2 (27-67)||(20522471-20522511)
chr2 (26-89)||(23078278-23078339)
chr2 (26-89)||(29867780-29867840)
chr2 (205-264)||(35215586-35215646)
chr2 (205-264)||(35217963-35218023)
chr2 (27-89)||(41586358-41586419)
[»] chr1 (43 HSPs)
chr1 (8-289)||(41398216-41398498)
chr1 (8-289)||(41390561-41390843)
chr1 (25-307)||(25444931-25445214)
chr1 (25-307)||(39445460-39445742)
chr1 (89-320)||(24787280-24787511)
chr1 (25-285)||(44023716-44023975)
chr1 (25-307)||(1054854-1055136)
chr1 (89-290)||(24202686-24202888)
chr1 (38-285)||(43988314-43988566)
chr1 (89-304)||(19358760-19358975)
chr1 (89-304)||(19361349-19361564)
chr1 (89-304)||(19379989-19380204)
chr1 (25-163)||(25439738-25439875)
chr1 (27-89)||(24202573-24202635)
chr1 (11-88)||(24787148-24787226)
chr1 (173-268)||(26644897-26644994)
chr1 (183-268)||(47703946-47704033)
chr1 (173-268)||(19072928-19073026)
chr1 (173-268)||(19120818-19120916)
chr1 (173-268)||(16124515-16124613)
chr1 (173-268)||(27104371-27104469)
chr1 (173-268)||(3281708-3281805)
chr1 (183-268)||(9476261-9476348)
chr1 (183-268)||(13598398-13598485)
chr1 (183-268)||(29651811-29651898)
chr1 (176-268)||(37069770-37069864)
chr1 (183-268)||(775672-775759)
chr1 (173-246)||(13604623-13604697)
chr1 (173-238)||(21536569-21536635)
chr1 (173-268)||(47098824-47098921)
chr1 (89-156)||(19366225-19366292)
chr1 (27-89)||(19366112-19366174)
chr1 (173-247)||(32889461-32889536)
chr1 (27-89)||(19361237-19361298)
chr1 (27-89)||(47098633-47098693)
chr1 (27-89)||(47102647-47102707)
chr1 (28-89)||(3281936-3281995)
chr1 (27-89)||(19358648-19358709)
chr1 (173-265)||(47102841-47102935)
chr1 (205-264)||(9459419-9459479)
chr1 (205-264)||(9463246-9463306)
chr1 (205-264)||(16226386-16226446)
chr1 (28-87)||(37069998-37070055)
[»] scaffold0355 (2 HSPs)
scaffold0355 (54-290)||(9514-9748)
scaffold0355 (8-182)||(3671-3845)
[»] scaffold0464 (1 HSPs)
scaffold0464 (25-307)||(323-605)
[»] scaffold0197 (2 HSPs)
scaffold0197 (38-305)||(14161-14433)
scaffold0197 (38-278)||(19017-19260)
[»] scaffold0188 (4 HSPs)
scaffold0188 (89-290)||(17869-18071)
scaffold0188 (89-290)||(23962-24164)
scaffold0188 (27-89)||(17756-17818)
scaffold0188 (27-89)||(23849-23911)
[»] scaffold0259 (1 HSPs)
scaffold0259 (38-278)||(2103-2346)
[»] scaffold0028 (1 HSPs)
scaffold0028 (38-278)||(148808-149051)
[»] scaffold0009 (2 HSPs)
scaffold0009 (200-305)||(181980-182088)
scaffold0009 (38-132)||(176829-176925)
[»] scaffold0140 (2 HSPs)
scaffold0140 (173-268)||(8419-8516)
scaffold0140 (27-89)||(8225-8285)
[»] scaffold0036 (1 HSPs)
scaffold0036 (173-267)||(85684-85780)
[»] scaffold0087 (3 HSPs)
scaffold0087 (173-268)||(43961-44058)
scaffold0087 (173-268)||(36832-36929)
scaffold0087 (27-89)||(36640-36700)
[»] scaffold0006 (3 HSPs)
scaffold0006 (183-268)||(5683-5770)
scaffold0006 (183-268)||(2492-2579)
scaffold0006 (173-246)||(133280-133354)
[»] scaffold0148 (1 HSPs)
scaffold0148 (173-268)||(10729-10827)
[»] scaffold0978 (1 HSPs)
scaffold0978 (236-313)||(300-376)
[»] scaffold0098 (1 HSPs)
scaffold0098 (186-246)||(45276-45337)
[»] scaffold0176 (1 HSPs)
scaffold0176 (173-246)||(17286-17361)
[»] scaffold0154 (1 HSPs)
scaffold0154 (205-238)||(11500-11533)
[»] scaffold0267 (1 HSPs)
scaffold0267 (205-264)||(269-329)


Alignment Details
Target: chr6 (Bit Score: 282; Significance: 1e-158; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 8 - 320
Target Start/End: Original strand, 22010520 - 22010833
Alignment:
Q  8 tagcaaaggagagaacca-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgt 106  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22010520 tagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgt 22010619  T
Q  107 gagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattg 206  Q
    ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22010620 gagagtggggaaatatcaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattg 22010719  T
Q  207 gattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttccttttatcgcttaccttgtt 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  22010720 gattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttccttttatcgcttatcttgtt 22010819  T
Q  307 ttgctttggtatct 320  Q
    ||||||||||||||    
T  22010820 ttgctttggtatct 22010833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 8 - 320
Target Start/End: Complemental strand, 11857236 - 11856920
Alignment:
Q  8 tagcaaaggagagaacca-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgt 106  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11857236 tagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgt 11857137  T
Q  107 gagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11857136 gagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattg 11857037  T
Q  207 gattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtg---ttttgttcttccttttatcgcttacctt 303  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||||   |||||||||||||||||||||||  |||    
T  11857036 gattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaatcttcttggtgtttttttgttcttccttttatcgcttgtctt 11856937  T
Q  304 gttttgctttggtatct 320  Q
    |||||||||||||||||    
T  11856936 gttttgctttggtatct 11856920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 11 - 320
Target Start/End: Original strand, 14737403 - 14737712
Alignment:
Q  11 caaaggagagaacca-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgtgag 109  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  14737403 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgag 14737502  T
Q  110 agtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggat 209  Q
    |||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14737503 agtgggaaaataccaaagggtagaatctagggtttgttcatatgtaaagcttgaaggctagag-tcttgtaaccttttgtaacactttctcatattggat 14737601  T
Q  210 tggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttccttttatcgcttaccttgttttg 309  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||| |||||| |||||||||    
T  14737602 tggagagctgctctctcccccagattaggccatattggctgaactggatcaacaatcttctcggtgttttgttctttcttttaccgcttatcttgttttg 14737701  T
Q  310 ctttggtatct 320  Q
    |||||||||||    
T  14737702 ctttggtatct 14737712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 11 - 320
Target Start/End: Original strand, 14742263 - 14742572
Alignment:
Q  11 caaaggagagaacca-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgtgag 109  Q
    |||||||| |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  ||||||    
T  14742263 caaaggagggaaccaatgggttaagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcactttgggttttagggttcatagtgtgag 14742362  T
Q  110 agtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggat 209  Q
    |||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  14742363 agtgggaaaataccaaagggtagaatctagggtttgttcatatgtaaagcttgaaggctagag-tcttgtaaccttttgtaacactttctcatattggat 14742461  T
Q  210 tggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttccttttatcgcttaccttgttttg 309  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||| |||||||||    
T  14742462 tggagagctgctctctcccccaaattaggtcatattggctgaactgggtcaacaatcttctcggtgttttgttctttcttttaccgcttatcttgttttg 14742561  T
Q  310 ctttggtatct 320  Q
    ||||| |||||    
T  14742562 ctttgatatct 14742572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 25 - 320
Target Start/End: Complemental strand, 28184751 - 28184452
Alignment:
Q  25 atgggttgagtgtctttgttgagagtgtctcttgggttggg---aaaaacattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaaca 121  Q
    |||||||||| ||||||||||||||||||||||||||| ||   |||||||| |||||||||||||||||||||||||||  |||||||||||| ||| |    
T  28184751 atgggttgagggtctttgttgagagtgtctcttgggtttgggaaaaaaacatagtaatcaccttgggttttagggttcatagtgtgagagtgggaaaata 28184652  T
Q  122 ccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgct 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||||||||    
T  28184651 ccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtg-ttgtaaccttttgtaacactttctcatattagattggagagctgct 28184553  T
Q  222 ctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttc-ttccttttatcgcttaccttgttt-tgctttggtatc 319  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||| ||||| |||||| ||||||| |||||||| |||    
T  28184552 ctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttctttctttttaccgcttatcttgtttatgctttggaatc 28184453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 25 - 285
Target Start/End: Original strand, 28155412 - 28155671
Alignment:
Q  25 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacacca 124  Q
    ||||| || ||| ||||| ||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||  |||||||||||| ||| ||||    
T  28155412 atggggtgtgtgcctttgatgagagtgtttcttaggttgggaaaaacattgtaatcaccttgggatttagggttcatagtgtgagagtgggaaaatacca 28155511  T
Q  125 aagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctc 224  Q
    ||||||||| |||||||||||||||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28155512 aagggtaga-tctagggtttgttcatgtgtaaagcttgaaagctaaa-ttcttgtaaccttttgtaacactttctcatattggattggagagctgctctc 28155609  T
Q  225 tcccccagattaggccatattggctgaactgggacaacaatctt-ctcggtgttttgttctt 285  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||  ||||||||||||||||    
T  28155610 tcccccagattaggccacattggctgaactgggtcaacaatcttgttcggtgttttgttctt 28155671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 25 - 307
Target Start/End: Complemental strand, 6438743 - 6438461
Alignment:
Q  25 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacacca 124  Q
    ||||| || ||| ||||| |||||| || |||| |||||||||||||||||||||||||||||| ||| ||||||||  |||||||||||| ||| ||||    
T  6438743 atggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaatacca 6438644  T
Q  125 aagggtagaatctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctct 223  Q
    ||||||||  ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||    
T  6438643 aagggtagt-tctagggtttgttcatgtgtaaagcttgacaagctagagt-cttgtaaccttttgtaacactt-cacatattggattggagagctgctct 6438547  T
Q  224 ctcccccagattaggccatattggctgaactgggacaacaatctt-ctcggtgttttgttc-ttccttttatcgcttaccttgttt 307  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||| || ||| |||||||    
T  6438546 ctcccccagattaggccatattggctgaactgggacaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgttt 6438461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 38 - 278
Target Start/End: Complemental strand, 16838977 - 16838734
Alignment:
Q  38 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacaccaaagggtagaat 135  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||||||||||||  ||||||  |||| ||| ||||||||||||| |    
T  16838977 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 16838879  T
Q  136 ctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 233  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  16838878 ctagggtttgttcatgtgtaaagcttgaatagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 16838780  T
Q  234 ttaggccatattggctgaactgggacaacaatctt-ctcggtgttt 278  Q
    ||| |||| ||||||||||||||| |||||||||| ||||||||||    
T  16838779 ttaagccacattggctgaactgggtcaacaatcttgctcggtgttt 16838734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 38 - 305
Target Start/End: Complemental strand, 6005650 - 6005379
Alignment:
Q  38 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacaccaaagggtagaat 135  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||  ||||||||  |||||| ||||| ||| ||||||||||||  |    
T  6005650 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgagggtgggaaaataccaaagggtagg-t 6005552  T
Q  136 ctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 233  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  6005551 ctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 6005453  T
Q  234 ttaggccatattggctgaactgggacaacaatctt-ctcggtgttttgttc--ttccttttatcgcttaccttgt 305  Q
    |||||||| ||||||||||||||| |||||||||| ||||||| |||||||  |||||||||||| ||| |||||    
T  6005452 ttaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttccttttatcgtttatcttgt 6005379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 38 - 268
Target Start/End: Original strand, 33330297 - 33330529
Alignment:
Q  38 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacaccaaagggtagaat 135  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||||||||||||  ||||||  |||| ||| ||||||||||||| |    
T  33330297 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 33330395  T
Q  136 ctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 233  Q
    |||||||||  ||||||||||||||||| | |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  33330396 ctagggttttgtcatgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 33330494  T
Q  234 ttaggccatattggctgaactgggacaacaatctt 268  Q
    |||||||| ||||||||||||||| ||||||||||    
T  33330495 ttaggccacattggctgaactgggtcaacaatctt 33330529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 38 - 268
Target Start/End: Original strand, 33335794 - 33336026
Alignment:
Q  38 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacaccaaagggtagaat 135  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||||||||||||  ||||||  |||| ||| ||||||||||||| |    
T  33335794 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 33335892  T
Q  136 ctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 233  Q
    |||||||||  ||||||||||||||||| | |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  33335893 ctagggttttgtcatgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 33335991  T
Q  234 ttaggccatattggctgaactgggacaacaatctt 268  Q
    ||||| || ||||||||||||||| ||||||||||    
T  33335992 ttaggtcacattggctgaactgggtcaacaatctt 33336026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 89 - 267
Target Start/End: Original strand, 5674685 - 5674865
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgtt-catgtgtaaagcttgaaggctagagtt-cttgtaaccttt 186  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||  ||||| | ||||||| ||||| | ||||  ||| ||||||||| ||    
T  5674685 ttttagggttcatattgtgagagtggggaaacaccaaagggtagaatctaggtcttgtttcttgtgtaa-gcttgcaagctattgtttcttgtaaccctt 5674783  T
Q  187 tgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatct 267  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  5674784 tgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatct 5674865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 5674554 - 5674633
Alignment:
Q  11 caaaggagagaaccat-gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    |||||||| ||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  5674554 caaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 5674633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 5757478 - 5757575
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||| ||||||||||    
T  5757478 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 5757575  T

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Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 268
Target Start/End: Complemental strand, 21356133 - 21356036
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||||  || ||||||||||| ||||| ||||||||||||||||||||||| |||||||||| |||||||| | |||||||| ||||||||||    
T  21356133 ttcttgtaactcttagtaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattggaccgaactgggtcaacaatctt 21356036  T

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Target: chr6; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 246
Target Start/End: Complemental strand, 22709188 - 22709041
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttg 188  Q
    ||||||||||||| |||||||||||||||||||| || |||||||| |||||  |||||| ||||||| ||||| | ||||   ||||||||||          
T  22709188 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgtaa-gcttgcaagctatttttcttgtaac------ 22709096  T
Q  189 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg 246  Q
        |||||| ||||| |||||||||||||||||||||||||||||||||  |||||||    
T  22709095 ----actttcatcatagtggattggagagctgctctctcccccagattagatcatattg 22709041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 5572240 - 5572338
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| |||||||||||||| |||||||| |||||||| | ||| |||| ||||||||||    
T  5572240 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccctagattaggtcatattggaccgaattgggtcaacaatctt 5572338  T

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Target: chr6; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 184 - 268
Target Start/End: Original strand, 10077176 - 10077262
Alignment:
Q  184 ttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| |||||||| | ||| |||| ||||||||||    
T  10077176 ttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaattgggtcaacaatctt 10077262  T

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Target: chr6; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 31086472 - 31086570
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| | |||||||||||||| ||||| |||||||||||| |||||||||||| |||||||  |||||||| |||||||||| ||||||||||    
T  31086472 ttcttgtaactcctttgtaacactttcatcatagtggattggagagttgctctctcccctagattagatcatattggactgaactgggtcaacaatctt 31086570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 4630040 - 4629954
Alignment:
Q  184 ttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||||||||| || || ||||||||||||||||||||| ||| |||||||| |||||||| |||||||| | ||||||||||    
T  4630040 ttttgtaacactttcatcttagtggattggagagctgctctcttccctagattaggtcatattggactgaactgagtcaacaatctt 4629954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 256
Target Start/End: Original strand, 21801343 - 21801429
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgg 256  Q
    |||||||||| |||||||||||||||  || || |||||||||||||||||| ||||||||||||||| |||||||| |||||||||    
T  21801343 ttcttgtaactcttttgtaacacttttatcttagtggattggagagctgctcgctcccccagattaggtcatattggactgaactgg 21801429  T

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Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 268
Target Start/End: Complemental strand, 31979611 - 31979513
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| |||||| ||||||||| || || |||||||||| ||||||||||||||||||||| | |||||||| | |||||||| ||||||||||    
T  31979611 ttcttgtaactcttttgcaacactttcatcttagtggattggagggctgctctctcccccagattatgtcatattggaccgaactgggtcaacaatctt 31979513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 18232943 - 18232867
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 247  Q
    |||||||||| |||||||||||||||| ||||| || ||||||| | ||||||||||||||||||||| ||||||||    
T  18232943 ttcttgtaactcttttgtaacactttcatcatagtgaattggagggttgctctctcccccagattaggtcatattgg 18232867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 268
Target Start/End: Complemental strand, 22963797 - 22963700
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg-gctgaactgggacaacaatctt 268  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| |||||||||| ||||||||| || |||||||  | |||||||| ||||||||||    
T  22963797 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctct-ccccagatttggtcatattgcaccgaactgggtcaacaatctt 22963700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 23824596 - 23824693
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg-gctgaactgggacaacaatctt 268  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| |||||||||| ||||||||| || |||||||  | |||||||| ||||||||||    
T  23824596 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctct-ccccagatttggtcatattgcaccgaactgggtcaacaatctt 23824693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 223 - 278
Target Start/End: Complemental strand, 5343527 - 5343471
Alignment:
Q  223 tctcccccagattaggccatattggctgaactgggacaacaatctt-ctcggtgttt 278  Q
    ||||||| ||||||||||| ||||||||||||||| |||||||||| ||||||||||    
T  5343527 tctcccctagattaggccacattggctgaactgggtcaacaatcttgctcggtgttt 5343471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 186 - 268
Target Start/End: Original strand, 5017482 - 5017566
Alignment:
Q  186 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccata-ttggctgaactgggacaacaatctt 268  Q
    ||||||||||||| ||||| | |||||||| | |||||||||||| |||||||| |||| ||| | |||||||| ||||||||||    
T  5017482 ttgtaacactttcatcatagtagattggagggttgctctctcccctagattaggtcatatttgaccgaactgggtcaacaatctt 5017566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 268
Target Start/End: Complemental strand, 31936651 - 31936587
Alignment:
Q  205 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||||||||||||||| |||||| |||| |||||||| | ||||| || ||||||||||    
T  31936651 tggattggagagctgctctctctcccagactaggtcatattggaccgaactaggtcaacaatctt 31936587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 5017304 - 5017364
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  5017304 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 5017364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 22709299 - 22709241
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 87  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||    
T  22709299 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgg 22709241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 264
Target Start/End: Complemental strand, 12195575 - 12195515
Alignment:
Q  205 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaa 264  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||| ||||||    
T  12195575 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 12195515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 270; Significance: 1e-151; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 8 - 320
Target Start/End: Original strand, 22173018 - 22173331
Alignment:
Q  8 tagcaaaggagagaacca-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgt 106  Q
    |||||||| || |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||      
T  22173018 tagcaaagtagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattag 22173117  T
Q  107 gagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22173118 gagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattg 22173217  T
Q  207 gattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttccttttatcgcttaccttgtt 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||| ||    
T  22173218 gattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttccttttaccgcttatcttatt 22173317  T
Q  307 ttgctttggtatct 320  Q
    ||||||||||||||    
T  22173318 ttgctttggtatct 22173331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 89 - 290
Target Start/End: Original strand, 28503780 - 28503982
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaacctttt 187  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||| |||||||||||||    
T  28503780 ttttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttattcttgtgtaaagcttgaaggctagagtttcttgtaacctttt 28503879  T
Q  188 gtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttcc 287  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  28503880 gtaacactttctcatattggattggagagctgctctcttccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcc 28503979  T
Q  288 ttt 290  Q
    |||    
T  28503980 ttt 28503982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 25 - 268
Target Start/End: Complemental strand, 18656677 - 18656436
Alignment:
Q  25 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacacca 124  Q
    ||||| || ||| ||||| ||||||||| |||| |||||||||||||||||||||||||||||| || |||||| ||  |||||||||||| ||| ||||    
T  18656677 atggggtgtgtgcctttgatgagagtgtttcttaggttgggaaaaacattgtaatcaccttgggattaagggtttatagtgtgagagtgggaaaatacca 18656578  T
Q  125 aagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctc 224  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18656577 aagggtaga-tctagggtttgttcatgtgtaaagcttgaatgctagagt-cttgtaaccttttgtaacactttctcatattggattggagagctgctctc 18656480  T
Q  225 tcccccagattaggccatattggctgaactgggacaacaatctt 268  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  18656479 tcccccagattaggccatattggctgaactgggtcaacaatctt 18656436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 89 - 290
Target Start/End: Complemental strand, 7167425 - 7167223
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaacctttt 187  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||||||||  ||| ||||||||| |||    
T  7167425 ttttagggttcatattgtgagagtggggaaataccaaagggtagaatctagggtttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 7167327  T
Q  188 gtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttc 286  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  7167326 gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttcttc 7167227  T
Q  287 cttt 290  Q
    ||||    
T  7167226 cttt 7167223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 92 - 320
Target Start/End: Original strand, 8738982 - 8739210
Alignment:
Q  92 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaaccttttgta 190  Q
    |||||||||| ||||||||||||||||| ||  | ||||||||||||||| |||||| ||||||| ||||||||||||  ||| ||||||||| ||||||    
T  8738982 tagggttcatattgtgagagtggggaaatacatatgggtagaatctagggattgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctttgta 8739080  T
Q  191 acactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttcctt 289  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |    
T  8739081 acactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttcttcc-t 8739179  T
Q  290 ttatcgcttaccttgttttgctttggtatct 320  Q
    || | ||||| ||||||||||||||||||||    
T  8739180 ttcttgcttatcttgttttgctttggtatct 8739210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 92 - 320
Target Start/End: Original strand, 9091220 - 9091448
Alignment:
Q  92 tagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaaccttttgta 190  Q
    |||||||||| ||||||||||||||||| ||  | ||||||||||||||| |||||| ||||||| ||||||||||||  ||| ||||||||| ||||||    
T  9091220 tagggttcatattgtgagagtggggaaatacatatgggtagaatctagggattgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctttgta 9091318  T
Q  191 acactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttcctt 289  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |    
T  9091319 acactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttcttcc-t 9091417  T
Q  290 ttatcgcttaccttgttttgctttggtatct 320  Q
    || | ||||| ||||||||||||||||||||    
T  9091418 ttcttgcttatcttgttttgctttggtatct 9091448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 89 - 320
Target Start/End: Original strand, 40372712 - 40372942
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttg 188  Q
    ||||||||||||| || |||||||||||||||||  | ||||||||||||||| |||||| ||||||| ||||| | ||||   ||||||||||| ||||    
T  40372712 ttttagggttcatattatgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttg 40372810  T
Q  189 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttcc 287  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  40372811 taacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttcttcc 40372910  T
Q  288 ttttatcgcttaccttgttttgctttggtatct 320  Q
     | | | ||||| |||||||||||||| |||||    
T  40372911 -tatcttgcttatcttgttttgctttgttatct 40372942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 89 - 320
Target Start/End: Original strand, 2671502 - 2671733
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaacctttt 187  Q
    ||||||||||||| ||||||||||||||||||||  | ||||||||||||||| ||| || ||||||| ||||| |  |||  ||| ||||||||| |||    
T  2671502 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttggtcttgtgtaa-gcttgcaatctattgtttcttgtaacccttt 2671600  T
Q  188 gtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttc 286  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  2671601 gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttcttc 2671700  T
Q  287 cttttatcgcttaccttgttttgctttggtatct 320  Q
    | ||| | ||||| |||||||||||||| |||||    
T  2671701 c-tttcttgcttatcttgttttgctttgttatct 2671733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 38 - 268
Target Start/End: Original strand, 2676939 - 2677171
Alignment:
Q  38 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacaccaaagggtagaat 135  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||||||||||||  ||||||  |||| ||| ||||||||||||| |    
T  2676939 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaaataccaaagggtaga-t 2677037  T
Q  136 ctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 233  Q
    |||||||||  ||||||||||||||||| | |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  2677038 ctagggttttgtcatgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 2677136  T
Q  234 ttaggccatattggctgaactgggacaacaatctt 268  Q
    |||||||| ||||||||||||||| ||||||||||    
T  2677137 ttaggccacattggctgaactgggtcaacaatctt 2677171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 38 - 268
Target Start/End: Original strand, 2672783 - 2673015
Alignment:
Q  38 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacaccaaagggtagaat 135  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| |||| |||||||  ||||||  |||| ||| ||||||||||||| |    
T  2672783 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggatttaaggttcatagtgtgaggatgggaaaataccaaagggtaga-t 2672881  T
Q  136 ctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 233  Q
    |||||||||  ||||||||||||||||| | |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  2672882 ctagggttttgtcatgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 2672980  T
Q  234 ttaggccatattggctgaactgggacaacaatctt 268  Q
    |||||||| ||||||||||||||| ||||||||||    
T  2672981 ttaggccacattggctgaactgggtcaacaatctt 2673015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 118; E-Value: 4e-60
Query Start/End: Original strand, 89 - 225
Target Start/End: Original strand, 28501613 - 28501750
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagag-ttcttgtaacctttt 187  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  28501613 ttttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttattcttgtgtaaagcttgaaggctagagtttcttgtaacctttt 28501712  T
Q  188 gtaacactttctcatattggattggagagctgctctct 225  Q
    ||||||||||||||||||||||||||||||||||||||    
T  28501713 gtaacactttctcatattggattggagagctgctctct 28501750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 38 - 283
Target Start/End: Complemental strand, 8512450 - 8512202
Alignment:
Q  38 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacaccaaagggtagaat 135  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||  ||||||||  ||||||  |||| ||  ||||||||||||  |    
T  8512450 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggttgggaaattaccaaagggtagg-t 8512352  T
Q  136 ctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 233  Q
    |||||||||  || |||||||||||||| | |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  8512351 ctagggttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 8512253  T
Q  234 ttaggccatattggctgaactgggacaacaatctt-ctcggtgttttgttc 283  Q
    |||||||| ||||||||||||||| |||||||||| |||||||||||||||    
T  8512252 ttaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttc 8512202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 38 - 283
Target Start/End: Complemental strand, 8517330 - 8517082
Alignment:
Q  38 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacaccaaagggtagaat 135  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||  ||||||||  ||||||  |||| ||  ||||||||||||  |    
T  8517330 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggttgggaaattaccaaagggtagg-t 8517232  T
Q  136 ctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 233  Q
    |||||||||  || |||||||||||||| | |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  8517231 ctagggttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 8517133  T
Q  234 ttaggccatattggctgaactgggacaacaatctt-ctcggtgttttgttc 283  Q
    |||||||| ||||||||||||||| |||||||||| |||||||||||||||    
T  8517132 ttaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttc 8517082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 89 - 290
Target Start/End: Complemental strand, 8477545 - 8477340
Alignment:
Q  89 ttttagggttcatgttgtgagagtgggg-aaacaccaaagggtagaatctagggtttgttcat-gtgtaaagcttgaaggctagagtt-cttgtaacctt 185  Q
    ||||||||||||| |||||||||||||| ||||||||||||||||||||||||  ||||| || |||||| ||||| | ||||  ||| ||||||||| |    
T  8477545 ttttagggttcatattgtgagagtgggggaaacaccaaagggtagaatctaggtcttgtttattgtgtaa-gcttgcaagctattgtttcttgtaaccct 8477447  T
Q  186 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgt-tttgttc 283  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||    
T  8477446 ttgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgtgtttgttc 8477347  T
Q  284 ttccttt 290  Q
    || ||||    
T  8477346 tttcttt 8477340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 38 - 278
Target Start/End: Complemental strand, 24968340 - 24968097
Alignment:
Q  38 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacaccaaagggtagaat 135  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||||||||||||  ||||||  |||| ||  ||||||||||||| |    
T  24968340 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggatttagggttcatagtgtgaggatgggaaagtaccaaagggtaga-t 24968242  T
Q  136 ctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 233  Q
    || ||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||| |||||||||| | |    
T  24968241 ctcgggtttgttcatgtgtaaagcttgaatagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctactctctccccaaaa 24968143  T
Q  234 ttaggccatattggctgaactgggacaacaatctt-ctcggtgttt 278  Q
    ||| |||| ||||||||||||||| |||||||||| ||||||||||    
T  24968142 ttaagccacattggctgaactgggtcaacaatcttgctcggtgttt 24968097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 89 - 268
Target Start/End: Original strand, 26928507 - 26928687
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaacctttt 187  Q
    ||||||||||||| |||||||||||||||||||| || ||||||||||||||  |||||| ||||||| ||||| | ||||   || ||||||||| |||    
T  26928507 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa-gcttgcaagctattttttcttgtaacccttt 26928605  T
Q  188 gtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatctt 268  Q
    ||||||||||| ||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  26928606 gtaacactttcatcatagtggattggagagttgctctctcccccagattaggtcatattggctgaactgggtcaacaatctt 26928687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 89 - 290
Target Start/End: Complemental strand, 32143501 - 32143299
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttg 188  Q
    ||||||||||||| ||| |||||||||||||||| || ||||||||||||||  |||||| ||||||| ||||| | ||||   ||||||||||| ||||    
T  32143501 ttttagggttcatattgagagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttg 32143403  T
Q  189 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatcttctcggtgt-tttgttctt 285  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | ||||| || |||||||||| | ||||| |||||||||    
T  32143402 taacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactaggtcaacaatctt-ttggtgtgtttgttctt 32143304  T
Q  286 ccttt 290  Q
    |||||    
T  32143303 ccttt 32143299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 89 - 290
Target Start/End: Complemental strand, 1306128 - 1305927
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttg 188  Q
    ||||||||||||| ||| |||||||||||||||| || |||||||| ||| |  |||||| ||||||| ||||| |  |||   ||||||||||| ||||    
T  1306128 ttttagggttcatattgagagagtggggaaacacaaatgggtagaaactatgacttgttcttgtgtaa-gcttgcaaactatttttcttgtaaccctttg 1306030  T
Q  189 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgt-tttgttcttc 286  Q
    |||||||||| || || ||||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||| | ||||| ||||||||||    
T  1306029 taacactttcatcgtagtggattggagagctgctatctcccctagattaggccatattggctgaactgggtcaacaatctt-ttggtgtgtttgttcttc 1305931  T
Q  287 cttt 290  Q
    ||||    
T  1305930 cttt 1305927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 38 - 305
Target Start/End: Complemental strand, 32475717 - 32475446
Alignment:
Q  38 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaac--accaaagggtaga 133  Q
    ||||| ||||||||  |||| |||||||||||  |||||||||||| |||||| ||  ||||||||  |||||| || ||||||   | ||||||||||     
T  32475717 ctttgatgagagtgaatcttaggttgggaaaacaacattgtaatcatcttgggattatgggttcatagtgtgag-gttgggaaatttatcaaagggtagg 32475619  T
Q  134 atctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccag 232  Q
     ||||||||||  || |||||||||||||| | |||||| ||||||||||  ||||||| || ||| |||||||||||||||||||||||||||||||||    
T  32475618 -tctagggttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactctttgtaa-acattcacatattggattggagagctgctctctcccccag 32475522  T
Q  233 attaggccatattggctgaactgggacaacaatctt-ctcggtgttttgttc--ttccttttatcgcttaccttgt 305  Q
    ||||||||| ||||||||||||||| |||||||||| || ||||||||||||  || ||||||||| ||| |||||    
T  32475521 attaggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttttcttttatcgtttatcttgt 32475446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 38 - 305
Target Start/End: Complemental strand, 32480575 - 32480304
Alignment:
Q  38 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaac--accaaagggtaga 133  Q
    ||||| ||||||||  |||| |||||||||||  |||||||||||| |||||| ||  ||||||||  |||||| || ||||||   | ||||||||||     
T  32480575 ctttgatgagagtgaatcttaggttgggaaaacaacattgtaatcatcttgggattatgggttcatagtgtgag-gttgggaaatttatcaaagggtagg 32480477  T
Q  134 atctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccag 232  Q
     ||||||||||  || |||||||||||||| | |||||| ||||||||||  ||||||| || ||| |||||||||||||||||||||||||||||||||    
T  32480476 -tctagggttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactctttgtaa-acattcacatattggattggagagctgctctctcccccag 32480380  T
Q  233 attaggccatattggctgaactgggacaacaatctt-ctcggtgttttgttc--ttccttttatcgcttaccttgt 305  Q
    ||||||||| ||||||||||||||| ||||||||||  | ||||||||||||  || ||||||||| ||| |||||    
T  32480379 attaggccacattggctgaactgggtcaacaatcttggttggtgttttgttcgttttcttttatcgtttatcttgt 32480304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 89 - 268
Target Start/End: Complemental strand, 27453138 - 27452958
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttg 188  Q
    ||||||||||||| ||| |||||||||||||||| || ||||||||  ||||  |||||| ||||||| ||||| | ||||   ||||||||||| ||||    
T  27453138 ttttagggttcatattgagagagtggggaaacacaaatgggtagaaaataggaattgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttg 27453040  T
Q  189 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| ||||| |||||||||||||||||||||||||| ||||||| |||||||| | |||||||  ||||||||||    
T  27453039 taacactttcatcatagtggattggagagctgctctctcccccggattaggtcatattggaccgaactggatcaacaatctt 27452958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 10 - 89
Target Start/End: Original strand, 8738846 - 8738926
Alignment:
Q  10 gcaaaggagagaacca-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||| |||||| |||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  8738846 gcaaaggagggaaccaatgggttgagtgtctttgtagagagtatctcttgggttgggaaaaacattgtaatcaccttgggt 8738926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 114 - 268
Target Start/End: Original strand, 27974884 - 27975039
Alignment:
Q  114 gggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttc-tcatattggattgg 212  Q
    ||||||||| || ||||||||  ||||  |||||| ||||||| ||||| | ||||   ||||||||||  |||||||||||||| ||||| ||||||||    
T  27974884 gggaaacacaaatgggtagaaattaggtcttgttcttgtgtaa-gcttgcaagctatttttcttgtaactctttgtaacactttcatcatagtggattgg 27974982  T
Q  213 agagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||||||||||||||||||| |||||||| | |||||||| ||||||||||    
T  27974983 agagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 27975039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 2671370 - 2671449
Alignment:
Q  11 caaaggagagaaccat-gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    |||||||| ||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2671370 caaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 2671449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 40372580 - 40372659
Alignment:
Q  11 caaaggagagaaccat-gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    |||||||| ||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  40372580 caaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 40372659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 8477660 - 8477598
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  8477660 gggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 8477598  T

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Target: chr3; HSP #27
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 31 - 89
Target Start/End: Original strand, 28501502 - 28501560
Alignment:
Q  31 tgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28501502 tgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 28501560  T

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Target: chr3; HSP #28
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 28503665 - 28503727
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  28503665 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgggt 28503727  T

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Target: chr3; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 8370476 - 8370573
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||| ||||||||||    
T  8370476 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 8370573  T

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Target: chr3; HSP #30
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 7167558 - 7167478
Alignment:
Q  11 caaaggagagaaccat-gggttgagtgtctttgttgagagtgtctcttgggttggga-aaaacattgtaatcaccttgggt 89  Q
    |||||||| ||||||  |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7167558 caaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaaacattgtaatcaccttgggt 7167478  T

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Target: chr3; HSP #31
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 9091085 - 9091164
Alignment:
Q  11 caaaggagagaaccat-gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    |||||||| ||||||  ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  9091085 caaaggagggaaccaaagggttgagtgtctttgtagagagtatctcttgggttgggaaaaacattgtaatcaccttgggt 9091164  T

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Target: chr3; HSP #32
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 18552872 - 18552970
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| |||||||| | |||||||| ||||||||||    
T  18552872 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 18552970  T

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Target: chr3; HSP #33
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 91 - 247
Target Start/End: Original strand, 6794623 - 6794778
Alignment:
Q  91 ttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgta 190  Q
    ||||||||||| |||||||||||||  | ||| || ||||||||  ||||  |||||| ||||||| ||||| | ||||   ||||||||||  ||||||    
T  6794623 ttagggttcatattgtgagagtgggtga-cacaaatgggtagaaattaggacttgttcttgtgtaa-gcttgcaagctaattttcttgtaactctttgta 6794720  T
Q  191 acactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 247  Q
    |||||||| ||||| ||||||||||||||||||||||||||| |||||| ||||||||    
T  6794721 acactttcatcatagtggattggagagctgctctctcccccatattaggtcatattgg 6794778  T

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Target: chr3; HSP #34
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 173 - 268
Target Start/End: Complemental strand, 16264447 - 16264350
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | ||||| || ||||||||||    
T  16264447 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactaggtcaacaatctt 16264350  T

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Target: chr3; HSP #35
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 173 - 268
Target Start/End: Complemental strand, 21711320 - 21711223
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||||  |||||||||||||| ||||| |||||| ||||||||||||||||||||||||||| |||||||| | |||||||| ||||||||||    
T  21711320 ttcttgtaactctttgtaacactttcatcatagtggatttgagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 21711223  T

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Target: chr3; HSP #36
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 36029191 - 36029094
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatct 267  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||| |||||||| | |||||||| |||||||||    
T  36029191 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctttctcccccagattaggtcatattggacagaactgggtcaacaatct 36029094  T

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Target: chr3; HSP #37
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 186 - 268
Target Start/End: Original strand, 27986449 - 27986533
Alignment:
Q  186 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||| ||||||||||    
T  27986449 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 27986533  T

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Target: chr3; HSP #38
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 173 - 265
Target Start/End: Original strand, 1736294 - 1736389
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaat 265  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| |||||||| | |||||||| |||||||    
T  1736294 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaat 1736389  T

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Target: chr3; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 30709779 - 30709877
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| ||||||||||| |||| ||||| |||||||||| ||||||||||||||||||||||| |||||||| | |||||||| ||||||||||    
T  30709779 ttcttgtaactcttttgtaacaatttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 30709877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 186 - 268
Target Start/End: Original strand, 33386669 - 33386753
Alignment:
Q  186 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||  ||||||||||    
T  33386669 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactggatcaacaatctt 33386753  T

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Target: chr3; HSP #41
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 48438312 - 48438236
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 247  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| ||||||||    
T  48438312 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattgg 48438236  T

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Target: chr3; HSP #42
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 3715991 - 3716089
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| |||||||||||||||| ||||| | |||||||||||||||||||| || |||||||| |||||||| | |||||||| ||||||||||    
T  3715991 ttcttgtaactcttttgtaacactttcatcatagtagattggagagctgctctctctcctagattaggtcatattggaccgaactgggtcaacaatctt 3716089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 40592771 - 40592869
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| |||||||||||||||| ||||| | |||||||||||| ||||||||| ||||||||| |||||||| | |||||||| ||||||||||    
T  40592771 ttcttgtaactcttttgtaacactttcatcatagtcgattggagagcttctctctcccacagattaggtcatattggaccgaactgggtcaacaatctt 40592869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 268
Target Start/End: Complemental strand, 25795879 - 25795781
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| |||| ||||||||||| || || | |||||||||||||||||||||||||||||||| |||||||| | ||||| || ||||||||||    
T  25795879 ttcttgtaactctttcgtaacactttcatcttagtagattggagagctgctctctcccccagattaggtcatattggaccgaactaggtcaacaatctt 25795781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 268
Target Start/End: Complemental strand, 26299086 - 26298988
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg-gctgaactgggacaacaatctt 268  Q
    |||||||||| |||||||||||||||| ||||| | |||||||| ||||||||||||||||||||| | |||||||  | |||||||| ||||||||||    
T  26299086 ttcttgtaactcttttgtaacactttcatcatagtagattggagggctgctctctcccccagattatgtcatattgaaccgaactgggtcaacaatctt 26298988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 1306239 - 1306179
Alignment:
Q  29 gttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||| | |||  ||||||||||||||||||||||||||| ||||||||||    
T  1306239 gttgagtgtctttgtagtgaggatctcttgggttgggaaaaacattgtaaacaccttgggt 1306179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 186 - 268
Target Start/End: Original strand, 1417493 - 1417577
Alignment:
Q  186 ttgtaacactttct-catattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||||||| | || |||||||||| | ||||||||||||||||||||| |||||||| | |||||||| ||||||||||    
T  1417493 ttgtaacactttcttcttagtggattggagggatgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 1417577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 220 - 268
Target Start/End: Complemental strand, 10207983 - 10207935
Alignment:
Q  220 ctctctcccccagattaggccatattggctgaactgggacaacaatctt 268  Q
    |||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  10207983 ctctctcccccagattaggccacattggctgaactgggtcaacaatctt 10207935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 47923895 - 47923993
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggct-gaactgggacaacaatctt 268  Q
    |||||||||| |||||||| ||||||| ||||| | ||||| || |||||||||||||| |||||||| |||||||| | |||||||| ||||||||||    
T  47923895 ttcttgtaactcttttgtagcactttcatcatagtagattgaagggctgctctctcccctagattaggtcatattggatcgaactgggtcaacaatctt 47923993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 268
Target Start/End: Complemental strand, 37466388 - 37466291
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||||   ||||||||||||| || || |||||||||| ||| ||||||||||||||||||| |||||||| | |||||| | ||||||||||    
T  37466388 ttcttgtaactcattgtaacactttcatcttagtggattggagggctactctctcccccagattaggtcatattggaccgaactgtgtcaacaatctt 37466291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 186 - 268
Target Start/End: Original strand, 39039995 - 39040079
Alignment:
Q  186 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||||||| ||||| |||||||||||| || ||||| |||||||||||| |||||||| | ||||| || ||||||||||    
T  39039995 ttgtaacactttcatcatagtggattggagagttgttctcttccccagattaggtcatattggaccgaactaggtcaacaatctt 39040079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 40844749 - 40844674
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 247  Q
    |||||||||| |||||||||||||||| ||||| |||||| ||| |||||||||| |||||||||||| ||||||||    
T  40844749 ttcttgtaactcttttgtaacactttcatcatagtggatttgagggctgctctct-ccccagattaggtcatattgg 40844674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 3328346 - 3328443
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||||   ||||||||||||| || || ||||||| || |||||||||||| | |||||||| ||||||||  ||||||||| ||||||||||    
T  3328346 ttcttgtaactcattgtaacactttcatcttagtggattgaagggctgctctctcctctagattaggtcatattggaatgaactgggtcaacaatctt 3328443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 202 - 243
Target Start/End: Original strand, 4386947 - 4386988
Alignment:
Q  202 tattggattggagagctgctctctcccccagattaggccata 243  Q
    |||||||||||||||||||||||||||||||| |||| ||||    
T  4386947 tattggattggagagctgctctctcccccagagtaggtcata 4386988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 86
Target Start/End: Original strand, 4386774 - 4386831
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttg 86  Q
    ||||||||||||||||| | |||  ||||||||||||||  |||||||||||||||||||    
T  4386774 gggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaatcaccttg 4386831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 3323680 - 3323755
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 247  Q
    ||||||||||   ||||||||||||| || || |||||||||| |||| |||||| ||||||||||| ||||||||    
T  3323680 ttcttgtaactcattgtaacactttcatcttagtggattggagggctgttctctctcccagattaggtcatattgg 3323755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 23392166 - 23392106
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  23392166 gggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttgggt 23392106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 24694963 - 24695023
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  24694963 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 24695023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 26928396 - 26928456
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  26928396 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 26928456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 27986253 - 27986313
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  27986253 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 27986313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 36029382 - 36029322
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  36029382 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 36029322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 40592579 - 40592639
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  40592579 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 40592639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 23410604 - 23410529
Alignment:
Q  10 gcaaaggagagaaccat-gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttg 86  Q
    ||||||||||||||  | ||||||||||||||||| | |||  |||||||||||||  |||||||||||| |||||||    
T  23410604 gcaaaggagagaactttagggttgagtgtctttgtagtgaggttctcttgggttgg--aaaacattgtaaacaccttg 23410529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 24695153 - 24695251
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| |||||||||||||||| |||||  ||||| ||| | |||||||||||  |||||||| |||||||| | ||||| || ||||||||||    
T  24695153 ttcttgtaactcttttgtaacactttcatcatagcggattagagggttgctctctcccgtagattaggtcatattggaccgaactaggtcaacaatctt 24695251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 238
Target Start/End: Complemental strand, 53894119 - 53894082
Alignment:
Q  201 atattggattggagagctgctctctcccccagattagg 238  Q
    |||||||||||||| |||||||||||||||||| ||||    
T  53894119 atattggattggagggctgctctctcccccagactagg 53894082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 86
Target Start/End: Complemental strand, 21711511 - 21711454
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttg 86  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| |||||||    
T  21711511 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttg 21711454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 33386455 - 33386532
Alignment:
Q  11 caaaggagagaaccat-gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    |||||||||||||  | ||||||||||||||||| | |||  |||||||||||  || ||||||||||| ||||||||||    
T  33386455 caaaggagagaactttagggttgagtgtctttgtagtgaggatctcttgggtt--gagaaacattgtaaacaccttgggt 33386532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 264
Target Start/End: Original strand, 38210569 - 38210629
Alignment:
Q  205 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaa 264  Q
    ||||||||||||||||||||||||||| | |||| || ||||| | |||||||| ||||||    
T  38210569 tggattggagagctgctctctcccccatactaggtcagattggaccgaactgggtcaacaa 38210629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 89
Target Start/End: Original strand, 47923704 - 47923761
Alignment:
Q  30 ttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    |||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  47923704 ttgagtgtctttgtagtgagaatctcttgggttggg--aaacattgtaaacaccttgggt 47923761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 264
Target Start/End: Original strand, 50494198 - 50494258
Alignment:
Q  205 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaa 264  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||| ||||||    
T  50494198 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 50494258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 269; Significance: 1e-150; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 8 - 307
Target Start/End: Original strand, 7289749 - 7290049
Alignment:
Q  8 tagcaaaggagagaacca-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgt 106  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7289749 tagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgt 7289848  T
Q  107 gagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattg 206  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7289849 gagagtggggaaacaccaaagggtagaatatagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattg 7289948  T
Q  207 gattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttccttttatcgcttaccttgtt 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||    
T  7289949 gattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttccttttatcacttatcttgtt 7290048  T
Q  307 t 307  Q
    |    
T  7290049 t 7290049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 25 - 285
Target Start/End: Original strand, 25328120 - 25328379
Alignment:
Q  25 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacacca 124  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25328120 atgggttgtgtgtctttgatgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacacca 25328219  T
Q  125 aagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctc 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25328220 aagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagag-tcttgtaaccttttgtaacactttctcatattggattggagagctgctctc 25328318  T
Q  225 tcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttctt 285  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25328319 tcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttctt 25328379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 89 - 290
Target Start/End: Complemental strand, 6311477 - 6311276
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaacctttt 187  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||    
T  6311477 ttttagggttcatcttgtgagagtggggaaacaccaaagggtagaatctagggtttgt-cttgtgtaaagcttgaaggctagagtttcttgtaacctttt 6311379  T
Q  188 gtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttcc 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  6311378 gtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttcc 6311279  T
Q  288 ttt 290  Q
    |||    
T  6311278 ttt 6311276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 25 - 320
Target Start/End: Original strand, 39784665 - 39784961
Alignment:
Q  25 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacacca 124  Q
    ||||| || ||| ||||| |||||| ||||||| |||||||||||||||||||||||||||||| ||| ||||||||  |||||||||||| ||| ||||    
T  39784665 atggggtgtgtgcctttgatgagagagtctcttaggttgggaaaaacattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaatacca 39784764  T
Q  125 aagggtagaatctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctct 223  Q
    ||||||||  ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||    
T  39784765 aagggtagt-tctagggtttgttcatgtgtaaagcttgataagctagagt-cttgtaaccttttgtaacactt-cacatattggattggagagctgctct 39784861  T
Q  224 ctcccccagattaggccatattggctgaactgggacaacaatctt-ctcggtgttttgttc-ttccttttatcgcttaccttgttt-tgctttggtatct 320  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||| |||||| ||||||| |||||||| ||||    
T  39784862 ctcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgcttatcttgtttgtgctttggaatct 39784961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 89 - 320
Target Start/End: Complemental strand, 36979558 - 36979327
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaacctttt 187  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||  ||| ||||||||| |||    
T  36979558 ttttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 36979460  T
Q  188 gtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttc 286  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  36979459 gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttcttc 36979360  T
Q  287 cttttatcgcttaccttgttttgctttggtatct 320  Q
    | ||| | ||||| ||||||||||||||||||||    
T  36979359 c-tttcttgcttatcttgttttgctttggtatct 36979327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 156; E-Value: 8e-83
Query Start/End: Original strand, 90 - 320
Target Start/End: Original strand, 33037724 - 33037953
Alignment:
Q  90 tttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaaccttttg 188  Q
    |||||||||||| ||||||||||||||||||||  | |||||||||||||||||||||| ||||||| ||||||||||||  ||| ||||||||| ||||    
T  33037724 tttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggtttgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctttg 33037822  T
Q  189 taacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttcct 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||    
T  33037823 taacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttctt-ct 33037921  T
Q  289 tttatcgcttaccttgttttgctttggtatct 320  Q
    ||| | ||||| ||||||||||||||||||||    
T  33037922 tttcttgcttatcttgttttgctttggtatct 33037953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 89 - 320
Target Start/End: Original strand, 18853083 - 18853315
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaacc-ttt 186  Q
    ||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||| ||||||| ||||||| ||||  ||| ||||||||| |||    
T  18853083 ttttagggttcatattgtgagagtggggaaataccaaagggtaaaatctagggtttgttcttgtgtaa-gcttgaatgctattgtttcttgtaacccttt 18853181  T
Q  187 tgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttctt 285  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  18853182 tgtaacactttcattatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttctt 18853281  T
Q  286 ccttttatcgcttaccttgttttgctttggtatct 320  Q
    || ||| | ||||| ||||||||||||||||||||    
T  18853282 cc-tttcttgcttatcttgttttgctttggtatct 18853315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 89 - 320
Target Start/End: Original strand, 18870477 - 18870709
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaacc-ttt 186  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||| ||||  ||| ||||||||| |||    
T  18870477 ttttagggttcatattgtgagagtggggaaataccaaagggtagaatctagggtttgttcttgtgtaa-gcttgaatgctattgtttcttgtaacccttt 18870575  T
Q  187 tgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttctt 285  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||    
T  18870576 tgtaacactttcattatattggattggagagctgctctctcccccagattaggccatattggatgaactgggtcaacaatcttcttggtgttttgttctt 18870675  T
Q  286 ccttttatcgcttaccttgttttgctttggtatct 320  Q
    || ||| | ||||| ||||||||||||||||||||    
T  18870676 cc-tttcttgcttatcttgttttgctttggtatct 18870709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 89 - 279
Target Start/End: Complemental strand, 30655827 - 30655636
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaacctttt 187  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||  ||| ||||||||| |||    
T  30655827 ttttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 30655729  T
Q  188 gtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgtttt 279  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  30655728 gtaacactttcatcatattagattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgtttt 30655636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 135; E-Value: 3e-70
Query Start/End: Original strand, 89 - 320
Target Start/End: Original strand, 10689058 - 10689290
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaa-gggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaaccttt 186  Q
    ||||||||||||| ||||||||||||||||||| || | ||||||||||||||| |||||| ||||||| ||||||||||||  ||| ||||||||| |     
T  10689058 ttttagggttcatattgtgagagtggggaaacaacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaaccctc 10689156  T
Q  187 tgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttctt 285  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  10689157 tgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttctt 10689256  T
Q  286 ccttttatcgcttaccttgttttgctttggtatct 320  Q
    || ||| |  |||| ||||||||||||||||||||    
T  10689257 cc-tttcttacttatcttgttttgctttggtatct 10689290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 38 - 305
Target Start/End: Complemental strand, 35745624 - 35745353
Alignment:
Q  38 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacaccaaagggtagaat 135  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||  ||||||||  |||||| ||||| ||| ||||||||||||  |    
T  35745624 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgagggtgggaaaataccaaagggtagg-t 35745526  T
Q  136 ctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 233  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  35745525 ctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 35745427  T
Q  234 ttaggccatattggctgaactgggacaacaatctt-ctcggtgttttgttc--ttccttttatcgcttaccttgt 305  Q
    |||||||| ||||||||||||||| |||||||||| ||||||| |||||||  |||||||||||| ||| |||||    
T  35745426 ttaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttccttttatcgtttatcttgt 35745353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 89 - 290
Target Start/End: Original strand, 4759991 - 4760193
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaacctttt 187  Q
    ||||||||||||| ||||||||||||||||||||  | ||||||||||||||| |||||| ||||||| ||||||||||||  ||| ||||||||| |||    
T  4759991 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 4760089  T
Q  188 gtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttc 286  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| | |||||||||||||    
T  4760090 gtaacactttcatcatattggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaatcttcttgatgttttgttcttc 4760189  T
Q  287 cttt 290  Q
    ||||    
T  4760190 cttt 4760193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 38 - 305
Target Start/End: Original strand, 10684116 - 10684388
Alignment:
Q  38 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacaccaaagggtagaat 135  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||  ||||||||  ||||||  |||| ||  ||||||||||||  |    
T  10684116 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggttgggaaattaccaaagggtagg-t 10684214  T
Q  136 ctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 233  Q
    |||||||||  || |||||||||||||| | |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  10684215 ctagggttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 10684313  T
Q  234 ttaggccatattggctgaactgggacaacaatctt-ctcggtgttttgttc--ttccttttatcgcttaccttgt 305  Q
    |||||||| ||||||||||||||| |||||||||| || ||||||||||||  || ||||||||| ||| |||||    
T  10684314 ttaggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttttcttttatcgtttatcttgt 10684388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 89 - 290
Target Start/End: Original strand, 1261871 - 1262073
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttg 188  Q
    ||||||||||||| |||||||||||||||||||| || ||||||||||||||  |||| | ||||||| ||||| | ||||   ||||||||||| ||||    
T  1261871 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaatctaggtcttgtacttgtgtaa-gcttgcaagctatttttcttgtaaccctttg 1261969  T
Q  189 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgt-tttgttcttc 286  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||| | ||||| ||||||||||    
T  1261970 taacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggttgaactgggtcaacaatctttttggtgtgtttgttcttc 1262069  T
Q  287 cttt 290  Q
    ||||    
T  1262070 cttt 1262073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 89 - 290
Target Start/End: Original strand, 31071146 - 31071349
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttg 188  Q
    ||||||||||||| |||||||||||||||||||| || |||||||| |||||  |||||| ||||||| ||||| | ||||   ||||||||||| ||||    
T  31071146 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttg 31071244  T
Q  189 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatcttctcggtgt-tttgttctt 285  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | ||||| || |||||||||| | ||||| |||||||||    
T  31071245 taacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactcggtcaacaatctttttggtgtgtttgttctt 31071344  T
Q  286 ccttt 290  Q
    |||||    
T  31071345 ccttt 31071349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 186 - 290
Target Start/End: Complemental strand, 26287985 - 26287879
Alignment:
Q  186 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgt-tttgttc 283  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| |||||||    
T  26287985 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctttttggtgtgtttgttc 26287886  T
Q  284 ttccttt 290  Q
    |||||||    
T  26287885 ttccttt 26287879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 186 - 290
Target Start/End: Complemental strand, 26301242 - 26301136
Alignment:
Q  186 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgt-tttgttc 283  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| |||||||    
T  26301242 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctttttggtgtgtttgttc 26301143  T
Q  284 ttccttt 290  Q
    |||||||    
T  26301142 ttccttt 26301136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 186 - 290
Target Start/End: Complemental strand, 26313236 - 26313130
Alignment:
Q  186 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgt-tttgttc 283  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| |||||||    
T  26313236 ttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctttttggtgtgtttgttc 26313137  T
Q  284 ttccttt 290  Q
    |||||||    
T  26313136 ttccttt 26313130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 25 - 101
Target Start/End: Original strand, 25327994 - 25328070
Alignment:
Q  25 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcat 101  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25327994 atgggttgtgtgtctttgatgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcat 25328070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 6311614 - 6311532
Alignment:
Q  8 tagcaaaggagagaaccat-gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6311614 tagcaaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 6311532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 18870345 - 18870424
Alignment:
Q  11 caaaggagagaaccat-gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    |||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18870345 caaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 18870424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 30655959 - 30655880
Alignment:
Q  11 caaaggagagaaccat-gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    |||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30655959 caaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 30655880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 10688924 - 10689003
Alignment:
Q  11 caaaggagagaaccat-gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    |||||||| ||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  10688924 caaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 10689003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 18852951 - 18853030
Alignment:
Q  11 caaaggagagaaccat-gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    |||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18852951 caaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaatattgtaatcaccttgggt 18853030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 4456125 - 4456050
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 247  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  4456125 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggccatattgg 4456050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 183 - 268
Target Start/End: Original strand, 26403240 - 26403327
Alignment:
Q  183 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||| ||||||||||    
T  26403240 cttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 26403327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 33037592 - 33037671
Alignment:
Q  11 caaaggagagaaccat-gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    |||||||| ||||||  |||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||    
T  33037592 caaaggagggaaccaaagggttgagtgtcttcgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 33037671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 1261758 - 1261820
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  1261758 gggttgagtgtctttgtagagagggtctcttgggttgggaaaaacattgtaatcaccttgggt 1261820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 114 - 268
Target Start/End: Original strand, 19175696 - 19175851
Alignment:
Q  114 gggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttc-tcatattggattgg 212  Q
    ||||||||| || | ||||||  ||||  |||||| ||||||| ||||| ||||||   ||||||||||  |||||||||||||| ||||| ||||||||    
T  19175696 gggaaacacaaatgtgtagaagttaggtcttgttcttgtgtaa-gcttgcaggctatttttcttgtaactctttgtaacactttcatcatagtggattgg 19175794  T
Q  213 agagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||| ||||||||||||||||||||| |||||||| | ||||| || ||||||||||    
T  19175795 agagttgctctctcccccagattaggtcatattggaccgaactaggtcaacaatctt 19175851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 265
Target Start/End: Complemental strand, 7412438 - 7412344
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaat 265  Q
    ||||||||||  |||||||||||||| ||||| ||||||||||||||||||||||||||| |||||| |||||||| | |||||||| |||||||    
T  7412438 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattggaccgaactgggtcaacaat 7412344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 4759875 - 4759938
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttggg-aaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||||||||||||    
T  4759875 gggttgagtgtctttgtagagagagtctcttgggttgggaaaaaacattgtaatcaccttgggt 4759938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 23799576 - 23799674
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| |||||||||||| ||| |||||| |||||||| | |||||||| ||||||||||    
T  23799576 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcctccaaattaggtcatattggaccgaactgggtcaacaatctt 23799674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 36979672 - 36979611
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||    
T  36979672 gggttgagtgtctttgtagagagtgtctcttaggttggg-aaaacattgtaatcaccttgggt 36979611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 268
Target Start/End: Original strand, 4696609 - 4696693
Alignment:
Q  186 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggct-gaactgggacaacaatctt 268  Q
    ||||||| ||||| ||||| |||||||||| ||||||||||||||||||||||| |||||||| | |||||||| ||||||||||    
T  4696609 ttgtaactctttcatcatagtggattggagggctgctctctcccccagattaggtcatattggatcgaactgggtcaacaatctt 4696693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 6127319 - 6127243
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 247  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||||||||||||| ||||| |||||| ||||||||    
T  6127319 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctcttccccaaattaggtcatattgg 6127243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 5702482 - 5702580
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| |||||||||||||||| |||||  ||||||||| | |||||||||||||| |||||| |||||||| | |||||||| ||||||||||    
T  5702482 ttcttgtaactcttttgtaacactttcatcataggggattggagggatgctctctcccccatattaggtcatattggaccgaactgggtcaacaatctt 5702580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 266
Target Start/End: Original strand, 9765852 - 9765914
Alignment:
Q  205 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatc 266  Q
    |||||||||||||||||||||||||||||||||| |||||||| | |||||||| ||||||||    
T  9765852 tggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatc 9765914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 29 - 89
Target Start/End: Original strand, 31071035 - 31071095
Alignment:
Q  29 gttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||| | |||  ||||||||||||||||||||||||||| ||||||||||    
T  31071035 gttgagtgtctttgtagtgaggatctcttgggttgggaaaaacattgtaaacaccttgggt 31071095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 26288183 - 26288121
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||| ||||||||| |||||  ||||||| ||||||||||||||||||| ||||||||||    
T  26288183 gggttgaatgtctttgtagagagaatctcttgagttgggaaaaacattgtaaacaccttgggt 26288121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 26301440 - 26301378
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||| ||||||||| |||||  ||||||| ||||||||||||||||||| ||||||||||    
T  26301440 gggttgaatgtctttgtagagagaatctcttgagttgggaaaaacattgtaaacaccttgggt 26301378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 26313434 - 26313372
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||| ||||||||| |||||  ||||||| ||||||||||||||||||| ||||||||||    
T  26313434 gggttgaatgtctttgtagagagaatctcttgagttgggaaaaacattgtaaacaccttgggt 26313372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 19752394 - 19752491
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||||   ||||||||||||| || || ||||||||||||||||||||||||| ||| |||| |||||||| | ||||| || ||||||||||    
T  19752394 ttcttgtaactcattgtaacactttcatcttagtggattggagagctgctctctcccctagactaggtcatattggaccgaactaggtcaacaatctt 19752491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 7412629 - 7412569
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| |||||  ||||||||||||||  ||||||||||| ||||||||||    
T  7412629 gggttgagtgtctttgtagagaggatctcttgggttggg--aaacattgtaaacaccttgggt 7412569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 4696416 - 4696476
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  4696416 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 4696476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 238
Target Start/End: Original strand, 18810982 - 18811015
Alignment:
Q  205 tggattggagagctgctctctcccccagattagg 238  Q
    |||||||||| |||||||||||||||||||||||    
T  18810982 tggattggagggctgctctctcccccagattagg 18811015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 26288070 - 26287999
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttg 162  Q
    ||||||||||||| |||||||||||||| ||||| || |||||||| |||||  |||||| ||||| |||||||    
T  26288070 ttttagggttcatattgtgagagtgggg-aacacaaatgggtagaaactaggacttgttcttgtgt-aagcttg 26287999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 26301327 - 26301256
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttg 162  Q
    ||||||||||||| |||||||||||||| ||||| || |||||||| |||||  |||||| ||||| |||||||    
T  26301327 ttttagggttcatattgtgagagtgggg-aacacaaatgggtagaaactaggacttgttcttgtgt-aagcttg 26301256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 89 - 162
Target Start/End: Complemental strand, 26313321 - 26313250
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttg 162  Q
    ||||||||||||| |||||||||||||| ||||| || |||||||| |||||  |||||| ||||| |||||||    
T  26313321 ttttagggttcatattgtgagagtgggg-aacacaaatgggtagaaactaggacttgttcttgtgt-aagcttg 26313250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 9054836 - 9054912
Alignment:
Q  173 ttcttgtaacct-tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 247  Q
    |||||||||||  |||||| ||||||| || || |||||| |||||||||||||||| ||||| |||| ||||||||    
T  9054836 ttcttgtaaccactttgtatcactttcatcttagtggattagagagctgctctctcctccagagtaggtcatattgg 9054912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 86
Target Start/End: Original strand, 23799384 - 23799441
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttg 86  Q
    ||||||||||||||||| |||||  ||||||||||||||   |||||||||| |||||||    
T  23799384 gggttgagtgtctttgtagagaggatctcttgggttggg--gaacattgtaaacaccttg 23799441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 264
Target Start/End: Original strand, 43079877 - 43079937
Alignment:
Q  205 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaa 264  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||| ||||||    
T  43079877 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 43079937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 264
Target Start/End: Original strand, 43082248 - 43082308
Alignment:
Q  205 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaa 264  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||| ||||||    
T  43082248 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 43082308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 267; Significance: 1e-149; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 8 - 320
Target Start/End: Complemental strand, 43592541 - 43592227
Alignment:
Q  8 tagcaaaggagagaacca-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgt 106  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||      
T  43592541 tagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattaa 43592442  T
Q  107 gagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43592441 gagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattg 43592342  T
Q  207 gattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttccttttatcgcttaccttgtt 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||    
T  43592341 gattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttccttttatcacttatcttgtt 43592242  T
Q  307 t-tgctttggtatct 320  Q
    | ||||||| |||||    
T  43592241 tatgctttgttatct 43592227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 8 - 320
Target Start/End: Complemental strand, 27450076 - 27449762
Alignment:
Q  8 tagcaaaggagagaacca-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgt 106  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||      
T  27450076 tagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattaa 27449977  T
Q  107 gagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27449976 gagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattg 27449877  T
Q  207 gattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttccttttatcgcttaccttgtt 306  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||    
T  27449876 gattggagagctgctctctcccccagattaggctatattggctgaactgggtcaacaatcttctcggtgttttgttcttccttttatcacttatcttgtt 27449777  T
Q  307 t-tgctttggtatct 320  Q
    | ||||||| |||||    
T  27449776 tatgctttgttatct 27449762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 8 - 320
Target Start/End: Complemental strand, 43598986 - 43598672
Alignment:
Q  8 tagcaaaggagagaacca-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgt 106  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||      
T  43598986 tagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattaa 43598887  T
Q  107 gagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43598886 gagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattg 43598787  T
Q  207 gattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttccttttatcgcttaccttgtt 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||| ||||||    
T  43598786 gattggagagctgctctctcccccagattaggccatattggctgaactggaccaacaatcttctcggtgttttgttcttccttttatcacttatcttgtt 43598687  T
Q  307 t-tgctttggtatct 320  Q
    | ||||||| |||||    
T  43598686 tatgctttgttatct 43598672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 8 - 320
Target Start/End: Complemental strand, 43604478 - 43604164
Alignment:
Q  8 tagcaaaggagagaacca-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgt 106  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||      
T  43604478 tagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattaa 43604379  T
Q  107 gagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43604378 gagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattg 43604279  T
Q  207 gattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttccttttatcgcttaccttgtt 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||| ||||||    
T  43604278 gattggagagctgctctctcccccagattaggccatattggctgaactggaccaacaatcttctcggtgttttgttcttccttttatcacttatcttgtt 43604179  T
Q  307 t-tgctttggtatct 320  Q
    | ||||||| |||||    
T  43604178 tatgctttgttatct 43604164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 263; E-Value: 1e-146
Query Start/End: Original strand, 8 - 320
Target Start/End: Complemental strand, 43609970 - 43609656
Alignment:
Q  8 tagcaaaggagagaacca-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgt 106  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||      
T  43609970 tagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattaa 43609871  T
Q  107 gagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43609870 gagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattg 43609771  T
Q  207 gattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttccttttatcgcttaccttgtt 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||| ||||||    
T  43609770 gattggagagctgctctctcccccagattaggccatattggctgaactggaccaacaatcttctcggtgttttgttcttccttttatcacttatcttgtt 43609671  T
Q  307 t-tgctttggtatct 320  Q
    | ||||||| |||||    
T  43609670 tatgctttgttatct 43609656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 8 - 290
Target Start/End: Original strand, 1456985 - 1457268
Alignment:
Q  8 tagcaaaggagagaacca-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgt 106  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1456985 tagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgt 1457084  T
Q  107 gagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1457085 gagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattg 1457184  T
Q  207 gattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttccttt 290  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  1457185 gattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttctcggtgttttgttcttccttt 1457268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 8 - 320
Target Start/End: Complemental strand, 27445232 - 27444918
Alignment:
Q  8 tagcaaaggagagaacca-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgt 106  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||      
T  27445232 tagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattaa 27445133  T
Q  107 gagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattg 206  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27445132 gagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattg 27445033  T
Q  207 gattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttccttttatcgcttaccttgtt 306  Q
    ||||||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||    
T  27445032 gattggagagctgctctctcccccagattaggctatattgcctgaactgggtcaacaatcttctcggtgttttgttcttccttttatcacttatcttgtt 27444933  T
Q  307 t-tgctttggtatct 320  Q
    | ||||||| |||||    
T  27444932 tatgctttgttatct 27444918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 232; E-Value: 1e-128
Query Start/End: Original strand, 8 - 320
Target Start/End: Complemental strand, 15044948 - 15044634
Alignment:
Q  8 tagcaaaggagagaacca-tgggttgagtgtctttgttgagagtgtctcttgggtt-gggaaaaacattgtaatcaccttgggttttagggttcatgttg 105  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||  ||    
T  15044948 tagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggtttgggaaaaacattgtaatcaccttgggttttagggttcatagtg 15044849  T
Q  106 tgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatatt 205  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||    
T  15044848 tgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt-cttgtaaccttttgtaacactttctcatatt 15044750  T
Q  206 ggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttccttttatcgcttaccttgt 305  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||| | ||||| |||||    
T  15044749 ggattggagagctgctctctcccccatattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttcttccttttcttgcttatcttgt 15044650  T
Q  306 tt-tgctttggtatct 320  Q
    || |||||||| ||||    
T  15044649 ttatgctttggaatct 15044634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 38 - 307
Target Start/End: Original strand, 28807429 - 28807697
Alignment:
Q  38 ctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatct 137  Q
    ||||| ||||||||| |||| |||||||||||||||||||||||||||||| ||| ||||||||  |||||||||||| ||| ||||||||||||| |||    
T  28807429 ctttgatgagagtgtttcttaggttgggaaaaacattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaataccaaagggtaga-tct 28807527  T
Q  138 agggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagattag 237  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||    
T  28807528 agggtttgttcatgtgtaaagcttgaaagctaga-ttcttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccagattag 28807625  T
Q  238 gccatattggctgaactgggacaacaatctt-ctcggtgttttgttc-ttccttttatcgcttaccttgttt 307  Q
    |||| ||||||||||||||| |||||||||| ||||||||||||||| ||||||||| || ||| |||||||    
T  28807626 gccacattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgttt 28807697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 90 - 290
Target Start/End: Complemental strand, 30631586 - 30631385
Alignment:
Q  90 tttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaaccttttg 188  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  30631586 tttagggttcatattgtgagagtggggaaacaccaaagggtagaatctatggtttgttcatgtgtaaagcttgaaggctagagtttcttgtaaccctttg 30631487  T
Q  189 taacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttcct 288  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||||| |||||||||||||||||    
T  30631486 taacactttctcatattggattggagagctgctctctcccccagattaggccacattggctgaactgagtcaacaatcttcttggtgttttgttcttcct 30631387  T
Q  289 tt 290  Q
    ||    
T  30631386 tt 30631385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 89 - 290
Target Start/End: Complemental strand, 31180394 - 31180193
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaacctttt 187  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||||||| |||    
T  31180394 ttttatggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgt-cttgtgtaaagcttgaaggctagagtttcttgtaacccttt 31180296  T
Q  188 gtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttcc 287  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |    
T  31180295 gtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttctttc 31180196  T
Q  288 ttt 290  Q
    |||    
T  31180195 ttt 31180193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 38 - 285
Target Start/End: Original strand, 37556478 - 37556724
Alignment:
Q  38 ctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatct 137  Q
    ||||| || |||||| |||| ||||||||||| |||||||||||||||||| ||| ||||||||  |||||||||||| ||| ||||||||||||  |||    
T  37556478 ctttgatgtgagtgtttcttaggttgggaaaa-cattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaataccaaagggtagt-tct 37556575  T
Q  138 agggtttgttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagatta 236  Q
    |||||||||||||||||||||||||| | |||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  37556576 agggtttgttcatgtgtaaagcttgataagctaga-tacttgtaaccttttgtaacactttcacatattggattggagagctgctctctcccccagatta 37556674  T
Q  237 ggccatattggctgaactgggacaacaatctt-ctcggtgttttgttctt 285  Q
    ||||| ||||||||||||||| |||||||||| |||||||||||||||||    
T  37556675 ggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctt 37556724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 38 - 285
Target Start/End: Original strand, 37561300 - 37561546
Alignment:
Q  38 ctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatct 137  Q
    ||||| || |||||| |||| ||||||||||| |||||||||||||||||| ||| ||||||||  |||||||||||| ||| ||||||||||||  |||    
T  37561300 ctttgatgtgagtgtttcttaggttgggaaaa-cattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaataccaaagggtagt-tct 37561397  T
Q  138 agggtttgttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagatta 236  Q
    |||||||||||||||||||||||||| | |||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  37561398 agggtttgttcatgtgtaaagcttgataagctaga-tacttgtaaccttttgtaacactttcacatattggattggagagctgctctctcccccagatta 37561496  T
Q  237 ggccatattggctgaactgggacaacaatctt-ctcggtgttttgttctt 285  Q
    ||||| ||||||||||||||| |||||||||| |||||||||||||||||    
T  37561497 ggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctt 37561546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 38 - 305
Target Start/End: Complemental strand, 2785608 - 2785337
Alignment:
Q  38 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacaccaaagggtagaat 135  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||  ||||||||  |||||| ||||| ||| ||||||||||||  |    
T  2785608 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgagggtgggaaaataccaaagggtagg-t 2785510  T
Q  136 ctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 233  Q
    |||||||||||||||| ||||||||||||  |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  2785509 ctagggtttgttcatgagtaaagcttgaaaagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 2785411  T
Q  234 ttaggccatattggctgaactgggacaacaatctt-ctcggtgttttgttc--ttccttttatcgcttaccttgt 305  Q
    |||||||| ||||||||||||||| |||||||||| ||||||| |||||||  |||||||||||| ||| |||||    
T  2785410 ttaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttccttttatcgtttatcttgt 2785337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 38 - 305
Target Start/End: Complemental strand, 33791549 - 33791278
Alignment:
Q  38 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacaccaaagggtagaat 135  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||  ||||||||  |||||| ||||| ||| ||||||||||||  |    
T  33791549 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgagggtgggaaaataccaaagggtagg-t 33791451  T
Q  136 ctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 233  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||| |||||||||    
T  33791450 ctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctttcccccaga 33791352  T
Q  234 ttaggccatattggctgaactgggacaacaatctt-ctcggtgttttgttc--ttccttttatcgcttaccttgt 305  Q
    |||||||| ||||||||||||||| |||||||||| ||||||| |||||||  |||||||||||| ||| |||||    
T  33791351 ttaggccacattggctgaactgggtcaacaatcttgctcggtg-tttgttcttttccttttatcgtttatcttgt 33791278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 89 - 307
Target Start/End: Complemental strand, 24136028 - 24135809
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttg 188  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||  |||||| ||||||| ||||| | ||||   ||||||||||| ||||    
T  24136028 ttttagggttcacattgtgagagtggggaaacaccaaagggtagaatctaggacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttg 24135930  T
Q  189 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgt-tttgttcttc 286  Q
    |||||||||| || || || |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||    
T  24135929 taacactttcatcttagtgcattggatagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgtgtttgttcttc 24135830  T
Q  287 cttttatcgcttaccttgttt 307  Q
    ||||| | ||||| |||||||    
T  24135829 cttttctagcttatcttgttt 24135809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 89 - 290
Target Start/End: Complemental strand, 38192353 - 38192151
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttg 188  Q
    ||||||||||||| |||||||||||||||||||| || |||||||| |||||  |||||| ||||||| ||||| | ||||   ||||||||||| ||||    
T  38192353 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttg 38192255  T
Q  189 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgt-tttgttcttc 286  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||||||||||    
T  38192254 taacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctttttggtgtgtttgttcttc 38192155  T
Q  287 cttt 290  Q
    ||||    
T  38192154 cttt 38192151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 89 - 290
Target Start/End: Complemental strand, 38219578 - 38219376
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttg 188  Q
    ||||||||||||| |||||||||||||||||||| || |||||||| |||||  |||||| ||||||| ||||| | ||||   ||||||||||| ||||    
T  38219578 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttg 38219480  T
Q  189 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgt-tttgttcttc 286  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||||||||||    
T  38219479 taacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctttttggtgtgtttgttcttc 38219380  T
Q  287 cttt 290  Q
    ||||    
T  38219379 cttt 38219376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 38 - 278
Target Start/End: Original strand, 31396843 - 31397088
Alignment:
Q  38 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacaccaaagggtagaat 135  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||  ||||||||  ||||||  |||| |||  |||||||||||| |    
T  31396843 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggatgggaaaatgccaaagggtaga-t 31396941  T
Q  136 ctagggtttgtt--catgtgtaaagcttga-aggctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctccccca 231  Q
    ||||||||| ||  | |||||||||||||| | |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  31396942 ctagggttttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctccccca 31397040  T
Q  232 gattaggccatattggctgaactgggacaacaatctt-ctcggtgttt 278  Q
    |||||||||| ||||||||||||||| |||||||||| ||||||||||    
T  31397041 gattaggccacattggctgaactgggtcaacaatcttgctcggtgttt 31397088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 89 - 290
Target Start/End: Complemental strand, 35387842 - 35387640
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttg 188  Q
    ||||||||||||| |||||||||||||||||||| || |||||||| |||||  || ||| ||||||| ||||| | ||||   ||||||||||| ||||    
T  35387842 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttattcttgtgtaa-gcttgcaagctatttttcttgtaaccctttg 35387744  T
Q  189 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgt-tttgttcttc 286  Q
    |||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| | ||||| ||||||||||    
T  35387743 taacactttcatcatagtagattggagagctgctctctcccccagattaggccatattggctgaattgggtcaacaatctttttggtgtgtttgttcttc 35387644  T
Q  287 cttt 290  Q
    ||||    
T  35387643 cttt 35387640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 38 - 278
Target Start/End: Original strand, 31401700 - 31401945
Alignment:
Q  38 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacaccaaagggtagaat 135  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||  ||||||||  ||||||  |||| |||  |||||||||||| |    
T  31401700 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggatgggaaaatgccaaagggtaga-t 31401798  T
Q  136 ctagggtttgtt--catgtgtaaagcttga-aggctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctccccca 231  Q
    |||| |||| ||  | |||||||||||||| | |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  31401799 ctagagttttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctccccca 31401897  T
Q  232 gattaggccatattggctgaactgggacaacaatctt-ctcggtgttt 278  Q
     ||||||||| ||||||||||||||| |||||||||| ||||||||||    
T  31401898 tattaggccacattggctgaactgggtcaacaatcttgctcggtgttt 31401945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 135 - 278
Target Start/End: Complemental strand, 33768314 - 33768169
Alignment:
Q  135 tctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccag 232  Q
    ||||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||| |||||||    
T  33768314 tctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctcccccccag 33768216  T
Q  233 attaggccatattggctgaactgggacaacaatctt-ctcggtgttt 278  Q
    ||||||||| ||||||||||||||| |||||||||| ||||||||||    
T  33768215 attaggccacattggctgaactgggtcaacaatcttgctcggtgttt 33768169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 30631719 - 30631640
Alignment:
Q  11 caaaggagagaacca-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  30631719 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 30631640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 31180526 - 31180447
Alignment:
Q  11 caaaggagagaaccat-gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    |||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31180526 caaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 31180447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 89 - 268
Target Start/End: Complemental strand, 15464712 - 15464532
Alignment:
Q  89 ttttagggttcatg-ttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaacctttt 187  Q
    |||||||||||||  ||||||||||||| |||||| || ||||||||  ||||  |||||| ||||||| ||||| | ||||   ||||||||||  |||    
T  15464712 ttttagggttcattattgtgagagtggg-aaacacaaatgggtagaaattaggtcttgttcttgtgtaa-gcttgcaagctatttttcttgtaactcttt 15464615  T
Q  188 gtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||  |||||||| | |||||||| ||||||||||    
T  15464614 gtaacactttcatcatagtggattggagagctgctctctcccccagattagatcatattggaccgaactgggtcaacaatctt 15464532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 9353332 - 9353429
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||| ||||||||||    
T  9353332 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 9353429  T

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Target: chr5; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 36932350 - 36932447
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||| ||||||||||    
T  36932350 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 36932447  T

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Target: chr5; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 24136159 - 24136080
Alignment:
Q  11 caaaggagagaaccat-gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    |||||||| ||||||  ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  24136159 caaaggagggaaccaaagggttgagtgtctttgtagaaagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 24136080  T

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Target: chr5; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 268
Target Start/End: Complemental strand, 10281849 - 10281751
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| |||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||| |||||||| | |||||||| ||||||||||    
T  10281849 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagatcaggtcatattggaccgaactgggtcaacaatctt 10281751  T

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Target: chr5; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 35387955 - 35387893
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||    
T  35387955 gggttgagtgtctttgtagagagggtctcttgggttggaaaaaacattgtaatcaccttgggt 35387893  T

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Target: chr5; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 267
Target Start/End: Original strand, 11916971 - 11917068
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatct 267  Q
    |||||||||| |||||||||||||||| | ||| ||||||||||||||||||||||||||| |||||| |||||||| | |||||||| |||||||||    
T  11916971 ttcttgtaactcttttgtaacactttcattatagtggattggagagctgctctctcccccatattaggtcatattggaccgaactgggtcaacaatct 11917068  T

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Target: chr5; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 268
Target Start/End: Complemental strand, 14520327 - 14520230
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||||  |||||||||||||| ||||| ||||||| |||||||||||| |||| |||||||| |||||||| | |||||||| ||||||||||    
T  14520327 ttcttgtaactctttgtaacactttcatcatagtggattgaagagctgctctcccccctagattaggtcatattggaccgaactgggtcaacaatctt 14520230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 3880397 - 3880321
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 247  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||||||||||||| || ||||||||| ||||||||    
T  3880397 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctgcctcagattaggtcatattgg 3880321  T

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Target: chr5; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 183 - 268
Target Start/End: Original strand, 17003970 - 17004057
Alignment:
Q  183 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||| || |||||| ||||| ||||||| |||||||||||||||||||||||||| |||||||| | |||||||| ||||||||||    
T  17003970 cttttgaaatactttcatcatagtggattgaagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 17004057  T

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Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 265
Target Start/End: Original strand, 12084175 - 12084269
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaat 265  Q
    ||||||||||  |||||||||||||| ||||| ||||||||||||||||||||| ||||| |||||| |||| ||| | |||||||| |||||||    
T  12084175 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctgccccatattaggtcatagtggaccgaactgggtcaacaat 12084269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 268
Target Start/End: Complemental strand, 19588844 - 19588746
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| |||||||||||||  |||||||  |||||||| | |||||||| ||||||||||    
T  19588844 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctccctaagattagttcatattggaccgaactgggtcaacaatctt 19588746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 38219691 - 38219629
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| | |||  ||||||||||||||||||||||||||| ||||||||||    
T  38219691 gggttgagtgtctttgtagtgaggatctcttgggttgggaaaaacattgtaaacaccttgggt 38219629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 173 - 268
Target Start/End: Complemental strand, 28832356 - 28832259
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||||   ||||||||||||| || || |||||||||| ||||||||||||||||||||||| |||||||| | |||| ||| ||||||||||    
T  28832356 ttcttgtaactcattgtaacactttcatcttagtggattggagggctgctctctcccccagattaggtcatattggaccgaaccgggtcaacaatctt 28832259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 42127410 - 42127507
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggct-gaactgggacaacaatctt 268  Q
    ||||||||||   ||||||||||||| || || |||||||| | ||||||||||||||||||||||| |||||| | | |||||||| ||||||||||    
T  42127410 ttcttgtaactcattgtaacactttcatcttagtggattggggggctgctctctcccccagattaggtcatattagatcgaactgggtcaacaatctt 42127507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 205 - 264
Target Start/End: Original strand, 4410241 - 4410301
Alignment:
Q  205 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaa 264  Q
    ||||||||||||||||||||||||||||| |||| || ||||| | |||||||| ||||||    
T  4410241 tggattggagagctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 4410301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 24553335 - 24553395
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  24553335 gggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttgggt 24553395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 11181641 - 11181700
Alignment:
Q  28 ggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    |||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  11181641 ggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttgggt 11181700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 7160712 - 7160770
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 87  Q
    ||||||||||||||||| | |||  |||||||| |||||  ||||||||||||||||||||    
T  7160712 gggttgagtgtctttgtagtgaggttctcttggattggg--aaacattgtaatcaccttgg 7160770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 14520519 - 14520461
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 87  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||    
T  14520519 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgg 14520461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 28832544 - 28832486
Alignment:
Q  29 gttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  28832544 gttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttgggt 28832486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 268
Target Start/End: Original strand, 31300612 - 31300693
Alignment:
Q  189 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| || || |||||||||||| | ||||||||| |||| |||| |||||||| | |||||||| ||||||||||    
T  31300612 taacactttcatcttagtggattggagagtttctctctccctcagactaggtcatattggaccgaactgggtcaacaatctt 31300693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 33768417 - 33768365
Alignment:
Q  38 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttggg 88  Q
    ||||| ||||||||| |||| |||||||||||  |||||||||||||||||||    
T  33768417 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttggg 33768365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 264
Target Start/End: Original strand, 15552464 - 15552524
Alignment:
Q  205 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaa 264  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||| ||||||    
T  15552464 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 15552524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 264
Target Start/End: Complemental strand, 31179431 - 31179371
Alignment:
Q  205 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaa 264  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||| ||||||    
T  31179431 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 31179371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 264
Target Start/End: Original strand, 31542953 - 31543013
Alignment:
Q  205 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaa 264  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||| ||||||    
T  31542953 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 31543013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 264
Target Start/End: Original strand, 31545299 - 31545359
Alignment:
Q  205 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaa 264  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||| ||||||    
T  31545299 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 31545359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 266; Significance: 1e-148; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 8 - 320
Target Start/End: Complemental strand, 12397173 - 12396860
Alignment:
Q  8 tagcaaaggagagaacca-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgt 106  Q
    ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12397173 tagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattgt 12397074  T
Q  107 gagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattg 206  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  12397073 gatagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagattaaaggctagagttcttgtaaccttttgtaacactttctcatattg 12396974  T
Q  207 gattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttccttttatcgcttaccttgtt 306  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||| ||||||    
T  12396973 gattggagagctgttctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttccctttaccgcttatcttgtt 12396874  T
Q  307 ttgctttggtatct 320  Q
    ||||||||||||||    
T  12396873 ttgctttggtatct 12396860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 25 - 320
Target Start/End: Complemental strand, 12406575 - 12406280
Alignment:
Q  25 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacacca 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  12406575 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttggcttttagggttcatattgtgagagtggggaaacacca 12406476  T
Q  125 aagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctc 224  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||    
T  12406475 aagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctattctc 12406376  T
Q  225 tcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttccttttatcgcttaccttgttttgctttggtatct 320  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||    
T  12406375 tcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttctttcttttaccgcttatcttgttttgctttggtatct 12406280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 8 - 320
Target Start/End: Original strand, 31109406 - 31109721
Alignment:
Q  8 tagcaaaggagagaaccat--gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttg 105  Q
    ||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  31109406 tagcaaaggagggaaccatatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtg 31109505  T
Q  106 tgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatatt 205  Q
    |||||||||| ||| | ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  31109506 tgagagtgggaaaatatcaaagggtagaatctagggtttgttcatgtgcaaagcttgaaggctagag-tcttgtaaccttttgtaacactttctcatatt 31109604  T
Q  206 ggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatctt-ctcggtgttttgttcttccttttatcgcttaccttg 304  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||  |||||||||||||||||||||| | | ||| ||||    
T  31109605 ggattggagagctgctctctcccctagattaggccatattggctgaactgggtcaacaatcttgttcggtgttttgttcttccttttcttgtttatcttg 31109704  T
Q  305 ttt-tgctttggtatct 320  Q
    ||| |||||||| ||||    
T  31109705 tttatgctttggaatct 31109721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 8 - 307
Target Start/End: Original strand, 24024150 - 24024451
Alignment:
Q  8 tagcaaaggagagaacca-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgt 106  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||  |||    
T  24024150 tagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggtttggaaaaacattgtaatcaccgtgggttttagggttcatcgtgt 24024249  T
Q  107 gagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattg 206  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  24024250 gagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagag-tcttgtaacattttgtaacactttctcatattg 24024348  T
Q  207 gattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatctt-ctcggtg-ttttgttcttccttttatcgcttaccttg 304  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||| |||||||||||||||| | ||||| ||||    
T  24024349 gattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttgttcggtgtttttgttcttccttttcttgcttatcttg 24024448  T
Q  305 ttt 307  Q
    |||    
T  24024449 ttt 24024451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 38 - 307
Target Start/End: Complemental strand, 19992544 - 19992273
Alignment:
Q  38 ctttgttgagagtgtctcttgggttggg-aaaaacattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatc 136  Q
    ||||| || |||||| |||| ||||||| ||||||||||||||||||||||| ||| ||||||||  |||||||||||| ||| ||||||||||||  ||    
T  19992544 ctttgatgtgagtgtttcttaggttggggaaaaacattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaataccaaagggtagt-tc 19992446  T
Q  137 tagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagatt 235  Q
    ||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  19992445 tagggtttgttcatgtgtaaagcttgataagctagagt-cttgtaaccttttgtaacactttcacatattggattggagagctgctctctcccccagatt 19992347  T
Q  236 aggccatattggctgaactgggacaacaatctt-ctcggtgttttgttc-ttccttttatcgcttaccttgttt 307  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||| || ||| |||||||    
T  19992346 aggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgttt 19992273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 89 - 320
Target Start/End: Original strand, 20357463 - 20357694
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaacctttt 187  Q
    ||||||||||||| ||||||||||||||||||||  | |||||||||||||||  ||||| ||||||||||||||||||||  ||| ||||||||| |||    
T  20357463 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcatgttcttgtgtaaagcttgaaggctattgtttcttgtaacccttt 20357562  T
Q  188 gtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttcc 287  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||    
T  20357563 gtaacactttctcatattggattggagagctgctctctcccccaaattaggccatattggctgaactgggtcaacaatcttcttggtattttgttcttcc 20357662  T
Q  288 ttttatcgcttaccttgttttgctttggtatct 320  Q
    |||| | ||||| |||| ||||||||| |||||    
T  20357663 ttttcttgcttatcttg-tttgctttgttatct 20357694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 89 - 308
Target Start/End: Complemental strand, 2058147 - 2057926
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaa-gggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaaccttt 186  Q
    ||||||||||||| ||||||||||||||||||| || | ||||||||||||||| |||||| ||||||| ||||||| ||||  ||| ||||||||| ||    
T  2058147 ttttagggttcatattgtgagagtggggaaacaacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaatgctattgtttcttgtaaccctt 2058049  T
Q  187 tgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttctt 285  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  2058048 tgtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttctt 2057949  T
Q  286 ccttttatcgcttaccttgtttt 308  Q
    |||||||| ||||| ||||||||    
T  2057948 ccttttattgcttatcttgtttt 2057926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 179 - 321
Target Start/End: Complemental strand, 4866820 - 4866678
Alignment:
Q  179 taaccttttgtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttt 278  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  4866820 taaccttttgtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttt 4866721  T
Q  279 tgttcttccttttatcgcttaccttgttttgctttggtatctt 321  Q
    |||||||||||||| |||||| |||||||||||||||||||||    
T  4866720 tgttcttccttttaccgcttatcttgttttgctttggtatctt 4866678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 38 - 285
Target Start/End: Original strand, 21812092 - 21812340
Alignment:
Q  38 ctttgttgagagtgtctcttgggttggg-aaaaacattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatc 136  Q
    ||||| ||||||||| |||| ||||||| ||||||||||||||||||||||| ||  ||||||||  |||||||||||| ||| ||||||||||||| ||    
T  21812092 ctttgatgagagtgtttcttaggttggggaaaaacattgtaatcaccttgggattatgggttcatagtgtgagagtgggaaaataccaaagggtaga-tc 21812190  T
Q  137 tagggtttgttcatgtgtaaagctt-ga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagat 234  Q
    ||||||||||||||||||||||||| || | |||||||| |||| |||||||||||| |||| | |||||||||||||| ||||||||||||||||||||    
T  21812191 tagggtttgttcatgtgtaaagctttgacaagctagagt-cttggaaccttttgtaagactt-cacatattggattggaaagctgctctctcccccagat 21812288  T
Q  235 taggccatattggctgaactgggacaacaatctt-ctcggtgttttgttctt 285  Q
    ||||||| ||||||||||||||| |||||||||| |||||||||||||||||    
T  21812289 taggccacattggctgaactgggtcaacaatcttgctcggtgttttgttctt 21812340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 89 - 290
Target Start/End: Complemental strand, 21639988 - 21639786
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttg 188  Q
    ||||||||||||| |||||||||||||||||||| || ||||||||||||||  |||||| ||||||| ||||| | ||||   ||||||||||| ||||    
T  21639988 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttg 21639890  T
Q  189 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgt-tttgttcttc 286  Q
    |||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||||||||||    
T  21639889 taacactttcattatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctttttggtgtgtttgttcttc 21639790  T
Q  287 cttt 290  Q
    ||||    
T  21639789 cttt 21639786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 38 - 283
Target Start/End: Original strand, 24266054 - 24266302
Alignment:
Q  38 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacaccaaagggtagaat 135  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||  ||||||||  ||||||  |||| ||  ||||||||||||  |    
T  24266054 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggttgggaaattaccaaagggtagg-t 24266152  T
Q  136 ctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 233  Q
    |||||||||  || |||||||||||||| | |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  24266153 ctagggttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 24266251  T
Q  234 ttaggccatattggctgaactgggacaacaatctt-ctcggtgttttgttc 283  Q
    |||||||| ||||||||||||||| |||||||||| || ||||||||||||    
T  24266252 ttaggccacattggctgaactgggtcaacaatcttgcttggtgttttgttc 24266302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 89 - 290
Target Start/End: Original strand, 1533359 - 1533563
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgtt-catgtgtaaagcttgaaggctagagtt-cttgtaaccttt 186  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||||  ||||| | ||||||| ||||| | ||||  ||| ||||||||| ||    
T  1533359 ttttagggttcatattgtgagagtgggaaaacaccaaagggtagaatctaggtcttgtttcttgtgtaa-gcttgcaagctattgtttcttgtaaccctt 1533457  T
Q  187 tgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgt-tttgttct 284  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||||||||    
T  1533458 tgtaacactttcatcatattggattggagagatgctctctcccccagattaggccatattggctgaactgggtcaacaatcttattggtgtgtttgttct 1533557  T
Q  285 tccttt 290  Q
    | ||||    
T  1533558 ttcttt 1533563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 89 - 290
Target Start/End: Complemental strand, 21646186 - 21645984
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttg 188  Q
    ||||||||||||| |||||||||||||||||||| || ||||||||||||||  |||||| ||||||| ||||| | ||||   ||||||||||| |||     
T  21646186 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttt 21646088  T
Q  189 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgt-tttgttcttc 286  Q
    |||||||||| ||||| ||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||| | ||||| ||||||||||    
T  21646087 taacactttcatcatagtggattggagagctgctctcttccctagattaggccatattggctgaactgggtcaacaatctttttggtgtgtttgttcttc 21645988  T
Q  287 cttt 290  Q
    ||||    
T  21645987 cttt 21645984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 89 - 268
Target Start/End: Complemental strand, 18408943 - 18408764
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttg 188  Q
    ||||||||||||| |||||||||||||||||||| || |||||||| |||||  |||||| ||||||| ||||| | | ||   ||||||||||| ||||    
T  18408943 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgtaa-gcttgcaagttatttttcttgtaaccctttg 18408845  T
Q  189 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatctt 268  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18408844 taacactttcatcatactggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt 18408764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 38 - 305
Target Start/End: Original strand, 24261175 - 24261447
Alignment:
Q  38 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacaccaaagggtagaat 135  Q
    ||||| ||||||||  |||| |||||||||||  |||||||||||| |||||| ||  ||||||||  ||||||  |||| ||  ||||||||||||  |    
T  24261175 ctttgatgagagtgaatcttaggttgggaaaacaacattgtaatcatcttgggattatgggttcatagtgtgaggttgggaaattaccaaagggtagg-t 24261273  T
Q  136 ctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 233  Q
    |||||||||  || |||||||||||||| | |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  24261274 ctagggttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 24261372  T
Q  234 ttaggccatattggctgaactgggacaacaatctt-ctcggtgttttgttc--ttccttttatcgcttaccttgt 305  Q
    |||||||| ||||||||||||||| |||||||||| || ||||||||||||  || ||||||||| ||| |||||    
T  24261373 ttaggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttttcttttatcgtttatcttgt 24261447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 89 - 268
Target Start/End: Complemental strand, 18413819 - 18413641
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttg 188  Q
    ||||||||||||| |||||||||||||||||||| || |||||||| |||||  |||||| ||||||| ||||| |  |||   ||||||||||| ||||    
T  18413819 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaaactaggacttgttcttgtgtaa-gcttgcaatctatttttcttgtaaccctttg 18413721  T
Q  189 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatctt 268  Q
    |||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  18413720 taacactttcatcatagtggattggagagctgctctctcccc-agattaggccatattggctgaactgggtcaacaatctt 18413641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 38 - 305
Target Start/End: Complemental strand, 16885162 - 16884890
Alignment:
Q  38 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaac--accaaagggtaga 133  Q
    ||||| ||||||||  |||| |||||||||||  |||||||||||| |||||| ||  ||||||||  |||||| || ||||||   | ||||||||||     
T  16885162 ctttgatgagagtgaatcttaggttgggaaaacaacattgtaatcatcttgggattatgggttcatagtgtgag-gttgggaaatttatcaaagggtagg 16885064  T
Q  134 atctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccag 232  Q
     ||||||||||  || |||||||||||||| | |||||| ||||||||||  ||||||| || ||| |||||||||||||||||||||||||||||||||    
T  16885063 -tctagggttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactctttgtaaaacattcacatattggattggagagctgctctctcccccag 16884966  T
Q  233 attaggccatattggctgaactgggacaacaatctt-ctcggtgttttgttc--ttccttttatcgcttaccttgt 305  Q
    ||||||||| ||||||||||||||| |||||||||| || ||||||||||||  || ||||||||| ||| |||||    
T  16884965 attaggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttttcttttatcgtttatcttgt 16884890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 38 - 305
Target Start/End: Complemental strand, 16880306 - 16880034
Alignment:
Q  38 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaac--accaaagggtaga 133  Q
    ||||| ||||||||  |||| |||||| ||||  |||||||||||| |||||| ||  ||||||||  |||||| || ||||||   | ||||||||||     
T  16880306 ctttgatgagagtgaatcttaggttggaaaaacaacattgtaatcatcttgggattatgggttcatagtgtgag-gttgggaaatttatcaaagggtagg 16880208  T
Q  134 atctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccag 232  Q
     ||||||||||  || |||||||||||||| | |||||| ||||||||||  ||||||| || ||| |||||||||||||||||||||||||||||||||    
T  16880207 -tctagggttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactctttgtaaaacattcacatattggattggagagctgctctctcccccag 16880110  T
Q  233 attaggccatattggctgaactgggacaacaatctt-ctcggtgttttgttc--ttccttttatcgcttaccttgt 305  Q
    ||||||||| ||||||||||||||| |||||||||| || ||||||||||||  || ||||||||| ||| |||||    
T  16880109 attaggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttttcttttatcgtttatcttgt 16880034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 4873387 - 4873310
Alignment:
Q  11 caaaggagagaacca-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 87  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4873387 caaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 4873310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 20357331 - 20357410
Alignment:
Q  11 caaaggagagaaccat-gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    |||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20357331 caaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 20357410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 1533228 - 1533307
Alignment:
Q  11 caaaggagagaaccat-gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    |||||||| ||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1533228 caaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 1533307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 2058281 - 2058202
Alignment:
Q  11 caaaggagagaaccat-gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    |||||||| ||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2058281 caaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 2058202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 268
Target Start/End: Complemental strand, 29159982 - 29159803
Alignment:
Q  91 ttagggttcatgttgtgagagtggg-gaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaac-cttttg 188  Q
    ||||| ||||| ||||||||||||| || |||  || ||||||||  ||||  |||||| ||||||| ||||| | |||| | |||||||||| ||||||    
T  29159982 ttaggattcatattgtgagagtgggtgacacaaaaatgggtagaaattaggtcttgttcttgtgtaa-gcttgtaagcta-atttcttgtaactcttttg 29159885  T
Q  189 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| ||||| ||||||||||||||||||||||||| |||||||| |||||||| | |||||||| ||||||||||    
T  29159884 taacactttcatcatagtggattggagagctgctctctcccctagattaggtcatattggaccgaactgggtcaacaatctt 29159803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 184 - 267
Target Start/End: Complemental strand, 21983370 - 21983285
Alignment:
Q  184 ttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatct 267  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||| |||||||||    
T  21983370 ttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatct 21983285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 46516309 - 46516407
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| |||||||||||||| |||||||| |||||||| | |||||||| ||||||||||    
T  46516309 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccctagattaggtcatattggaccgaactgggtcaacaatctt 46516407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 268
Target Start/End: Complemental strand, 49091759 - 49091661
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| |||||||||||||||| ||||| |||||||||||| |||||||| |||||||||||| |||||||| || ||||||| ||||||||||    
T  49091759 ttcttgtaactcttttgtaacactttcatcatagtggattggagagttgctctcttccccagattaggtcatattggactaaactgggtcaacaatctt 49091661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 44848684 - 44848781
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg-gctgaactgggacaacaatctt 268  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||| ||||| |||||||  | |||||||| ||||||||||    
T  44848684 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccaggttaggtcatattgaaccgaactgggtcaacaatctt 44848781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 2647695 - 2647793
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatatt-ggctgaactgggacaacaatctt 268  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| |||||||||||||||||| |||| |||||| ||| ||| |||| ||||||||||    
T  2647695 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagaataggtcatattgggccgaattgggtcaacaatctt 2647793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 21640101 - 21640039
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||||||||| ||||||||||    
T  21640101 gggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaaacaccttgggt 21640039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 21646299 - 21646237
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||||||||| ||||||||||    
T  21646299 gggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaaacaccttgggt 21646237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 33332449 - 33332547
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggct-gaactgggacaacaatctt 268  Q
    |||||||||| |||||||||||||||| || || |||||||||| ||||||||||||||||||||||| |||||| | | |||||||| ||||||||||    
T  33332449 ttcttgtaactcttttgtaacactttcatcttagtggattggagggctgctctctcccccagattaggtcatattagatcgaactgggtcaacaatctt 33332547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 9190008 - 9190105
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||||   ||||||||||||| || || ||||||||||||||||||||||||||||| |||| |||||||| | |||||||| ||||||||||    
T  9190008 ttcttgtaactcattgtaacactttcatcttagtggattggagagctgctctctcccccagactaggtcatattggaccgaactgggtcaacaatctt 9190105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 268
Target Start/End: Complemental strand, 20284186 - 20284089
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||||   ||||||||||||| || || |||||||||| ||||||||||||||||||||||| |||||||| | |||||||| ||||||||||    
T  20284186 ttcttgtaacgcattgtaacactttcatcttagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 20284089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 268
Target Start/End: Complemental strand, 56045 - 55948
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| |||||||||| |||||||||||| |||||||| | |||||||| ||| ||||||    
T  56045 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctct-ccccagattaggtcatattggaccgaactgggtcaataatctt 55948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 18409055 - 18408993
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| | |||  ||||||||||||||||||||||||||| ||||||||||    
T  18409055 gggttgagtgtctttgtagtgaggatctcttgggttgggaaaaacattgtaaacaccttgggt 18408993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 173 - 268
Target Start/End: Complemental strand, 2580487 - 2580390
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||||   ||||||||||||| || || ||||||||||||||||||||||||||||| |||| |||||||| | ||| |||| ||||||||||    
T  2580487 ttcttgtaactcattgtaacactttcatcttagtggattggagagctgctctctcccccagactaggtcatattggaccgaattgggtcaacaatctt 2580390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 18413931 - 18413869
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| | |||  ||||||||||||||||||||| ||||| ||||||||||    
T  18413931 gggttgagtgtctttgtagtgaggatctcttgggttgggaaaaacaatgtaaacaccttgggt 18413869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 246
Target Start/End: Complemental strand, 35960901 - 35960839
Alignment:
Q  185 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg 246  Q
    |||||||||||||| ||||| ||| |||||| ||||||||||||||||||||||| |||||||    
T  35960901 tttgtaacactttcatcatagtggtttggagggctgctctctcccccagattaggtcatattg 35960839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 186 - 268
Target Start/End: Original strand, 9185178 - 9185262
Alignment:
Q  186 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||||||| || || |||||||||||||| |||||||||||||| ||||  ||||||| | |||||||| ||||||||||    
T  9185178 ttgtaacactttcatcttagtggattggagagcttctctctcccccagactaggttatattggaccgaactgggtcaacaatctt 9185262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 4796666 - 4796764
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| ||||||||||| |||| ||||| |||||| ||| |||||| |||||||||||||||| ||| |||| | ||||||||  |||||||||    
T  4796666 ttcttgtaactcttttgtaacaatttcatcatagtggatttgagggctgctttctcccccagattaggtcattttggaccgaactgggttaacaatctt 4796764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 205 - 247
Target Start/End: Original strand, 28617258 - 28617300
Alignment:
Q  205 tggattggagagctgctctctcccccagattaggccatattgg 247  Q
    ||||||||||||||||||||||||||||| |||| ||||||||    
T  28617258 tggattggagagctgctctctcccccagagtaggtcatattgg 28617300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 268
Target Start/End: Complemental strand, 47263757 - 47263678
Alignment:
Q  189 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| ||||| ||||||||||||||||  ||||||||| |||||| |||||||| | |||||||| ||||||||||    
T  47263757 taacactttcatcatagtggattggagagctgc--tctcccccatattaggtcatattggaccgaactgggtcaacaatctt 47263678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 268
Target Start/End: Complemental strand, 2479421 - 2479337
Alignment:
Q  185 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg-gctgaactgggacaacaatctt 268  Q
    |||||||||||||| ||||| |||||| ||||||||||||| |||| |||||||| |||||||  | |||||||| ||||||||||    
T  2479421 tttgtaacactttcatcatagtggatttgagagctgctctc-cccctagattaggtcatattgaaccgaactgggtcaacaatctt 2479337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 20284378 - 20284318
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  20284378 gggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttgggt 20284318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 23402821 - 23402881
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  23402821 gggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttgggt 23402881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 89
Target Start/End: Original strand, 4796477 - 4796536
Alignment:
Q  28 ggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    |||||||||||||||| | |||  |||||||||||||  |||||||||||| ||||||||||    
T  4796477 ggttgagtgtctttgtagtgaggatctcttgggttgg--aaaacattgtaaacaccttgggt 4796536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 184 - 267
Target Start/End: Complemental strand, 21988992 - 21988909
Alignment:
Q  184 ttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatct 267  Q
    ||||||||||||||| ||| | |||||||||||| ||  |||||| |||||||||| |||||||| | |||||||| |||||||||    
T  21988992 ttttgtaacactttcatcaaagtggattggagagttg--ctctcctccagattaggtcatattggaccgaactgggtcaacaatct 21988909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 44847933 - 44847991
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 87  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||    
T  44847933 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgg 44847991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 21989194 - 21989137
Alignment:
Q  30 ttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    |||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  21989194 ttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 21989137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 264
Target Start/End: Complemental strand, 31155971 - 31155911
Alignment:
Q  205 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaa 264  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||| ||||||    
T  31155971 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 31155911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 266; Significance: 1e-148; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 266; E-Value: 1e-148
Query Start/End: Original strand, 8 - 320
Target Start/End: Original strand, 9224230 - 9224543
Alignment:
Q  8 tagcaaaggagagaacca-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgt 106  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||  |||    
T  9224230 tagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggtttgggaaaacattgtaatcaccttgggttttagggttcatagtgt 9224329  T
Q  107 gagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattg 206  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9224330 gagagtggggaaacaccaaagggtagagtctagggtttgttcatgtgtaaagcttgaaggctagagttcttctaaccttttgtaacactttctcatattg 9224429  T
Q  207 gattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttccttttatcgcttaccttgtt 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| ||||||    
T  9224430 gattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttccttttaccgcttatcttgtt 9224529  T
Q  307 ttgctttggtatct 320  Q
    ||||||||||||||    
T  9224530 ttgctttggtatct 9224543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 8 - 320
Target Start/End: Original strand, 9229017 - 9229330
Alignment:
Q  8 tagcaaaggagagaacca-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgt 106  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||  |||    
T  9229017 tagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggtttgggaaaacattgtaatcaccttgggttttagggttcatagtgt 9229116  T
Q  107 gagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattg 206  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  9229117 gagagtggggaaacaccaaagggtagagtctagggtttgttcatgtgtaaagcttgaaggctagagttcttctaaccttttgtaacactttctcatattg 9229216  T
Q  207 gattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttccttttatcgcttaccttgtt 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||| ||||||    
T  9229217 gattggagagctgctctctcccccagattaggccatattggctgaactgggttaacaatcttctcggtgttttgttcttccttttaccgcttatcttgtt 9229316  T
Q  307 ttgctttggtatct 320  Q
    ||||||||||||||    
T  9229317 ttgctttggtatct 9229330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 12 - 320
Target Start/End: Complemental strand, 51520715 - 51520405
Alignment:
Q  12 aaaggagagaacca-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgtgaga 110  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||  ||||    
T  51520715 aaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatattaagaga 51520616  T
Q  111 gtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggatt 210  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51520615 gtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggatt 51520516  T
Q  211 ggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttccttttatcgcttaccttgttt-tg 309  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||| ||    
T  51520515 ggagagctgctctctcccccagattaggccatattggcagaactgggtcaacaatcttctcggtgttttgttcttccttttatcacttatcttgtttatg 51520416  T
Q  310 ctttggtatct 320  Q
    ||||| |||||    
T  51520415 ctttgttatct 51520405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 25 - 320
Target Start/End: Original strand, 45347658 - 45347955
Alignment:
Q  25 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacacca 124  Q
    ||||| || ||| ||||| |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||  |||||||||||| ||| ||||    
T  45347658 atggggtgtgtgcctttgatgagagtgtctcttaggttgggaaaaacattgtaatcaccttggggtttagggttcatagtgtgagagtgggaaaatacca 45347757  T
Q  125 aagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctc 224  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45347758 aagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagaggtcttgtaaccttttgtaacactttctcatattggattggagagctgctctc 45347857  T
Q  225 tcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttc-ttccttttatcgcttaccttgttt-tgctttggtatct 320  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||| ||||||| |||||||| ||||    
T  45347858 tcccccagattaagccatattggctgaactgggtcaacaatcttctcggtgttttgttctttccttttaccgcttatcttgtttgtgctttggaatct 45347955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 25 - 320
Target Start/End: Original strand, 45357138 - 45357434
Alignment:
Q  25 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacacca 124  Q
    ||||| || ||| ||||| |||||| || |||| |||||||||||||||||||||||||||||| ||||||||||||  |||||||||||| ||| ||||    
T  45357138 atggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttggggtttagggttcatagtgtgagagtgggaaaatacca 45357237  T
Q  125 aagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctc 224  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45357238 aagggtagaatctagggtttgttcatgtgtaaagcttgaaagctagagt-cttgtaaccttttgtaacactttctcatattggattggagagctgctctc 45357336  T
Q  225 tcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttc-ttccttttatcgcttaccttgttt-tgctttggtatct 320  Q
    |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |||||| ||||||| |||||||| ||||    
T  45357337 tcccccagattatgccatattggctgaactgggtcaacaatcttctcggtgttttgttctttccttttaccgcttatcttgtttgtgctttggaatct 45357434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 25 - 290
Target Start/End: Complemental strand, 3814266 - 3814002
Alignment:
Q  25 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacacca 124  Q
    ||||| || ||||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||| ||||    
T  3814266 atggggtgtgtgtctttgatgagagtgtttcttaggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaatacca 3814167  T
Q  125 aagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctc 224  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  3814166 aagggtaga-tctagggtttgttcatgtgtaaagcttgaaagctagagt-cttgtaaccttttgtaacactttcacatattggattggagagctgctctc 3814069  T
Q  225 tcccccagattaggccatattggctgaactgggacaacaatctt-ctcggtgttttgttcttccttt 290  Q
    ||||||||||||||||||||||||||||||||| |||||||||| |  |||||||||||||||||||    
T  3814068 tcccccagattaggccatattggctgaactgggtcaacaatcttgcatggtgttttgttcttccttt 3814002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 25 - 268
Target Start/End: Complemental strand, 5732907 - 5732666
Alignment:
Q  25 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacacca 124  Q
    ||||| || ||| ||||| ||||||||| |||| |||||||||||||||||||||||||||||| || |||||| ||  |||||||||||| ||| ||||    
T  5732907 atggggtgtgtgcctttgatgagagtgtttcttaggttgggaaaaacattgtaatcaccttgggattaagggtttatagtgtgagagtgggaaaatacca 5732808  T
Q  125 aagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctc 224  Q
    ||||||||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5732807 aagggtaga-tctagggtttgttcatgtgtaaagcttgaaagctagagt-cttgtaaccttttgtaacactttctcatattggattggagagctgctctc 5732710  T
Q  225 tcccccagattaggccatattggctgaactgggacaacaatctt 268  Q
    ||||||||||||||||||||||||||||||||| ||||||||||    
T  5732709 tcccccagattaggccatattggctgaactgggtcaacaatctt 5732666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 89 - 320
Target Start/End: Complemental strand, 24742121 - 24741890
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaacctttt 187  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||  ||| ||||||||| |||    
T  24742121 ttttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 24742023  T
Q  188 gtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttc 286  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  24742022 gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttcttc 24741923  T
Q  287 cttttatcgcttaccttgttttgctttggtatct 320  Q
    | ||| | ||||| ||||||||||||||||||||    
T  24741922 c-tttcttgcttatcttgttttgctttggtatct 24741890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 137 - 320
Target Start/End: Original strand, 56146664 - 56146848
Alignment:
Q  137 tagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagatta 236  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  56146664 tagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagatta 56146763  T
Q  237 ggccatattggctgaactgggacaacaatcttctcggtgttttgttcttccttttatcgcttaccttgttt-tgctttggtatct 320  Q
    ||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||| |||||    
T  56146764 ggccatattggctgaactggaccaacaatcttctcggtgttttgttcttccttttatcacttatcttgtttatgctttgttatct 56146848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 38 - 307
Target Start/End: Complemental strand, 18855956 - 18855687
Alignment:
Q  38 ctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatct 137  Q
    ||||| |||||| || |||| |||||||||||||||||||||||||||||| ||  ||||||||  |||||||||||| ||| ||||||||||||  |||    
T  18855956 ctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttgggattgtgggttcatagtgtgagagtgggaaaataccaaagggtagt-tct 18855858  T
Q  138 agggtttgttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagatta 236  Q
    |||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  18855857 agggtttgttcatgtgtaaagcttgataagctagagt-cttgtaaccttttgtaacactt-cacatattggattggagagctgctctctcccccagatta 18855760  T
Q  237 ggccatattggctgaactgggacaacaatctt-ctcggtgttttgttc-ttccttttatcgcttaccttgttt 307  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||| || ||| |||||||    
T  18855759 ggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgttt 18855687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 91 - 314
Target Start/End: Complemental strand, 29760821 - 29760597
Alignment:
Q  91 ttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgtt-catgtgtaaagcttgaaggctagagtt-cttgtaaccttttg 188  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||  ||||| | ||||||| ||||| ||||||  ||| ||||||||| ||||    
T  29760821 ttagggttcatagtgtgagagtggggaaacaccaaagggtagaatctaggtcttgtttcttgtgtaa-gcttgcaggctattgtttcttgtaaccctttg 29760723  T
Q  189 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttcc 287  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  29760722 taacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttcttcc 29760623  T
Q  288 ttttatcgcttaccttgttttgctttg 314  Q
     ||| | ||||| ||||||||||||||    
T  29760622 -tttcttgcttatcttgttttgctttg 29760597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 18712589 - 18712677
Alignment:
Q  8 tagcaaaggagagaacca-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagg 95  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  18712589 tagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgttatcaccttgggttttagg 18712677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 89 - 290
Target Start/End: Original strand, 31985552 - 31985752
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttg 188  Q
    ||||||||||||  ||||||||||||| |||||| || ||||||||  ||||  |||||| ||||||| ||||| | ||||   ||||||||||| ||||    
T  31985552 ttttagggttcacattgtgagagtggg-aaacacaaatgggtagaaattaggacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttg 31985649  T
Q  189 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatcttctcggtgt-tttgttctt 285  Q
    |||||||||| ||||| ||||||||||||||||||||| |||||||||||| |||||||| | |||||||| |||||||||| | ||||| |||||||||    
T  31985650 taacactttcatcatagtggattggagagctgctctct-ccccagattaggtcatattggaccgaactgggtcaacaatctt-ttggtgtgtttgttctt 31985747  T
Q  286 ccttt 290  Q
    |||||    
T  31985748 ccttt 31985752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 186 - 290
Target Start/End: Original strand, 28468542 - 28468647
Alignment:
Q  186 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgt-tttgttc 283  Q
    ||||||||||||| ||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||| | ||||| |||||||    
T  28468542 ttgtaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattggctgaactgggtcaacaatctt-ttggtgtgtttgttc 28468640  T
Q  284 ttccttt 290  Q
    |||||||    
T  28468641 ttccttt 28468647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 24742253 - 24742174
Alignment:
Q  11 caaaggagagaaccat-gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    |||||||| ||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24742253 caaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 24742174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 268
Target Start/End: Complemental strand, 10047477 - 10047379
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| |||||||| | |||||||| ||||||||||    
T  10047477 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 10047379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 268
Target Start/End: Complemental strand, 39246092 - 39245994
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| |||||||| | |||||||| ||||||||||    
T  39246092 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 39245994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 36315229 - 36315326
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||| ||||| ||||    
T  36315229 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacattctt 36315326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 36329438 - 36329535
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||| ||||| ||||    
T  36329438 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacattctt 36329535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 29760954 - 29760874
Alignment:
Q  11 caaaggagagaaccat-gggttgagtgtctttgttgagagtgtctcttgggttggga-aaaacattgtaatcaccttgggt 89  Q
    |||||||| ||||||  ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  29760954 caaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaaacattgtaatcaccttgggt 29760874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 16623292 - 16623390
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg-gctgaactgggacaacaatctt 268  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||| |||||||||| |||||||  | |||||||| ||||||||||    
T  16623292 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattgaaccgaactgggtcaacaatctt 16623390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 5396671 - 5396768
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||||  |||| ||||||||| ||||| ||||||||||||||||||||||| |||||||||| |||||||| | |||||||| ||||||||||    
T  5396671 ttcttgtaactctttgcaacactttcatcatagtggattggagagctgctctctcctccagattaggtcatattggaccgaactgggtcaacaatctt 5396768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 268
Target Start/End: Original strand, 38152449 - 38152536
Alignment:
Q  183 cttttgtaacactttctc-atattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||||||||| | ||| |||||||||||||||||||||||||||||||| | |||||||| | |||||||| ||||||||||    
T  38152449 cttttgtaacactttcaccatagtggattggagagctgctctctcccccagattatgtcatattggaccgaactgggtcaacaatctt 38152536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 3796518 - 3796616
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| |||||||||||||||| ||||| |||||| ||||| |||||||||||||| |||||| |||||||| | |||||||| ||||||||||    
T  3796518 ttcttgtaactcttttgtaacactttcatcatagtggattagagagttgctctctcccccatattaggtcatattggacggaactgggtcaacaatctt 3796616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 184 - 267
Target Start/End: Complemental strand, 5143345 - 5143260
Alignment:
Q  184 ttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatct 267  Q
    ||||||||||||||| ||||| ||| |||||||||||||||||||||||||||||| |||||||| | ||||| || |||||||||    
T  5143345 ttttgtaacactttcatcatagtgggttggagagctgctctctcccccagattaggtcatattggaccgaactaggtcaacaatct 5143260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 186 - 268
Target Start/End: Original strand, 5269204 - 5269288
Alignment:
Q  186 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| |||||||| | ||||| || ||||||||||    
T  5269204 ttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactaggtcaacaatctt 5269288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 184 - 267
Target Start/End: Complemental strand, 5147763 - 5147678
Alignment:
Q  184 ttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatct 267  Q
    ||||||||||||||| ||||| |||| ||||||||||||| |||||||| |||||| |||||||| | |||||||| |||||||||    
T  5147763 ttttgtaacactttcatcataatggactggagagctgctccctcccccaaattaggtcatattggaccgaactgggtcaacaatct 5147678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 183 - 247
Target Start/End: Complemental strand, 24333896 - 24333831
Alignment:
Q  183 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 247  Q
    |||||||||||| ||| ||||| ||||||||||||||||||||||||||| |||||| ||||||||    
T  24333896 cttttgtaacacgttcatcatagtggattggagagctgctctctcccccaaattaggtcatattgg 24333831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 3777646 - 3777550
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatct 267  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||| |||||||| | ||||||||  ||||||| | |||||||| |||||||||    
T  3777646 ttcttgtaactctttgtaacactttcatcatagtggattggagagctactctctcctctagattaggttatattggaccgaactgggtcaacaatct 3777550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 16630679 - 16630755
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 247  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||||||| ||||||| |||||||| | ||||||||    
T  16630679 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgttctctcctccagattatgtcatattgg 16630755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 183 - 263
Target Start/End: Original strand, 6743425 - 6743507
Alignment:
Q  183 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaaca 263  Q
    |||||||||||||||| ||||| |||||||||| |||||||||||||  |||||||| |||||||| | |||||||| |||||    
T  6743425 cttttgtaacactttcatcatagtggattggagggctgctctctcccgtagattaggtcatattggaccgaactgggtcaaca 6743507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 89 - 140
Target Start/End: Original strand, 28468455 - 28468506
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagg 140  Q
    ||||||||||||| ||| |||||||||||||||| || ||||||||||||||    
T  28468455 ttttagggttcatattgagagagtggggaaacacaaatgggtagaatctagg 28468506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 28468342 - 28468404
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||| ||||||||||| | |||  ||||||||||||||||||| ||||||| ||||||||||    
T  28468342 gggttaagtgtctttgtagtgaggatctcttgggttgggaaaaatattgtaaacaccttgggt 28468404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 89
Target Start/End: Complemental strand, 5112523 - 5112466
Alignment:
Q  30 ttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    |||||||||||||||| |||  ||||||||||||||  ||||||||||| ||||||||||    
T  5112523 ttgagtgtctttgttgtgaggttctcttgggttggg--aaacattgtaaacaccttgggt 5112466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 39774304 - 39774380
Alignment:
Q  173 ttcttgtaacct-tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 247  Q
    |||||||||||| |||||| ||||||| |  || ||||||||||||||||||| ||||||||| |||| ||||||||    
T  39774304 ttcttgtaacctatttgtatcactttcattttagtggattggagagctgctctatcccccagagtaggtcatattgg 39774380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 3777838 - 3777778
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  3777838 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 3777778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 5396479 - 5396539
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  5396479 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 5396539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 16623101 - 16623161
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  16623101 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 16623161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 16628680 - 16628740
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  16628680 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 16628740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 87
Target Start/End: Original strand, 5269008 - 5269066
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 87  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||    
T  5269008 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgg 5269066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 30 - 89
Target Start/End: Original strand, 6743226 - 6743283
Alignment:
Q  30 ttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    |||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  6743226 ttgagtgtctttgtagcgaggatctcttgggttggg--aaacattgtaaacaccttgggt 6743283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 264
Target Start/End: Complemental strand, 16931849 - 16931789
Alignment:
Q  205 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaa 264  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||| ||||||    
T  16931849 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 16931789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 264
Target Start/End: Complemental strand, 16934203 - 16934143
Alignment:
Q  205 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaa 264  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||| ||||||    
T  16934203 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 16934143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 264
Target Start/End: Complemental strand, 22780433 - 22780373
Alignment:
Q  205 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaa 264  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||| ||||||    
T  22780433 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 22780373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 86
Target Start/End: Original strand, 25861841 - 25861898
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttg 86  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| |||||||    
T  25861841 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttg 25861898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 264
Target Start/End: Complemental strand, 44599898 - 44599838
Alignment:
Q  205 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaa 264  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||| ||||||    
T  44599898 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 44599838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 8 - 320
Target Start/End: Original strand, 34885 - 35198
Alignment:
Q  8 tagcaaaggagagaacca-tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgt 106  Q
    ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||  |||    
T  34885 tagcaaaggagggaaccaatgggttgagtgtctttgttgagagtgtctcttgggtttgggaaaacattgtaatcaccttgggttttagggttcatagtgt 34984  T
Q  107 gagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattg 206  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  34985 gagagtggggaaacaccaaagggtagagtctagggtttgttcatgtgtaaagcttgaaggctagagttcttctaaccttttgtaacactttctcatattg 35084  T
Q  207 gattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttccttttatcgcttaccttgtt 306  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||| |||||| ||||||    
T  35085 gattggagagctgctctctcccccagattaggccatattggctgaactgggttaacaatcttctcggtgttttgttcttccttttaccgcttatcttgtt 35184  T
Q  307 ttgctttggtatct 320  Q
    ||||||||||||||    
T  35185 ttgctttggtatct 35198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 237; Significance: 1e-131; HSPs: 53)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 8 - 320
Target Start/End: Original strand, 39811811 - 39812125
Alignment:
Q  8 tagcaaaggagagaacca--tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttg 105  Q
    ||||||||||| ||||||  |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||  ||    
T  39811811 tagcaaaggagggaaccaaatgggttgagtgtctttgttgagagtgtctcttaggttgagaaaaacattgtaatcaccttgggttttagggttcatagtg 39811910  T
Q  106 tgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatatt 205  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  39811911 tgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagag-tcttgtaaccttttgtaacactttctcatatt 39812009  T
Q  206 ggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttccttttatcgcttaccttgt 305  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||| |||||| |||||    
T  39812010 ggattggagagctgctctctcccccagattaggccatattggctgaactggttcaacaatcttctcggtgttttgttctttcttttaccgcttatcttgt 39812109  T
Q  306 tt-tgctttggtatct 320  Q
    || |||||||| ||||    
T  39812110 ttgtgctttggaatct 39812125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 123 - 320
Target Start/End: Original strand, 44312563 - 44312760
Alignment:
Q  123 caaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctc 222  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44312563 caaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctc 44312662  T
Q  223 tctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttccttttatcgcttaccttgttttgctttggtatct 320  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  44312663 tctcccccagattaggccatattggctgaactgggtcaacaatcttctcggtgttttgttcttccttttatcgcttatcttgttttgctttggtatct 44312760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 25 - 291
Target Start/End: Complemental strand, 32247031 - 32246765
Alignment:
Q  25 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacacca 124  Q
    ||||| || ||| ||||| ||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||||  |||||||||||| ||| ||||    
T  32247031 atggggtgtgtgcctttgatgagagtgtttcttaggttgggaaaaacattgtaatcaccttgggatttagggttcatagtgtgagagtgggaaaatacca 32246932  T
Q  125 aagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctc 224  Q
    ||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32246931 aagggtataatctagggtttgttcatgtgtaaagcttgaaagctagag-tcttgtaaccttttgtaacactttctcatattggattggagagctgctctc 32246833  T
Q  225 tcccccagattaggccatattggctgaactgggacaacaatctt-ctcggtgttttgttcttcctttt 291  Q
    |||||||||||||||||||||||||||||  || ||||||||||  ||||||||||||||||||||||    
T  32246832 tcccccagattaggccatattggctgaacaaggtcaacaatcttgttcggtgttttgttcttcctttt 32246765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 89 - 320
Target Start/End: Original strand, 11098843 - 11099074
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaacctttt 187  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| | ||||  ||| ||||||||| |||    
T  11098843 ttttagggttcatattgtgagagtggggaaacaccaaagggtagaatctagggtttgttcttgtgtaa-gcttgcaagctattgtttcttgtaacccttt 11098941  T
Q  188 gtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttc 286  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  11098942 gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttcttc 11099041  T
Q  287 cttttatcgcttaccttgttttgctttggtatct 320  Q
    ||||  || |||| ||||||||||||||||||||    
T  11099042 ctttcttc-cttatcttgttttgctttggtatct 11099074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 89 - 320
Target Start/End: Complemental strand, 14291669 - 14291438
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaacctttt 187  Q
    ||||||||||||| ||||||||||||||||||||  | ||||||||||||||| |||||| ||||||| ||||||||||||  ||| ||||||||| |||    
T  14291669 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtgtaa-gcttgaaggctattgtttcttgtaacccttt 14291571  T
Q  188 gtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttc 286  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  14291570 gtaacactttcatcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttcttc 14291471  T
Q  287 cttttatcgcttaccttgttttgctttggtatct 320  Q
    | ||| | ||||| |||||||||||||| |||||    
T  14291470 c-tttcttgcttatcttgttttgctttgttatct 14291438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 38 - 305
Target Start/End: Complemental strand, 19344655 - 19344382
Alignment:
Q  38 ctttgttgagagtgtctcttgggttgggaaaaaca---ttgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacaccaaagggtagaa 134  Q
    ||||| ||||||||| |||| ||||||||||||||   |||||||||||||||| ||  ||||||||  |||||| ||||| ||| ||||||||||||      
T  19344655 ctttgatgagagtgtttcttaggttgggaaaaacaacattgtaatcaccttgggattatgggttcatagtgtgagggtgggaaaataccaaagggtagg- 19344557  T
Q  135 tctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccag 232  Q
    ||||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||| ||    
T  19344556 tctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccctag 19344458  T
Q  233 attaggccatattggctgaactgggacaacaatctt-ctcggtgttttgttc--ttccttttatcgcttaccttgt 305  Q
    ||||||||| ||||||||||||||| |||||||||| |||||||||||||||  |||||||||||| ||| |||||    
T  19344457 attaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttcttttccttttatcgtttatcttgt 19344382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 38 - 305
Target Start/End: Complemental strand, 19349513 - 19349240
Alignment:
Q  38 ctttgttgagagtgtctcttgggttgggaaaaaca---ttgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacaccaaagggtagaa 134  Q
    ||||| ||||||||| |||| ||||||||||||||   |||||||||||||||| ||  ||||||||  |||||| ||||| ||| ||||||||||||      
T  19349513 ctttgatgagagtgtttcttaggttgggaaaaacaacattgtaatcaccttgggattatgggttcatagtgtgagggtgggaaaataccaaagggtagg- 19349415  T
Q  135 tctagggtttgttcatgtgtaaagcttgaag-gctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccag 232  Q
    ||||||||||||||||||||||||||||||  |||||| |||||||||| |||||||||||| ||| |||||||||||||||||||||||||||||| ||    
T  19349414 tctagggtttgttcatgtgtaaagcttgaaaagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccctag 19349316  T
Q  233 attaggccatattggctgaactgggacaacaatctt-ctcggtgttttgttc--ttccttttatcgcttaccttgt 305  Q
    ||||||||| ||||||||||||||| |||||||||| |||||||||||||||  |||||||||||| ||| |||||    
T  19349315 attaggccacattggctgaactgggtcaacaatcttgctcggtgttttgttcttttccttttatcgtttatcttgt 19349240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 89 - 320
Target Start/End: Original strand, 9296317 - 9296548
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaacctttt 187  Q
    ||||||||||||| ||||||||||||||||||||  | ||||||||||||||| |||||| ||| ||| ||||||||||||  ||| ||||||||| |||    
T  9296317 ttttagggttcatattgtgagagtggggaaacacatatgggtagaatctagggcttgttcttgtataa-gcttgaaggctattgtttcttgtaacccttt 9296415  T
Q  188 gtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttc 286  Q
    ||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  9296416 gtaacactttcatcatattggattggagagctgctctctcccccaaattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttcttc 9296515  T
Q  287 cttttatcgcttaccttgttttgctttggtatct 320  Q
    | ||| | ||||  |||||||||||||| |||||    
T  9296516 c-tttcttgcttttcttgttttgctttgttatct 9296548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 89 - 290
Target Start/End: Complemental strand, 3491930 - 3491729
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttg 188  Q
    ||||||||||||| |||||||||||||||||||| || ||||||||||||||  |||||| ||||||| ||||| | ||||   ||||||||||| ||||    
T  3491930 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttg 3491832  T
Q  189 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgt-tttgttcttc 286  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||||||||||    
T  3491831 taacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctt-ttggtgtgtttgttcttc 3491733  T
Q  287 cttt 290  Q
    ||||    
T  3491732 cttt 3491729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 89 - 290
Target Start/End: Complemental strand, 25398675 - 25398473
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttg 188  Q
    ||||||||||||| |||||||||||| ||||||| || |||||||| |||||  |||||| ||||||| ||||| | ||||   ||||||||||| ||||    
T  25398675 ttttagggttcatattgtgagagtggagaaacacaaatgggtagaaactaggacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttg 25398577  T
Q  189 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgt-tttgttcttc 286  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| | ||||| ||||||||||    
T  25398576 taacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggctgaactgggtcaacaatctttttggtgtgtttgttcttc 25398477  T
Q  287 cttt 290  Q
    ||||    
T  25398476 cttt 25398473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 89 - 290
Target Start/End: Complemental strand, 25403813 - 25403611
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttg 188  Q
    ||||||||||||| |||||||||||| ||||||| || |||||||| |||||  |||||| ||||||| ||||| | ||||   ||||||||||| ||||    
T  25403813 ttttagggttcatattgtgagagtggagaaacacaaatgggtagaaactaggacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttg 25403715  T
Q  189 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgt-tttgttcttc 286  Q
    |||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||| | |||||||||| | ||||| ||||||||||    
T  25403714 taacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggctgaactgagtcaacaatctttttggtgtgtttgttcttc 25403615  T
Q  287 cttt 290  Q
    ||||    
T  25403614 cttt 25403611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 89 - 238
Target Start/End: Complemental strand, 25407802 - 25407653
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttg 188  Q
    ||||||||||||| |||||||||||| ||||||| || |||||||| |||||  |||||| ||||||| ||||| | ||||   ||||||||||| ||||    
T  25407802 ttttagggttcatattgtgagagtggagaaacacaaatgggtagaaactaggacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttg 25407704  T
Q  189 taacactttc-tcatattggattggagagctgctctctcccccagattagg 238  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||    
T  25407703 taacactttcatcatagtggattggagagctgctctctcccccagattagg 25407653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 89 - 290
Target Start/End: Complemental strand, 40739012 - 40738822
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttg 188  Q
    ||||||||||||| |||||||||||||||||||| || |||||||| ||| |  |||||| ||||||| ||||| | ||||   ||||||||||          
T  40739012 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaaactaagacttgttcttgtgtaa-gcttgcaagctatttttcttgtaac------ 40738920  T
Q  189 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgt-tttgttcttc 286  Q
        |||||| ||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||| |||||||||| | ||||| ||||||||||    
T  40738919 ----actttcatcatagtggattggagagctgctctc-cccccagattaggtcatattggctgaactgggtcaacaatctt-ttggtgtgtttgttcttc 40738826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 183 - 268
Target Start/End: Complemental strand, 8040147 - 8040060
Alignment:
Q  183 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||    
T  8040147 cttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggactgaactgggtcaacaatctt 8040060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 11098711 - 11098790
Alignment:
Q  11 caaaggagagaaccat-gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    |||||||| ||||||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  11098711 caaaggagggaaccaaagggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 11098790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 265
Target Start/End: Complemental strand, 13569506 - 13569331
Alignment:
Q  91 ttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaac-cttttgt 189  Q
    ||||| ||||| |||||||||||||  |  | ||||||||||||  ||||  |||||| |||||||| |||  | |||| | |||||||||| |||||||    
T  13569506 ttaggattcatattgtgagagtgggtgacaaacaaagggtagaaattaggtcttgttcttgtgtaaa-cttataagcta-atttcttgtaactcttttgt 13569409  T
Q  190 aacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaat 265  Q
    ||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||| |||||||    
T  13569408 aacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaat 13569331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 268
Target Start/End: Complemental strand, 21630041 - 21629944
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||| |||||||| |||||||||| ||||||||||    
T  21630041 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctct-ccccagattaggtcatattggactgaactgggtcaacaatctt 21629944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 28259177 - 28259274
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||||  |||||||||||||| ||||| ||||||||||||||||||||||||||| |||||| |||||||| | |||||||| ||||||||||    
T  28259177 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccaaattaggtcatattggaccgaactgggtcaacaatctt 28259274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 9296186 - 9296265
Alignment:
Q  11 caaaggagagaaccat-gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    |||||||| ||||||  ||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||    
T  9296186 caaaggagggaaccaaagggttgagtgtctttgtagaaagtgtctattgggttgggaaaaacattgtaatcaccttgggt 9296265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 11 - 89
Target Start/End: Complemental strand, 14291801 - 14291722
Alignment:
Q  11 caaaggagagaaccat-gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    |||||||| ||||||  |||||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  14291801 caaaggagggaaccaaagggttgagcgtctttgtagatagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 14291722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 10445443 - 10445541
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| |||||||||||||||| | ||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||  ||||||||||    
T  10445443 ttcttgtaactcttttgtaacactttcataatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactggatcaacaatctt 10445541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 268
Target Start/End: Complemental strand, 17865301 - 17865203
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatatt-ggctgaactgggacaacaatctt 268  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| | ||||||||||||||||||||| |||||| | |||||||||| ||||||||||    
T  17865301 ttcttgtaactcttttgtaacactttcatcatagtggattggagggttgctctctcccccagattaggtcatattcgactgaactgggtcaacaatctt 17865203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 268
Target Start/End: Complemental strand, 20522318 - 20522220
Alignment:
Q  173 ttcttgtaacc-ttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||||| ||||||||||||||| ||||| |||||||||| | ||||||||||||||||||||| |||||||| | |||||||| ||||||||||    
T  20522318 ttcttgtaacccttttgtaacactttcatcatagtggattggagggttgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 20522220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 34682333 - 34682431
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| |||||||||||||||| | ||| |||||||||||||||||||||||||||||||| | |||||||| | |||||||| ||||||||||    
T  34682333 ttcttgtaactcttttgtaacactttcattatagtggattggagagctgctctctcccccagattatgtcatattggaccgaactgggtcaacaatctt 34682431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 34388956 - 34388859
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatct 267  Q
    |||||||||| |||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||| |||||||| | ||| |||| |||||||||    
T  34388956 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctactctctcccccagattaggtcatattggaccgaattgggtcaacaatct 34388859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 14699007 - 14699104
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| |||||||||| ||||| ||||| |||||||||| ||||||||||||||||||||||| |||||||| | |||||||| ||||||||||    
T  14699007 ttcttgtaactcttttgtaac-ctttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 14699104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 25409922 - 25409860
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||||||||| ||||||||||    
T  25409922 gggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaaacaccttgggt 25409860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 173 - 267
Target Start/End: Original strand, 10707251 - 10707348
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatct 267  Q
    |||||||||| |||||||||||||||| ||||| |||||||||||| || ||||||||||| |||||| |||||||| | |||||||| |||||||||    
T  10707251 ttcttgtaactcttttgtaacactttcatcatagtggattggagagttgttctctcccccatattaggtcatattggaccgaactgggtcaacaatct 10707348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 173 - 265
Target Start/End: Original strand, 8390149 - 8390244
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaat 265  Q
    |||||||||| ||||| |||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||| |||| | |||||||| |||||||    
T  8390149 ttcttgtaactcttttttaacactttcatcatagtggattggagagctgctctctcccccaaattaggtcattttggaccgaactgggtcaacaat 8390244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 183 - 246
Target Start/End: Complemental strand, 31056131 - 31056067
Alignment:
Q  183 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg 246  Q
    |||||||||||||||| || || ||||||||||||||||||||||||| |||||||| |||||||    
T  31056131 cttttgtaacactttcatcttagtggattggagagctgctctctcccctagattaggtcatattg 31056067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 42039669 - 42039744
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 247  Q
    ||||||||||  || ||||||||||| ||||| |||||| ||||||||||||||||| ||||||||| ||||||||    
T  42039669 ttcttgtaactcttcgtaacactttcatcatagtggattagagagctgctctctcccacagattaggtcatattgg 42039744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 3492043 - 3491981
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| | |||  ||||||||||||| ||||||||||||| ||||||||||    
T  3492043 gggttgagtgtctttgtagtgaggatctcttgggttggaaaaaacattgtaaacaccttgggt 3491981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 184 - 268
Target Start/End: Complemental strand, 33118222 - 33118136
Alignment:
Q  184 ttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||| ||||| ||||| |||||||||| |||||||||||||||| |||||| |||||||| | |||||| | ||||||||||    
T  33118222 ttttgtaactctttcatcatagtggattggagggctgctctctcccccaaattaggtcatattggaccgaactgagccaacaatctt 33118136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 33528620 - 33528718
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| | ||||||||  |||| |||||| |||||||| | |||||||| ||||||||||    
T  33528620 ttcttgtaactcttttgtaacactttcatcatagtggattggagggttgctctctttcccatattaggtcatattggaccgaactgggtcaacaatctt 33528718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 173 - 268
Target Start/End: Complemental strand, 39483029 - 39482931
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| ||||||||||| |||| ||||| ||||||||||  ||||||||||||||| |||||| |||||||| | ||||| || ||||||||||    
T  39483029 ttcttgtaactcttttgtaacattttcatcatagtggattggaggcctgctctctcccccatattaggtcatattggaccgaactaggtcaacaatctt 39482931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 23078470 - 23078567
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggct-gaactgggacaacaatctt 268  Q
    ||||||||||  ||| |||||||||| ||||| |||||||||||| || ||||||||||| |||||| |||||||| | |||||||| ||||| ||||    
T  23078470 ttcttgtaactctttctaacactttcatcatagtggattggagagttgttctctcccccatattaggtcatattggatcgaactgggtcaacattctt 23078567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 268
Target Start/End: Original strand, 16940219 - 16940306
Alignment:
Q  183 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||||||||| ||||| |||||||||| |||| ||| |||||||||||| | |||||||| | ||| |||| ||||||||||    
T  16940219 cttttgtaacactttcatcatagtggattggagggctgatctttcccccagattatgtcatattggaccgaattgggtcaacaatctt 16940306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 183 - 268
Target Start/End: Original strand, 17010884 - 17010971
Alignment:
Q  183 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||||||||| ||||| |||||||||| |||| ||| |||||||||||| | |||||||| | ||| |||| ||||||||||    
T  17010884 cttttgtaacactttcatcatagtggattggagggctgatctttcccccagattatgtcatattggaccgaattgggtcaacaatctt 17010971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 185 - 268
Target Start/End: Original strand, 36757774 - 36757859
Alignment:
Q  185 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||| ||||||||| ||||| ||||||||||||||| | || ||||||||||||| |||||||| | ||| |||| ||||||||||    
T  36757774 tttgaaacactttcatcatactggattggagagctgttatcccccccagattaggtcatattggaccgaattgggtcaacaatctt 36757859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 185 - 247
Target Start/End: Original strand, 27149306 - 27149369
Alignment:
Q  185 tttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 247  Q
    |||||| ||||||| | ||| ||||||||||||||||||||||||||| | |||| ||||||||    
T  27149306 tttgtatcactttcattatagtggattggagagctgctctctcccccatagtaggtcatattgg 27149369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 36757570 - 36757630
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  36757570 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 36757630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 39483222 - 39483162
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||||| |||  ||||||||||||||  ||| ||||||| ||||||||||    
T  39483222 gggttgagtgtctttgttgtgaggatctcttgggttggg--aaatattgtaaacaccttgggt 39483162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 89
Target Start/End: Complemental strand, 40739123 - 40739063
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  40739123 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 40739063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 278
Target Start/End: Original strand, 2838063 - 2838136
Alignment:
Q  205 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatcttctcggtgttt 278  Q
    |||||||||||  |||||||||||||||| |||| |||||||| | |||||||| ||||||| |||| |||||||    
T  2838063 tggattggagatgtgctctctcccccagagtaggtcatattggaccgaactgggtcaacaat-ttcttggtgttt 2838136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 265
Target Start/End: Original strand, 1345574 - 1345635
Alignment:
Q  205 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaat 265  Q
    ||||| |||||| |||||||||||||||| |||| |||||||| | |||||||| |||||||    
T  1345574 tggatcggagaggtgctctctcccccagagtaggtcatattggaccgaactgggtcaacaat 1345635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 89
Target Start/End: Complemental strand, 21630232 - 21630174
Alignment:
Q  29 gttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  21630232 gttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 21630174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 247
Target Start/End: Original strand, 2869692 - 2869768
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 247  Q
    |||||||||| | |||||| ||||||| || || |||||||||||||| |||||||||| ||| |||| ||||||||    
T  2869692 ttcttgtaactcctttgtatcactttcatcttagtggattggagagctactctctcccctagagtaggtcatattgg 2869768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 67
Target Start/End: Complemental strand, 20522511 - 20522471
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaa 67  Q
    ||||||||||||||||| | |||| ||||||||||||||||    
T  20522511 gggttgagtgtctttgtagtgagtatctcttgggttgggaa 20522471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 23078278 - 23078339
Alignment:
Q  26 tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||||   |||  ||||||||||||||  ||||||||||| ||||||||||    
T  23078278 tgggttgagtgtctttgtgatgagaatctcttgggttggg--aaacattgtaaacaccttgggt 23078339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 89
Target Start/End: Original strand, 29867780 - 29867840
Alignment:
Q  26 tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||| ||||||| | ||||| |||||||||||||||||  |||||||| ||||||||||    
T  29867780 tgggttgagggtctttgattagagt-tctcttgggttgggaaa--cattgtaaacaccttgggt 29867840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 264
Target Start/End: Complemental strand, 35215646 - 35215586
Alignment:
Q  205 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaa 264  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||| ||||||    
T  35215646 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 35215586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 264
Target Start/End: Complemental strand, 35218023 - 35217963
Alignment:
Q  205 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaa 264  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||| ||||||    
T  35218023 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 35217963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 41586358 - 41586419
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaaca-ttgtaatcaccttgggt 89  Q
    |||||||||||||||| ||||||  |||||||||||||  |||||| |||||| ||||||||||    
T  41586358 gggttgagtgtctttggtgagagcttctcttgggttgg--aaaacagttgtaaacaccttgggt 41586419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 237; Significance: 1e-131; HSPs: 43)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 8 - 289
Target Start/End: Complemental strand, 41398498 - 41398216
Alignment:
Q  8 tagcaaaggagagaacca--tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttg 105  Q
    ||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  41398498 tagcaaaggagggaaccaaatgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtg 41398399  T
Q  106 tgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatatt 205  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41398398 tgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagag-tcttgtaaccttttgtaacactttctcatatt 41398300  T
Q  206 ggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttcctt 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||    
T  41398299 ggattggagagctgctctctcccccagattaggccatattggctgacctgggtcaacaatcttctcggtgttttgttcttcctt 41398216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 8 - 289
Target Start/End: Complemental strand, 41390843 - 41390561
Alignment:
Q  8 tagcaaaggagagaacca--tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttg 105  Q
    ||||||||||| ||||||  ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||    
T  41390843 tagcaaaggagggaaccaaatggattgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatagtg 41390744  T
Q  106 tgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatatt 205  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41390743 tgagagtgggaaaataccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagag-tcttgtaaccttttgtaacactttctcatatt 41390645  T
Q  206 ggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttcctt 289  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||    
T  41390644 ggattggagagctgctctctcccccagattaggccatattggctgatctgggtcaacaatcttctcgatgttttgttcttcctt 41390561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 25 - 307
Target Start/End: Original strand, 25444931 - 25445214
Alignment:
Q  25 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacacca 124  Q
    ||||| || ||| ||||| |||||| || |||| |||||||||||||||||||||||||||||| ||||||||||||  |||||||||||| ||| ||||    
T  25444931 atggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttgggatttagggttcatagtgtgagagtgggaaaatacca 25445030  T
Q  125 aagggtagaatctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctct 223  Q
    ||||||||  ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  25445031 aagggtagc-tctagggtttgttcatgtgtaaagcttgataagctagagt-cttgtaaccttttgtaacactttctcatattggattggagagctgctct 25445128  T
Q  224 ctcccccagattaggccatattggctgaactgggacaacaatctt-ctcggtgttttgttc-ttccttttatcgcttaccttgttt 307  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||| || ||| |||||||    
T  25445129 ctcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgttt 25445214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 25 - 307
Target Start/End: Complemental strand, 39445742 - 39445460
Alignment:
Q  25 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacacca 124  Q
    ||||| || ||| ||||| |||||| || |||| |||||||||||||||||||||||||||||| ||| ||||||||  |||||||||||| ||| ||||    
T  39445742 atggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaatacca 39445643  T
Q  125 aagggtagaatctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctct 223  Q
    ||||||||  ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||    
T  39445642 aagggtagt-tctagggtttgttcatgtgtaaagcttgataagctagagt-cttgtaaccttttgtaacactt-cacatattggattggagagctgctct 39445546  T
Q  224 ctcccccagattaggccatattggctgaactgggacaacaatctt-ctcggtgttttgttc-ttccttttatcgcttaccttgttt 307  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||| || ||| |||||||    
T  39445545 ctcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgttt 39445460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 89 - 320
Target Start/End: Original strand, 24787280 - 24787511
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagtt-cttgtaacctttt 187  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||  ||| ||||||||| |||    
T  24787280 ttttagggttcatattgtgagagttgggaaacaccaaagggtagaatctaggatttgttcttgtgtaatgcttgaaggctattgtttcttgtaacccttt 24787379  T
Q  188 gtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgttttgttcttcc 287  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||    
T  24787380 gtaacactttctcatattggattggagagctgctctcccccccagattaggccatattggctgaactgggtcaacaatcttcttggtgttttgttcttcc 24787479  T
Q  288 ttttatcgcttaccttgttttgctttggtatct 320  Q
    |||| | ||||| |||| ||||||||| |||||    
T  24787480 ttttcttgcttatcttg-tttgctttgttatct 24787511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 25 - 285
Target Start/End: Original strand, 44023716 - 44023975
Alignment:
Q  25 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacacca 124  Q
    ||||| || ||| ||||| |||||| || |||| |||||||||||||||||||||||||||||| ||| ||||||||  |||||||||||| ||| ||||    
T  44023716 atggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaatacca 44023815  T
Q  125 aagggtagaatctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctct 223  Q
    ||||||||  ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||    
T  44023816 aagggtagt-tctagggtttgttcatgtgtaaagcttgacaagctagagt-cttgtaaccttttgtaacactt-cacatattggattggagagctgctct 44023912  T
Q  224 ctcccccagattaggccatattggctgaactgggacaacaatctt-ctcggtgttttgttctt 285  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  44023913 ctcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctt 44023975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 25 - 307
Target Start/End: Original strand, 1054854 - 1055136
Alignment:
Q  25 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacacca 124  Q
    ||||| || ||| ||||| |||||| || |||| |||||||||||||||||||||||||||||| ||| ||||||||  |||||||||||| ||| ||||    
T  1054854 atggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaatacca 1054953  T
Q  125 aagggtagaatctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctct 223  Q
    ||||||||  ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| | ||||||||||||||||| ||||||    
T  1054954 aagggtagt-tctagggtttgttcatgtgtaaagcttgataagctagagt-cttgtaaccttttgtaacactt-cacatattggattggagagttgctct 1055050  T
Q  224 ctcccccagattaggccatattggctgaactgggacaacaatctt-ctcggtgttttgttc-ttccttttatcgcttaccttgttt 307  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||| || ||| |||||||    
T  1055051 ctcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgttt 1055136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 89 - 290
Target Start/End: Original strand, 24202686 - 24202888
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttg 188  Q
    ||||||||||||| |||||||||||||||||||| || ||||||||||||||  |||||| ||||||| ||||| | ||||   ||||||||||| ||||    
T  24202686 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttg 24202784  T
Q  189 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgt-tttgttcttc 286  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||||||||||    
T  24202785 taacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctttttggtgtgtttgttcttc 24202884  T
Q  287 cttt 290  Q
    ||||    
T  24202885 cttt 24202888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 38 - 285
Target Start/End: Original strand, 43988314 - 43988566
Alignment:
Q  38 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacaccaaagggtagaat 135  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||  ||||||||  ||||||  |||| |||  |||||||||||| |    
T  43988314 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggatgggaaaatgccaaagggtaga-t 43988412  T
Q  136 ctagggtttgtt--catgtgtaaagcttga-aggctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctccccca 231  Q
    ||||||||| ||  | |||||||||||||| | |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  43988413 ctagggttttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctccccca 43988511  T
Q  232 gattaggccatattggctgaactgggacaacaatctt-ctcggtgttttgttctt 285  Q
    |||||||||| |||||||||||||||  ||||||||| || ||||||||||||||    
T  43988512 gattaggccacattggctgaactgggtaaacaatcttgcttggtgttttgttctt 43988566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 89 - 304
Target Start/End: Original strand, 19358760 - 19358975
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttg 188  Q
    ||||||||||||| ||| |||||||||||||||| || ||||||||||||||  |||||| ||||||| ||||| | ||||   ||||||||||| ||||    
T  19358760 ttttagggttcatattgagagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttg 19358858  T
Q  189 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgt-tttgttcttc 286  Q
    |||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||||||| |||||||||| |||||||||| | | ||| ||||||||||    
T  19358859 taacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattgactgaactgggtcaacaatctt-ttgatgtgtttgttcttc 19358957  T
Q  287 cttttatcgcttaccttg 304  Q
    ||||| | ||||| ||||    
T  19358958 cttttcttgcttatcttg 19358975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 89 - 304
Target Start/End: Original strand, 19361349 - 19361564
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttg 188  Q
    ||||||||||||| ||| |||||||||||||||| || ||||||||||||||  |||||| ||||||| ||||| |  |||   ||||||||||| ||||    
T  19361349 ttttagggttcatattgagagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa-gcttgcaaactatttttcttgtaaccctttg 19361447  T
Q  189 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgt-tttgttcttc 286  Q
    |||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||||||| |||||||||| |||||||||| | ||||| ||||||||||    
T  19361448 taacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattgactgaactgggtcaacaatctt-ttggtgtgtttgttcttc 19361546  T
Q  287 cttttatcgcttaccttg 304  Q
    ||||| | ||||| ||||    
T  19361547 cttttcttgcttatcttg 19361564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 89 - 304
Target Start/End: Original strand, 19379989 - 19380204
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttg 188  Q
    ||||||||||||| ||| |||||||||||||||| || ||||||||||||||  |||||| ||||||| ||||| |  |||   ||||||||||| ||||    
T  19379989 ttttagggttcatattgagagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa-gcttgcaaactatttttcttgtaaccctttg 19380087  T
Q  189 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgt-tttgttcttc 286  Q
    |||||||||| ||||| ||||||||||||||||||||||||||| |||||| ||||||| |||||||||| |||||||||| | ||||| ||||||||||    
T  19380088 taacactttcatcatagtggattggagagctgctctctcccccatattaggtcatattgactgaactgggtcaacaatctt-ttggtgtgtttgttcttc 19380186  T
Q  287 cttttatcgcttaccttg 304  Q
    ||||| | ||||| ||||    
T  19380187 cttttcttgcttatcttg 19380204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 25 - 163
Target Start/End: Original strand, 25439738 - 25439875
Alignment:
Q  25 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacacca 124  Q
    ||||| || ||| ||||| |||||| || |||| |||||||||||||||||||||||||||||| ||||||||||||  |||||||||||| ||| ||||    
T  25439738 atggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttgggatttagggttcatagtgtgagagtgggaaaatacca 25439837  T
Q  125 aagggtagaatctagggtttgttcatgtgtaaagcttga 163  Q
    ||||||||  |||||||||||||||||||||||||||||    
T  25439838 aagggtag-ctctagggtttgttcatgtgtaaagcttga 25439875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 24202573 - 24202635
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24202573 gggttgagtgtctttgtagagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 24202635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 11 - 88
Target Start/End: Original strand, 24787148 - 24787226
Alignment:
Q  11 caaaggagagaaccat-gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttggg 88  Q
    |||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  24787148 caaaggagggaaccaaagggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattataatcaccttggg 24787226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 26644897 - 26644994
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||| ||||||||||    
T  26644897 ttcttgtaactctttgtaacactttcatcataatggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 26644994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 183 - 268
Target Start/End: Original strand, 47703946 - 47704033
Alignment:
Q  183 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||| ||||||||||    
T  47703946 cttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 47704033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 268
Target Start/End: Complemental strand, 19073026 - 19072928
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| |||||||||||||||| || || |||||||||||||||||||||||||||||||||| |||||||| | |||||||| ||||||||||    
T  19073026 ttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 19072928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 173 - 268
Target Start/End: Complemental strand, 19120916 - 19120818
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| |||||||||||||||| || || |||||||||||||||||||||||||||||||||| |||||||| | |||||||| ||||||||||    
T  19120916 ttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 19120818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 16124515 - 16124613
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| |||||||| | |||||| | ||||||||||    
T  16124515 ttcttgtaactcttttgtaacactttcatcatagtggattggagggctgctctctcccccagattaggtcatattggaccgaactgagtcaacaatctt 16124613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 27104371 - 27104469
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||  ||||||| | |||||| | ||||||||||    
T  27104371 ttcttgtaactcttttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggttatattggaccgaactgtgtcaacaatctt 27104469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 268
Target Start/End: Complemental strand, 3281805 - 3281708
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||||  |||||||||||||| ||||  |||||||||||||||||||||||||||||||||| |||||||| | |||||||| ||| ||||||    
T  3281805 ttcttgtaactctttgtaacactttcatcatcgtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaataatctt 3281708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 268
Target Start/End: Complemental strand, 9476348 - 9476261
Alignment:
Q  183 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||| |||||| ||||| ||||||||||||||||||||||||| |||||||| |||||||| | |||||||| ||||||||||    
T  9476348 cttttgtaatactttcatcatagtggattggagagctgctctctcccctagattaggtcatattggaccgaactgggtcaacaatctt 9476261  T

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Target: chr1; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 268
Target Start/End: Complemental strand, 13598485 - 13598398
Alignment:
Q  183 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||||||||| ||||| ||||||| || ||||||||||||||||||||||| |||||||| | |||||||| ||||||||||    
T  13598485 cttttgtaacactttcatcatagtggattgaagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 13598398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 268
Target Start/End: Complemental strand, 29651898 - 29651811
Alignment:
Q  183 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||| |||||||| | |||||||| ||| ||||||    
T  29651898 cttttgtaacactttcatcatagtggattggagtgctgctctctcccccagattaggtcatattggaccgaactgggtcaaaaatctt 29651811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 176 - 268
Target Start/End: Complemental strand, 37069864 - 37069770
Alignment:
Q  176 ttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||  |||||||||||||| ||||| ||||| |||||| ||||||||||||||||||||| |||||||| | |||||||| ||||||||||    
T  37069864 ttgtaactctttgtaacactttcatcatagtggatcggagagatgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 37069770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 183 - 268
Target Start/End: Complemental strand, 775759 - 775672
Alignment:
Q  183 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||||||||| || || |||||||||||||| ||||||||||||||||||| |||||||| | ||| |||| ||||||||||    
T  775759 cttttgtaacactttcatcttagtggattggagagctactctctcccccagattaggtcatattggaccgaattgggtcaacaatctt 775672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 13604623 - 13604697
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg 246  Q
    ||||||||||  ||||||||| |||| ||||| ||||||||||||||||||||||||||| |||||| |||||||    
T  13604623 ttcttgtaactctttgtaacattttcatcatagtggattggagagctgctctctcccccatattaggtcatattg 13604697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 238
Target Start/End: Original strand, 21536569 - 21536635
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattagg 238  Q
    ||||||||||  |||||||||||||| | ||| ||||||||||||||||||||||||||||||||||    
T  21536569 ttcttgtaactctttgtaacactttcattatagtggattggagagctgctctctcccccagattagg 21536635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 47098824 - 47098921
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||||   ||||||||||||| || || |||||||||| |||||||||||||||||||| || |||||||| | |||||||| ||||||||||    
T  47098824 ttcttgtaactcattgtaacactttcatcttagtggattggagggctgctctctcccccagattcggtcatattggaccgaactgggtcaacaatctt 47098921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 89 - 156
Target Start/End: Original strand, 19366225 - 19366292
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaa 156  Q
    ||||||||||||| ||| |||||||||||||||| || ||||||||||||||  |||||| |||||||    
T  19366225 ttttagggttcatattgagagagtggggaaacacaaatgggtagaatctaggtcttgttcttgtgtaa 19366292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 19366112 - 19366174
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| | |||  ||||||||||||||||||| ||||||| ||||||||||    
T  19366112 gggttgagtgtctttgtagtgaggatctcttgggttgggaaaaatattgtaaacaccttgggt 19366174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 247
Target Start/End: Complemental strand, 32889536 - 32889461
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg 247  Q
    ||||||||||   ||||||||||||| || || ||||||||||||||||||| ||||||||| |||| ||||||||    
T  32889536 ttcttgtaactcattgtaacactttcatcttagtggattggagagctgctctatcccccagactaggtcatattgg 32889461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 19361237 - 19361298
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| | |||  |||||||||||||| |||||||||||| ||||||||||    
T  19361237 gggttgagtgtctttgtagtgaggatctcttgggttggg-aaaacattgtaaacaccttgggt 19361298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 47098633 - 47098693
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  47098633 gggttgagtgtctttgtagcgaggttctcttgggttggg--aaacattgtaaacaccttgggt 47098693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 47102647 - 47102707
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  47102647 gggttgagtgtctttgtagtgaggttctcttgggttggg--aaacattgtaaacaccttgggt 47102707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 89
Target Start/End: Complemental strand, 3281995 - 3281936
Alignment:
Q  28 ggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    |||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  3281995 ggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 3281936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 19358648 - 19358709
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| | |||  ||| |||||||||| |||||||||||| ||||||||||    
T  19358648 gggttgagtgtctttgtagtgaggatcttttgggttggg-aaaacattgtaaacaccttgggt 19358709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 173 - 265
Target Start/End: Original strand, 47102841 - 47102935
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaat 265  Q
    ||||||||||   |||||||| |||| || || |||||||||  |||||||||||||| |||||||| |||||||| | |||||||| |||||||    
T  47102841 ttcttgtaactcattgtaacattttcatcttagtggattggatggctgctctctcccctagattaggtcatattggaccgaactgggtcaacaat 47102935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 264
Target Start/End: Complemental strand, 9459479 - 9459419
Alignment:
Q  205 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaa 264  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||| ||||||    
T  9459479 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 9459419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 264
Target Start/End: Complemental strand, 9463306 - 9463246
Alignment:
Q  205 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaa 264  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||| ||||||    
T  9463306 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 9463246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 264
Target Start/End: Original strand, 16226386 - 16226446
Alignment:
Q  205 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaa 264  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||| ||||||    
T  16226386 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 16226446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 28 - 87
Target Start/End: Complemental strand, 37070055 - 37069998
Alignment:
Q  28 ggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgg 87  Q
    |||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||    
T  37070055 ggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgg 37069998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 197; Significance: 1e-107; HSPs: 2)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 54 - 290
Target Start/End: Original strand, 9514 - 9748
Alignment:
Q  54 tcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtg 153  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||| ||||||||||||| |||||||||||||||||||    
T  9514 tcttaggttgggaaaaacattgtaatcaccttgggttttagggttcatagtgtgagagtgggaaaataccaaagggtaga-tctagggtttgttcatgtg 9612  T
Q  154 taaagcttgaaggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaac 253  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9613 taaagcttgaaggctagagt-cttgtaaccttttgtaacactttctcatattggattggagagctgctctctcccccagattaggccatattggctgaac 9711  T
Q  254 tgggacaacaatcttctcggtgttttgttcttccttt 290  Q
    |||| ||||||||||||||||||||||||||||||||    
T  9712 tgggtcaacaatcttctcggtgttttgttcttccttt 9748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 8 - 182
Target Start/End: Original strand, 3671 - 3845
Alignment:
Q  8 tagcaaaggagagaacca--tgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttg 105  Q
    ||||||||||| ||||||  |||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||  ||    
T  3671 tagcaaaggagggaaccaaatgggttgagtgtctttgttgagagtgtctcttaggttaggaaaaacattgtaatcaccttgggttttagggttcatagtg 3770  T
Q  106 tgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaac 182  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3771 tgagagtgggaaaataccaaagggtag-atctagggtttgttcatgtgtaaagcttgaaggctagag-tcttgtaac 3845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 158; Significance: 5e-84; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 25 - 307
Target Start/End: Complemental strand, 605 - 323
Alignment:
Q  25 atgggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacacca 124  Q
    ||||| || ||| ||||| |||||| || |||| |||||||||||||||||||||||||||||| ||| ||||||||  |||||||||||| ||| ||||    
T  605 atggggtgtgtgcctttgatgagagagtttcttaggttgggaaaaacattgtaatcaccttgggattttgggttcatagtgtgagagtgggaaaatacca 506  T
Q  125 aagggtagaatctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaaccttttgtaacactttctcatattggattggagagctgctct 223  Q
    ||||||||  ||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||    
T  505 aagggtagt-tctagggtttgttcatgtgtaaagcttgataagctagagt-cttgtaaccttttgtaacactt-cacatattggattggagagctgctct 409  T
Q  224 ctcccccagattaggccatattggctgaactgggacaacaatctt-ctcggtgttttgttc-ttccttttatcgcttaccttgttt 307  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| ||||||||| || ||| |||||||    
T  408 ctcccccagattaggccatattggctgaactgggtcaacaatcttgctcggtgttttgttctttccttttaccgtttatcttgttt 323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 109; Significance: 8e-55; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 38 - 305
Target Start/End: Original strand, 14161 - 14433
Alignment:
Q  38 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacaccaaagggtagaat 135  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||  ||||||||  ||||||  |||| ||  ||||||||||||  |    
T  14161 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggttgggaaattaccaaagggtagg-t 14259  T
Q  136 ctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 233  Q
    |||||||||  || |||||||||||||| | |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  14260 ctagggttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctgctctctcccccaga 14358  T
Q  234 ttaggccatattggctgaactgggacaacaatctt-ctcggtgttttgttc--ttccttttatcgcttaccttgt 305  Q
    |||||||| ||||||||||||||| |||||||||| || ||||||||||||  || ||||||||| ||| |||||    
T  14359 ttaggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttttcttttatcgtttatcttgt 14433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 38 - 278
Target Start/End: Original strand, 19017 - 19260
Alignment:
Q  38 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacaccaaagggtagaat 135  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||  ||  ||||||||  ||||||  |||| ||  ||||||||||||| |    
T  19017 ctttgatgagagtgtttcttaggttgggaaaacaacattgtaatcaccttggaattatgggttcatagtgtgaggttgggaaattaccaaagggtaga-t 19115  T
Q  136 ctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 233  Q
    |||||||||  || |||||||||||||| | |||||| |||||||||| ||||||||||||  || ||||||| ||||||||||||||||||||||||||    
T  19116 ctagggttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaacacactcacatattgtattggagagctgctctctcccccaga 19214  T
Q  234 ttaggccatattggctgaactgggacaacaatctt-ctcggtgttt 278  Q
    |||||||| | ||||||||||||| |||||||||| ||||||||||    
T  19215 ttaggccacaatggctgaactgggtcaacaatcttgctcggtgttt 19260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 108; Significance: 3e-54; HSPs: 4)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 89 - 290
Target Start/End: Original strand, 17869 - 18071
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttg 188  Q
    ||||||||||||| |||||||||||||||||||| || |||||||| ||| |  |||||| ||||||| ||||| | ||||   ||||||||||| ||||    
T  17869 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaaactatgacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttg 17967  T
Q  189 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgt-tttgttcttc 286  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||||||||||    
T  17968 taacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctttttggtgtgtttgttcttc 18067  T
Q  287 cttt 290  Q
    ||||    
T  18068 cttt 18071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 89 - 290
Target Start/End: Original strand, 23962 - 24164
Alignment:
Q  89 ttttagggttcatgttgtgagagtggggaaacaccaaagggtagaatctagggtttgttcatgtgtaaagcttgaaggctagagttcttgtaaccttttg 188  Q
    ||||||||||||| |||||||||||||||||||| || |||||||| ||| |  |||||| ||||||| ||||| | ||||   ||||||||||| ||||    
T  23962 ttttagggttcatattgtgagagtggggaaacacaaatgggtagaaactatgacttgttcttgtgtaa-gcttgcaagctatttttcttgtaaccctttg 24060  T
Q  189 taacactttc-tcatattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatcttctcggtgt-tttgttcttc 286  Q
    |||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| | ||||| ||||||||||    
T  24061 taacactttcatcatagtggattggagagctgctctctcccccagattaggccatattggctgaactgggtcaacaatctttttggtgtgtttgttcttc 24160  T
Q  287 cttt 290  Q
    ||||    
T  24161 cttt 24164  T

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Target: scaffold0188; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 17756 - 17818
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||    
T  17756 gggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaatcaccttgggt 17818  T

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Target: scaffold0188; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 23849 - 23911
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||||||||    
T  23849 gggttgagtgtctttgtagagaggatctcttgggttgggaaaaacattgtaatcaccttgggt 23911  T

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Target: scaffold0259 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 38 - 278
Target Start/End: Original strand, 2103 - 2346
Alignment:
Q  38 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacaccaaagggtagaat 135  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||  ||||||||  ||||||  |||| ||  ||||||||||||| |    
T  2103 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggttgggaaattaccaaagggtaga-t 2201  T
Q  136 ctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 233  Q
    ||| |||||  || |||||||||||||| | |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||| ||||||||||||||    
T  2202 ctatggttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctactctctcccccaga 2300  T
Q  234 ttaggccatattggctgaactgggacaacaatctt-ctcggtgttt 278  Q
    |||||||| ||||||||||||||| |||||||||| ||||||||||    
T  2301 ttaggccacattggctgaactgggtcaacaatcttgctcggtgttt 2346  T

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Target: scaffold0028 (Bit Score: 103; Significance: 3e-51; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 38 - 278
Target Start/End: Original strand, 148808 - 149051
Alignment:
Q  38 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacaccaaagggtagaat 135  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||  ||||||||  ||||||  |||| ||  ||||||||||||| |    
T  148808 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggttgggaaattaccaaagggtaga-t 148906  T
Q  136 ctagggtttgttcatgtgtaaagcttga-aggctagagttcttgtaac-cttttgtaacactttctcatattggattggagagctgctctctcccccaga 233  Q
    ||| |||||  || |||||||||||||| | |||||| |||||||||| |||||||||||| ||| ||||||||||||||||||| ||||||||||||||    
T  148907 ctatggttttgtcttgtgtaaagcttgataagctaga-ttcttgtaactcttttgtaacacattcacatattggattggagagctactctctcccccaga 149005  T
Q  234 ttaggccatattggctgaactgggacaacaatctt-ctcggtgttt 278  Q
    |||||||| ||||||||||||||| |||||||||| ||||||||||    
T  149006 ttaggccacattggctgaactgggtcaacaatcttgctcggtgttt 149051  T

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Target: scaffold0009 (Bit Score: 66; Significance: 4e-29; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 200 - 305
Target Start/End: Original strand, 181980 - 182088
Alignment:
Q  200 catattggattggagagctgctctctcccccagattaggccatattggctgaactgggacaacaatctt-ctcggtgttttgttc--ttccttttatcgc 296  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| || ||||||||||||  || |||||||||     
T  181980 catattggattggagagctgctctctcccccagattaggccacattggctgaactgggtcaacaatcttgcttggtgttttgttcgttttcttttatcgt 182079  T
Q  297 ttaccttgt 305  Q
    ||| |||||    
T  182080 ttatcttgt 182088  T

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Target: scaffold0009; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 38 - 132
Target Start/End: Original strand, 176829 - 176925
Alignment:
Q  38 ctttgttgagagtgtctcttgggttgggaaaa--acattgtaatcaccttgggttttagggttcatgttgtgagagtggggaaacaccaaagggtag 132  Q
    ||||| ||||||||| |||| |||||||||||  ||||||||||||||||||| ||  ||||||||  ||||||  |||| ||  ||||||||||||    
T  176829 ctttgatgagagtgtatcttaggttgggaaaacaacattgtaatcaccttgggattatgggttcatagtgtgaggttgggaaattaccaaagggtag 176925  T

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Target: scaffold0140 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 8419 - 8516
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||| | |||||||| ||||||||||    
T  8419 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 8516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 8225 - 8285
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| | |||  ||||||||||||||  ||||||||||| ||||||||||    
T  8225 gggttgagtgtctttgtagtgaggatctcttgggttggg--aaacattgtaaacaccttgggt 8285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 173 - 267
Target Start/End: Complemental strand, 85780 - 85684
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatct 267  Q
    ||||||||||  |||||||||||||| ||||  ||||||||||||| |||||||||||||||||||| |||||||| |||||||||| |||||||||    
T  85780 ttcttgtaactctttgtaacactttcatcatggtggattggagagccgctctctcccccagattaggtcatattggactgaactgggtcaacaatct 85684  T

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Target: scaffold0087 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 43961 - 44058
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||||  |||||||||||||| ||||| ||||||||||||||||||||||||||||| |||  |||||||| | |||||||| ||||||||||    
T  43961 ttcttgtaactctttgtaacactttcatcatagtggattggagagctgctctctcccccagaatagatcatattggaccgaactgggtcaacaatctt 44058  T

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Target: scaffold0087; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 173 - 268
Target Start/End: Original strand, 36832 - 36929
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    ||||||||||  |||||||||||||| ||||| ||| |||| |||||||||||| ||| |||||||| |||||||| | |||||||| ||||||||||    
T  36832 ttcttgtaactctttgtaacactttcatcatagtgggttggcgagctgctctcttccctagattaggtcatattggaccgaactgggtcaacaatctt 36929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 89
Target Start/End: Original strand, 36640 - 36700
Alignment:
Q  27 gggttgagtgtctttgttgagagtgtctcttgggttgggaaaaacattgtaatcaccttgggt 89  Q
    ||||||||||||||||| | |||  |||||||||||||  |||||||||||| ||||||||||    
T  36640 gggttgagtgtctttgtagtgaggatctcttgggttgg--aaaacattgtaaacaccttgggt 36700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 48; Significance: 2e-18; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 268
Target Start/End: Complemental strand, 5770 - 5683
Alignment:
Q  183 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||||||||| ||||| ||||||| || ||||||||||||||||||||||| |||||||| | |||||||| ||||||||||    
T  5770 cttttgtaacactttcatcatagtggattgaagggctgctctctcccccagattaggtcatattggaccgaactgggtcaacaatctt 5683  T

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Target: scaffold0006; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 183 - 268
Target Start/End: Complemental strand, 2579 - 2492
Alignment:
Q  183 cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||||||||| ||||| |||||||||| |||||| |||||||||||||||| ||||||||   |||||||| ||||||||||    
T  2579 cttttgtaacactttcatcatagtggattggagggctgctgtctcccccagattaggtcatattggagcgaactgggtcaacaatctt 2492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 173 - 246
Target Start/End: Original strand, 133280 - 133354
Alignment:
Q  173 ttcttgtaaccttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg 246  Q
    ||||||||||  ||||||||| |||| ||||| ||||||||||||||||||||||||||| |||||| |||||||    
T  133280 ttcttgtaactctttgtaacattttcatcatagtggattggagagctgctctctcccccatattaggtcatattg 133354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 47; Significance: 8e-18; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 173 - 268
Target Start/End: Complemental strand, 10827 - 10729
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaatctt 268  Q
    |||||||||| |||||||||||||||| || || ||||||||||||||||||||||||||| |||||| |||||||| | |||||||| ||| ||||||    
T  10827 ttcttgtaactcttttgtaacactttcatcttagtggattggagagctgctctctcccccaaattaggtcatattggaccgaactgggtcaataatctt 10729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0978 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0978
Description:

Target: scaffold0978; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 236 - 313
Target Start/End: Original strand, 300 - 376
Alignment:
Q  236 aggccatattggctgaactgggacaacaatcttctcggtgttttgttcttccttttatcgcttaccttgttttgcttt 313  Q
    ||||||||||||||||||| || |||||||||||| |||||||||||||| | ||| | ||||| |||||||||||||    
T  300 aggccatattggctgaactaggtcaacaatcttcttggtgttttgttctttc-tttctagcttatcttgttttgcttt 376  T

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Target: scaffold0098 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 186 - 246
Target Start/End: Complemental strand, 45337 - 45276
Alignment:
Q  186 ttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg 246  Q
    ||||||| ||||| ||||| |||||||||||||||||||||||||||||||||| |||||||    
T  45337 ttgtaacgctttcatcatagtggattggagagctgctctctcccccagattaggtcatattg 45276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 173 - 246
Target Start/End: Complemental strand, 17361 - 17286
Alignment:
Q  173 ttcttgtaac-cttttgtaacactttc-tcatattggattggagagctgctctctcccccagattaggccatattg 246  Q
    |||||||||| |||||||||||||||| ||||| |||||||||| | ||||||||  |||| |||||| |||||||    
T  17361 ttcttgtaactcttttgtaacactttcatcataatggattggagggttgctctctttcccatattaggtcatattg 17286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 238
Target Start/End: Complemental strand, 11533 - 11500
Alignment:
Q  205 tggattggagagctgctctctcccccagattagg 238  Q
    ||||||||||||||||||||||||||||| ||||    
T  11533 tggattggagagctgctctctcccccagactagg 11500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 205 - 264
Target Start/End: Original strand, 269 - 329
Alignment:
Q  205 tggattggagagctgctctctcccccagattaggccatattgg-ctgaactgggacaacaa 264  Q
    |||||||||| |||||||||||||||||| |||| || ||||| | |||||||| ||||||    
T  269 tggattggagggctgctctctcccccagactaggtcagattggaccgaactgggtcaacaa 329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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