View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF5214-Insertion-1 (Length: 614)
Name: NF5214-Insertion-1
Description: NF5214
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF5214-Insertion-1 |
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Alignment Details
Target: chr8 (Bit Score: 563; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 563; E-Value: 0
Query Start/End: Original strand, 8 - 602
Target Start/End: Complemental strand, 26809771 - 26809182
Alignment:
| Q |
8 |
ttaaggtcagagcggtgatgcaagacgctaggcgagtgcgcattagttaaacaaaaccaaccttactgatcccacacaacaaagatgccgatcattgcag |
107 |
Q |
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| T |
26809771 |
ttaaggtcagagcggtgatgcaagacgctaggcgagtgcgcattagttaaacagaaccaaccttactgatcccacacaacaaagatgccgatcattgcag |
26809672 |
T |
|
| Q |
108 |
tcccaagagtttaccatggagaataaagacaaaacaagggacgaatattctaattgacatgaaaacatatagaagcgccaaccatctatttaaccacacg |
207 |
Q |
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| T |
26809671 |
tcccaagagtttaccatggagaataaagacaaaacaagggacgaatattctaattgacatgaaaacatatagaagcgccaaccatctatttaaccacacg |
26809572 |
T |
|
| Q |
208 |
gaatggtgaagttattcacttggcaaatctcagtcaattggatttcaagaagatgcagcaagtaggtatctatattttatctatccaccattcaacttca |
307 |
Q |
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| T |
26809571 |
gaatggtgaagttattcacttggcaaatctcagtcaattggatttcaagaagatgcagcaagtcggtatctatattttatctatccaccattcaacttca |
26809472 |
T |
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| Q |
308 |
ccaattcaaaaggaggatgagcaaaaatgcaagacatttcaagtgtgcgtgtttagttaaatagaatcaacctttttgattccacaaatccaagatgtcg |
407 |
Q |
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| T |
26809471 |
ccaattcaaaaggaggatgagcaaaaatgcaagacatttcaagtgtgcgtgtttagttaaatagaatcaacctttttgattccacaaatccaagatgtcg |
26809372 |
T |
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| Q |
408 |
gtcattgcagccccaatagcgtaccatggaaactacagacgtaacaaggagaaacattgcaatcaacatgcaaacatttggaaccagcaatcatcaattt |
507 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
26809371 |
gtcattgcagccccaa-----taccatggaaactacagacgtaacaaggagaaacattgcaatcaacatgcaaacgtttggaaccagcaatcatcaattt |
26809277 |
T |
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| Q |
508 |
aaccacacagaatggcgagaagcagacactacatgcagttagttactaatcaaattccaattttgattcgatttcatggaggtgcagcaagtcaa |
602 |
Q |
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| T |
26809276 |
aaccacacagaatggcgagaagcagacactacatgcagttagttactaatcaaattccaattttgattcgatttcatggaggtgcagcaagtcaa |
26809182 |
T |
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