View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF5213_low_4 (Length: 588)

Name: NF5213_low_4
Description: NF5213
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF5213_low_4
NF5213_low_4
[»] chr4 (48 HSPs)
chr4 (296-436)||(47866041-47866181)
chr4 (296-438)||(43020761-43020903)
chr4 (296-432)||(20459247-20459383)
chr4 (305-436)||(20745334-20745465)
chr4 (74-200)||(11677159-11677285)
chr4 (74-200)||(11685438-11685564)
chr4 (296-436)||(42804261-42804401)
chr4 (305-436)||(3043806-3043937)
chr4 (296-436)||(20956895-20957035)
chr4 (296-436)||(55190669-55190809)
chr4 (296-436)||(40780252-40780390)
chr4 (305-429)||(27841846-27841969)
chr4 (286-436)||(48361047-48361198)
chr4 (296-436)||(44111747-44111888)
chr4 (345-425)||(34226400-34226480)
chr4 (305-434)||(48195904-48196034)
chr4 (305-436)||(16412248-16412380)
chr4 (305-436)||(30191910-30192042)
chr4 (366-436)||(20114135-20114205)
chr4 (370-436)||(53225724-53225790)
chr4 (296-432)||(3162900-3163037)
chr4 (296-346)||(52535956-52536006)
chr4 (296-436)||(38687916-38688057)
chr4 (286-417)||(15170878-15171010)
chr4 (296-434)||(25477549-25477688)
chr4 (297-427)||(42670770-42670901)
chr4 (302-428)||(50121448-50121575)
chr4 (366-436)||(19150799-19150869)
chr4 (295-436)||(36132637-36132779)
chr4 (366-436)||(45828491-45828561)
chr4 (289-350)||(4386134-4386195)
chr4 (305-432)||(31227277-31227405)
chr4 (370-434)||(53621408-53621472)
chr4 (288-339)||(9894622-9894673)
chr4 (367-434)||(16412238-16412305)
chr4 (370-433)||(35328944-35329007)
chr4 (291-350)||(41116562-41116621)
chr4 (297-339)||(134592-134634)
chr4 (372-434)||(18135395-18135457)
chr4 (370-436)||(23125648-23125714)
chr4 (370-432)||(31854459-31854521)
chr4 (370-436)||(39877405-39877471)
chr4 (370-436)||(54611976-54612042)
chr4 (367-436)||(48361054-48361123)
chr4 (295-339)||(23226954-23226998)
chr4 (370-434)||(36099491-36099555)
chr4 (370-434)||(49122600-49122664)
chr4 (290-346)||(54612057-54612113)
[»] chr8 (39 HSPs)
chr8 (297-436)||(12958782-12958921)
chr8 (305-436)||(44796356-44796487)
chr8 (296-436)||(36366027-36366167)
chr8 (289-434)||(42786362-42786506)
chr8 (296-436)||(22429540-22429680)
chr8 (286-436)||(6899415-6899565)
chr8 (286-436)||(35011207-35011359)
chr8 (296-436)||(24177977-24178117)
chr8 (296-434)||(32575176-32575318)
chr8 (305-413)||(24915195-24915303)
chr8 (290-427)||(5031463-5031601)
chr8 (305-434)||(8803242-8803372)
chr8 (366-436)||(10396794-10396864)
chr8 (306-434)||(16448793-16448922)
chr8 (296-436)||(3236337-3236476)
chr8 (370-434)||(30924001-30924065)
chr8 (289-435)||(22781885-22782032)
chr8 (305-431)||(35149675-35149802)
chr8 (370-432)||(7693113-7693175)
chr8 (288-350)||(10184640-10184702)
chr8 (290-436)||(42122968-42123117)
chr8 (296-436)||(2339292-2339433)
chr8 (288-436)||(29563660-29563809)
chr8 (375-436)||(43932134-43932195)
chr8 (370-434)||(2229150-2229214)
chr8 (305-436)||(7693035-7693167)
chr8 (370-434)||(10839767-10839831)
chr8 (289-436)||(34745259-34745407)
chr8 (366-405)||(9503473-9503512)
chr8 (366-405)||(9503614-9503653)
chr8 (286-436)||(34028385-34028536)
chr8 (370-436)||(12270136-12270202)
chr8 (297-339)||(32597598-32597640)
chr8 (370-436)||(41915596-41915662)
chr8 (375-436)||(24822808-24822869)
chr8 (375-436)||(43292570-43292631)
chr8 (297-346)||(43295069-43295118)
chr8 (366-434)||(24618962-24619030)
chr8 (370-406)||(30857257-30857293)
[»] chr2 (51 HSPs)
chr2 (296-443)||(45034403-45034550)
chr2 (296-436)||(45571035-45571175)
chr2 (296-436)||(45574702-45574842)
chr2 (296-436)||(45578369-45578509)
chr2 (296-436)||(45582036-45582176)
chr2 (296-436)||(45585703-45585843)
chr2 (296-436)||(45589370-45589510)
chr2 (296-436)||(45593037-45593177)
chr2 (296-436)||(45596704-45596844)
chr2 (296-436)||(45600371-45600511)
chr2 (296-436)||(45604038-45604178)
chr2 (296-436)||(45607705-45607845)
chr2 (296-436)||(45611372-45611512)
chr2 (296-436)||(45615039-45615179)
chr2 (305-436)||(4044577-4044708)
chr2 (305-436)||(4063286-4063417)
chr2 (306-432)||(15384442-15384568)
chr2 (305-434)||(3838422-3838551)
chr2 (296-436)||(9152381-9152522)
chr2 (289-436)||(20555256-20555403)
chr2 (290-436)||(12962704-12962851)
chr2 (305-434)||(11030196-11030326)
chr2 (305-436)||(38983001-38983133)
chr2 (295-429)||(38554467-38554602)
chr2 (296-436)||(30761383-30761524)
chr2 (296-420)||(41153129-41153254)
chr2 (306-429)||(32457222-32457346)
chr2 (358-436)||(12486059-12486138)
chr2 (286-339)||(5109358-5109411)
chr2 (289-436)||(41260027-41260175)
chr2 (296-436)||(43713976-43714116)
chr2 (296-434)||(6761469-6761608)
chr2 (296-434)||(25891949-25892088)
chr2 (299-433)||(40430674-40430809)
chr2 (305-405)||(28248966-28249067)
chr2 (370-434)||(16241347-16241411)
chr2 (370-434)||(44737362-44737426)
chr2 (370-433)||(5109368-5109431)
chr2 (306-345)||(13021716-13021755)
chr2 (373-436)||(25795321-25795384)
chr2 (286-436)||(29866084-29866235)
chr2 (297-335)||(5281281-5281319)
chr2 (375-436)||(7943524-7943586)
chr2 (370-436)||(27596729-27596795)
chr2 (370-436)||(42263550-42263616)
chr2 (379-420)||(26194307-26194348)
chr2 (301-350)||(33824360-33824409)
chr2 (370-430)||(3037805-3037865)
chr2 (296-434)||(7943443-7943583)
chr2 (370-434)||(18452573-18452637)
chr2 (305-404)||(35728499-35728599)
[»] chr7 (38 HSPs)
chr7 (296-436)||(27231836-27231976)
chr7 (305-436)||(4826776-4826907)
chr7 (296-434)||(1366599-1366737)
chr7 (296-436)||(32811380-32811520)
chr7 (296-427)||(31227498-31227629)
chr7 (287-436)||(28020003-28020151)
chr7 (315-425)||(42456993-42457103)
chr7 (296-436)||(28677319-28677460)
chr7 (305-436)||(36245378-36245510)
chr7 (327-410)||(49069080-49069163)
chr7 (305-436)||(11668017-11668149)
chr7 (302-432)||(41850607-41850738)
chr7 (305-420)||(8566099-8566215)
chr7 (296-433)||(2523775-2523913)
chr7 (302-422)||(16861523-16861642)
chr7 (375-430)||(16861520-16861575)
chr7 (307-433)||(45441441-45441568)
chr7 (308-434)||(45533247-45533374)
chr7 (296-350)||(13807247-13807301)
chr7 (370-428)||(29365701-29365759)
chr7 (305-402)||(30869222-30869320)
chr7 (296-436)||(10007576-10007719)
chr7 (366-417)||(40142794-40142845)
chr7 (373-436)||(41088854-41088917)
chr7 (375-436)||(24163270-24163332)
chr7 (370-416)||(28936076-28936122)
chr7 (370-436)||(35427739-35427805)
chr7 (371-436)||(2523851-2523916)
chr7 (375-436)||(10007661-10007722)
chr7 (296-436)||(10462382-10462522)
chr7 (373-414)||(29559520-29559561)
chr7 (375-420)||(33901056-33901101)
chr7 (302-339)||(48082810-48082847)
chr7 (370-434)||(5909551-5909615)
chr7 (308-380)||(8169151-8169223)
chr7 (370-434)||(23248748-23248812)
chr7 (369-405)||(35274442-35274478)
chr7 (366-406)||(48634205-48634245)
[»] chr5 (33 HSPs)
chr5 (296-436)||(22731261-22731401)
chr5 (296-436)||(29031039-29031179)
chr5 (296-436)||(15968316-15968456)
chr5 (305-436)||(1015158-1015289)
chr5 (296-433)||(27488352-27488489)
chr5 (296-433)||(1138223-1138360)
chr5 (287-436)||(26327531-26327681)
chr5 (305-436)||(13789734-13789866)
chr5 (296-436)||(38394433-38394574)
chr5 (291-436)||(5002142-5002288)
chr5 (326-436)||(33478142-33478253)
chr5 (287-436)||(6338311-6338461)
chr5 (370-436)||(31803038-31803104)
chr5 (370-436)||(38394430-38394496)
chr5 (355-420)||(11142428-11142493)
chr5 (305-429)||(18473489-18473614)
chr5 (371-436)||(36417128-36417193)
chr5 (289-436)||(7945839-7945987)
chr5 (305-436)||(18353222-18353354)
chr5 (370-434)||(25027698-25027762)
chr5 (370-436)||(904046-904112)
chr5 (327-432)||(919648-919754)
chr5 (305-434)||(15569345-15569475)
chr5 (304-350)||(36434767-36434813)
chr5 (370-432)||(37699860-37699922)
chr5 (305-434)||(41989568-41989698)
chr5 (366-410)||(892575-892619)
chr5 (372-436)||(7053650-7053714)
chr5 (372-424)||(12676123-12676175)
chr5 (370-434)||(13144884-13144948)
chr5 (315-382)||(14723410-14723478)
chr5 (369-405)||(22398120-22398156)
chr5 (370-434)||(29374174-29374238)
[»] chr1 (44 HSPs)
chr1 (296-436)||(34662687-34662827)
chr1 (296-436)||(43929348-43929488)
chr1 (296-436)||(47678258-47678398)
chr1 (296-436)||(47844539-47844679)
chr1 (305-434)||(49944847-49944977)
chr1 (296-433)||(26070829-26070967)
chr1 (287-436)||(26924209-26924359)
chr1 (297-436)||(519835-519975)
chr1 (290-436)||(38040278-38040425)
chr1 (289-434)||(44939070-44939216)
chr1 (296-435)||(34332481-34332621)
chr1 (305-427)||(38737942-38738065)
chr1 (305-434)||(38590070-38590202)
chr1 (290-425)||(26545010-26545146)
chr1 (302-350)||(45848950-45848998)
chr1 (366-436)||(26760175-26760245)
chr1 (288-403)||(50155333-50155449)
chr1 (296-434)||(9301924-9302063)
chr1 (302-347)||(6793605-6793650)
chr1 (375-436)||(51590432-51590493)
chr1 (370-434)||(14281594-14281658)
chr1 (290-433)||(29256606-29256747)
chr1 (367-427)||(34146881-34146941)
chr1 (370-434)||(38830487-38830551)
chr1 (366-434)||(50155374-50155442)
chr1 (369-436)||(47911924-47911991)
chr1 (367-434)||(49184243-49184310)
chr1 (372-434)||(9548676-9548738)
chr1 (372-434)||(10065337-10065399)
chr1 (366-408)||(10506290-10506332)
chr1 (308-441)||(18744576-18744706)
chr1 (305-430)||(23923564-23923690)
chr1 (370-432)||(28359151-28359213)
chr1 (370-436)||(28989274-28989340)
chr1 (289-338)||(640520-640569)
chr1 (297-350)||(26823143-26823196)
chr1 (367-432)||(28358999-28359064)
chr1 (369-405)||(457602-457638)
chr1 (296-430)||(11386159-11386294)
chr1 (370-434)||(23398084-23398148)
chr1 (370-434)||(29256678-29256742)
chr1 (305-345)||(29853253-29853293)
chr1 (369-405)||(30412671-30412707)
chr1 (297-345)||(39498770-39498818)
[»] chr3 (37 HSPs)
chr3 (305-434)||(29457844-29457973)
chr3 (296-433)||(33371866-33372003)
chr3 (296-436)||(49885384-49885524)
chr3 (315-429)||(54087407-54087521)
chr3 (296-387)||(5177817-5177908)
chr3 (296-436)||(53441909-53442050)
chr3 (296-436)||(28406469-28406610)
chr3 (307-436)||(12064911-12065041)
chr3 (287-436)||(21662882-21663032)
chr3 (299-436)||(54537451-54537589)
chr3 (324-436)||(48593175-48593288)
chr3 (300-433)||(335384-335518)
chr3 (370-436)||(19202330-19202396)
chr3 (296-436)||(51516963-51517103)
chr3 (364-436)||(8266305-8266377)
chr3 (373-436)||(42225645-42225708)
chr3 (296-436)||(21662888-21663029)
chr3 (370-434)||(6086981-6087045)
chr3 (370-434)||(8243762-8243826)
chr3 (370-434)||(9440208-9440272)
chr3 (370-434)||(10049672-10049736)
chr3 (287-339)||(40460341-40460393)
chr3 (289-428)||(45010760-45010900)
chr3 (290-436)||(25113348-25113495)
chr3 (370-436)||(14768100-14768166)
chr3 (370-432)||(18765338-18765400)
chr3 (370-436)||(28945658-28945724)
chr3 (370-436)||(49122946-49123012)
chr3 (370-436)||(53441987-53442053)
chr3 (300-436)||(43448967-43449104)
chr3 (289-405)||(44518034-44518151)
chr3 (373-414)||(48643687-48643728)
chr3 (375-436)||(53703732-53703793)
chr3 (366-414)||(19649603-19649651)
chr3 (370-434)||(26999025-26999089)
chr3 (376-436)||(28406553-28406613)
chr3 (372-436)||(40214982-40215046)
[»] chr6 (19 HSPs)
chr6 (287-433)||(8646684-8646830)
chr6 (305-436)||(2810093-2810224)
chr6 (296-420)||(1836978-1837102)
chr6 (363-436)||(2943315-2943388)
chr6 (305-428)||(28630767-28630891)
chr6 (305-436)||(3064897-3065029)
chr6 (296-430)||(30627828-30627963)
chr6 (286-436)||(24949626-24949777)
chr6 (305-405)||(1158278-1158379)
chr6 (296-436)||(33859492-33859633)
chr6 (289-436)||(390803-390951)
chr6 (305-432)||(17265727-17265855)
chr6 (366-410)||(20703476-20703520)
chr6 (370-432)||(14931264-14931326)
chr6 (366-436)||(27909051-27909121)
chr6 (297-350)||(13417421-13417474)
chr6 (286-350)||(7649794-7649858)
chr6 (370-434)||(22898857-22898921)
chr6 (370-430)||(34639120-34639180)
[»] scaffold0242 (1 HSPs)
scaffold0242 (305-436)||(16521-16653)
[»] scaffold0024 (1 HSPs)
scaffold0024 (364-432)||(7198-7266)
[»] scaffold0110 (1 HSPs)
scaffold0110 (286-434)||(1537-1685)
[»] scaffold0136 (1 HSPs)
scaffold0136 (303-430)||(16541-16669)
[»] scaffold0123 (1 HSPs)
scaffold0123 (296-436)||(29246-29387)
[»] scaffold0767 (1 HSPs)
scaffold0767 (378-436)||(3811-3869)
[»] scaffold0002 (2 HSPs)
scaffold0002 (366-417)||(423324-423375)
scaffold0002 (370-436)||(492385-492451)
[»] scaffold0023 (1 HSPs)
scaffold0023 (375-436)||(112908-112969)


Alignment Details
Target: chr4 (Bit Score: 109; Significance: 1e-54; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 296 - 436
Target Start/End: Original strand, 47866041 - 47866181
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| || ||||||||||||||||||||||||||| ||||||| |||||||||| || |||||||||||||||||||||||||| ||||||||||||||    
T  47866041 ctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 47866140  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  47866141 tcaaaaaagtaaattgtttcttatatataggaccggaggga 47866181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 296 - 438
Target Start/End: Original strand, 43020761 - 43020903
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| || ||||||||||||||||||||||||||| ||||||| |||||||||| || ||| |||||||||||||||||||||| ||||||||||||||    
T  43020761 ctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacctaacctagaaatagaccaaatacatcaactattcaatgaa 43020860  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggagggact 438  Q
    ||||||||||||||||||| |||||||||||||||||||||||    
T  43020861 tcaaaaaagtaaattgtttcttatatataggaccggagggact 43020903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 296 - 432
Target Start/End: Complemental strand, 20459383 - 20459247
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| || ||||||||||||||||||||||||||| ||||||| |||||||||| || |||||||||||||||||||||||||| ||||||||||||||    
T  20459383 ctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 20459284  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccgga 432  Q
    ||||||||||||||||||| |||||||||||||||||    
T  20459283 tcaaaaaagtaaattgtttcttatatataggaccgga 20459247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 305 - 436
Target Start/End: Complemental strand, 20745465 - 20745334
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaatcaaaaaag 404  Q
    |||||||||||||||||||| |||||| ||||||| |||||||||| || |||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  20745465 tatttataagaaaaagttaattttttagattcattcaataattgatgtacctagcctagaaatagatcaaatacatcaactattcaatgaatcaaaaaag 20745366  T
Q  405 taaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||||||||||||||||||||    
T  20745365 taaattgttttttatatataggaccggaggga 20745334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 74 - 200
Target Start/End: Complemental strand, 11677285 - 11677159
Alignment:
Q  74 tttaaaagttgattctaacaatctaccatttaaaacaaataactacgtaacaacatacaagtatcagagaagaataaagaagctaggtggattgagtgaa 173  Q
    |||||||||||||||||||||||||  |||||||| |||||||||||||| ||||| ||| ||||||||||||||||||||||||||| |||||||||||    
T  11677285 tttaaaagttgattctaacaatctatgatttaaaagaaataactacgtaagaacatgcaattatcagagaagaataaagaagctaggtagattgagtgaa 11677186  T
Q  174 taagtaaacacttaaagatttgaaact 200  Q
    |||||||||||||||||||||||||||    
T  11677185 taagtaaacacttaaagatttgaaact 11677159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 74 - 200
Target Start/End: Complemental strand, 11685564 - 11685438
Alignment:
Q  74 tttaaaagttgattctaacaatctaccatttaaaacaaataactacgtaacaacatacaagtatcagagaagaataaagaagctaggtggattgagtgaa 173  Q
    |||||||||||||||||||||||||  |||||||| |||||||||||||| ||||| ||| ||||||||||||||||||||||||||| |||||||||||    
T  11685564 tttaaaagttgattctaacaatctatgatttaaaagaaataactacgtaagaacatgcaattatcagagaagaataaagaagctaggtagattgagtgaa 11685465  T
Q  174 taagtaaacacttaaagatttgaaact 200  Q
    |||||||||||||||||||||||||||    
T  11685464 taagtaaacacttaaagatttgaaact 11685438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 296 - 436
Target Start/End: Original strand, 42804261 - 42804401
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| || ||||||||||||||||||||||||||| ||||||| |||||||||| || |||   |||||||||||||||||||| ||||||| ||||||    
T  42804261 ctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacctaatttagaaatagaccaaatacatcaactatttaatgaa 42804360  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  42804361 tcaaaaaaataaattgtttcttatatataggaccggaggga 42804401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 305 - 436
Target Start/End: Original strand, 3043806 - 3043937
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaatcaaaaaag 404  Q
    |||||||||||||||||||| |||||| ||||||| |||||||||| || |||| ||| ||||||||||||||||| ||||||||||||||||||||||     
T  3043806 tatttataagaaaaagttaattttttagattcattcaataattgatgtacctagtctaaaaatagaccaaatacatcaactattcaatgaatcaaaaaaa 3043905  T
Q  405 taaattgttttttatatataggaccggaggga 436  Q
    |||||||||| |||||||||| ||||||||||    
T  3043906 taaattgtttcttatatatagaaccggaggga 3043937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 296 - 436
Target Start/End: Original strand, 20956895 - 20957035
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| || ||||||||| |||| ||||| |||||| ||||||| |||||||||| || |||||||||||||||||||||||||| ||||||| ||||||    
T  20956895 ctccggtcctatttataaaaaaatgttaattttttagattcattcaataattgatgtagctagcctagaaatagaccaaatacatcaactattgaatgaa 20956994  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    |||||||| |||||||||| |||||||||| ||||||||||    
T  20956995 tcaaaaaaataaattgtttcttatatatagaaccggaggga 20957035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 296 - 436
Target Start/End: Complemental strand, 55190809 - 55190669
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| || ||||||||||||||| || | |||||||||||||| |||||||||| || |||||||||||||||||||||||||| || ||| || ||||    
T  55190809 ctccggtcctatttataagaaaaaattgattttttatattcattcaataattgatgtatctagcctagaaatagaccaaatacatcaattatccactgaa 55190710  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  55190709 tcaaaaaagtaaattgtttcttatatataggaccagaggga 55190669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 296 - 436
Target Start/End: Complemental strand, 40780390 - 40780252
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    |||||||| ||||||||||||||  ||||||||||| ||| ||| |||||||||| || ||||  || |||||||  |||||||| ||||||| ||||||    
T  40780390 ctccgatcctatttataagaaaa--ttaactttttaaattaattcaataattgatgtatctagtttaaaaatagattaaatacatcaactattgaatgaa 40780293  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  40780292 tcaaaaaagtaaattgtttcttatatataggaccggaggga 40780252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 305 - 429
Target Start/End: Original strand, 27841846 - 27841969
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaatcaaaaaag 404  Q
    ||||||||| |||||||||| |||||| ||||||| ||||||| || || |||||||||||||||| ||||||||| ||||||||||||||  ||||||     
T  27841846 tatttataa-aaaaagttaattttttagattcattcaataattaatgtacctagcctagaaatagatcaaatacatcaactattcaatgaacaaaaaaaa 27841944  T
Q  405 taaattgttttttatatataggacc 429  Q
    |||||||||| ||||||||| ||||    
T  27841945 taaattgtttcttatatataagacc 27841969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 286 - 436
Target Start/End: Original strand, 48361047 - 48361198
Alignment:
Q  286 ataatactttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaac 384  Q
    ||||||||  ||||| || ||||||||||||||| || |||||||| ||||||| | |||||||| ||  | | |||||| ||||||||||||||| |      
T  48361047 ataatactccctccggtcctatttataagaaaaatttgactttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcatt 48361146  T
Q  385 tattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||| ||||||||||||||||| || ||||| ||||| ||||||| |||||||    
T  48361147 tatgcaatgaatcaaaaaagtcaaatgtttcttataaataggacaggaggga 48361198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 296 - 436
Target Start/End: Complemental strand, 44111888 - 44111747
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatga 394  Q
    ||||| ||||||||||||||||||||| |||||||| ||||||| | |||||||| || ||    ||||| ||||||||||||||| |  |||  ||| |    
T  44111888 ctccggtcttatttataagaaaaagttgactttttagattcattgagtaattgatgtatcttctttagaatatagaccaaatacatcatttatgtaatta 44111789  T
Q  395 atcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||| || ||||| ||||| |||||||||||||||    
T  44111788 atcaaaaaagtcaaatgtttcttataaataggaccggaggga 44111747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 345 - 425
Target Start/End: Complemental strand, 34226480 - 34226400
Alignment:
Q  345 attgatttaactagcctagaaatagaccaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatatag 425  Q
    ||||||||| |||  ||| ||||||||||||||||| || |||||||||||||||||||||||||||||| ||||| ||||    
T  34226480 attgatttatctaatctaaaaatagaccaaatacatcaattattcaatgaatcaaaaaagtaaattgtttattataaatag 34226400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 305 - 434
Target Start/End: Original strand, 48195904 - 48196034
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaaaa 403  Q
    |||||||||||||||  |||||||||| ||||||| | |||||||  || || | |||||| ||||||||||||||| |  ||| ||||||| |||||||    
T  48195904 tatttataagaaaaaactaactttttaaattcattgagtaattgacgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaaccaaaaaa 48196003  T
Q  404 gtaaattgttttttatatataggaccggagg 434  Q
    || || ||||| ||||| |||||||||||||    
T  48196004 gtcaaatgtttcttataaataggaccggagg 48196034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 305 - 436
Target Start/End: Original strand, 16412248 - 16412380
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaaaa 403  Q
    ||||||||||||||| || |||||||| ||||||| |||||||||| ||  | | |||||| |||||||||||||||||  ||| |||||  ||||| ||    
T  16412248 tatttataagaaaaaattgactttttagattcattgaataattgatatatttggtctagaatatagaccaaatacattatttatgcaatgtgtcaaagaa 16412347  T
Q  404 gtaaattgttttttatatataggaccggaggga 436  Q
    || || | ||| |||||||||| ||||||||||    
T  16412348 gtcaaatatttcttatatatagaaccggaggga 16412380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 305 - 436
Target Start/End: Original strand, 30191910 - 30192042
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaaaa 403  Q
    ||||||||||||||| || | |||||| ||||||| | |||||||| ||  | | |||||| ||||||||||||||| |  ||| |||||||||||||||    
T  30191910 tatttataagaaaaaattgattttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaaaaa 30192009  T
Q  404 gtaaattgttttttatatataggaccggaggga 436  Q
    || || ||||| ||||| ||| |||||||||||    
T  30192010 gttaaatgtttcttataaatacgaccggaggga 30192042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 366 - 436
Target Start/End: Original strand, 20114135 - 20114205
Alignment:
Q  366 atagaccaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    |||||||| ||||||||  |||||||| |||| |||||||||||||||||||||| ||||||| |||||||    
T  20114135 atagaccatatacattagttattcaattaatctaaaaagtaaattgttttttataaataggactggaggga 20114205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 370 - 436
Target Start/End: Original strand, 53225724 - 53225790
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    |||||||||||||| ||||||||||||| ||||||| |||| ||| ||||| |||||||||||||||    
T  53225724 accaaatacattaattattcaatgaatctaaaaagtcaattttttcttataaataggaccggaggga 53225790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 296 - 432
Target Start/End: Original strand, 3162900 - 3163037
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatga 394  Q
    ||||| |||||||||||||||||| || |||||||| |||||||   ||||| || || || | |||||| ||||||  ||||||| |  ||| ||||||    
T  3162900 ctccggtcttatttataagaaaaaattgactttttaaattcattgtgtaattaatatatcttgtctagaatatagactcaatacatcatttatgcaatga 3162999  T
Q  395 atcaaaaaagtaaattgttttttatatataggaccgga 432  Q
    ||||||||||| || ||||||||||| ||| |||||||    
T  3163000 atcaaaaaagtcaaatgttttttataaataagaccgga 3163037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 296 - 346
Target Start/End: Original strand, 52535956 - 52536006
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataat 346  Q
    |||||||||||||||||||||||||||||||||||| || |||| ||||||    
T  52535956 ctccgatcttatttataagaaaaagttaactttttagatacattgaataat 52536006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 296 - 436
Target Start/End: Original strand, 38687916 - 38688057
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaa-tagaccaaatacattaactattcaatga 394  Q
    ||||| ||||||||| |||| |||||| |||||||| || |||| ||||||  |  || |||| | ||||  || ||||||||||| || |||| ||||     
T  38687916 ctccggtcttatttacaagagaaagttgactttttagatacattgaataatgtacgtatctagtcaagaacctaaaccaaatacataaattatttaatgt 38688015  T
Q  395 atcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||| |||||||||||||||| || || |||||||||||||||    
T  38688016 atctaaaaagtaaattgtttcttgtaaataggaccggaggga 38688057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 286 - 417
Target Start/End: Original strand, 15170878 - 15171010
Alignment:
Q  286 ataatactttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaac 384  Q
    ||||||||  ||||| ||||||||| |||| ||| || |||||||| || |||| ||||||  || ||||||  | |||| ||| | ||||||||| ||     
T  15170878 ataatactccctccggtcttatttacaagagaaaattgactttttaaatacattgaataatatatgtaactaatcaagaacataaatcaaatacataaat 15170977  T
Q  385 tattcaatgaatcaaaaaagtaaattgtttttt 417  Q
    ||||||||| ||| |||||||||||||||||||    
T  15170978 tattcaatgtatctaaaaagtaaattgtttttt 15171010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 296 - 434
Target Start/End: Complemental strand, 25477688 - 25477549
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatga 394  Q
    |||||| | ||||||||||||||  || |||||||| ||||||| | |||||||| ||  | |  ||||| ||||| ||||||||| |  ||| ||||||    
T  25477688 ctccgaccatatttataagaaaattttgactttttaaattcattgagtaattgatgtattttgtgtagaatatagatcaaatacatcatttatgcaatga 25477589  T
Q  395 atcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||||||||||| || | ||||||||| ||||||| |||||    
T  25477588 atcaaaaaagtcaaatattttttataaataggactggagg 25477549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 297 - 427
Target Start/End: Original strand, 42670770 - 42670901
Alignment:
Q  297 tccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaa 395  Q
    ||||||| ||||||||||||||||||||||||||  |||||||   ||||| || || || |  ||||| |||||||||||| || |  ||| |||||||    
T  42670770 tccgatcctatttataagaaaaagttaacttttttgattcattgtgtaattaatgtatctcgtttagaatatagaccaaatatatcatttatgcaatgaa 42670869  T
Q  396 tcaaaaaagtaaattgttttttatatatagga 427  Q
    || ||||||| || ||||| ||||| ||||||    
T  42670870 tctaaaaagtcaaatgtttcttataaatagga 42670901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 302 - 428
Target Start/End: Original strand, 50121448 - 50121575
Alignment:
Q  302 tcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctag-aaatagaccaaatacattaactattcaatgaatcaaa 400  Q
    |||||||||||||||||| || |||||||| ||| ||| ||| |||||| || || | |||| | |||||||||||| || |  ||| |||||||| |||    
T  50121448 tcttatttataagaaaaatttgactttttagatttattgaatgattgatgtatcttgtctagtatatagaccaaatatatcatttatgcaatgaattaaa 50121547  T
Q  401 aaagtaaattgttttttatatataggac 428  Q
    ||||| || ||||| ||||| |||||||    
T  50121548 aaagtcaaatgtttcttataaataggac 50121575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 436
Target Start/End: Original strand, 19150799 - 19150869
Alignment:
Q  366 atagaccaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||| |  ||| ||||||||| |||||||||| ||||| ||||| |||||||| ||||||    
T  19150799 atagaccaaatacatcatttatgcaatgaatcgaaaaagtaaaatgtttcttataaataggaccagaggga 19150869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 295 - 436
Target Start/End: Complemental strand, 36132779 - 36132637
Alignment:
Q  295 tctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatg 393  Q
    |||||| |||||||||||||||||| || |||||| | || |||| | || ||||| || || | || ||| |||||| |||||||| |  ||| |||||    
T  36132779 tctccggtcttatttataagaaaaaattgacttttaagatacattgagtagttgatgtatcttgtcttgaatatagactaaatacatcatttatacaatg 36132680  T
Q  394 aatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    |||||||||||| || | ||| ||||| ||||||| |||||||    
T  36132679 aatcaaaaaagtcaaatatttcttataaataggactggaggga 36132637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 366 - 436
Target Start/End: Original strand, 45828491 - 45828561
Alignment:
Q  366 atagaccaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    |||||||||||||||||| || |||||||||| ||||| | |||| ||| ||||| ||||||||| |||||    
T  45828491 atagaccaaatacattaattactcaatgaatctaaaaaatcaattttttcttataaataggaccgaaggga 45828561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 289 - 350
Target Start/End: Original strand, 4386134 - 4386195
Alignment:
Q  289 atactttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgat 350  Q
    ||||| ||||| ||||||||||||||||||| || |||||||| ||||||| | ||||||||    
T  4386134 atactctctccaatcttatttataagaaaaatttgactttttaaattcattaagtaattgat 4386195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 432
Target Start/End: Complemental strand, 31227405 - 31227277
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaa-tagaccaaatacattaactattcaatgaatcaaaaaa 403  Q
    |||||| |||| |||||| |||||||| || |||| ||||||  || || |||| | ||||  || ||||||||||| || |||| |||| ||| |||||    
T  31227405 tatttacaagagaaagttgactttttagatacattaaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 31227306  T
Q  404 gtaaattgttttttatatataggaccgga 432  Q
    ||||||||||| || || |||||||||||    
T  31227305 gtaaattgtttcttgtaaataggaccgga 31227277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 434
Target Start/End: Original strand, 53621408 - 53621472
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||||||||||| || ||||||||| ||| |||||||||||||| | || || |||||||||||||    
T  53621408 accaaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagg 53621472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 288 - 339
Target Start/End: Original strand, 9894622 - 9894673
Alignment:
Q  288 aatactttctccgatcttatttataagaaaaagttaactttttatattcatt 339  Q
    |||||| |||||| || |||||||||||||||||| |||||||| |||||||    
T  9894622 aatactatctccggtcctatttataagaaaaagttgactttttagattcatt 9894673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 434
Target Start/End: Complemental strand, 16412305 - 16412238
Alignment:
Q  367 tagaccaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||||||||||| || || ||||||||||||| ||||||| |||| ||| ||||| |||| ||||||||    
T  16412305 tagaccaaatatatcaattattcaatgaatctaaaaagtcaattttttcttataaatagaaccggagg 16412238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 433
Target Start/End: Complemental strand, 35329007 - 35328944
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggag 433  Q
    ||||||||||| || |||| |||| ||| |||||||||||| |||||| || ||||||||||||    
T  35329007 accaaatacataaattatttaatgtatctaaaaagtaaattattttttgtaaataggaccggag 35328944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 291 - 350
Target Start/End: Original strand, 41116562 - 41116621
Alignment:
Q  291 actttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgat 350  Q
    |||| ||||| || ||||||||||||||| ||||||||||| ||||||| | ||||||||    
T  41116562 acttcctccggtcctatttataagaaaaatttaactttttagattcattgagtaattgat 41116621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 339
Target Start/End: Complemental strand, 134634 - 134592
Alignment:
Q  297 tccgatcttatttataagaaaaagttaactttttatattcatt 339  Q
    |||||||||| |||||||||||| || ||||||||||||||||    
T  134634 tccgatcttaattataagaaaaactttactttttatattcatt 134592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 372 - 434
Target Start/End: Original strand, 18135395 - 18135457
Alignment:
Q  372 caaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||||||||| || ||||||||| ||| |||||||||||||| | || || |||||||||||||    
T  18135395 caaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagg 18135457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 436
Target Start/End: Complemental strand, 23125714 - 23125648
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||| || |||| |||| ||| |||||||||||||| | || || |||||||||||||||    
T  23125714 accaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggga 23125648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 432
Target Start/End: Original strand, 31854459 - 31854521
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccgga 432  Q
    ||||||||||| || |||| |||| ||| |||||||||||||||| || || |||||||||||    
T  31854459 accaaatacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccgga 31854521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 436
Target Start/End: Complemental strand, 39877471 - 39877405
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||| || |||| |||| ||| ||||||||||| |||| || || |||||||||||||||    
T  39877471 accaaatacataaattatttaatgtatctaaaaagtaaatcgtttcttgtaaataggaccggaggga 39877405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 436
Target Start/End: Complemental strand, 54612042 - 54611976
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||| || |||| |||| ||| |||||||||||||| | ||||| |||| ||||||||||    
T  54612042 accaaatacataaattatttaatgtatctaaaaagtaaattgtgtcttataaatagaaccggaggga 54611976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 436
Target Start/End: Complemental strand, 48361123 - 48361054
Alignment:
Q  367 tagaccaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||| |||||||| || || |||||||||| ||||||| || | ||| ||||| |||||||||||||||    
T  48361123 tagacaaaatacatcaattactcaatgaatctaaaaagtcaaatttttcttataaataggaccggaggga 48361054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 295 - 339
Target Start/End: Original strand, 23226954 - 23226998
Alignment:
Q  295 tctccgatcttatttataagaaaaagttaactttttatattcatt 339  Q
    |||||||| |||||||||||||||| || |||||||| |||||||    
T  23226954 tctccgattttatttataagaaaaaattgactttttagattcatt 23226998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 370 - 434
Target Start/End: Complemental strand, 36099555 - 36099491
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||||||||||| || |||| |||| ||| |||||||||||||| | || || |||||||||||||    
T  36099555 accaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagg 36099491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 370 - 434
Target Start/End: Original strand, 49122600 - 49122664
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    |||||||| || || ||||||||| ||| |||||||||||||| | || || |||||||||||||    
T  49122600 accaaatatataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagg 49122664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 290 - 346
Target Start/End: Complemental strand, 54612113 - 54612057
Alignment:
Q  290 tactttctccgatcttatttataagaaaaagttaactttttatattcatttaataat 346  Q
    ||||| |||||||||||||||||||| |||||| || ||||| || |||| ||||||    
T  54612113 tacttcctccgatcttatttataagagaaagttgaccttttaaatacattgaataat 54612057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 108; Significance: 6e-54; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 297 - 436
Target Start/End: Original strand, 12958782 - 12958921
Alignment:
Q  297 tccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaat 396  Q
    ||||||| ||||||||||||||||||||||||||| ||||||| |||||||||| || ||||| |||||||||||||||||||| |||||||||||||||    
T  12958782 tccgatcctatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcttagaaatagaccaaatacatcaactattcaatgaat 12958881  T
Q  397 caaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    |||||||||||||||||| |||||||||||||||||||||    
T  12958882 caaaaaagtaaattgtttcttatatataggaccggaggga 12958921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 305 - 436
Target Start/End: Original strand, 44796356 - 44796487
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaatcaaaaaag 404  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||| ||  ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  44796356 tatttataagaaaaagttaactttttagattcattcaataattgatgtacatagcctagaaatagaccaaatacatcaactattcaatgaatcaaaaaag 44796455  T
Q  405 taaattgttttttatatataggaccggaggga 436  Q
    |||||||||| |||||||||||||||||||||    
T  44796456 taaattgtttcttatatataggaccggaggga 44796487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 296 - 436
Target Start/End: Complemental strand, 36366167 - 36366027
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| || |||||||||||||||||||| |||||| ||||||| |||||||||| || |||||||||||||||||||||||||| ||||||| ||||||    
T  36366167 ctccggtcctatttataagaaaaagttaattttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattgaatgaa 36366068  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  36366067 tcaaaaaagtaaattgtttcttatatataggaccggaggga 36366027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 289 - 434
Target Start/End: Original strand, 42786362 - 42786506
Alignment:
Q  289 atactttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactatt 388  Q
    ||||| |||||| |||||||||||||||||||||||||||||| ||||||| |||||||||| ||  |||| ||||||||||||||||||||||||||||    
T  42786362 atactatctccggtcttatttataagaaaaagttaactttttagattcattcaataattgatgtacttagcttagaaatagaccaaatacattaactatt 42786461  T
Q  389 caatgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    |||| |||| |||||||||||||||| |||||||||||||||||||    
T  42786462 caataaatc-aaaaagtaaattgtttcttatatataggaccggagg 42786506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 296 - 436
Target Start/End: Original strand, 22429540 - 22429680
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| || |||||||||||||||||||| |||||| ||| ||| ||||||| || || |||||||||||||||||||||||||| ||||||||||||||    
T  22429540 ctccggtcctatttataagaaaaagttaattttttagatttattcaataattaatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 22429639  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  22429640 tcaaaaaagtaaattgtttcttatatataggaccggaggga 22429680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 286 - 436
Target Start/End: Original strand, 6899415 - 6899565
Alignment:
Q  286 ataatactttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaact 385  Q
    ||||||||  ||||| || ||||||||||||||| ||||||||| | ||||||| |||||||||| || ||| |||||||||||| ||||||||| ||||    
T  6899415 ataatactacctccggtcctatttataagaaaaatttaacttttgagattcattcaataattgatgtacctaacctagaaatagatcaaatacatcaact 6899514  T
Q  386 attcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6899515 attcaatgaatcaaaaaagtaaattgtttcttatatataggaccggaggga 6899565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 286 - 436
Target Start/End: Original strand, 35011207 - 35011359
Alignment:
Q  286 ataatactttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaact 385  Q
    ||||||||  ||||| || |||||||||||||||||||| |||||| ||||||| ||||||| || || |||||||||||||||||||||||||| ||||    
T  35011207 ataatactacctccggtcctatttataagaaaaagttaattttttagattcattcaataattaatgtacctagcctagaaatagaccaaatacatcaact 35011306  T
Q  386 attcaatgaatcaaaaaagtaaattgtt--ttttatatataggaccggaggga 436  Q
    ||||||||||||||||||||||||||||  || ||||||||||||||||||||    
T  35011307 attcaatgaatcaaaaaagtaaattgtttcttatatatataggaccggaggga 35011359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 296 - 436
Target Start/End: Original strand, 24177977 - 24178117
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| || ||||||||||||||||||||||||||| ||||||| |||| ||||| || ||||| |||||||||||||||||||| ||||||||||||||    
T  24177977 ctccggtcctatttataagaaaaagttaactttttagattcattcaatatttgatgtacctagcttagaaatagaccaaatacatcaactattcaatgaa 24178076  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    |||||||| |||| ||||| |||||||||| ||||||||||    
T  24178077 tcaaaaaaataaactgtttcttatatatagaaccggaggga 24178117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 296 - 434
Target Start/End: Original strand, 32575176 - 32575318
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatt----taactagcctagaaatagaccaaatacattaactattcaa 391  Q
    ||||| || |||||| |||||||||||||||||||| ||||||| |||||||||||    || |||||||| ||||||||||||||||| || |||||||    
T  32575176 ctccggtcctatttacaagaaaaagttaactttttagattcattcaataattgattgatgtacctagcctaaaaatagaccaaatacatcaattattcaa 32575275  T
Q  392 tgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  32575276 tgaataaaaaaagtaaattgttttttatatataggaccggagg 32575318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 305 - 413
Target Start/End: Complemental strand, 24915303 - 24915195
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaatcaaaaaag 404  Q
    |||||||| |||||| ||||||||||| ||||||| |||||||||| || ||||| ||||||||||| |||||||| || |||| ||||||||||||||     
T  24915303 tatttatatgaaaaaattaactttttagattcattaaataattgatgtatctagcttagaaatagacaaaatacatcaattatttaatgaatcaaaaaaa 24915204  T
Q  405 taaattgtt 413  Q
    |||||||||    
T  24915203 taaattgtt 24915195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 290 - 427
Target Start/End: Original strand, 5031463 - 5031601
Alignment:
Q  290 tactttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactatt 388  Q
    ||||| ||||| || ||||||||||||||| ||||||||||| ||||||| | |||||||| || || | |||||| |||||| |||||||| |  |||     
T  5031463 tacttcctccggtcctatttataagaaaaatttaactttttaaattcattaagtaattgatgtatcttgtctagaatatagactaaatacatcatttatg 5031562  T
Q  389 caatgaatcaaaaaagtaaattgttttttatatatagga 427  Q
    ||||||||||||||||| || ||||| ||||| ||||||    
T  5031563 caatgaatcaaaaaagtcaaatgtttcttataaatagga 5031601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 305 - 434
Target Start/End: Original strand, 8803242 - 8803372
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaaaa 403  Q
    |||||| |||||||||||||||||||||||| |||   ||||| || || || | |||||| ||||||||||||||| |  |||  ||||||||||||||    
T  8803242 tatttacaagaaaaagttaactttttatatttattatgtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgtaatgaatcaaaaaa 8803341  T
Q  404 gtaaattgttttttatatataggaccggagg 434  Q
    || || | ||||||||| |||||| ||||||    
T  8803342 gttaaatattttttataaataggatcggagg 8803372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 366 - 436
Target Start/End: Complemental strand, 10396864 - 10396794
Alignment:
Q  366 atagaccaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    |||||||| ||||||||  |||||||| |||| |||||||||||||||||||||| ||||||| |||||||    
T  10396864 atagaccatatacattagttattcaattaatctaaaaagtaaattgttttttataaataggactggaggga 10396794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 306 - 434
Target Start/End: Complemental strand, 16448922 - 16448793
Alignment:
Q  306 atttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaaaag 404  Q
    |||||||||||||| ||||||||||| ||||||| | |||||||| || ||    ||||| ||| |||||||| || |  ||| ||||||||||||||||    
T  16448922 atttataagaaaaatttaactttttagattcattgagtaattgatgtatcttatatagaatataaaccaaatatatcatttatgcaatgaatcaaaaaag 16448823  T
Q  405 taaattgttttttatatataggaccggagg 434  Q
    | || ||||| ||||| |||||||||||||    
T  16448822 tcaaatgtttcttataaataggaccggagg 16448793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 296 - 436
Target Start/End: Original strand, 3236337 - 3236476
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaat-agaccaaatacattaactattcaatga 394  Q
    ||||||||||||||||  |||||| || |||||||| ||||||| |||||||||| || ||||  || || | ||||||||||||| |  ||| ||||||    
T  3236337 ctccgatcttatttat--gaaaaaattgactttttaaattcattgaataattgatgtatctagtttaaaatttagaccaaatacatcatttatacaatga 3236434  T
Q  395 atcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    || |||||||| || | ||| ||||| ||| |||||||||||    
T  3236435 attaaaaaagtcaaatatttcttataaatatgaccggaggga 3236476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 370 - 434
Target Start/End: Original strand, 30924001 - 30924065
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||||||||||| || |||| |||| ||| |||||||||||||| ||||||| |||||||||||||    
T  30924001 accaaatacataaattatttaatgtatctaaaaagtaaattgtcttttataaataggaccggagg 30924065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 289 - 435
Target Start/End: Complemental strand, 22782032 - 22781885
Alignment:
Q  289 atactttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaa-tagaccaaatacattaactat 387  Q
    |||||| ||||| || ||||||||||| |||||| | |||||  || |||| ||||||  || || |||| | ||||  || ||||||||||| || |||    
T  22782032 atacttcctccggtcctatttataagagaaagttgattttttggatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattat 22781933  T
Q  388 tcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggg 435  Q
    | |||| ||| |||||||||||||||| || || ||||||||||||||    
T  22781932 ttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggaggg 22781885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 305 - 431
Target Start/End: Complemental strand, 35149802 - 35149675
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaaaa 403  Q
    |||||||||||||||||| | |||||| ||| |||   ||||| || || || | |||||| ||||||||||||||| |  ||| |||| ||||||||||    
T  35149802 tatttataagaaaaagttgattttttagatttattgtgtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgcaattaatcaaaaaa 35149703  T
Q  404 gtaaattgttttttatatataggaccgg 431  Q
    || || ||||| ||||| ||||||||||    
T  35149702 gtcaaatgtttcttataaataggaccgg 35149675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 432
Target Start/End: Original strand, 7693113 - 7693175
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccgga 432  Q
    |||||||||||||| || |||||||||| ||||||| |||| ||| ||||| |||||||||||    
T  7693113 accaaatacattaattactcaatgaatctaaaaagtcaattttttcttataaataggaccgga 7693175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 288 - 350
Target Start/End: Complemental strand, 10184702 - 10184640
Alignment:
Q  288 aatactttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgat 350  Q
    ||||||| |||||||| ||||||||||||||| |  |||||||| ||||||| ||||||||||    
T  10184702 aatacttcctccgatcatatttataagaaaaaatcgactttttagattcattgaataattgat 10184640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 290 - 436
Target Start/End: Complemental strand, 42123117 - 42122968
Alignment:
Q  290 tactttctccgatcttatttataagaaaaag--ttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaacta 386  Q
    ||||| ||||| |||||||||||| |||||   || |||||||| ||||||| | ||||| || || || | |||||| ||| ||||||||||| |  ||    
T  42123117 tacttcctccggtcttatttataaaaaaaaaaattgactttttagattcattgagtaattaatgtatcttgtctagaatatataccaaatacatcattta 42123018  T
Q  387 ttcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    | ||||||||||||||||| ||  |||| ||||| ||||||| |||||||    
T  42123017 tgcaatgaatcaaaaaagtcaaacgtttcttataaataggactggaggga 42122968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 296 - 436
Target Start/End: Complemental strand, 2339433 - 2339292
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaa-tagaccaaatacattaactattcaatga 394  Q
    ||||| || |||||| |||| |||||| |||||||| || |||| ||||||  || || |||| | ||||  || ||||||||||| || |||| ||||     
T  2339433 ctccggtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgt 2339334  T
Q  395 atcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||| |||||||||||||| | || || |||||||||||||||    
T  2339333 atctaaaaagtaaattgtctcttgtaaataggaccggaggga 2339292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 288 - 436
Target Start/End: Complemental strand, 29563809 - 29563660
Alignment:
Q  288 aatactttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaa-tagaccaaatacattaacta 386  Q
    ||||||| ||||| || |||||| |||| |||||| |||||||| || |||| ||||||  || || ||||   ||||  || ||||||||||| || ||    
T  29563809 aatacttcctccggtcctatttacaagagaaagttgactttttagatacattcaataatgtatgtatctagttaagaacctaaaccaaatacataaatta 29563710  T
Q  387 ttcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    || |||| ||| |||||||||||||| | || || |||||||||||||||    
T  29563709 tttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggga 29563660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 375 - 436
Target Start/End: Original strand, 43932134 - 43932195
Alignment:
Q  375 atacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||| ||||||||||||| ||||||| |||||||| |||||   |||||||||||||    
T  43932134 atacattaattattcaatgaatctaaaaagtcaattgtttcttataataaggaccggaggga 43932195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 434
Target Start/End: Original strand, 2229150 - 2229214
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||||||||||| || ||||||||| ||| |||||||||||||| | || || |||||||||||||    
T  2229150 accaaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagg 2229214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 436
Target Start/End: Complemental strand, 7693167 - 7693035
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaaaa 403  Q
    ||||||||||||||| || |||||||| ||||||| | ||||| || ||  | |  || || |||||| |||||||| |  ||| |||||||||||||||    
T  7693167 tatttataagaaaaaattgactttttagattcattgagtaattaatgtatttggtataaaatatagactaaatacatcatttatgcaatgaatcaaaaaa 7693068  T
Q  404 gtaaattgttttttatatataggaccggaggga 436  Q
    ||||| ||||| ||||| ||||||  |||||||    
T  7693067 gtaaaatgtttcttataaataggattggaggga 7693035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 434
Target Start/End: Complemental strand, 10839831 - 10839767
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||||| |||||||| ||||||||||||| ||||||| |||| ||| ||||| ||||||| |||||    
T  10839831 accaagtacattaattattcaatgaatctaaaaagtcaattttttcttataaataggactggagg 10839767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 289 - 436
Target Start/End: Complemental strand, 34745407 - 34745259
Alignment:
Q  289 atactttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaa-atacattaactat 387  Q
    |||||||||||||||||  |||||||||| | || | |||||| |||||||   ||| |||| || |||| ||| |  || | ||| ||||||||| |||    
T  34745407 atactttctccgatctttattataagaaacatttgattttttagattcattatgtaagtgatgtatctagtctatatttataacaagatacattaattat 34745308  T
Q  388 tcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    || ||||| ||||||||| |||||||| |||||   |||||||||||||    
T  34745307 tctatgaaccaaaaaagtcaattgtttcttataataaggaccggaggga 34745259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 405
Target Start/End: Complemental strand, 9503512 - 9503473
Alignment:
Q  366 atagaccaaatacattaactattcaatgaatcaaaaaagt 405  Q
    |||||||||||||||||| ||||||||||||| |||||||    
T  9503512 atagaccaaatacattaaatattcaatgaatcgaaaaagt 9503473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 405
Target Start/End: Original strand, 9503614 - 9503653
Alignment:
Q  366 atagaccaaatacattaactattcaatgaatcaaaaaagt 405  Q
    |||||||||||||||||| ||||||||||||| |||||||    
T  9503614 atagaccaaatacattaaatattcaatgaatctaaaaagt 9503653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 436
Target Start/End: Complemental strand, 34028536 - 34028385
Alignment:
Q  286 ataatactttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaa-tagaccaaatacattaac 384  Q
    ||||||||  ||||| || |||||| |||| |||||| || ||||| || |||| ||||||  || || |||| | ||||  || ||||||||||| ||     
T  34028536 ataatactccctccggtcctatttacaagagaaagttgaccttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaat 34028437  T
Q  385 tattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    |||| |||| ||| |||||||||||||||  || || |||||||||||||||    
T  34028436 tatttaatgtatctaaaaagtaaattgttacttgtaaataggaccggaggga 34028385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 436
Target Start/End: Original strand, 12270136 - 12270202
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||| || |||| |||| ||| |||||||||||||| | || || |||||||||||||||    
T  12270136 accaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggga 12270202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 339
Target Start/End: Complemental strand, 32597640 - 32597598
Alignment:
Q  297 tccgatcttatttataagaaaaagttaactttttatattcatt 339  Q
    |||| |||||||||||||||||||||||||||| | |||||||    
T  32597640 tccggtcttatttataagaaaaagttaacttttaaaattcatt 32597598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 436
Target Start/End: Complemental strand, 41915662 - 41915596
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||| || |||| |||| ||| ||||| |||||||| | ||||| |||||||||||||||    
T  41915662 accaaatacataaattatttaatgtatctaaaaattaaattgtctcttataaataggaccggaggga 41915596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 436
Target Start/End: Original strand, 24822808 - 24822869
Alignment:
Q  375 atacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||| ||| |||| |||| ||||||| |||| ||| ||||| |||||||||||||||    
T  24822808 atacattaattatacaataaatctaaaaagtcaattttttcttataaataggaccggaggga 24822869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 436
Target Start/End: Complemental strand, 43292631 - 43292570
Alignment:
Q  375 atacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||| ||||| ||||| ||||||||| |||||||| |||||   |||||||||||||    
T  43292631 atacattaattattctatgaaccaaaaaagtcaattgtttcttataataaggaccggaggga 43292570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 346
Target Start/End: Original strand, 43295069 - 43295118
Alignment:
Q  297 tccgatcttatttataagaaaaagttaactttttatattcatttaataat 346  Q
    ||||||| ||||||||||| ||||||||||||||| || |||| ||||||    
T  43295069 tccgatcctatttataagagaaagttaactttttagatacattgaataat 43295118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 434
Target Start/End: Complemental strand, 24619030 - 24618962
Alignment:
Q  366 atagaccaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||||||||||||||| |  ||| ||||||||||||||||| ||  |||| ||||| ||||||| |||||    
T  24619030 atagaccaaatacatcatttatgcaatgaatcaaaaaagtcaaaggtttcttataaataggactggagg 24618962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 370 - 406
Target Start/End: Complemental strand, 30857293 - 30857257
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagta 406  Q
    |||||||||||||| ||||||||||||| ||||||||    
T  30857293 accaaatacattaaatattcaatgaatctaaaaagta 30857257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 108; Significance: 6e-54; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 296 - 443
Target Start/End: Original strand, 45034403 - 45034550
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| || ||||||||||||||||||||||||||| ||||||| |||||||||| || ||| |||||||||||||||||||||| ||||||||||||||    
T  45034403 ctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacctaacctagaaatagaccaaatacatcaactattcaatgaa 45034502  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggagggactacctc 443  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  45034503 tcaaaaaagtaaattgtttcttatatataggaccggagggagtacctc 45034550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 296 - 436
Target Start/End: Original strand, 45571035 - 45571175
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| || ||||||||||||||| ||||||||||| ||||||| |||||||||| || |||||||||||||||||||||||||| ||||||||||||||    
T  45571035 ctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 45571134  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  45571135 tcaaaaaagtaaattgtttcttatatataggaccggaggga 45571175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 296 - 436
Target Start/End: Original strand, 45574702 - 45574842
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| || ||||||||||||||| ||||||||||| ||||||| |||||||||| || |||||||||||||||||||||||||| ||||||||||||||    
T  45574702 ctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 45574801  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  45574802 tcaaaaaagtaaattgtttcttatatataggaccggaggga 45574842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 296 - 436
Target Start/End: Original strand, 45578369 - 45578509
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| || ||||||||||||||| ||||||||||| ||||||| |||||||||| || |||||||||||||||||||||||||| ||||||||||||||    
T  45578369 ctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 45578468  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  45578469 tcaaaaaagtaaattgtttcttatatataggaccggaggga 45578509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 296 - 436
Target Start/End: Original strand, 45582036 - 45582176
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| || ||||||||||||||| ||||||||||| ||||||| |||||||||| || |||||||||||||||||||||||||| ||||||||||||||    
T  45582036 ctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 45582135  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  45582136 tcaaaaaagtaaattgtttcttatatataggaccggaggga 45582176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 296 - 436
Target Start/End: Original strand, 45585703 - 45585843
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| || ||||||||||||||| ||||||||||| ||||||| |||||||||| || |||||||||||||||||||||||||| ||||||||||||||    
T  45585703 ctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 45585802  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  45585803 tcaaaaaagtaaattgtttcttatatataggaccggaggga 45585843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 296 - 436
Target Start/End: Original strand, 45589370 - 45589510
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| || ||||||||||||||| ||||||||||| ||||||| |||||||||| || |||||||||||||||||||||||||| ||||||||||||||    
T  45589370 ctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 45589469  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  45589470 tcaaaaaagtaaattgtttcttatatataggaccggaggga 45589510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 296 - 436
Target Start/End: Original strand, 45593037 - 45593177
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| || ||||||||||||||| ||||||||||| ||||||| |||||||||| || |||||||||||||||||||||||||| ||||||||||||||    
T  45593037 ctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 45593136  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  45593137 tcaaaaaagtaaattgtttcttatatataggaccggaggga 45593177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 296 - 436
Target Start/End: Original strand, 45596704 - 45596844
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| || ||||||||||||||| ||||||||||| ||||||| |||||||||| || |||||||||||||||||||||||||| ||||||||||||||    
T  45596704 ctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 45596803  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  45596804 tcaaaaaagtaaattgtttcttatatataggaccggaggga 45596844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 296 - 436
Target Start/End: Original strand, 45600371 - 45600511
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| || ||||||||||||||| ||||||||||| ||||||| |||||||||| || |||||||||||||||||||||||||| ||||||||||||||    
T  45600371 ctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 45600470  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  45600471 tcaaaaaagtaaattgtttcttatatataggaccggaggga 45600511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 296 - 436
Target Start/End: Original strand, 45604038 - 45604178
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| || ||||||||||||||| ||||||||||| ||||||| |||||||||| || |||||||||||||||||||||||||| ||||||||||||||    
T  45604038 ctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 45604137  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  45604138 tcaaaaaagtaaattgtttcttatatataggaccggaggga 45604178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 296 - 436
Target Start/End: Original strand, 45607705 - 45607845
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| || ||||||||||||||| ||||||||||| ||||||| |||||||||| || |||||||||||||||||||||||||| ||||||||||||||    
T  45607705 ctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 45607804  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  45607805 tcaaaaaagtaaattgtttcttatatataggaccggaggga 45607845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 296 - 436
Target Start/End: Original strand, 45611372 - 45611512
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| || ||||||||||||||| ||||||||||| ||||||| |||||||||| || |||||||||||||||||||||||||| ||||||||||||||    
T  45611372 ctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 45611471  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  45611472 tcaaaaaagtaaattgtttcttatatataggaccggaggga 45611512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 296 - 436
Target Start/End: Original strand, 45615039 - 45615179
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| || ||||||||||||||| ||||||||||| ||||||| |||||||||| || |||||||||||||||||||||||||| ||||||||||||||    
T  45615039 ctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 45615138  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  45615139 tcaaaaaagtaaattgtttcttatatataggaccggaggga 45615179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 305 - 436
Target Start/End: Complemental strand, 4044708 - 4044577
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaatcaaaaaag 404  Q
    ||||||||||||||||| || |||||| ||||||| |||||||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4044708 tatttataagaaaaagtaaaatttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaatcaaaaaag 4044609  T
Q  405 taaattgttttttatatataggaccggaggga 436  Q
    |||||||||| |||||||||||| || |||||    
T  4044608 taaattgtttcttatatataggatcgaaggga 4044577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 305 - 436
Target Start/End: Original strand, 4063286 - 4063417
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaatcaaaaaag 404  Q
    |||||||||||||||||||| |||||| ||||||| |||||||||| || |||  |||||||||||| |||||||| |||||||||||||||||||||||    
T  4063286 tatttataagaaaaagttaattttttagattcattcaataattgatgtacctactctagaaatagacaaaatacatcaactattcaatgaatcaaaaaag 4063385  T
Q  405 taaattgttttttatatataggaccggaggga 436  Q
    |||||||||| |||||||||||||||||||||    
T  4063386 taaattgtttcttatatataggaccggaggga 4063417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 306 - 432
Target Start/End: Original strand, 15384442 - 15384568
Alignment:
Q  306 atttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaatcaaaaaagt 405  Q
    |||||||||||||| ||||||||||| ||| |||||||||||||| || ||||| | |||||||||||||||||| ||||||||||||||||||||||||    
T  15384442 atttataagaaaaaattaactttttagatttatttaataattgatgtacctagcttggaaatagaccaaatacatcaactattcaatgaatcaaaaaagt 15384541  T
Q  406 aaattgttttttatatataggaccgga 432  Q
    ||||||||| |||||||||||||||||    
T  15384542 aaattgtttcttatatataggaccgga 15384568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 305 - 434
Target Start/End: Complemental strand, 3838551 - 3838422
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaatcaaaaaag 404  Q
    ||||||||||||||||||||||||||| ||||||| ||| |||||| ||  | | ||||||||||||||||||||| |||||||||||||||||||||||    
T  3838551 tatttataagaaaaagttaactttttagattcattcaatgattgatgtacttcgtctagaaatagaccaaatacatcaactattcaatgaatcaaaaaag 3838452  T
Q  405 taaattgttttttatatataggaccggagg 434  Q
    |||||||||| ||||||||||||| |||||    
T  3838451 taaattgtttcttatatataggactggagg 3838422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 296 - 436
Target Start/End: Complemental strand, 9152522 - 9152381
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatga 394  Q
    ||||| ||||||||| |||||| | || |||||||| ||||||| | |||||||| || |||| ||| || ||||||||||||||| || |||| |||||    
T  9152522 ctccggtcttatttacaagaaacaattgactttttagattcattgagtaattgatgtatctagtctaaaatatagaccaaatacatcaattatttaatga 9152423  T
Q  395 atcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
     |||||||||| || ||||| || || |||||||||||||||    
T  9152422 ctcaaaaaagtcaaatgtttcttgtaaataggaccggaggga 9152381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 289 - 436
Target Start/End: Original strand, 20555256 - 20555403
Alignment:
Q  289 atactttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactat 387  Q
    ||||| |||||| || ||||||||||||||| |||| |||||| || |||| |||||||||| || || | |||||| |||||||||||||||||  |||    
T  20555256 atactatctccggtcctatttataagaaaaaattaattttttagatacattgaataattgatgtatcttgtctagaatatagaccaaatacattatttat 20555355  T
Q  388 tcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
      ||||||| |||||||| || |||||  |||| |||||||||||||||    
T  20555356 gtaatgaat-aaaaaagttaaatgtttcctataaataggaccggaggga 20555403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 290 - 436
Target Start/End: Original strand, 12962704 - 12962851
Alignment:
Q  290 tactttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactatt 388  Q
    ||||||||| | ||||||||||||||||||||| |||||||| ||||||| | ||||| || ||  | |  || || ||||||||||||||| |  |||     
T  12962704 tactttctcaggtcttatttataagaaaaagttgactttttagattcattgagtaattaatgtacttggtataaaatatagaccaaatacatcatttatg 12962803  T
Q  389 caatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||||| || ||||| ||||| |||||||| ||||||    
T  12962804 caatgaatcaaaaaagtcaaatgtttcttataaataggaccagaggga 12962851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 305 - 434
Target Start/End: Complemental strand, 11030326 - 11030196
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaaaa 403  Q
    ||||||||||||||| ||||||||||| ||||||| | |||||||| || ||    ||||| ||||||||||||||| |  |||  ||||||||||||||    
T  11030326 tatttataagaaaaaattaactttttagattcattgagtaattgatgtatctgatatagaatatagaccaaatacatcatttatgtaatgaatcaaaaaa 11030227  T
Q  404 gtaaattgttttttatatataggaccggagg 434  Q
    || || ||||| |||||||||||| ||||||    
T  11030226 gtcaaatgtttcttatatataggatcggagg 11030196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 305 - 436
Target Start/End: Complemental strand, 38983133 - 38983001
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaaaa 403  Q
    ||||||||| |||||||| | |||||| |||||||   |||||||| || || | |||||| |||||| |||||||| |  ||| |||||||||||||||    
T  38983133 tatttataaaaaaaagttgattttttagattcattgtgtaattgatgtatcttgtctagaatatagacaaaatacatcatttatgcaatgaatcaaaaaa 38983034  T
Q  404 gtaaattgttttttatatataggaccggaggga 436  Q
    || || | ||||||||| |||||||||||||||    
T  38983033 gtcaaatattttttataaataggaccggaggga 38983001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 295 - 429
Target Start/End: Complemental strand, 38554602 - 38554467
Alignment:
Q  295 tctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatg 393  Q
    |||||| || ||||||||||||||||||||||||||| ||||||| | ||||| || ||  | |  ||||| |||||||||||||||||  |||  ||||    
T  38554602 tctccggtcctatttataagaaaaagttaactttttaaattcattgagtaattaatgtacttggtatagaatatagaccaaatacattatttatgtaatg 38554503  T
Q  394 aatcaaaaaagtaaattgttttttatatataggacc 429  Q
    |||||||| ||| || ||||| ||||| ||||||||    
T  38554502 aatcaaaatagtcaaatgtttcttataaataggacc 38554467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 296 - 436
Target Start/End: Original strand, 30761383 - 30761524
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatga 394  Q
    ||||| || ||||||||||||| | || |||||||| ||||||| | ||||| ||||| || | |||||| |||||| ||||||||    | | ||||||    
T  30761383 ctccggtcctatttataagaaacatttgactttttacattcattgagtaattaatttatcttgtctagaatatagactaaatacatattttgtgcaatga 30761482  T
Q  395 atcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||| || ||||| ||||| |||||||||||||||    
T  30761483 atcaaaaaagtcaaatgtttcttataaataggaccggaggga 30761524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 296 - 420
Target Start/End: Complemental strand, 41153254 - 41153129
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatga 394  Q
    |||||||| |||||||||||||||||| |||||||| ||||||| | |||||||| ||  | |  || || ||||||||||||||| |  ||| ||||||    
T  41153254 ctccgatcctatttataagaaaaagttgactttttagattcattgagtaattgatgtatttggtttataatatagaccaaatacatcatttatgcaatga 41153155  T
Q  395 atcaaaaaagtaaattgttttttata 420  Q
    ||||||||||| || ||||| |||||    
T  41153154 atcaaaaaagtcaaatgtttcttata 41153129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 306 - 429
Target Start/End: Complemental strand, 32457346 - 32457222
Alignment:
Q  306 atttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaaaag 404  Q
    |||||||||||||| || |||||||| ||||||| | |||||||| || || | |||||| |||||| |||||||| |  ||| ||||||||||||||||    
T  32457346 atttataagaaaaatttgactttttagattcattaagtaattgatgtatcttgtctagaatatagactaaatacatcatttatgcaatgaatcaaaaaag 32457247  T
Q  405 taaattgttttttatatataggacc 429  Q
    | || | ||| ||||| ||||||||    
T  32457246 tcaaatatttcttataaataggacc 32457222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 436
Target Start/End: Original strand, 12486059 - 12486138
Alignment:
Q  358 gcctagaa-atagaccaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    |||||||| ||||||||||||||| || ||||||||||||| ||||||| |||||||| || || |||||||| ||||||    
T  12486059 gcctagaatatagaccaaatacatcaattattcaatgaatctaaaaagtcaattgtttcttgtaaataggaccagaggga 12486138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 286 - 339
Target Start/End: Original strand, 5109358 - 5109411
Alignment:
Q  286 ataatactttctccgatcttatttataagaaaaagttaactttttatattcatt 339  Q
    |||||||| |||||| || ||||||||||||||||||||||||||| |||||||    
T  5109358 ataatactctctccggtcctatttataagaaaaagttaactttttagattcatt 5109411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 289 - 436
Target Start/End: Complemental strand, 41260175 - 41260027
Alignment:
Q  289 atactttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaa-tagaccaaatacattaactat 387  Q
    |||||| ||||| || |||||| |||| |||||  |||||||| || |||| ||||||  || || |||| | ||||  || ||||||||||| || |||    
T  41260175 atacttcctccggtcctatttacaagagaaagtcgactttttaaatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattat 41260076  T
Q  388 tcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    | |||| |||||||||||||||||| | || || |||||||||||||||    
T  41260075 ttaatgtatcaaaaaagtaaattgtctcttgtaaataggaccggaggga 41260027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 296 - 436
Target Start/End: Complemental strand, 43714116 - 43713976
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| || |||||||||||||   || |||||||| ||| | | | |||||||| || || | ||| | ||||||||||||||| |  |||||||||||    
T  43714116 ctccggtcctatttataagaaatttttgactttttagatttactgagtaattgatgtatcttgtctaaatatagaccaaatacataatttattcaatgaa 43714017  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    |||||||| | |||||||| ||||| ||| || ||||||||    
T  43714016 tcaaaaaaatcaattgtttcttataaataagagcggaggga 43713976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 296 - 434
Target Start/End: Complemental strand, 6761608 - 6761469
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatga 394  Q
    ||||| || |||||| |||| | |||| |||||||| || |||| ||||||  || || |||| | |||| ||| ||||||||||| || |||||||||     
T  6761608 ctccggtcctatttacaagagacagttgactttttagatacattgaataatgtatgtatctagtcaagaacataaaccaaatacataaattattcaatgt 6761509  T
Q  395 atcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||| |||||||||||||| | || || |||||||||||||    
T  6761508 atctaaaaagtaaattgtctcttgtaaataggaccggagg 6761469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 296 - 434
Target Start/End: Original strand, 25891949 - 25892088
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaa-tagaccaaatacattaactattcaatga 394  Q
    |||||||| ||||||||||| | |||| |||||||| ||  ||| ||||||  || || |||| | ||||  || ||||||||||| || |||||||||     
T  25891949 ctccgatcctatttataagagacagttgactttttagataaattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattattcaatgt 25892048  T
Q  395 atcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||| |||||||||||||| | || || |||||||||||||    
T  25892049 atctaaaaagtaaattgtctcttgtaaataggaccggagg 25892088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 299 - 433
Target Start/End: Original strand, 40430674 - 40430809
Alignment:
Q  299 cgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaa-tagaccaaatacattaactattcaatgaatc 397  Q
    ||||| ||||||||||| ||| || |||||||| || |||| ||||||  || || |||| | ||||  || ||||||||||| || |||| |||| |||    
T  40430674 cgatcctatttataagagaaaattgactttttagatacattcaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatc 40430773  T
Q  398 aaaaaagtaaattgttttttatatataggaccggag 433  Q
     |||||||||||||| | ||||| ||||||||||||    
T  40430774 taaaaagtaaattgtctcttataaataggaccggag 40430809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 305 - 405
Target Start/End: Complemental strand, 28249067 - 28248966
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaaaa 403  Q
    |||||||||||||||||| |||||||| ||||||| ||||||| || ||  | |  ||||| |||||| ||||||||||  ||| |||| ||||||||||    
T  28249067 tatttataagaaaaagttgactttttagattcattaaataattaatgtatttggtatagaatatagactaaatacattatttatgcaattaatcaaaaaa 28248968  T
Q  404 gt 405  Q
    ||    
T  28248967 gt 28248966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 434
Target Start/End: Original strand, 16241347 - 16241411
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||||||||||| || ||||||||| ||| |||||||||||||| | || || |||||||||||||    
T  16241347 accaaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagg 16241411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 434
Target Start/End: Original strand, 44737362 - 44737426
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||||||||||| || ||||||||| ||| |||||||||||||| | || || |||||||||||||    
T  44737362 accaaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagg 44737426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 370 - 433
Target Start/End: Complemental strand, 5109431 - 5109368
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggag 433  Q
    |||||||||||||| || |||||||||| ||||||| || | ||| ||||| ||||||||||||    
T  5109431 accaaatacattaattactcaatgaatctaaaaagttaactttttcttataaataggaccggag 5109368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 306 - 345
Target Start/End: Original strand, 13021716 - 13021755
Alignment:
Q  306 atttataagaaaaagttaactttttatattcatttaataa 345  Q
    |||||||||| ||||||||||||||| |||||||||||||    
T  13021716 atttataagagaaagttaactttttagattcatttaataa 13021755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 436
Target Start/End: Original strand, 25795321 - 25795384
Alignment:
Q  373 aaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||| ||||||||||||| ||||||| |||||||| || ||   |||||||||||||    
T  25795321 aaatacattaattattcaatgaatctaaaaagtcaattgtttcttgtaataaggaccggaggga 25795384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 286 - 436
Target Start/End: Complemental strand, 29866235 - 29866084
Alignment:
Q  286 ataatactttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaa-tagaccaaatacattaac 384  Q
    ||||||||  ||||| || |||||| |||| |||||| ||||||||  | |||| ||||||  || || |||| | ||||  || ||||||||||| ||     
T  29866235 ataatactccctccggtcctatttacaagataaagttgactttttaggtacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaat 29866136  T
Q  385 tattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    |||| |||| ||| |||||||||||||| | || || |||||||||||||||    
T  29866135 tatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggga 29866084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 297 - 335
Target Start/End: Complemental strand, 5281319 - 5281281
Alignment:
Q  297 tccgatcttatttataagaaaaagttaactttttatatt 335  Q
    ||||||| |||||||||||||||||| ||||||||||||    
T  5281319 tccgatcatatttataagaaaaagttgactttttatatt 5281281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 375 - 436
Target Start/End: Original strand, 7943524 - 7943586
Alignment:
Q  375 atacattaactattcaatgaatcaaaaaagtaaattgtttt-ttatatataggaccggaggga 436  Q
    |||||| || ||||||||||||| ||||||| |||| |||| ||||| |||||||||||||||    
T  7943524 atacatcaattattcaatgaatctaaaaagtcaatttttttcttataaataggaccggaggga 7943586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 436
Target Start/End: Original strand, 27596729 - 27596795
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||| || ||||||||| ||| ||||||| ||| || ||| ||| |||||||||||||||    
T  27596729 accaaatacataaattattcaatgtatctaaaaagtcaatcgtctttcataaataggaccggaggga 27596795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 436
Target Start/End: Original strand, 42263550 - 42263616
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||| || |||| |||| ||| |||||||||||||||| || || ||||||| |||||||    
T  42263550 accaaatacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggactggaggga 42263616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 379 - 420
Target Start/End: Original strand, 26194307 - 26194348
Alignment:
Q  379 attaactattcaatgaatcaaaaaagtaaattgttttttata 420  Q
    |||||||||| |||||||| |||||||||| |||||||||||    
T  26194307 attaactatttaatgaatctaaaaagtaaaatgttttttata 26194348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 301 - 350
Target Start/End: Original strand, 33824360 - 33824409
Alignment:
Q  301 atcttatttataagaaaaagttaactttttatattcatttaataattgat 350  Q
    ||||||||||||||||||| || |||||||| ||||||| | ||||||||    
T  33824360 atcttatttataagaaaaatttgactttttaaattcattgagtaattgat 33824409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 3037805 - 3037865
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccg 430  Q
    ||||||||||| || ||||||||||||| ||||| | | |||||| || ||||||||||||    
T  3037805 accaaatacataaattattcaatgaatctaaaaaatcatttgtttcttgtatataggaccg 3037865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 296 - 434
Target Start/End: Complemental strand, 7943583 - 7943443
Alignment:
Q  296 ctccgatcttatttataagaaaaag-ttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatg 393  Q
    ||||| || |||||||||||||||  || |||||||| ||||||| |||||||||| || || | ||| || |||||||||||| || |  ||| |||||    
T  7943583 ctccggtcctatttataagaaaaaaattgactttttagattcattgaataattgatgtatcttgtctacaatatagaccaaatatatcatttatgcaatg 7943484  T
Q  394 aatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||| |||||||| || | | | ||||| ||| |||||||||    
T  7943483 aataaaaaaagtcaaatatctcttataaataagaccggagg 7943443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 370 - 434
Target Start/End: Complemental strand, 18452637 - 18452573
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||||||||||| || ||||||||| ||| |||||||||||||| | || || ||||||| |||||    
T  18452637 accaaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggactggagg 18452573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 404
Target Start/End: Complemental strand, 35728599 - 35728499
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaaaa 403  Q
    ||||||||| ||||| ||  ||||||| ||||||| |||||||||| || || |  ||||| |||||||||||| || |  ||| |||||||||||||||    
T  35728599 tatttataaaaaaaatttggctttttaaattcattgaataattgatgtatcttgtttagaatatagaccaaatatatcatttatgcaatgaatcaaaaaa 35728500  T
Q  404 g 404  Q
    |    
T  35728499 g 35728499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 4e-52; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 296 - 436
Target Start/End: Complemental strand, 27231976 - 27231836
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| || ||||||||||||||||||||||||||| ||||||| |||||||||| || |||||||||||||||||||||||||| ||||||||||||||    
T  27231976 ctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 27231877  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||||||| |||| ||||||||||||||||    
T  27231876 tcaaaaaagtaaattgtttcttatgtataggaccggaggga 27231836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 305 - 436
Target Start/End: Original strand, 4826776 - 4826907
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaatcaaaaaag 404  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||| ||  ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  4826776 tatttataagaaaaagttaactttttagattcattcaataattgatgtacttagcctagaaatagaccaaatacatcaactattcaatgaatcaaaaaag 4826875  T
Q  405 taaattgttttttatatataggaccggaggga 436  Q
    |||||||||| |||||||||||||||||||||    
T  4826876 taaattgtttcttatatataggaccggaggga 4826907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 296 - 434
Target Start/End: Complemental strand, 1366737 - 1366599
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| |||||||||| ||||||||||||||||||| ||||||| |||||||||| || ||||   ||||||||||||||||||| ||||||||||||||    
T  1366737 ctccggtcttatttatcagaaaaagttaactttttagattcattcaataattgatgtacctagttcagaaatagaccaaatacatcaactattcaatgaa 1366638  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  1366637 tcaaaaaagtaaattgtttcttatatataggaccggagg 1366599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 296 - 436
Target Start/End: Complemental strand, 32811520 - 32811380
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| || |||||||||||||||||||| |||||| ||||||| | |||||||| || |||||||||||||||||||||||||| || |||||||||||    
T  32811520 ctccggtcctatttataagaaaaagttaattttttagattcattcagtaattgatgtacctagcctagaaatagaccaaatacatcaattattcaatgaa 32811421  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  32811420 tcaaaaaagtaaattgtttcttatatataggatcggaggga 32811380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 296 - 427
Target Start/End: Original strand, 31227498 - 31227629
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| ||||||||||||||||||||||| |||||| ||||||| |||| ||||| ||  ||||||||||||||||||||||||| ||||||||||||||    
T  31227498 ctccggtcttatttataagaaaaagttaattttttagattcattcaatagttgatgtatttagcctagaaatagaccaaatacatcaactattcaatgaa 31227597  T
Q  396 tcaaaaaagtaaattgttttttatatatagga 427  Q
    ||||||||||||||||||| ||||||||||||    
T  31227598 tcaaaaaagtaaattgtttcttatatatagga 31227629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 287 - 436
Target Start/End: Complemental strand, 28020151 - 28020003
Alignment:
Q  287 taatactttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaacta 386  Q
    |||||||||||||| |||||||||||| ||||| || | |||||| ||||||| |||||||| | || ||  |||||||||||||||||||||| |||||    
T  28020151 taatactttctccggtcttatttataaaaaaaa-ttgattttttagattcattaaataattgttgtatctgacctagaaatagaccaaatacatcaacta 28020053  T
Q  387 ttcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    |||||||||||||||||||||||||||| ||||| |||||||| ||||||    
T  28020052 ttcaatgaatcaaaaaagtaaattgtttcttataaataggaccagaggga 28020003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 315 - 425
Target Start/End: Complemental strand, 42457103 - 42456993
Alignment:
Q  315 aaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaatcaaaaaagtaaattgttt 414  Q
    ||||| ||||||||||| ||| ||| |||||||||| || ||||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  42457103 aaaaaattaactttttagatttattcaataattgatgtacctagcttagaaatagaccaaatacatcaactattcaatgaatcaaaaaagtaaatcgttt 42457004  T
Q  415 tttatatatag 425  Q
     ||||||||||    
T  42457003 cttatatatag 42456993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 296 - 436
Target Start/End: Complemental strand, 28677460 - 28677319
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatga 394  Q
    |||||||| ||||||||||||||| || |||||||| ||| ||| | |||||||| || || | |||||| ||||||||||||||| |  ||| ||||||    
T  28677460 ctccgatcctatttataagaaaaaattgactttttagatttattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatgcaatga 28677361  T
Q  395 atcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||| || ||||| ||||| |||||||||||||||    
T  28677360 atcaaaaaagtcaaatgtttcttataaataggaccggaggga 28677319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 305 - 436
Target Start/End: Complemental strand, 36245510 - 36245378
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaaaa 403  Q
    ||||||||||||||| || |||||||| ||||||| | |||||||| || || | |||||| ||||||||||||||| |  ||| |||||||||||||||    
T  36245510 tatttataagaaaaaattgactttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaaaaa 36245411  T
Q  404 gtaaattgttttttatatataggaccggaggga 436  Q
    || || ||||| ||||| | |||||||||||||    
T  36245410 gtcaaatgtttcttataaacaggaccggaggga 36245378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 327 - 410
Target Start/End: Original strand, 49069080 - 49069163
Alignment:
Q  327 ttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaatcaaaaaagtaaatt 410  Q
    ||||| ||||||| |||||||||| || ||| | |||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  49069080 ttttagattcattcaataattgatatacctaccatagaaatagaccaaatacatcaactattcaatgaattaaaaaagtaaatt 49069163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 305 - 436
Target Start/End: Complemental strand, 11668149 - 11668017
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaaaa 403  Q
    ||||||||||||||| || |||||||| ||||||| | |||||||| || || | |||||| ||||| |||||| || |  ||| |||||||||||||||    
T  11668149 tatttataagaaaaatttgactttttacattcattgattaattgatgtatcttgtctagaatatagatcaaatatatcatttatgcaatgaatcaaaaaa 11668050  T
Q  404 gtaaattgttttttatatataggaccggaggga 436  Q
    || || ||||| ||||| |||||||||||||||    
T  11668049 gtcaaatgtttcttataaataggaccggaggga 11668017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 302 - 432
Target Start/End: Original strand, 41850607 - 41850738
Alignment:
Q  302 tcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaa 400  Q
    ||||||||||||||||||||||| |||||| ||||||| ||||||| || ||  | |  || || ||||| ||||||||| |  ||| ||||||||||||    
T  41850607 tcttatttataagaaaaagttaattttttagattcattgaataattaatgtatttggtataaaatatagagcaaatacatcatttatgcaatgaatcaaa 41850706  T
Q  401 aaagtaaattgttttttatatataggaccgga 432  Q
    |||||||| ||||| ||||| |||||||||||    
T  41850707 aaagtaaaatgtttcttataaataggaccgga 41850738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 305 - 420
Target Start/End: Complemental strand, 8566215 - 8566099
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaaaa 403  Q
    ||||||||||||||| || | |||||| ||||||| | |||||||| || || | |||||| ||||||||||||||| |  ||| |||||||||||||||    
T  8566215 tatttataagaaaaatttgattttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaaaaa 8566116  T
Q  404 gtaaattgttttttata 420  Q
    || || ||||| |||||    
T  8566115 gttaaatgtttcttata 8566099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 296 - 433
Target Start/End: Complemental strand, 2523913 - 2523775
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatga 394  Q
    ||||| || |||||||||||||||||| |||||||| ||||||| | ||||| || ||  | || ||||| |||||||| ||||||    ||| ||||||    
T  2523913 ctccggtcctatttataagaaaaagttgactttttagattcattgagtaattaatgtacttggcatagaatatagaccagatacatcgtttatgcaatga 2523814  T
Q  395 atcaaaaaagtaaattgttttttatatataggaccggag 433  Q
    ||||||||||| || ||||| ||||| ||| ||||||||    
T  2523813 atcaaaaaagtcaaatgtttcttataaataagaccggag 2523775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 302 - 422
Target Start/End: Original strand, 16861523 - 16861642
Alignment:
Q  302 tcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaatcaaaa 401  Q
    |||||| ||||| ||| | || |||||||| ||||||| |||||||||| ||  ||| ||| |||||| ||  ||||||||| |||||||||||||  ||    
T  16861523 tcttatatataaaaaacaattgactttttagattcattgaataattgatgtatatagtctaaaaatagcccggatacattaattattcaatgaatc-caa 16861621  T
Q  402 aagtaaattgttttttatata 422  Q
    |||| |||||||| |||||||    
T  16861622 aagtcaattgtttcttatata 16861642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 375 - 430
Target Start/End: Complemental strand, 16861575 - 16861520
Alignment:
Q  375 atacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccg 430  Q
    |||||| || ||||||||||||| ||||||| |||||||||||||||||| |||||    
T  16861575 atacatcaattattcaatgaatctaaaaagtcaattgttttttatatataagaccg 16861520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 307 - 433
Target Start/End: Complemental strand, 45441568 - 45441441
Alignment:
Q  307 tttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaaaagt 405  Q
    ||||||| ||||| ||||||||||| ||||| | |||||||| | || || | |||||| ||||| ||||||||| | |||| |||| ||||||||||||    
T  45441568 tttataaaaaaaaattaactttttagattcaatgaataattggtgtatcttgtctagaatatagatcaaatacatcatctatacaataaatcaaaaaagt 45441469  T
Q  406 aaattgttttttatatataggaccggag 433  Q
     || | |||  |||| ||||||||||||    
T  45441468 caaatatttcatataaataggaccggag 45441441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 308 - 434
Target Start/End: Original strand, 45533247 - 45533374
Alignment:
Q  308 ttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaaaagta 406  Q
    |||||||||||| || |||||||| |||||||   ||||| || || || | |||||| |||||||||||||||||  ||| |||||||| ||||||||     
T  45533247 ttataagaaaaaattgactttttagattcattatgtaattaatgtatcttgtctagaatatagaccaaatacattatttatacaatgaattaaaaaagtc 45533346  T
Q  407 aattgttttttatatataggaccggagg 434  Q
    || ||||| ||||| ||| ||| |||||    
T  45533347 aaatgtttcttataaataagacaggagg 45533374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 296 - 350
Target Start/End: Original strand, 13807247 - 13807301
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgat 350  Q
    ||||| ||||||||||||||||||||| |||||||| ||||||| | ||||||||    
T  13807247 ctccggtcttatttataagaaaaagttgactttttagattcattgagtaattgat 13807301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 428
Target Start/End: Original strand, 29365701 - 29365759
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggac 428  Q
    |||||||||||||| || |||||||||| ||||||| |||| ||| |||||||||||||    
T  29365701 accaaatacattaattactcaatgaatctaaaaagtcaattttttcttatatataggac 29365759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 305 - 402
Target Start/End: Complemental strand, 30869320 - 30869222
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaaa 402  Q
    ||||||||||||||  || |||||||| ||||||| | |||||||| || || | |||||| |||||||||||||||||  ||| |||| |||||||||    
T  30869320 tatttataagaaaattttgactttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacattatttatacaataaatcaaaaa 30869222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 296 - 436
Target Start/End: Complemental strand, 10007719 - 10007576
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatga 394  Q
    ||||| || |||||||||||||||||| |||||||| |||||||  |||||| || || || |  ||||| ||||||||||||||| |  |||  |||||    
T  10007719 ctccggtcctatttataagaaaaagttgactttttagattcattgtataattaatgtatcttgtgtagaatatagaccaaatacataatttatgaaatga 10007620  T
Q  395 at--caaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||   |||||||| || ||||| ||||| ||||||| |||||||    
T  10007619 ataaaaaaaaagtcaaatgtttattataaataggacaggaggga 10007576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 417
Target Start/End: Complemental strand, 40142845 - 40142794
Alignment:
Q  366 atagaccaaatacattaactattcaatgaatcaaaaaagtaaattgtttttt 417  Q
    |||||||||||||||||  ||| ||||||||||||||||| || ||||||||    
T  40142845 atagaccaaatacattatttatgcaatgaatcaaaaaagtcaaatgtttttt 40142794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 373 - 436
Target Start/End: Complemental strand, 41088917 - 41088854
Alignment:
Q  373 aaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||| ||||||||||||| ||||||| |||||||| || ||   |||||||||||||    
T  41088917 aaatacattaattattcaatgaatctaaaaagtcaattgtttcttgtaataaggaccggaggga 41088854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 375 - 436
Target Start/End: Complemental strand, 24163332 - 24163270
Alignment:
Q  375 atacattaactattcaatgaatcaaaaaagtaaattgtttt-ttatatataggaccggaggga 436  Q
    ||||||||| ||| ||||||||| |||||||||||| ||||  |||| |||||||||||||||    
T  24163332 atacattaattatacaatgaatctaaaaagtaaatttttttcctataaataggaccggaggga 24163270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 416
Target Start/End: Complemental strand, 28936122 - 28936076
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttt 416  Q
    |||||||||||||| |||||||| |||| ||||||| ||||||||||    
T  28936122 accaaatacattaattattcaataaatctaaaaagtcaattgttttt 28936076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 436
Target Start/End: Original strand, 35427739 - 35427805
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||| || |||| |||| ||| |||||||||||||| | || || |||||||||||||||    
T  35427739 accaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggga 35427805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 371 - 436
Target Start/End: Original strand, 2523851 - 2523916
Alignment:
Q  371 ccaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    |||| |||||||| || |||||||||| ||||||| || | ||| ||||| |||||||||||||||    
T  2523851 ccaagtacattaattactcaatgaatctaaaaagtcaactttttcttataaataggaccggaggga 2523916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 436
Target Start/End: Original strand, 10007661 - 10007722
Alignment:
Q  375 atacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||| ||| ||||||||| ||||||| || | ||| ||||| |||||||||||||||    
T  10007661 atacattaattatacaatgaatctaaaaagtcaactttttcttataaataggaccggaggga 10007722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 436
Target Start/End: Original strand, 10462382 - 10462522
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatga 394  Q
    ||||||||||||||||||||||||  | |||||||| ||||||| | | |||||| || || | ||| || ||| ||||||||||| |  ||| ||||||    
T  10462382 ctccgatcttatttataagaaaaatgtgactttttagattcattgagtgattgatgtatcttgtctaaaatatataccaaatacatcatttatgcaatga 10462481  T
Q  395 atcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    || ||||| || || ||||| ||||| |||| || |||||||    
T  10462482 ataaaaaatgtcaa-tgtttcttataaatagaactggaggga 10462522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 414
Target Start/End: Original strand, 29559520 - 29559561
Alignment:
Q  373 aaatacattaactattcaatgaatcaaaaaagtaaattgttt 414  Q
    ||||||||||| ||||||||||||| ||||||| ||||||||    
T  29559520 aaatacattaattattcaatgaatctaaaaagtcaattgttt 29559561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 420
Target Start/End: Complemental strand, 33901101 - 33901056
Alignment:
Q  375 atacattaactattcaatgaatcaaaaaagtaaattgttttttata 420  Q
    ||||||||||||||| ||||||||||||| | |||||||| |||||    
T  33901101 atacattaactattctatgaatcaaaaaaatcaattgtttcttata 33901056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 302 - 339
Target Start/End: Original strand, 48082810 - 48082847
Alignment:
Q  302 tcttatttataagaaaaagttaactttttatattcatt 339  Q
    ||||||||||||||||||||| |||||||| |||||||    
T  48082810 tcttatttataagaaaaagttgactttttagattcatt 48082847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 370 - 434
Target Start/End: Original strand, 5909551 - 5909615
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||||||||||| || |||| |||| ||| |||||||||||||| | || || |||||||||||||    
T  5909551 accaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagg 5909615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 308 - 380
Target Start/End: Complemental strand, 8169223 - 8169151
Alignment:
Q  308 ttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacat 380  Q
    ||||||| |||||||||||||||| ||||||| ||||| |||| ||  ||| ||| | |||||||| ||||||    
T  8169223 ttataagcaaaagttaactttttagattcattcaataaatgatgtatgtagtctatatatagaccacatacat 8169151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 370 - 434
Target Start/End: Original strand, 23248748 - 23248812
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||||||||||| || |||| |||| ||| |||||||||||||| | || || |||||||||||||    
T  23248748 accaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagg 23248812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 369 - 405
Target Start/End: Complemental strand, 35274478 - 35274442
Alignment:
Q  369 gaccaaatacattaactattcaatgaatcaaaaaagt 405  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  35274478 gaccaaatacattaaatattgaatgaatcaaaaaagt 35274442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 48634245 - 48634205
Alignment:
Q  366 atagaccaaatacattaactattcaatgaatcaaaaaagta 406  Q
    |||||||||||||||||  ||||||||||||| ||||||||    
T  48634245 atagaccaaatacattatgtattcaatgaatctaaaaagta 48634205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 101; Significance: 9e-50; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 296 - 436
Target Start/End: Complemental strand, 22731401 - 22731261
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| || |||||||||||||||||||| |||||| ||||||| ||||||| || || |||||||||||||||||||||||||| ||||||||||||||    
T  22731401 ctccggtcctatttataagaaaaagttaattttttagattcattaaataattaatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 22731302  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  22731301 tcaaaaaagtaaattgtttcttatatataggaccggaggga 22731261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 296 - 436
Target Start/End: Complemental strand, 29031179 - 29031039
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| || ||||||||||||||||||||||||||| ||||||| || ||||||| || |||||||||||||||||||||||||| ||||||||||||||    
T  29031179 ctccggtcctatttataagaaaaagttaactttttagattcattcaacaattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 29031080  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||||||| ||||||||| |||||||||||    
T  29031079 tcaaaaaagtaaattgtttcttatatataagaccggaggga 29031039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 296 - 436
Target Start/End: Original strand, 15968316 - 15968456
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| || |||||||||||||||||||| |||||| ||||||| ||||||| || || |||||||||||||||||||||||||| ||||||||||||||    
T  15968316 ctccggtcctatttataagaaaaagttaattttttagattcattcaataattaatgtatctagcctagaaatagaccaaatacatcaactattcaatgaa 15968415  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||||||| |||||||||||||| ||||||    
T  15968416 tcaaaaaagtaaattgtttcttatatataggacctgaggga 15968456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 305 - 436
Target Start/End: Complemental strand, 1015289 - 1015158
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaatcaaaaaag 404  Q
    ||||||||||||||||||||||||||| ||||||| |||||| ||| || ||| | |||||||||||||||||||| |||||||||||||||||||||||    
T  1015289 tatttataagaaaaagttaactttttagattcattcaataatcgatgtacctaacttagaaatagaccaaatacatcaactattcaatgaatcaaaaaag 1015190  T
Q  405 taaattgttttttatatataggaccggaggga 436  Q
    |||||||||| |||||||||||||||||||||    
T  1015189 taaattgtttcttatatataggaccggaggga 1015158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 296 - 433
Target Start/End: Original strand, 27488352 - 27488489
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| || ||||||||||||||| |||| |||||| ||||||| |||||||||| || ||||||||||||||||||||||| || ||||||| ||||||    
T  27488352 ctccggtcctatttataagaaaaaattaattttttagattcattcaataattgatgtatctagcctagaaatagaccaaatatatcaactattgaatgaa 27488451  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggag 433  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  27488452 tcaaaaaagtaaattgtttcttatatataggaccggag 27488489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 296 - 433
Target Start/End: Complemental strand, 1138360 - 1138223
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    |||||||| ||||||||||||||| || | |||||| ||||||| ||||||| || || |||| |||||||||||||||||||||||| |||||||| ||    
T  1138360 ctccgatcatatttataagaaaaaattgattttttaaattcattaaataattaatgtatctagactagaaatagaccaaatacattaattattcaataaa 1138261  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggag 433  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  1138260 tcaaaaaagtaaattgtttcttataaataggaccggag 1138223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 287 - 436
Target Start/End: Original strand, 26327531 - 26327681
Alignment:
Q  287 taatactttctccgatcttatttataagaaaaag-ttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaact 385  Q
    |||||||  ||||| ||||||||||||||||||  ||||||||||| ||||||| |||||||||| || |||  ||| ||||||||||||||||| ||||    
T  26327531 taatactacctccggtcttatttataagaaaaaaattaactttttagattcattcaataattgatgtacctaatctaaaaatagaccaaatacatcaact 26327630  T
Q  386 attcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||| ||||||||||||||||| ||| |||||||||| ||||||||||    
T  26327631 attcaataaatcaaaaaagtaaattctttcttatatatagaaccggaggga 26327681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 305 - 436
Target Start/End: Complemental strand, 13789866 - 13789734
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaa-tagaccaaatacattaactattcaatgaatcaaaaaa 403  Q
    |||||||||||||||||| |||||| | ||||||| ||||||| || ||  | |  |||||  |||||||||||||| |  ||| |||||||||||||||    
T  13789866 tatttataagaaaaagttgacttttcagattcattgaataattaatgtacttggtatagaatgtagaccaaatacatcatttatgcaatgaatcaaaaaa 13789767  T
Q  404 gtaaattgttttttatatataggaccggaggga 436  Q
    ||||| ||||| ||||| |||||||||||||||    
T  13789766 gtaaaatgtttcttataaataggaccggaggga 13789734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 296 - 436
Target Start/End: Original strand, 38394433 - 38394574
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaa-tagaccaaatacattaactattcaatga 394  Q
    |||||||| ||||||||||||||| || |||||||| ||||||| ||||||| || ||  | |  |||||  |||||||||||||| |  ||| ||||||    
T  38394433 ctccgatcctatttataagaaaaaattgactttttagattcattgaataattaatgtacttggtatagaatgtagaccaaatacatcatttatgcaatga 38394532  T
Q  395 atcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    |||||||||||||| ||||| ||||| |||||| || |||||    
T  38394533 atcaaaaaagtaaaatgtttcttataaataggatcgaaggga 38394574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 291 - 436
Target Start/End: Complemental strand, 5002288 - 5002142
Alignment:
Q  291 actttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattc 389  Q
    |||||||||| || ||||||||||||||  || |||||||| ||| ||| | |||||||| || || | ||| || ||||| ||||||||| |  ||| |    
T  5002288 actttctccgctcctatttataagaaaatttttactttttagatttattgagtaattgatgtatcttgtctaaaatatagatcaaatacatcatttatgc 5002189  T
Q  390 aatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||| |||||||||||| || ||||| ||||| |||||||||||||||    
T  5002188 aattaatcaaaaaagtcaaatgtttcttataaataggaccggaggga 5002142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 326 - 436
Target Start/End: Original strand, 33478142 - 33478253
Alignment:
Q  326 tttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatata 424  Q
    |||||| ||||||| | |||||||| || || | |||||| |||| |||||||||| |  ||| |||||||||||||| || || ||||| ||||| |||    
T  33478142 tttttagattcattgagtaattgatgtatctcgtctagaatataggccaaatacatcatttatgcaatgaatcaaaaatgtcaaatgtttcttataaata 33478241  T
Q  425 ggaccggaggga 436  Q
    ||||||||||||    
T  33478242 ggaccggaggga 33478253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 287 - 436
Target Start/End: Original strand, 6338311 - 6338461
Alignment:
Q  287 taatactttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaa-tagaccaaatacattaact 385  Q
    ||||||| | ||||||| |||||||||||  ||||| |||||||| || |||| ||||||  || || |||  | ||||  || ||||||||||| || |    
T  6338311 taatactctttccgatcctatttataagaggaagttgactttttagatacattgaataatgtatgtatctaatcaagaacctaaaccaaatacataaatt 6338410  T
Q  386 attcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||| |||| ||| |||||||||||||| |||| || ||||||| |||||||    
T  6338411 atttaatgtatctaaaaagtaaattgtcttttgtaaataggactggaggga 6338461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 436
Target Start/End: Original strand, 31803038 - 31803104
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||| || |||| |||| ||| |||||||||||||||| || || |||||||||||||||    
T  31803038 accaaatacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggaggga 31803104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 370 - 436
Target Start/End: Complemental strand, 38394496 - 38394430
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||| |||||||| ||||||||||||| ||||||| |||| ||| ||||| |||||| ||||||||    
T  38394496 accaagtacattaattattcaatgaatctaaaaagtcaattttttcttataaataggatcggaggga 38394430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 355 - 420
Target Start/End: Original strand, 11142428 - 11142493
Alignment:
Q  355 ctagcctagaaatagaccaaatacattaactattcaatgaatcaaaaaagtaaattgttttttata 420  Q
    |||| ||||||||||||  ||||||| || ||||||||||||||||||| | |||||||| |||||    
T  11142428 ctagtctagaaatagacttaatacatcaattattcaatgaatcaaaaaaatgaattgtttcttata 11142493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 305 - 429
Target Start/End: Original strand, 18473489 - 18473614
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaaaa 403  Q
    ||||||| ||| ||| || |||||||| ||||||| | |||||||| || || | |||||| ||||| ||||| ||| |  ||| |||||||||||||||    
T  18473489 tatttatgagagaaatttgactttttagattcattgagtaattgatgtatcttgtctagaatatagatcaaatgcatcatttatacaatgaatcaaaaaa 18473588  T
Q  404 gtaaattgttttttatatataggacc 429  Q
    || || ||||| ||||| ||||||||    
T  18473589 gtcaaatgtttcttataaataggacc 18473614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 371 - 436
Target Start/End: Original strand, 36417128 - 36417193
Alignment:
Q  371 ccaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    |||||||||| || |||| |||| ||| |||||||||||||||| ||||| |||||||| ||||||    
T  36417128 ccaaatacataaattatttaatgtatctaaaaagtaaattgtttcttataaataggaccagaggga 36417193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 289 - 436
Target Start/End: Complemental strand, 7945987 - 7945839
Alignment:
Q  289 atactttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaa-tagaccaaatacattaactat 387  Q
    ||||| ||||||||| | |||| |||| |||| | |||||||| || |||| ||||||  || || |||| | ||||  || |||||||| || || |||    
T  7945987 atactctctccgatcctgtttacaagagaaagatcactttttagatacattgaataatgtatgtatctagtcaagaatctaaaccaaatatataaattat 7945888  T
Q  388 tcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    | |||| ||| |||||||||||||||| || || |||||||||||||||    
T  7945887 ttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggaggga 7945839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 436
Target Start/End: Original strand, 18353222 - 18353354
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaaaa 403  Q
    |||||| |||| |||||| | |||||| || |||| ||||||  || || |||| | |||| ||| ||||||||||| || |||| |||| ||| |||||    
T  18353222 tatttacaagagaaagttgattttttacatacattgaataatgtatgtatctagtcaagaacataaaccaaatacataaattatttaatgtatctaaaaa 18353321  T
Q  404 gtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||| || || |||||| ||||||||    
T  18353322 gtaaattgtttcttgtaaataggatcggaggga 18353354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 434
Target Start/End: Complemental strand, 25027762 - 25027698
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||||||||||| || ||||||||| ||| |||||||||||||| | || || |||||||||||||    
T  25027762 accaaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagg 25027698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 436
Target Start/End: Original strand, 904046 - 904112
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||| || |||| |||| ||| |||||||||||||||| || || |||| ||||||||||    
T  904046 accaaatacataaattatttaatgtatctaaaaagtaaattgtttattgtaaatagaaccggaggga 904112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 432
Target Start/End: Complemental strand, 919754 - 919648
Alignment:
Q  327 ttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatatag 425  Q
    ||||| ||||||| | |||||||| || ||||  ||||| ||||||||||||||| |  |||| |||||||||||||||| || | |||  ||||||||     
T  919754 ttttagattcattgagtaattgatgtatctagtatagaatatagaccaaatacatcatttattgaatgaatcaaaaaagtcaaatatttcctatatatat 919655  T
Q  426 gaccgga 432  Q
    |||||||    
T  919654 gaccgga 919648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 434
Target Start/End: Original strand, 15569345 - 15569475
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaaaa 403  Q
    |||||| |||| |||||| |||||||| || |||| ||||||  || || |||  | |||| ||| ||||||||||| || |||| |||| ||| |||||    
T  15569345 tatttacaagagaaagttgactttttagatacattgaataatgtatatatctaatcaagaacataaaccaaatacataaattatttaatgtatctaaaaa 15569444  T
Q  404 gtaaattgttttttatatataggaccggagg 434  Q
    ||||||||| | || || |||||||||||||    
T  15569445 gtaaattgtctcttgtaaataggaccggagg 15569475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 304 - 350
Target Start/End: Complemental strand, 36434813 - 36434767
Alignment:
Q  304 ttatttataagaaaaagttaactttttatattcatttaataattgat 350  Q
    |||||||||||||||| ||||||||||| ||||||| | ||||||||    
T  36434813 ttatttataagaaaaatttaactttttagattcattaagtaattgat 36434767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 432
Target Start/End: Original strand, 37699860 - 37699922
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccgga 432  Q
    ||||||||||| || ||||||||| ||| |||||||||||||| | || || |||||||||||    
T  37699860 accaaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccgga 37699922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 434
Target Start/End: Complemental strand, 41989698 - 41989568
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaa-tagaccaaatacattaactattcaatgaatcaaaaaa 403  Q
    |||||| |||| |||||| |||||||| || |||| ||||||  || || |||| | ||||  || ||||||||||| || |||| |||| ||| |||||    
T  41989698 tatttaaaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatctaaaaa 41989599  T
Q  404 gtaaattgttttttatatataggaccggagg 434  Q
    ||||||||| | || || |||||||||||||    
T  41989598 gtaaattgtctcttgtaaataggaccggagg 41989568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 410
Target Start/End: Complemental strand, 892619 - 892575
Alignment:
Q  366 atagaccaaatacattaactattcaatgaatcaaaaaagtaaatt 410  Q
    ||||| |||||||||||| ||||||||||||| ||||||| ||||    
T  892619 atagaacaaatacattaattattcaatgaatctaaaaagtgaatt 892575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 372 - 436
Target Start/End: Complemental strand, 7053714 - 7053650
Alignment:
Q  372 caaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||| || |||| |||| ||| |||||||||||||| | || || |||||||||||||||    
T  7053714 caaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggga 7053650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 372 - 424
Target Start/End: Complemental strand, 12676175 - 12676123
Alignment:
Q  372 caaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatata 424  Q
    |||||||||||  ||||||||||||| ||||| ||| || |||||||||||||    
T  12676175 caaatacattagttattcaatgaatctaaaaattaattttttttttatatata 12676123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 370 - 434
Target Start/End: Complemental strand, 13144948 - 13144884
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||||||||||| || |||| |||| ||| |||||||||||||| | || || |||||||||||||    
T  13144948 accaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagg 13144884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 315 - 382
Target Start/End: Original strand, 14723410 - 14723478
Alignment:
Q  315 aaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacatta 382  Q
    ||||| ||||||||||| ||||||| | |||||||| || |||  |||||| |||||||||||||||||    
T  14723410 aaaaaattaactttttaaattcattgagtaattgatatatctaatctagaatatagaccaaatacatta 14723478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 369 - 405
Target Start/End: Original strand, 22398120 - 22398156
Alignment:
Q  369 gaccaaatacattaactattcaatgaatcaaaaaagt 405  Q
    ||||||||||||||| ||||||||||||| |||||||    
T  22398120 gaccaaatacattaattattcaatgaatctaaaaagt 22398156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 370 - 434
Target Start/End: Complemental strand, 29374238 - 29374174
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||||||||||| || ||||||||| ||| |||||||||||||| | || || |||||| ||||||    
T  29374238 accaaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggatcggagg 29374174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 9e-50; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 296 - 436
Target Start/End: Original strand, 34662687 - 34662827
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    |||||||  ||||||||| ||||||||||||||||| ||||||| |||||||||| || |||||||||||||||||||||||||| ||||||||||||||    
T  34662687 ctccgattctatttataaaaaaaagttaactttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaa 34662786  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||||||| ||||||||| |||||||||||    
T  34662787 tcaaaaaagtaaattgtttcttatatataagaccggaggga 34662827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 101; E-Value: 9e-50
Query Start/End: Original strand, 296 - 436
Target Start/End: Complemental strand, 43929488 - 43929348
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| || ||||||||||||||||||||||||||| ||||||| |||||||||| || ||||| |||||||||||||||||||| ||||||| ||||||    
T  43929488 ctccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacctagcttagaaatagaccaaatacatcaactatttaatgaa 43929389  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  43929388 tcaaaaaagtaaattgtttcttatatataggaccggaggga 43929348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 296 - 436
Target Start/End: Complemental strand, 47678398 - 47678258
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| || ||||||||||||||| ||||||||| | ||||||| |||||||||| || ||| |||||||||||| ||||||||| ||||||||||||||    
T  47678398 ctccggtcctatttataagaaaaatttaacttttgagattcattcaataattgatgtacctaacctagaaatagatcaaatacatcaactattcaatgaa 47678299  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  47678298 tcaaaaaagtaaattgtttcttatatataggaccggaggga 47678258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 296 - 436
Target Start/End: Original strand, 47844539 - 47844679
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    ||||| || ||||||||||||||| ||||||||| | ||||||| |||||||||| || ||| |||||||||||| |||||| || ||||||||||||||    
T  47844539 ctccggtcctatttataagaaaaatttaacttttgagattcattcaataattgatgtacctaacctagaaatagatcaaatatatcaactattcaatgaa 47844638  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  47844639 tcaaaaaagtaaattgtttcttatatataggatcggaggga 47844679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 305 - 434
Target Start/End: Original strand, 49944847 - 49944977
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaaaa 403  Q
    ||||||||||||||| ||||||||||| ||||||| |||||||||| || || | |||||| ||||||||||||||| |  ||| |||||||||||||||    
T  49944847 tatttataagaaaaatttaactttttagattcattgaataattgatgtatcttgtctagaatatagaccaaatacatcatttatacaatgaatcaaaaaa 49944946  T
Q  404 gtaaattgttttttatatataggaccggagg 434  Q
     | || ||||| || || |||||||||||||    
T  49944947 atcaaatgtttcttgtaaataggaccggagg 49944977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 296 - 433
Target Start/End: Original strand, 26070829 - 26070967
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatga 394  Q
    ||||| |||||||||||||  ||| || |||||||| ||||||| | |||||||| || ||   |||||| |||||||||||||||||  ||| ||||||    
T  26070829 ctccggtcttatttataagtgaaatttgactttttagattcattgagtaattgatgtatcttatctagaatatagaccaaatacattatttatgcaatga 26070928  T
Q  395 atcaaaaaagtaaattgttttttatatataggaccggag 433  Q
    |||||||||||||| ||||| ||||| ||| ||||||||    
T  26070929 atcaaaaaagtaaaatgtttcttataaataagaccggag 26070967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 287 - 436
Target Start/End: Original strand, 26924209 - 26924359
Alignment:
Q  287 taatactttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaact 385  Q
    |||||||  ||||| || |||||||||||||||||| |||||||| ||||||| | | ||| || ||  | |  ||||| ||||||||||||||| |  |    
T  26924209 taatactccctccggtcctatttataagaaaaagttgactttttaaattcattgagtcattaatgtacttggtatagaatatagaccaaatacatcattt 26924308  T
Q  386 attcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    |||||||||||||||||||| || ||||| ||||| |||||||||||||||    
T  26924309 attcaatgaatcaaaaaagtcaaatgtttcttataaataggaccggaggga 26924359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 297 - 436
Target Start/End: Complemental strand, 519975 - 519835
Alignment:
Q  297 tccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaa 395  Q
    ||||||| ||||||||||||||  ||||||||||| ||||||| | |||||||| || ||   |||||| ||||| ||||||||| |  ||| |||| ||    
T  519975 tccgatcctatttataagaaaattttaactttttagattcattgagtaattgatgtatcttatctagaatatagatcaaatacatcatttatacaataaa 519876  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    |||||||||| || ||||| ||||| |||||||||||||||    
T  519875 tcaaaaaagtcaaatgtttattataaataggaccggaggga 519835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 290 - 436
Target Start/End: Complemental strand, 38040425 - 38040278
Alignment:
Q  290 tactttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactatt 388  Q
    ||||| ||||| || ||||||||||||||| || |||||||| ||||||| | |||||||| || || | |||||| ||||| |||||| || |  |||     
T  38040425 tacttcctccggtcctatttataagaaaaatttgactttttagattcattgattaattgatgtatcttgtctagaatatagatcaaatatatcatttatg 38040326  T
Q  389 caatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||||| || ||||| ||||| ||||||||| |||||    
T  38040325 caatgaatcaaaaaagtcaaatgtttcttataaataggaccgaaggga 38040278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 289 - 434
Target Start/End: Complemental strand, 44939216 - 44939070
Alignment:
Q  289 atactttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactat 387  Q
    |||||| || ||||| ||||||||||| ||| || | |||||| ||||||| | |||||||| || |||  |||||| ||||||||||||||| |  |||    
T  44939216 atacttccttcgatcatatttataagagaaaattgattttttagattcattgagtaattgatgtatctaatctagaatatagaccaaatacatcatttat 44939117  T
Q  388 tcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
     |||||||| |||||||| || ||||| ||||| |||||||||||||    
T  44939116 acaatgaataaaaaaagtcaaatgtttcttataaataggaccggagg 44939070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 296 - 435
Target Start/End: Original strand, 34332481 - 34332621
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatga 394  Q
    |||| ||||||| ||||||||||  || |||||||| ||||||| | |||||||| ||  | | |||||| ||||||||||||||| |  ||| ||||||    
T  34332481 ctccaatcttatatataagaaaactttgactttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcatttatccaatga 34332580  T
Q  395 atcaaaaaagtaaattgttttttatatataggaccggaggg 435  Q
    ||||||||||| || ||||| ||||| |||||||| |||||    
T  34332581 atcaaaaaagtcaaatgtttcttataaataggaccagaggg 34332621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 305 - 427
Target Start/End: Complemental strand, 38738065 - 38737942
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaaaa 403  Q
    ||||||||||||||| ||||||||||| ||||||| | |||||||| || || | |||||| ||| |||||||||||    ||| |||||||||||||||    
T  38738065 tatttataagaaaaatttaactttttagattcattgagtaattgatgtatcttgtctagaatataaaccaaatacatcctttatgcaatgaatcaaaaaa 38737966  T
Q  404 gtaaattgttttttatatatagga 427  Q
    || || ||||| ||||| ||||||    
T  38737965 gtcaaatgtttcttataaatagga 38737942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 305 - 434
Target Start/End: Complemental strand, 38590202 - 38590070
Alignment:
Q  305 tatttataagaaaaag--ttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaa 401  Q
    |||||||||||||||   ||||||||||| ||||||| | |||||||| || || |  ||||| |||||||||||||||||  |||  ||||||||||||    
T  38590202 tatttataagaaaaaaaattaactttttagattcattgagtaattgatgtatctggtatagaatatagaccaaatacattatttatgaaatgaatcaaaa 38590103  T
Q  402 aagtaaattgttttttatatataggaccggagg 434  Q
    |||| || || || |||||||||| ||||||||    
T  38590102 aagtcaaatgcttcttatatatagaaccggagg 38590070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 290 - 425
Target Start/End: Complemental strand, 26545146 - 26545010
Alignment:
Q  290 tactttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaat-agaccaaatacattaactatt 388  Q
    ||||| ||||| ||||||||| |||| |||||| |||||||| || |||| ||||||  || || |||| | |||| | | ||||||||||| || ||||    
T  26545146 tacttcctccggtcttatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacttaaaccaaatacataaattatt 26545047  T
Q  389 caatgaatcaaaaaagtaaattgttttttatatatag 425  Q
     |||||||| |||||||||||||| ||||||| ||||    
T  26545046 taatgaatctaaaaagtaaattgtattttataaatag 26545010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 302 - 350
Target Start/End: Original strand, 45848950 - 45848998
Alignment:
Q  302 tcttatttataagaaaaagttaactttttatattcatttaataattgat 350  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||    
T  45848950 tcttatttataagaaacaattaactttttatattcatttaataattgat 45848998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 366 - 436
Target Start/End: Complemental strand, 26760245 - 26760175
Alignment:
Q  366 atagaccaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||| |  ||||||||||||||||||||| || ||||| ||||| |||||||| ||||||    
T  26760245 atagaccaaatacatcatttattcaatgaatcaaaaaagtcaaatgtttcttataaataggacccgaggga 26760175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 288 - 403
Target Start/End: Complemental strand, 50155449 - 50155333
Alignment:
Q  288 aatactttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaacta 386  Q
    ||||||| ||||| || |||||||||||||||||| |||||||| ||||||| | |||||||| ||  | | ||| || ||||||||||||||| |  ||    
T  50155449 aatacttcctccggtcctatttataagaaaaagttgactttttagattcattgagtaattgatgtatttggtctataatatagaccaaatacatcattta 50155350  T
Q  387 ttcaatgaatcaaaaaa 403  Q
    | |||||||| ||||||    
T  50155349 tgcaatgaattaaaaaa 50155333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 296 - 434
Target Start/End: Original strand, 9301924 - 9302063
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaa-tagaccaaatacattaactattcaatga 394  Q
    ||||| || |||||| |||| | ||||||||||||| || |||| ||||||  || || |||| | ||||  || ||||||||||| || |||| ||||     
T  9301924 ctccggtcctatttacaagagacagttaactttttagatacattaaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgt 9302023  T
Q  395 atcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||| |||||||||||||| | ||||| |||||||||||||    
T  9302024 atctaaaaagtaaattgtctcttataaataggaccggagg 9302063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 302 - 347
Target Start/End: Original strand, 6793605 - 6793650
Alignment:
Q  302 tcttatttataagaaaaagttaactttttatattcatttaataatt 347  Q
    ||||||||||||||||||||||| |||||| ||||||| |||||||    
T  6793605 tcttatttataagaaaaagttaattttttaaattcattgaataatt 6793650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 375 - 436
Target Start/End: Complemental strand, 51590493 - 51590432
Alignment:
Q  375 atacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||| ||||| ||||| ||||||||| ||||||||||||||   |||||||||||||    
T  51590493 atacattaattattctatgaaccaaaaaagtcaattgttttttataataaggaccggaggga 51590432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 434
Target Start/End: Complemental strand, 14281658 - 14281594
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||||||||||| || ||||||||| ||| |||||||||||||| | || || |||||||||||||    
T  14281658 accaaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagg 14281594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 290 - 433
Target Start/End: Complemental strand, 29256747 - 29256606
Alignment:
Q  290 tactttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattc 389  Q
    ||||| ||||| || |||||||||||||||||| |||||||| ||||||| | ||||| || |   | |  || ||  ||||||||||||| |  ||| |    
T  29256747 tacttcctccggtcctatttataagaaaaagttgactttttagattcattgagtaattaatgtttttggtataaaataagaccaaatacatcatttatgc 29256648  T
Q  390 aatgaatcaaaaaagtaaattgttttttatatataggaccggag 433  Q
    ||||||||||||||  ||| ||||| ||||| ||||||||||||    
T  29256647 aatgaatcaaaaaa--aaaatgtttcttataaataggaccggag 29256606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 427
Target Start/End: Original strand, 34146881 - 34146941
Alignment:
Q  367 tagaccaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatatagga 427  Q
    |||| |||||||||||| ||||||||||||||||||| | |||| ||| ||||| ||||||    
T  34146881 tagatcaaatacattaattattcaatgaatcaaaaaaatcaattttttcttataaatagga 34146941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 434
Target Start/End: Complemental strand, 38830551 - 38830487
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||||||||||| || ||||||||| ||| |||||||||||||| | || || |||||||||||||    
T  38830551 accaaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagg 38830487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 434
Target Start/End: Original strand, 50155374 - 50155442
Alignment:
Q  366 atagaccaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||||||||||||||| || || |||||||||| ||||||| || | ||| ||||| |||||||||||||    
T  50155374 atagaccaaatacatcaattactcaatgaatctaaaaagtcaactttttcttataaataggaccggagg 50155442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 369 - 436
Target Start/End: Original strand, 47911924 - 47911991
Alignment:
Q  369 gaccaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||| |||| |||||||||||||||| | || ||  ||||| ||| |||||||||||    
T  47911924 gaccaaatacattaaatattgaatgaatcaaaaaagtgattttttgcttataaatatgaccggaggga 47911991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 367 - 434
Target Start/End: Complemental strand, 49184310 - 49184243
Alignment:
Q  367 tagaccaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    |||| |||||||||||| |||| |||||||  ||||| |||||| ||||||||| ||||||| |||||    
T  49184310 tagatcaaatacattaattattaaatgaatttaaaaaataaattattttttataaataggactggagg 49184243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 372 - 434
Target Start/End: Complemental strand, 9548738 - 9548676
Alignment:
Q  372 caaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||||||||| || |||| |||| ||| |||||||||||||||| || || |||||||||||||    
T  9548738 caaatacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccggagg 9548676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 372 - 434
Target Start/End: Original strand, 10065337 - 10065399
Alignment:
Q  372 caaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||||||||| || |||| |||| ||| ||||||||||||||||||| || |||||| ||||||    
T  10065337 caaatacataaattatttaatgtatctaaaaagtaaattgttttttgtaaataggatcggagg 10065399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 366 - 408
Target Start/End: Original strand, 10506290 - 10506332
Alignment:
Q  366 atagaccaaatacattaactattcaatgaatcaaaaaagtaaa 408  Q
    |||||| |||||||| |||||||||||||||| ||||||||||    
T  10506290 atagacaaaatacatcaactattcaatgaatctaaaaagtaaa 10506332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 308 - 441
Target Start/End: Original strand, 18744576 - 18744706
Alignment:
Q  308 ttataagaaaaagttaactttttatattcatttaataattg-atttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaaaagt 405  Q
    ||||||||||||||| |||||||| ||||||| |||||||| |||| |     |||||| ||||||| ||||||| |  ||| |||||||| ||||||||    
T  18744576 ttataagaaaaagttgactttttagattcattgaataattgtatttga----tctagaatatagacc-aatacatcatttatgcaatgaataaaaaaagt 18744670  T
Q  406 aaattgttttttatatataggaccggagggactacc 441  Q
     || ||||| || || ||||||||||||||| ||||    
T  18744671 taaatgtttcttttaaataggaccggagggagtacc 18744706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 305 - 430
Target Start/End: Original strand, 23923564 - 23923690
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaaaa 403  Q
    ||||||||||||||| || | |||||| ||||||| | ||||| || ||  | | |||||| ||||||||||| ||| |  ||| |||||||||| ||||    
T  23923564 tatttataagaaaaatttgaatttttagattcattgagtaattaatgtatattgtctagaatatagaccaaatgcatcatttatgcaatgaatcagaaaa 23923663  T
Q  404 gtaaattgttttttatatataggaccg 430  Q
    ||||||| ||| ||||| ||| |||||    
T  23923664 gtaaattttttcttataaataagaccg 23923690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 432
Target Start/End: Original strand, 28359151 - 28359213
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccgga 432  Q
    ||||||||||| || |||| |||| ||| |||||||||||||||| || || |||||||||||    
T  28359151 accaaatacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccgga 28359213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 436
Target Start/End: Complemental strand, 28989340 - 28989274
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||| || |||| |||| ||| |||||||||||||||| || || ||||||||| |||||    
T  28989340 accaaatacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggaccgaaggga 28989274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 338
Target Start/End: Original strand, 640520 - 640569
Alignment:
Q  289 atactttctccgatcttatttataagaaaaagttaactttttatattcat 338  Q
    ||||| |||||||| |||||||||||||||| || |||||||| ||||||    
T  640520 atactctctccgattttatttataagaaaaaattgactttttagattcat 640569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 350
Target Start/End: Original strand, 26823143 - 26823196
Alignment:
Q  297 tccgatcttatttataagaaaaagttaactttttatattcatttaataattgat 350  Q
    ||||||| ||||||||| ||||| ||||||||||| ||| ||| ||||||||||    
T  26823143 tccgatcctatttataataaaaaattaactttttaaatttattgaataattgat 26823196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 367 - 432
Target Start/End: Original strand, 28358999 - 28359064
Alignment:
Q  367 tagaccaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccgga 432  Q
    ||||||||||||||||| ||||||||||||  ||||| | | || ||| ||||| |||||||||||    
T  28358999 tagaccaaatacattaattattcaatgaatttaaaaattcatttttttcttataaataggaccgga 28359064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 369 - 405
Target Start/End: Complemental strand, 457638 - 457602
Alignment:
Q  369 gaccaaatacattaactattcaatgaatcaaaaaagt 405  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  457638 gaccaaatacattaaatattgaatgaatcaaaaaagt 457602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 296 - 430
Target Start/End: Original strand, 11386159 - 11386294
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaacttttt-atattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatg 393  Q
    ||||| |||| ||||||||||||| || | ||||| | ||||||| |||||||||| |  || | |||||| |||||| |||||||| |  ||| |||||    
T  11386159 ctccggtcttttttataagaaaaaattgatttttttagattcattgaataattgatgtttctggtctagaatatagacgaaatacatcatttatgcaatg 11386258  T
Q  394 aatcaaaaaagtaaattgttttttatatataggaccg 430  Q
    |||| ||||||| || ||||| ||||| |||||||||    
T  11386259 aatc-aaaaagtcaaatgtttcttataaataggaccg 11386294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 370 - 434
Target Start/End: Complemental strand, 23398148 - 23398084
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||||||||||| || ||||||||| ||| ||||||||| |||| | || || |||||||||||||    
T  23398148 accaaatacataaattattcaatgtatctaaaaagtaagttgtctcttgtaaataggaccggagg 23398084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 370 - 434
Target Start/End: Original strand, 29256678 - 29256742
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    |||||| ||||||| || |||||||||| ||||||| || | ||| ||||| |||||||||||||    
T  29256678 accaaaaacattaattactcaatgaatctaaaaagtcaactttttcttataaataggaccggagg 29256742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 305 - 345
Target Start/End: Complemental strand, 29853293 - 29853253
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataa 345  Q
    |||||||||| |||| |||||||||||| ||||||||||||    
T  29853293 tatttataagtaaaaattaactttttatgttcatttaataa 29853253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 369 - 405
Target Start/End: Original strand, 30412671 - 30412707
Alignment:
Q  369 gaccaaatacattaactattcaatgaatcaaaaaagt 405  Q
    ||||||||||||||| |||| ||||||||||||||||    
T  30412671 gaccaaatacattaaatattgaatgaatcaaaaaagt 30412707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 297 - 345
Target Start/End: Original strand, 39498770 - 39498818
Alignment:
Q  297 tccgatcttatttataagaaaaagttaactttttatattcatttaataa 345  Q
    ||||||| |||||||||| ||||   |||||||||||||||||||||||    
T  39498770 tccgatcatatttataagcaaaacaaaactttttatattcatttaataa 39498818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 1e-45; HSPs: 37)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 305 - 434
Target Start/End: Complemental strand, 29457973 - 29457844
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaatcaaaaaag 404  Q
    ||||||||||||||||||||||||||| ||||||| ||| |||||| || |||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  29457973 tatttataagaaaaagttaactttttagattcattcaatgattgatgtacctagtctagaaatagaccaaatacatcaactattcaatgaatcaaaaaag 29457874  T
Q  405 taaattgttttttatatataggaccggagg 434  Q
    |||||||||| ||||||||||||| |||||    
T  29457873 taaattgtttcttatatataggactggagg 29457844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 296 - 433
Target Start/End: Original strand, 33371866 - 33372003
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    |||||||| |||||||||||||||||||| |||||| ||| ||| |||||||||| || |||||||| ||||||||||||||||| ||||||||||||||    
T  33371866 ctccgatcatatttataagaaaaagttaattttttaaatttattcaataattgatgtacctagcctaaaaatagaccaaatacatcaactattcaatgaa 33371965  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggag 433  Q
    |||||||| |||||| ||| ||||||||||||||||||    
T  33371966 tcaaaaaaataaattatttcttatatataggaccggag 33372003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 296 - 436
Target Start/End: Original strand, 49885384 - 49885524
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    |||||||  ||||||||||||||| |||| |||||| ||||||| |||||||||| || |||| ||||||||||||||||||||| || ||| || | ||    
T  49885384 ctccgattctatttataagaaaaaattaattttttagattcattcaataattgatgtatctagtctagaaatagaccaaatacatcaattatccacttaa 49885483  T
Q  396 tcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||||||||||| |||||||||| | ||||||||    
T  49885484 tcaaaaaagtaaattgtttcttatatatagtatcggaggga 49885524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 315 - 429
Target Start/End: Complemental strand, 54087521 - 54087407
Alignment:
Q  315 aaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaatcaaaaaagtaaattgttt 414  Q
    ||||||||||| ||||| ||||||| ||||||| || || ||| | ||||||||||| |||||||| |||||||||||||||||||||||||||||||||    
T  54087521 aaaaagttaacattttaaattcattcaataattaatgtacctaacgtagaaatagacaaaatacatcaactattcaatgaatcaaaaaagtaaattgttt 54087422  T
Q  415 tttatatataggacc 429  Q
     ||||||||| ||||    
T  54087421 cttatatataagacc 54087407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 296 - 387
Target Start/End: Complemental strand, 5177908 - 5177817
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactat 387  Q
    ||||| || ||||||||||||||| ||||||||||| ||||||| |||||||||| || ||| | |||||||||||||||||||| ||||||    
T  5177908 ctccggtcctatttataagaaaaaattaactttttagattcattcaataattgatgtacctaacttagaaatagaccaaatacatcaactat 5177817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 296 - 436
Target Start/End: Complemental strand, 53442050 - 53441909
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaa-tagaccaaatacattaactattcaatga 394  Q
    ||||| || |||||||||||||||||| |||||||| ||||||| ||||||| || ||  | |  |||||  || ||||||||||| |  ||| ||||||    
T  53442050 ctccggtcctatttataagaaaaagttgactttttaaattcattgaataattaatgtacttggtatagaatgtataccaaatacatcatttatgcaatga 53441951  T
Q  395 atcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    |||||||||||||| ||||| ||||| |||||||||||||||    
T  53441950 atcaaaaaagtaaaatgtttcttataaataggaccggaggga 53441909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 296 - 436
Target Start/End: Complemental strand, 28406610 - 28406469
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatga 394  Q
    ||||| || |||||| |||||| | || ||||||||  |||||| ||||||| || || |  | |||||| |||||||||||||||||| ||||||| ||    
T  28406610 ctccggtcctatttacaagaaacaattgactttttaggttcattgaataatttatgtacccggtctagaatatagaccaaatacattaattattcaacga 28406511  T
Q  395 atcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||| ||||||| |||||||| || || |||||||||||||||    
T  28406510 atctaaaaagtcaattgtttcttgtaaataggaccggaggga 28406469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 307 - 436
Target Start/End: Complemental strand, 12065041 - 12064911
Alignment:
Q  307 tttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaaaagt 405  Q
    ||||||||||||| || |||||||| ||||||| | ||||| || ||  |||  ||||| ||||||||||||||| |   || |||||||||||||||||    
T  12065041 tttataagaaaaaattgactttttaaattcattaagtaattaatatatttagtatagaatatagaccaaatacatcattaatgcaatgaatcaaaaaagt 12064942  T
Q  406 aaattgttttttatatataggaccggaggga 436  Q
    ||| ||||| |||||  ||||||||||||||    
T  12064941 aaaatgtttcttataagtaggaccggaggga 12064911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 287 - 436
Target Start/End: Original strand, 21662882 - 21663032
Alignment:
Q  287 taatactttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaact 385  Q
    |||||||  ||||| || |||||||||||||||||| |||||||| ||||||| | ||||| || ||  | |  ||||  ||||||||||||||| |  |    
T  21662882 taatactccctccggtcctatttataagaaaaagttgactttttagattcattgagtaattaatgtacttggtatagattatagaccaaatacatcattt 21662981  T
Q  386 attcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    || ||||||||||||||||| || ||||| ||||| ||| |||||||||||    
T  21662982 atgcaatgaatcaaaaaagttaaatgtttcttataaataagaccggaggga 21663032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 299 - 436
Target Start/End: Original strand, 54537451 - 54537589
Alignment:
Q  299 cgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatc 397  Q
    ||||| ||||||||||||||| || |||||| | ||||||| | |||||||| || |||| |||||| ||||| ||||||||  |  ||| |||||||||    
T  54537451 cgatcctatttataagaaaaatttgacttttaagattcattgagtaattgatgtatctagtctagaatatagatcaaatacacaatttatgcaatgaatc 54537550  T
Q  398 aaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    |||||||| |||  ||| ||||| ||||||||| |||||    
T  54537551 aaaaaagtcaataatttcttataaataggaccgaaggga 54537589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 324 - 436
Target Start/End: Original strand, 48593175 - 48593288
Alignment:
Q  324 actttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatata 422  Q
    |||||||| || |||| |||||||||| || |  | |||||| ||||||||||||||| || ||||||||||||| ||||| | | |||||| || ||||    
T  48593175 actttttagatacattgaataattgatgtatcgggtctagaatatagaccaaatacataaattattcaatgaatctaaaaaattacttgtttcttgtata 48593274  T
Q  423 taggaccggaggga 436  Q
    ||||||||||||||    
T  48593275 taggaccggaggga 48593288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 300 - 433
Target Start/End: Original strand, 335384 - 335518
Alignment:
Q  300 gatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaa-tagaccaaatacattaactattcaatgaatca 398  Q
    |||| |||||| |||| |||||| |||||||| || |||| ||||||  || || |||| | ||||  || ||||||||||| || |||| |||| |||     
T  335384 gatcctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgtatct 335483  T
Q  399 aaaaagtaaattgttttttatatataggaccggag 433  Q
    ||||||||||||||||||| || ||||||||||||    
T  335484 aaaaagtaaattgttttttgtaaataggaccggag 335518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 370 - 436
Target Start/End: Original strand, 19202330 - 19202396
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||| || |||| |||| ||| ||||||||||||||||||| || |||||||||||||||    
T  19202330 accaaatacataaattatttaatgtatctaaaaagtaaattgttttttgtaaataggaccggaggga 19202396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 296 - 436
Target Start/End: Original strand, 51516963 - 51517103
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatga 394  Q
    ||||| || |||||||||||||||||| |||||||| ||| ||  | ||||| || ||  | || ||||| ||||||||||||||| |  ||| ||||||    
T  51516963 ctccggtcctatttataagaaaaagttgactttttagatt-atggagtaattaatgtacttggcatagaatatagaccaaatacatcatttatgcaatga 51517061  T
Q  395 atcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    | ||||||||| || ||||| ||||| |||||||||||||||    
T  51517062 accaaaaaagtcaaatgtttcttataaataggaccggaggga 51517103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 436
Target Start/End: Original strand, 8266305 - 8266377
Alignment:
Q  364 aaatagaccaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||| |||||| ||||||  ||| ||||||||||||||||| || ||||| ||||| |||||||||||||||    
T  8266305 aaatataccaaacacattatttatacaatgaatcaaaaaagtcaaatgtttcttataaataggaccggaggga 8266377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 373 - 436
Target Start/End: Original strand, 42225645 - 42225708
Alignment:
Q  373 aaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    |||||||| || |||| |||| ||||||||||||||||||||||| || ||| |||||||||||    
T  42225645 aaatacataaattatttaatgtatcaaaaaagtaaattgttttttgtaaataagaccggaggga 42225708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 296 - 436
Target Start/End: Complemental strand, 21663029 - 21662888
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaa-tagaccaaatacattaactattcaatga 394  Q
    ||||| |||||||||||||||| | ||||||||||  |||||||  |||| |||| ||  | | ||| ||  || ||||| |||||||| || |||||||    
T  21663029 ctccggtcttatttataagaaacatttaacttttttgattcattgcataaatgatgtatttggtctataatctataccaagtacattaattactcaatga 21662930  T
Q  395 atcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||| ||||||| || | ||| ||||| |||||||||||||||    
T  21662929 atctaaaaagtcaactttttcttataaataggaccggaggga 21662888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 434
Target Start/End: Original strand, 6086981 - 6087045
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||||||||||| || ||||||||| ||| |||||||||||||| | || || |||||||||||||    
T  6086981 accaaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagg 6087045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 434
Target Start/End: Original strand, 8243762 - 8243826
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||||||||||| || ||||||||| ||| |||||||||||||| | || || |||||||||||||    
T  8243762 accaaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagg 8243826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 434
Target Start/End: Original strand, 9440208 - 9440272
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||||||||||| || ||||||||| ||| |||||||||||||| | || || |||||||||||||    
T  9440208 accaaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagg 9440272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 370 - 434
Target Start/End: Complemental strand, 10049736 - 10049672
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||||||||||| || ||||||||| ||| |||||||||||||| | || || |||||||||||||    
T  10049736 accaaatacataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagg 10049672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 287 - 339
Target Start/End: Original strand, 40460341 - 40460393
Alignment:
Q  287 taatactttctccgatcttatttataagaaaaagttaactttttatattcatt 339  Q
    ||||||||  |||| |||||||||||||||||| ||||||||||| |||||||    
T  40460341 taatacttcatccggtcttatttataagaaaaaattaactttttagattcatt 40460393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 289 - 428
Target Start/End: Complemental strand, 45010900 - 45010760
Alignment:
Q  289 atactttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactat 387  Q
    ||||| |||||| || ||||||||||| ||| |||| |||||| ||| ||| |||||||||| || ||||  ||||| |||||||| | |||| |  |||    
T  45010900 atactctctccggtcctatttataagagaaaattaattttttagatttattgaataattgatgtatctagtttagaatatagaccacaaacatcatttat 45010801  T
Q  388 tcaatgaatcaaaaaagtaaattgttttttatatataggac 428  Q
     |||| |||||||||||| || | ||| ||||| |||||||    
T  45010800 acaataaatcaaaaaagtcaaatatttcttataaataggac 45010760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 290 - 436
Target Start/End: Original strand, 25113348 - 25113495
Alignment:
Q  290 tactttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaa-tagaccaaatacattaactatt 388  Q
    ||||| ||||| || ||||||||||| |||||| |||||||| || |||| ||||||  || ||  ||  | ||||  || ||||||||||| || ||||    
T  25113348 tacttcctccggtcctatttataagagaaagttgactttttagatacattgaataatgtatgtatttaatcaagaacctaaaccaaatacataaattatt 25113447  T
Q  389 caatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
     |||| ||| |||||||||||||| | || || |||||||||||||||    
T  25113448 taatgtatcgaaaaagtaaattgtctcttgtaaataggaccggaggga 25113495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 436
Target Start/End: Complemental strand, 14768166 - 14768100
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||| || |||| |||| ||| |||||||||||||| | || || |||||||||||||||    
T  14768166 accaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggga 14768100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 432
Target Start/End: Original strand, 18765338 - 18765400
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccgga 432  Q
    ||||||||||| || |||| |||| ||| |||||||||||||||| || || |||||||||||    
T  18765338 accaaatacataaattatttaatgcatctaaaaagtaaattgtttcttgtaaataggaccgga 18765400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 436
Target Start/End: Complemental strand, 28945724 - 28945658
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||| || |||| |||| ||| |||||||||||||| | || || |||||||||||||||    
T  28945724 accaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggga 28945658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 436
Target Start/End: Complemental strand, 49123012 - 49122946
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||| || |||| |||| ||| |||||||||||||| | || || |||||||||||||||    
T  49123012 accaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggga 49122946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 436
Target Start/End: Original strand, 53441987 - 53442053
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||| |||||||| ||||||||||||  ||||||| || | ||| ||||| |||||||||||||||    
T  53441987 accaagtacattaattattcaatgaatttaaaaagtcaactttttcttataaataggaccggaggga 53442053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 300 - 436
Target Start/End: Original strand, 43448967 - 43449104
Alignment:
Q  300 gatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagccta-gaaatagaccaaatacattaactattcaatgaatca 398  Q
    |||| |||||||||||||||||| | |||||| ||||||| | |||||||| || || | ||| || ||| ||||||||||| |  ||| ||||||| ||    
T  43448967 gatcctatttataagaaaaagttgattttttagattcattgagtaattgatatatcttgtctatgatataaaccaaatacatcatttatacaatgaacca 43449066  T
Q  399 aaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||| | || | ||| ||||| |||||| || |||||    
T  43449067 aaaaaatcaaatatttcttataaataggatcgaaggga 43449104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 289 - 405
Target Start/End: Original strand, 44518034 - 44518151
Alignment:
Q  289 atactttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactat 387  Q
    ||||| ||| ||||| ||||||||||||||  || |||||||| ||||||| | ||||| || || || | ||| || ||||||||||||||| |  ||     
T  44518034 atactctcttcgatcctatttataagaaaactttgactttttagattcattgagtaattaatgtatcttgtctaaaatatagaccaaatacatcatttag 44518133  T
Q  388 tcaatgaatcaaaaaagt 405  Q
     |||||||||||||||||    
T  44518134 acaatgaatcaaaaaagt 44518151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 414
Target Start/End: Original strand, 48643687 - 48643728
Alignment:
Q  373 aaatacattaactattcaatgaatcaaaaaagtaaattgttt 414  Q
    ||||||||||| ||||||||||||| ||||||| ||||||||    
T  48643687 aaatacattaattattcaatgaatctaaaaagtcaattgttt 48643728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 436
Target Start/End: Complemental strand, 53703793 - 53703732
Alignment:
Q  375 atacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||| ||||| ||||| ||||||||| |||||||| |||||   |||||||||||||    
T  53703793 atacattaattattctatgaaccaaaaaagtcaattgtttcttataataaggaccggaggga 53703732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 366 - 414
Target Start/End: Complemental strand, 19649651 - 19649603
Alignment:
Q  366 atagaccaaatacattaactattcaatgaatcaaaaaagtaaattgttt 414  Q
    |||||| |||||||| || ||||||||||||||||||||| || |||||    
T  19649651 atagactaaatacatcaattattcaatgaatcaaaaaagtcaaatgttt 19649603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 370 - 434
Target Start/End: Complemental strand, 26999089 - 26999025
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||||||||||| || |||| |||| ||| |||||||||||||| | || || |||||||||||||    
T  26999089 accaaatacataaattatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagg 26999025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 376 - 436
Target Start/End: Original strand, 28406553 - 28406613
Alignment:
Q  376 tacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||| || ||||||||||| | ||||||| |||||||| || || |||||||||||||||    
T  28406553 tacataaattattcaatgaacctaaaaagtcaattgtttcttgtaaataggaccggaggga 28406613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 372 - 436
Target Start/End: Original strand, 40214982 - 40215046
Alignment:
Q  372 caaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||| || |||| |||| ||| ||||||||| |||| | ||||| |||||||||||||||    
T  40214982 caaatacataaattatttaatgtatctaaaaagtaacttgtctcttataaataggaccggaggga 40215046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 2e-41; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 287 - 433
Target Start/End: Complemental strand, 8646830 - 8646684
Alignment:
Q  287 taatactttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaacta 386  Q
    |||||||  |||||||| ||||||||||||||||||| ||||||| ||| |||||||||||||| || ||| | |||||||||||||||| ||| |||||    
T  8646830 taatactccctccgatcctatttataagaaaaagttatctttttagatttatttaataattgatgtacctaacttagaaatagaccaaatgcatcaacta 8646731  T
Q  387 ttcaatgaatcaaaaaagtaaattgttttttatatataggaccggag 433  Q
    |||||||||||||||||||||||| ||| |||||||||| |||||||    
T  8646730 ttcaatgaatcaaaaaagtaaattatttcttatatatagaaccggag 8646684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 305 - 436
Target Start/End: Original strand, 2810093 - 2810224
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaatcaaaaaag 404  Q
    ||||||||| |||||||||| |||||| ||||||| |||||||||| || |||| |||||||||| |||||||||| ||||||||||||||| |||||||    
T  2810093 tatttataaaaaaaagttaattttttagattcattcaataattgatgtacctagtctagaaatagtccaaatacatcaactattcaatgaatgaaaaaag 2810192  T
Q  405 taaattgttttttatatataggaccggaggga 436  Q
    |||||| ||| |||||||||||||||||||||    
T  2810193 taaattatttcttatatataggaccggaggga 2810224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 296 - 420
Target Start/End: Complemental strand, 1837102 - 1836978
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaa 395  Q
    |||||| | |||||||||||||||||||| |||||| ||| ||| |||||||||| || |||||||||||||||||||||||||| || |||||||| ||    
T  1837102 ctccgaccctatttataagaaaaagttaattttttagatttattcaataattgatgtacctagcctagaaatagaccaaatacatcaattattcaattaa 1837003  T
Q  396 tcaaaaaagtaaattgttttttata 420  Q
    ||||||||||||||||||| |||||    
T  1837002 tcaaaaaagtaaattgtttcttata 1836978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 363 - 436
Target Start/End: Original strand, 2943315 - 2943388
Alignment:
Q  363 gaaatagaccaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    |||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  2943315 gaaatagaccaaatacatcaactatttaatgaatcaaaaaagtaaattgtttcttatatataggaccggaggga 2943388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 305 - 428
Target Start/End: Original strand, 28630767 - 28630891
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaaaa 403  Q
    ||||||||||||||| || ||||||| |||||||| | |||||||| || || | ||| || ||||||||||||||| |  ||| ||||||||| |||||    
T  28630767 tatttataagaaaaatttgactttttttattcattgagtaattgatgtatcttgtctataatatagaccaaatacataatttatgcaatgaatctaaaaa 28630866  T
Q  404 gtaaattgttttttatatataggac 428  Q
    || |||||||| ||||| |||||||    
T  28630867 gtcaattgtttcttataaataggac 28630891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 305 - 436
Target Start/End: Original strand, 3064897 - 3065029
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaaaa 403  Q
    ||||||||||||||| ||| ||||||| |||||||  |||||| || || || |  || || ||||||||||||||  |  ||| |||||||||||||||    
T  3064897 tatttataagaaaaaattatctttttagattcattgtataattaatgtatcttgtataaaatatagaccaaatacaccatttatgcaatgaatcaaaaaa 3064996  T
Q  404 gtaaattgttttttatatataggaccggaggga 436  Q
    ||||| | ||| ||||| |||||||||||||||    
T  3064997 gtaaaatatttcttataaataggaccggaggga 3065029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 296 - 430
Target Start/End: Original strand, 30627828 - 30627963
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatga 394  Q
    ||||| |||||||||||||||||| || | |||||||||| ||| | |||||||| || || | ||| || ||||||||||||||| |  ||| ||||||    
T  30627828 ctccggtcttatttataagaaaaatttgattttttatatttattgagtaattgatgtatcttgtctaaaatatagaccaaatacatcatttatgcaatga 30627927  T
Q  395 atcaaaaaagtaaattgttttttatatataggaccg 430  Q
    |||| |||||| || ||||| ||||| |||| ||||    
T  30627928 atcagaaaagtcaaatgtttcttataaatagaaccg 30627963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 286 - 436
Target Start/End: Original strand, 24949626 - 24949777
Alignment:
Q  286 ataatactttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaac 384  Q
    ||||||||  ||||| || |||||| |||| ||| || |||||||| || |||| ||||||  || || |||| | |||| ||| ||||||||||| ||     
T  24949626 ataatactccctccggtcctatttacaagagaaaattgactttttagatacattgaataatgtatgtatctagtcaagaacataaaccaaatacataaat 24949725  T
Q  385 tattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    |||| |||| ||| |||||||||||||| | || || |||||||||||||||    
T  24949726 tatttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggga 24949777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 305 - 405
Target Start/End: Complemental strand, 1158379 - 1158278
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaaaa 403  Q
    |||||| |||||| | || |||||||| || |||| |||||||||| ||  | | |||||| ||||||| |||||||||| ||||||||||||| |||||    
T  1158379 tatttacaagaaataattgactttttaaatacattgaataattgatgtatttggtctagaatatagaccgaatacattaattattcaatgaatctaaaaa 1158280  T
Q  404 gt 405  Q
    ||    
T  1158279 gt 1158278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 296 - 436
Target Start/End: Complemental strand, 33859633 - 33859492
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaa-tagaccaaatacattaactattcaatga 394  Q
    ||||| || |||||| |||| ||||||||||||||| || |||  ||||||  || || |||| | ||||| || ||||||||||| || |||| ||||     
T  33859633 ctccggtcctatttacaagagaaagttaactttttagatacatcgaataatgtatgtatctagtcaagaaactaaaccaaatacataaattatttaatgt 33859534  T
Q  395 atcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||| |||||||||||||| | || || ||||||||| |||||    
T  33859533 atctaaaaagtaaattgtctattgtaaataggaccgaaggga 33859492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 289 - 436
Target Start/End: Original strand, 390803 - 390951
Alignment:
Q  289 atactttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaa-tagaccaaatacattaactat 387  Q
    ||||| |||||| ||  |||||||||| |||||| | |||||| || |||| ||||||  || || |||| | ||||  || ||||||||||| || |||    
T  390803 atactatctccggtccaatttataagataaagttgattttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattat 390902  T
Q  388 tcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    | |||| ||| |||||||||||||| | || || |||||||||||||||    
T  390903 ttaatgtatctaaaaagtaaattgtctcttgtaaataggaccggaggga 390951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 432
Target Start/End: Complemental strand, 17265855 - 17265727
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaaaa 403  Q
    ||||||||||||||| || | |||||| ||||||  | |||||||| || || | |||||| |||||| |||||| | |  ||| |||||||||||||||    
T  17265855 tatttataagaaaaatttgattttttaaattcatcgagtaattgatgtatcttgtctagaatatagactaaatacgtcatttatgcaatgaatcaaaaaa 17265756  T
Q  404 gtaaattgttttttatatataggaccgga 432  Q
    || || ||||| ||||| |||||| ||||    
T  17265755 gtcaaatgtttcttataaataggatcgga 17265727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 366 - 410
Target Start/End: Original strand, 20703476 - 20703520
Alignment:
Q  366 atagaccaaatacattaactattcaatgaatcaaaaaagtaaatt 410  Q
    |||||||||||||||||| ||||||||||| |||||| |||||||    
T  20703476 atagaccaaatacattaaatattcaatgaaccaaaaatgtaaatt 20703520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 432
Target Start/End: Complemental strand, 14931326 - 14931264
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccgga 432  Q
    ||||||||||| || |||| |||| ||| |||||||||||||| | ||||| |||||||||||    
T  14931326 accaaatacataaattatttaatgtatctaaaaagtaaattgtctcttataaataggaccgga 14931264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 366 - 436
Target Start/End: Original strand, 27909051 - 27909121
Alignment:
Q  366 atagaccaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||| ||||||||| || |||||||||||| |||||||| || ||||| || || |||||||| ||||||    
T  27909051 atagatcaaatacatcaattattcaatgaattaaaaaagtcaaatgtttcttgtaaataggaccagaggga 27909121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 297 - 350
Target Start/End: Original strand, 13417421 - 13417474
Alignment:
Q  297 tccgatcttatttataagaaaaagttaactttttatattcatttaataattgat 350  Q
    |||||||||||||| |||| | |||| | |||||| ||||||||||||||||||    
T  13417421 tccgatcttatttacaagatacagttgattttttaaattcatttaataattgat 13417474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 286 - 350
Target Start/End: Original strand, 7649794 - 7649858
Alignment:
Q  286 ataatactttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgat 350  Q
    |||||||||||  || |||||||||||| ||| | ||| ||||||| ||||||| ||||||||||    
T  7649794 ataatactttcctcggtcttatttataataaataattatctttttagattcattgaataattgat 7649858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 370 - 434
Target Start/End: Complemental strand, 22898921 - 22898857
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    |||||||| || || ||||||||| ||| |||||||||||||| | || || |||||||||||||    
T  22898921 accaaatatataaattattcaatgtatctaaaaagtaaattgtctcttgtaaataggaccggagg 22898857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 370 - 430
Target Start/End: Original strand, 34639120 - 34639180
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccg 430  Q
    ||||||||||| || | ||||||| ||| |||||||||||||| | ||||| |||||||||    
T  34639120 accaaatacataaatttttcaatgtatctaaaaagtaaattgtctcttataaataggaccg 34639180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 81; Significance: 8e-38; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 305 - 436
Target Start/End: Original strand, 16521 - 16653
Alignment:
Q  305 tatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaatagaccaaatacattaactattcaatgaatc-aaaaaa 403  Q
    |||||| ||||||||||||| |||||| ||||||| |||||||||| || |||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  16521 tatttacaagaaaaagttaattttttagattcattcaataattgatgtacctagcctagaaatagaccaaatacatcaactattcaatgaatcaaaaaaa 16620  T
Q  404 gtaaattgttttttatatataggaccggaggga 436  Q
     |||||||||| ||||||| | |||||||||||    
T  16621 ttaaattgtttattatatacacgaccggaggga 16653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 364 - 432
Target Start/End: Original strand, 7198 - 7266
Alignment:
Q  364 aaatagaccaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccgga 432  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||| ||||    
T  7198 aaatagaccaaatacatcaactatttaatgaatcaaaaaagtaaattgtttcttatatataggatcgga 7266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 286 - 434
Target Start/End: Complemental strand, 1685 - 1537
Alignment:
Q  286 ataatactttctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctaga-aatagaccaaatacattaac 384  Q
    ||||||||  ||||| |||||||||||||||||| |||| |||||| ||||||| |||||||||| | | ||| |||||  ||||| ||||| ||| |      
T  1685 ataatactccctccggtcttatttataagaaaaaattaattttttagattcattgaataattgatgt-attagtctagagtatagatcaaatgcatcatt 1587  T
Q  385 tattcaatgaatcaaaaaagtaaattgttttttatatataggaccggagg 434  Q
    ||| ||| ||||||||||||| || |||||| |||| |||||||||||||    
T  1586 tatgcaacgaatcaaaaaagtcaaatgttttatataaataggaccggagg 1537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 303 - 430
Target Start/End: Original strand, 16541 - 16669
Alignment:
Q  303 cttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaa-atagaccaaatacattaactattcaatgaatcaaaa 401  Q
    ||||||||||||||||| ||||||||||  ||||||| | ||||||||  | || | |||||| |||||||||||||||||  ||| |||||||||||||    
T  16541 cttatttataagaaaaatttaacttttttaattcattgagtaattgatgcatcttgactagaatatagaccaaatacattatttatacaatgaatcaaaa 16640  T
Q  402 aagtaaattgttttttatatataggaccg 430  Q
    |||| ||  |||| ||||| ||| |||||    
T  16641 aagtcaaacgtttcttataaataagaccg 16669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 296 - 436
Target Start/End: Complemental strand, 29387 - 29246
Alignment:
Q  296 ctccgatcttatttataagaaaaagttaactttttatattcatttaataattgatttaactagcctagaaa-tagaccaaatacattaactattcaatga 394  Q
    ||||| || |||||| |||| |||||| |||||||| || |||| ||||||  || || |||| | ||||  || ||||||||||| || |||| ||||     
T  29387 ctccggtcctatttacaagagaaagttgactttttagatacattgaataatgtatgtatctagtcaagaacctaaaccaaatacataaattatttaatgt 29288  T
Q  395 atcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||| |||||||||||||||| || || |||||||||||||||    
T  29287 atctaaaaagtaaattgtttcttgtaaataggaccggaggga 29246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 378 - 436
Target Start/End: Complemental strand, 3869 - 3811
Alignment:
Q  378 cattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    |||||| ||||||||||||||||||||| |||||||| |||||   |||||||||||||    
T  3869 cattaagtattcaatgaatcaaaaaagtcaattgtttcttataataaggaccggaggga 3811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 366 - 417
Target Start/End: Original strand, 423324 - 423375
Alignment:
Q  366 atagaccaaatacattaactattcaatgaatcaaaaaagtaaattgtttttt 417  Q
    ||||||| ||||||| || ||||||||||||| ||||||| |||||||||||    
T  423324 atagaccgaatacatcaattattcaatgaatctaaaaagtcaattgtttttt 423375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 370 - 436
Target Start/End: Original strand, 492385 - 492451
Alignment:
Q  370 accaaatacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||||| || |||| |||| ||| |||||||||||||||| || || ||||||| |||||||    
T  492385 accaaatacataaattatttaatgtatctaaaaagtaaattgtttcttgtaaataggactggaggga 492451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 375 - 436
Target Start/End: Original strand, 112908 - 112969
Alignment:
Q  375 atacattaactattcaatgaatcaaaaaagtaaattgttttttatatataggaccggaggga 436  Q
    ||||||||| |||||||| |||| ||||||| |||||||| |||| |  |||||||||||||    
T  112908 atacattaattattcaataaatctaaaaagtcaattgtttcttatgttaaggaccggaggga 112969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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